Rw6G007350

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
12070538 .. 12071713
1176 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G007350.1

Sequence Viewer

Length: 1176 bp
ATGGAAACCAAACCTCATCCGCATCTTCATATTTTCTTCCTTCCATTTATGGCTCAAGGCCACACTTTACCCATGATAGACATTGCCAAACTATTTGCTTCACGCGGTGTAAAATGCACCATAGTAACCACCCCTGCCAATGCACCAATCATCTCCAAAGCAATCCAAACTAGCAAAGGTTTCGATTTTGAAATTGAAGTTGTTGTCATCAAATTCCCATCTGCTGAAGTTGGGTTGCCTGAAGGAATTGAAAGTACTAAATTGGAGAAGACAGAAGAGATGAGGGAAAAGTTCATAAAAGCAATCACTCTGTTTGAACAACAGGTAGAGAAAATTCTAGACCAACATCGTCCTCATTGCCTTGTTGCAGACTTTTTATTTCATTGGGCTTCAAATGTTGCTGCAAAGTTTGGGATCCCAAGGTTCGTCTTTCATGGAGCTGGTTTTTTTGCCTTGTGTAGTCTAAAGAGTGTAATGATGTACCAACCTCACATGAAGGTTTCATCAGATTCAGAATCTTTTGTTATTCCTAGTCTCCCAGATGAGATAATTATGACAAGAAACCAGCTAGCACCTTTTCTTACTCGAAATGGTAAGACAGAACTCATCAAGCTAATCAAAGCATCCAGAGAAGCTGAGGAAAGGAGCTACGGAATTATTGTAAACAGCTACTATGAACTTGAACCTGATTATGCAGATCACTATAGGAAGGTGTTGGGGAAGAAGTCATGGCATATCGGCCCAGTCTCTTTATGCAACAAGGTAGAAAAAGATAAATCAGAGAGGGGAAGGGAAGGTTCAGTTGATGAAGTACATGAGTGCTTGAACTGGCTTAATTCCAAGAAACCCAATTCGGTTGTTTATATATGTTTTGGAAGTATGACCAAATTCAGTGATTGTCAGCTCATAGAAATTGCCTTCGGTCTTGAGGCTTCTCAGCAGCAATTCATTTGGGTTGTGAATAAAGAAAATAATGATCAAGAAGAGTGGTTACCTGAAGGATTTAAGCAGAGAAATGAGGGTAAGGGACTGGTTATAAGAGGTTGGGCTCCCCAACTACTGCTTCTTCAAAATGAAGCAGTTGGGGCCTTTGTCACTCGTTGTGGGTGGAACTCAATCCTTGAAGGGGTGTCTTCTGGGGTTCCAATGATCACCTGGCCAGTGTCTGCAGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

391

Amino Acids

44.21

Weight (kDa)

6.33

Isoelectric Point (pI)

