Rorug05G0564000

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000135
Physical Location & Seq
Forward (+)
75548396 .. 75550817
2422 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0564000.1

Sequence Viewer

Length: 2379 bp
ATGGCTTTTCATCTTCTATACCTTCTTTGCTTCATCCTTCTCGCGCTTCTCCCTTGTTCCACCATGGCTCAAACGTCGAAAAACATATCCTTAGGCTCATCCCTCACTGCACAAAACGACGATAACTCCTCCTGGCCATCCCCATCTGGTGAGTTTGCTTTTGGTTTTCGACAGATTGAGAAAGATGGTTTCTTACTAGCCATCTGGTTCGATAAAATACCAGAGAGAACAATCGTGTGGTCAGCCAATAGGGACAGTCTTGTGCCACAAGGATCAAAAGTTGAGCTCACCAGTGGTGGCCGATTTGTGCTCAATGATGCAAAGGGCAGTCAAATATGGTCTGCCAATTCTTCTAGTACCGGAGTTTCCTATGCAGCTATGCTCGACACCGGAAATTTTGTGCTGGCTAACCGAAACTCCACCTACTTGTGGGAGAGTTTTGATCACCCAACTGACACAATGCTTCCCACACAGAGTCTACAACAAAGTGGCAAACTTTTTGCTCGCTACACGGTGACAAACTACTCGACAGGTAGATTCATGTTTTCACTACAACCTGATGGAAATCCCATGCTTTACACAACAAATTTCCCTCAAGATTCTGCCAATTTCGCATATTGGTCAGTCAAAAATACTGAAATTGGATTTCAAGTCATCTTCAATCAGTCTGGCCTTATTTACCTTACCTCGGAGAATGGGACCATACTTGATACAATATCAGGCAAGCCCATTGCAACGCAAGATTTCTATCAGAGGGCAGCACTCGACTATGATGGAGTTTTGAGGCACTATGTTTACCCTAAAAGCAGCAGCACAAGCGGGGAAAGGTGGCCTATGGCTTGGTCTACTTCCTCTTTCATACCGCCAAATATCTCTTTGTCAATTGTCGAAAAGGTAGGAATCGGTGCGTGTGGGTTCAACAGCTTGTATAGGATTGATAATACTTGTGAATGTCCAACTGGTTACAGTCCAATTGATCCAAATGATGAGCACAAAGGATGCAAACAGGACTTCGTTCCACAAAGCTGCAACGCACCGGCGGATGATTTTGACTTTCAAGAGGTGCCAAACACAAATTTTGCGGGTTTGGATTATGAACAATTTCGAGGGATGGCTGAGGATCGGTGCAGACAGAATTGCCTAGACGATTGCTTTTGTGCTGTTGCCATTTCCAATGCCGCCGGAGAGTGTTATATGAAGGGACTCCCTTTTGTGAATGGGTCGATTGATTCTAGTATTTATGGGACGAAAGCTCTTGTCAAATTTAGGAAACACAATTCTACTTCAAAAAAGAAAGATGATTCAACTTTGATCATTGTTGGATCAGTGCTCCTTAGTAGCTTGGGCATTCTGAACTTCATCTTACCTCTGATCACATATGTGGTTGTTTCTCGAATGTATTCTAGAAAAGCTGTGCCGGTTCATCCTAATTACCAAGGCATGAACTTGAAGTATTTCACTTATGAGGAGCTAAAAGAAGCTACGAATGAGTTCAAGGAAGAACTAGGCCGCGGTGCTTCTGCGACAGTTTTCAAAGGAGTTTTAGCGTGTGACGAGGGAAAATGTGTTGCAGTCAAAATTTTAGACGCGAAGCAGGTTAGAGAAAGTGATTTGGAATTCAATGCTGAAGTGAGAGCAATTGGGAGAACAAATCACAGGAATTTAGTCCAACTACTTGGATTTTGCAACGAGGGGCAGCACCGAATTCTTGTGTATGAGTTTATGAGCAAAGGTACACTAGCAAGCTTCCTTTTCGGAGACACAAGGCCAAGTTGGTACCAAAGAAGGCAAATTGCATTGGGTACTGCCAGAGGGCTCTTGTATTTGCATGAGGAGTGCAGCAGCCAAATTGTACATTGCGACATTAAGCCTCAAAACATTCTTCTAGACGACTCATTCACAGCAAGGATCTCTGATTTTGGATTAGCCAAGCTTTTCAGACTGGACCAGACTCGAACTACTACAGGAATTAGGGGAACAAAAGGGTATGTGGCCCCCGAATGGTTCAAGAACTTACCTATCACAGCAAAGGTGGATGTCTACAGCTTTGGCATTTTGTTGTTAGAGATCATTTGCTGCAGAAAGAAGTTCGACGAAGAAGCAGAAGATGGAGATCAAATGATACTTGCTGACTGGGCATATGACTGCTATAGGCATAAGAAACTACATCTTTTGTTGGAGAAAAATGATGAGGCAATTGAAGACATCAAGATGATGGAGAAGTACGTGAAGATCGCAATGTGGTGCATTCAGGAAAATCCATCACTCCGAACCACCATGAAGAAAACCATTCAAATGCTTGAAGGAACTGTCGAAGTCTCAAAACCACCAGATCCATCTGCTTACAGAAGTTCCATACTTTTAGACCCTGCACATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