37.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 274 - 391 2.9e-16 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1037
AccII CGCG 1 cut(s) 105
AciI CCGC 2 cut(s) 20, 105
AclWI GGATC 2 cut(s) 409, 422
AcoI YGGCCR 1 cut(s) 1157
AcsI RAATTY 3 cut(s) 212, 333, 887
AcuI CTGAAG 3 cut(s) 246, 261, 1017
AdeI CACNNNGTG 1 cut(s) 107
AfaI GTAC 3 cut(s) 256, 482, 813
AfiI CCNNNNNNNGG 1 cut(s) 1126
AgsI TTSAA 9 cut(s) 191, 197, 251, 317, 393, 683, 826, 1070, 1124
AjnI CCWGG 1 cut(s) 1154
AjuI GAANNNNNNNTTGG 2 cut(s) 1047, 1079
AluBI AGCT 7 cut(s) 440, 568, 613, 635, 648, 669, 904
AluI AGCT 7 cut(s) 440, 568, 613, 635, 648, 669, 904
Alw26I GTCTC 2 cut(s) 539, 751
AlwI GGATC 2 cut(s) 409, 422
AlwNI CAGNNNCTG 1 cut(s) 1166
AoxI GGCC 4 cut(s) 58, 739, 1086, 1157
ApeKI GCWGC 2 cut(s) 401, 940
ApoI RAATTY 3 cut(s) 212, 333, 887
AspS9I GGNCC 2 cut(s) 740, 1086
AsuHPI GGTGA 1 cut(s) 1144
AsuNHI GCTAGC 1 cut(s) 568
BalI TGGCCA 1 cut(s) 1159
BamHI GGATCC 1 cut(s) 414
BanII GRGCYC 1 cut(s) 1051
BarI GAAGNNNNNNTAC 2 cut(s) 975, 1007
BbsI GAAGAC 2 cut(s) 275, 1125
BbvCI CCTCAGC 1 cut(s) 636
BbvI GCAGC 2 cut(s) 388, 952
BccI CCATC 1 cut(s) 226
BcgI CGANNNNNNTGC 2 cut(s) 163, 197
BciT130I CCWGG 1 cut(s) 1156
BclI TGATCA 2 cut(s) 976, 1149
BcoDI GTCTC 2 cut(s) 539, 751
BfaI CTAG 5 cut(s) 171, 338, 531, 569, 1174
BfmI CTRYAG 2 cut(s) 703, 1167
BisI GCNGC 2 cut(s) 402, 941
BlsI GCNGC 2 cut(s) 403, 942
BmcAI AGTACT 1 cut(s) 256
Bme1390I CCNGG 1 cut(s) 1156
BmgT120I GGNCC 2 cut(s) 740, 1086
BmiI GGNNCC 4 cut(s) 416, 1050, 1087, 1143
BmrFI CCNGG 1 cut(s) 1156
BmrI ACTGGG 1 cut(s) 737
BmsI GCATC 2 cut(s) 31, 632
BmtI GCTAGC 1 cut(s) 572
BmuI ACTGGG 1 cut(s) 737
BpiI GAAGAC 2 cut(s) 275, 1125
Bpu10I CCTNAGC 1 cut(s) 636
BpuEI CTTGAG 2 cut(s) 39, 947
BsaJI CCNNGG 1 cut(s) 419
Bsc4I CCNNNNNNNGG 1 cut(s) 1126
Bse1I ACTGG 4 cut(s) 743, 833, 1035, 1160
Bse3DI GCAATG 2 cut(s) 81, 355
BseBI CCWGG 1 cut(s) 1156
BseDI CCNNGG 1 cut(s) 419
BseGI GGATG 2 cut(s) 16, 623
BseLI CCNNNNNNNGG 1 cut(s) 1126
BseMI GCAATG 2 cut(s) 81, 355
BseMII CTCAG 2 cut(s) 627, 950
BseNI ACTGG 4 cut(s) 743, 833, 1035, 1160
BseXI GCAGC 2 cut(s) 388, 952
Bsh1236I CGCG 1 cut(s) 105
BshFI GGCC 4 cut(s) 60, 741, 1088, 1159
BslFI GGGAC 1 cut(s) 1041
BslI CCNNNNNNNGG 1 cut(s) 1126
BsmAI GTCTC 2 cut(s) 539, 751
BsmFI GGGAC 1 cut(s) 1041
BsnI GGCC 4 cut(s) 60, 741, 1088, 1159
Bsp1286I GDGCHC 1 cut(s) 1051
Bsp143I GATC 4 cut(s) 414, 697, 976, 1149
BspACI CCGC 2 cut(s) 20, 105
BspANI GGCC 4 cut(s) 60, 741, 1088, 1159
BspCNI CTCAG 2 cut(s) 628, 949
BspFNI CGCG 1 cut(s) 105
BspLI GGNNCC 4 cut(s) 416, 1050, 1087, 1143
BspMAI CTGCAG 1 cut(s) 1171
BspOI GCTAGC 1 cut(s) 572
BspPI GGATC 2 cut(s) 409, 422
BsrDI GCAATG 2 cut(s) 81, 355
BsrI ACTGG 4 cut(s) 743, 833, 1035, 1160
BssECI CCNNGG 1 cut(s) 419
BssMI GATC 4 cut(s) 414, 697, 976, 1149
BssT1I CCWWGG 1 cut(s) 419
Bst2UI CCWGG 1 cut(s) 1156
Bst6I CTCTTC 2 cut(s) 270, 978
BstC8I GCNNGC 1 cut(s) 570
BstDEI CTNAG 2 cut(s) 636, 936
BstEII GGTNACC 1 cut(s) 990
BstF5I GGATG 2 cut(s) 16, 623
BstFNI CGCG 1 cut(s) 105
BstKTI GATC 4 cut(s) 417, 700, 979, 1152
BstMAI GTCTC 2 cut(s) 539, 751
BstMBI GATC 4 cut(s) 414, 697, 976, 1149
BstMWI GCNNNNNNNGC 1 cut(s) 1085
BstNI CCWGG 1 cut(s) 1156
BstPI GGTNACC 1 cut(s) 990
BstSCI CCNGG 1 cut(s) 1154
BstSFI CTRYAG 2 cut(s) 703, 1167
BstUI CGCG 1 cut(s) 105
BstV1I GCAGC 2 cut(s) 388, 952
BstV2I GAAGAC 2 cut(s) 275, 1125
BstX2I RGATCY 1 cut(s) 414
BstYI RGATCY 1 cut(s) 414
BsuRI GGCC 4 cut(s) 60, 741, 1088, 1159
BtsCI GGATG 2 cut(s) 16, 623
BtsIMutI CAGTG 2 cut(s) 898, 1167
Cac8I GCNNGC 1 cut(s) 570
CaiI CAGNNNCTG 1 cut(s) 1166
Cfr13I GGNCC 2 cut(s) 740, 1086
Csp6I GTAC 3 cut(s) 255, 481, 812
CspCI CAANNNNNGTGG 2 cut(s) 968, 1003
CviAII CATG 5 cut(s) 73, 434, 493, 729, 815
CviQI GTAC 3 cut(s) 255, 481, 812
DdeI CTNAG 2 cut(s) 636, 936
DpnI GATC 4 cut(s) 416, 699, 978, 1151
DpnII GATC 4 cut(s) 414, 697, 976, 1149
DraIII CACNNNGTG 1 cut(s) 107
EaeI YGGCCR 1 cut(s) 1157
Eam1104I CTCTTC 2 cut(s) 270, 978
EarI CTCTTC 2 cut(s) 270, 978
Eco130I CCWWGG 1 cut(s) 419
Eco24I GRGCYC 1 cut(s) 1051
Eco57I CTGAAG 3 cut(s) 246, 261, 1017
Eco91I GGTNACC 1 cut(s) 990
EcoO109I RGGNCCY 1 cut(s) 1086
EcoO65I GGTNACC 1 cut(s) 990
EcoRII CCWGG 1 cut(s) 1154
EcoT14I CCWWGG 1 cut(s) 419
EcoT38I GRGCYC 1 cut(s) 1051
ErhI CCWWGG 1 cut(s) 419
FaeI CATG 5 cut(s) 76, 437, 496, 732, 818
FaqI GGGAC 1 cut(s) 1041
FatI CATG 5 cut(s) 72, 433, 492, 728, 814
FbaI TGATCA 2 cut(s) 976, 1149
Fnu4HI GCNGC 2 cut(s) 402, 941
FokI GGATG 2 cut(s) 3, 610
FriOI GRGCYC 1 cut(s) 1051
Fsp4HI GCNGC 2 cut(s) 402, 941
FspBI CTAG 5 cut(s) 171, 338, 531, 569, 1174
GluI GCNGC 2 cut(s) 402, 941
HaeIII GGCC 4 cut(s) 60, 741, 1088, 1159
Hin1II CATG 5 cut(s) 76, 437, 496, 732, 818
HinfI GANTC 2 cut(s) 509, 515
HphI GGTGA 1 cut(s) 1144
Hpy166II GTNNAC 1 cut(s) 664
Hpy188I TCNGA 3 cut(s) 508, 514, 781
Hpy188III TCNNGA 4 cut(s) 338, 627, 926, 980
Hpy8I GTNNAC 1 cut(s) 664
HpyAV CCTTC 9 cut(s) 50, 236, 490, 703, 783, 788, 928, 992, 1118