792

Amino Acids

88.84

Weight (kDa)

5.83

Isoelectric Point (pI)

37.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 77 - 163 1.8e-20 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 497 - 766 5.9e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 498 - 765 2.7e-49 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1585
Acc65I GGTACC 1 cut(s) 1776
AccB1I GGYRCC 2 cut(s) 1063, 1776
AccI GTMKAC 3 cut(s) 478, 845, 2040
AccII CGCG 3 cut(s) 44, 1512, 1589
AciI CCGC 7 cut(s) 819, 863, 1040, 1082, 1179, 1510, 1512
AclWI GGATC 6 cut(s) 280, 971, 1128, 1330, 1916, 2327
AcoI YGGCCR 2 cut(s) 134, 298
AcsI RAATTY 8 cut(s) 394, 586, 1075, 1262, 1578, 1616, 1660, 1704
AcuI CTGAAG 1 cut(s) 1647
AfaI GTAC 6 cut(s) 358, 1735, 1778, 1804, 1854, 2225
AfiI CCNNNNNNNGG 3 cut(s) 429, 688, 2001
AjnI CCWGG 1 cut(s) 131
AleI CACNNNNGTG 1 cut(s) 1379
Alw21I GWGCWC 4 cut(s) 288, 312, 993, 1332
Alw26I GTCTC 2 cut(s) 1752, 2323
AlwI GGATC 6 cut(s) 280, 971, 1128, 1330, 1916, 2327
AoxI GGCC 7 cut(s) 134, 298, 670, 830, 1507, 1766, 1992
ApeKI GCWGC 9 cut(s) 374, 758, 807, 810, 1026, 1696, 1839, 1842, 2076
ApoI RAATTY 8 cut(s) 394, 586, 1075, 1262, 1578, 1616, 1660, 1704
Asp700I GAANNNNTTC 4 cut(s) 1101, 1399, 1454, 1490
Asp718I GGTACC 1 cut(s) 1776
AspLEI GCGC 1 cut(s) 46
AspS9I GGNCC 3 cut(s) 699, 1945, 1993
AsuHPI GGTGA 4 cut(s) 161, 280, 437, 526
AvaII GGWCC 2 cut(s) 699, 1945
AxyI CCTNAGG 1 cut(s) 91
BalI TGGCCA 1 cut(s) 136
BanI GGYRCC 2 cut(s) 1063, 1776
BanII GRGCYC 2 cut(s) 288, 1818
BbsI GAAGAC 1 cut(s) 2208
Bbv12I GWGCWC 4 cut(s) 288, 312, 993, 1332
BbvCI CCTCAGC 1 cut(s) 1116
BbvI GCAGC 9 cut(s) 386, 770, 819, 822, 1013, 1708, 1851, 1854, 2063
BciT130I CCWGG 1 cut(s) 133
BclI TGATCA 3 cut(s) 442, 1311, 1371
BcoDI GTCTC 2 cut(s) 1752, 2323
BfaI CTAG 8 cut(s) 197, 354, 1142, 1233, 1404, 1505, 1739, 1886
BfmI CTRYAG 4 cut(s) 1962, 2041, 2077, 2149
BfuAI ACCTGC 1 cut(s) 1585
Bme1390I CCNGG 1 cut(s) 133
Bme18I GGWCC 2 cut(s) 699, 1945
BmgT120I GGNCC 3 cut(s) 699, 1945, 1993
BmiI GGNNCC 4 cut(s) 700, 1065, 1778, 1995
BmrFI CCNGG 1 cut(s) 133
BmrI ACTGGG 1 cut(s) 2143
BmsI GCATC 2 cut(s) 307, 989
BmuI ACTGGG 1 cut(s) 2143
BpiI GAAGAC 1 cut(s) 2208
Bpu10I CCTNAGC 1 cut(s) 1116
BpuEI CTTGAG 1 cut(s) 579
BsaAI YACGTR 1 cut(s) 2227