HpyCH4V TGCA 7 cut(s) 117, 143, 368, 404, 695, 756, 1169
HpyF10VI GCNNNNNNNGC 1 cut(s) 1085
HpyF3I CTNAG 2 cut(s) 636, 936
Hsp92II CATG 5 cut(s) 76, 437, 496, 732, 818
Ksp22I TGATCA 2 cut(s) 976, 1149
Kzo9I GATC 4 cut(s) 414, 697, 976, 1149
LmnI GCTCC 3 cut(s) 437, 645, 1054
Lsp1109I GCAGC 2 cut(s) 388, 952
LweI GCATC 2 cut(s) 31, 632
MaeI CTAG 5 cut(s) 171, 338, 531, 569, 1174
MaeIII GTNAC 3 cut(s) 124, 990, 1093
MalI GATC 4 cut(s) 416, 699, 978, 1151
MboI GATC 4 cut(s) 414, 697, 976, 1149
MboII GAAGA 8 cut(s) 17, 28, 280, 287, 733, 995, 1058, 1125
MflI RGATCY 1 cut(s) 414
MhlI GDGCHC 1 cut(s) 1051
MlsI TGGCCA 1 cut(s) 1159
MluNI TGGCCA 1 cut(s) 1159
MnlI CCTC 9 cut(s) 24, 276, 363, 498, 631, 777, 922, 1012, 1034
Mox20I TGGCCA 1 cut(s) 1159
MscI TGGCCA 1 cut(s) 1159
MseI TTAA 2 cut(s) 834, 1005
Msp20I TGGCCA 1 cut(s) 1159
MspR9I CCNGG 1 cut(s) 1156
MvaI CCWGG 1 cut(s) 1156
MvnI CGCG 1 cut(s) 105
MwoI GCNNNNNNNGC 1 cut(s) 1085
NdeII GATC 4 cut(s) 414, 697, 976, 1149
NheI GCTAGC 1 cut(s) 568
NlaIII CATG 5 cut(s) 76, 437, 496, 732, 818
NlaIV GGNNCC 4 cut(s) 416, 1050, 1087, 1143
NmuCI GTSAC 1 cut(s) 1093
PfeI GAWTC 2 cut(s) 509, 515
PkrI GCNGC 2 cut(s) 403, 942
PsiI TTATAA 1 cut(s) 1037
Psp6I CCWGG 1 cut(s) 1154
PspEI GGTNACC 1 cut(s) 990
PspGI CCWGG 1 cut(s) 1154
PspN4I GGNNCC 4 cut(s) 416, 1050, 1087, 1143
PspPI GGNCC 2 cut(s) 740, 1086
PstI CTGCAG 1 cut(s) 1171
PstNI CAGNNNCTG 1 cut(s) 1166
PsuI RGATCY 1 cut(s) 414
RsaI GTAC 3 cut(s) 256, 482, 813
RsaNI GTAC 3 cut(s) 255, 481, 812
SaqAI TTAA 2 cut(s) 834, 1005
SatI GCNGC 2 cut(s) 402, 941
Sau3AI GATC 4 cut(s) 414, 697, 976, 1149
Sau96I GGNCC 2 cut(s) 740, 1086
ScaI AGTACT 1 cut(s) 256
ScrFI CCNGG 1 cut(s) 1156
SduI GDGCHC 1 cut(s) 1051
SfaNI GCATC 2 cut(s) 31, 632
SfcI CTRYAG 2 cut(s) 703, 1167
SmlI CTYRAG 2 cut(s) 54, 926
SmoI CTYRAG 2 cut(s) 54, 926
SsiI CCGC 2 cut(s) 20, 105
SspMI CTAG 5 cut(s) 171, 338, 531, 569, 1174
StyD4I CCNGG 1 cut(s) 1154
StyI CCWWGG 1 cut(s) 419
TaqI TCGA 2 cut(s) 183, 586
TaqII GACCGA 1 cut(s) 911
TatI WGTACW 2 cut(s) 254, 811
TfiI GAWTC 2 cut(s) 509, 515
Tru1I TTAA 2 cut(s) 834, 1005
Tru9I TTAA 2 cut(s) 834, 1005
TscAI CASTG 2 cut(s) 898, 1167
TseFI GTSAC 1 cut(s) 1093
TseI GCWGC 2 cut(s) 401, 940
Tsp45I GTSAC 1 cut(s) 1093
TspGWI ACGGA 1 cut(s) 666
TspRI CASTG 2 cut(s) 898, 1167
XapI RAATTY 3 cut(s) 212, 333, 887
XbaI TCTAGA 1 cut(s) 337
XcmI CCANNNNNNNNNTGG 1 cut(s) 1152
XspI CTAG 5 cut(s) 171, 338, 531, 569, 1174
ZrmI AGTACT 1 cut(s) 256
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.