BsaBI GATNNNNATC 3 cut(s) 564, 747, 2112
BsaJI CCNNGG 4 cut(s) 63, 687, 1435, 1510
BsaWI WCCGGW 2 cut(s) 359, 389
BsaXI ACNNNNNCTCC 4 cut(s) 110, 140, 401, 431
Bsc4I CCNNNNNNNGG 3 cut(s) 429, 688, 2001
Bse118I RCCGGY 2 cut(s) 1036, 1417
Bse1I ACTGG 4 cut(s) 291, 964, 1947, 2138
Bse21I CCTNAGG 1 cut(s) 91
Bse3DI GCAATG 3 cut(s) 729, 1855, 2244
Bse8I GATNNNNATC 3 cut(s) 564, 747, 2112
BseBI CCWGG 1 cut(s) 133
BseDI CCNNGG 4 cut(s) 63, 687, 1435, 1510
BseGI GGATG 8 cut(s) 33, 98, 137, 1004, 1048, 1116, 1423, 2041
BseJI GATNNNNATC 3 cut(s) 564, 747, 2112
BseLI CCNNNNNNNGG 3 cut(s) 429, 688, 2001
BseMI GCAATG 3 cut(s) 729, 1855, 2244
BseMII CTCAG 1 cut(s) 1107
BseNI ACTGG 4 cut(s) 291, 964, 1947, 2138
BseRI GAGGAG 3 cut(s) 118, 1481, 1847
BseXI GCAGC 9 cut(s) 386, 770, 819, 822, 1013, 1708, 1851, 1854, 2063
BsgI GTGCAG 4 cut(s) 93, 1147, 1858, 2355
Bsh1236I CGCG 3 cut(s) 44, 1512, 1589
BshFI GGCC 7 cut(s) 136, 300, 672, 832, 1509, 1768, 1994
BshNI GGYRCC 2 cut(s) 1063, 1776
BsiHKAI GWGCWC 4 cut(s) 288, 312, 993, 1332
BsiSI CCGG 5 cut(s) 360, 390, 1037, 1182, 1418
BslFI GGGAC 4 cut(s) 266, 712, 1215, 1258
BslI CCNNNNNNNGG 3 cut(s) 429, 688, 2001
BsmAI GTCTC 2 cut(s) 1752, 2323
BsmFI GGGAC 4 cut(s) 266, 712, 1215, 1258
BsmI GAATGC 2 cut(s) 1347, 2247
BsnI GGCC 7 cut(s) 136, 300, 672, 832, 1509, 1768, 1994
Bsp1286I GDGCHC 5 cut(s) 288, 312, 993, 1332, 1818
Bsp1407I TGTACA 1 cut(s) 1852
Bsp19I CCATGG 1 cut(s) 63
BspACI CCGC 7 cut(s) 819, 863, 1040, 1082, 1179, 1510, 1512
BspANI GGCC 7 cut(s) 136, 300, 672, 832, 1509, 1768, 1994
BspCNI CTCAG 1 cut(s) 1108
BspFNI CGCG 3 cut(s) 44, 1512, 1589
BspLI GGNNCC 4 cut(s) 700, 1065, 1778, 1995
BspMAI CTGCAG 1 cut(s) 2081
BspMI ACCTGC 1 cut(s) 1585
BspPI GGATC 6 cut(s) 280, 971, 1128, 1330, 1916, 2327
BspT107I GGYRCC 2 cut(s) 1063, 1776
BsrDI GCAATG 3 cut(s) 729, 1855, 2244
BsrFI RCCGGY 2 cut(s) 1036, 1417
BsrGI TGTACA 1 cut(s) 1852
BsrI ACTGG 4 cut(s) 291, 964, 1947, 2138
BssAI RCCGGY 2 cut(s) 1036, 1417
BssECI CCNNGG 4 cut(s) 63, 687, 1435, 1510
BssT1I CCWWGG 2 cut(s) 63, 1435
Bst2UI CCWGG 1 cut(s) 133
Bst4CI ACNGT 5 cut(s) 257, 514, 968, 1528, 2311
BstAUI TGTACA 1 cut(s) 1852
BstBAI YACGTR 1 cut(s) 2227
BstC8I GCNNGC 4 cut(s) 405, 505, 725, 1744
BstDEI CTNAG 3 cut(s) 91, 1116, 1334
BstDSI CCRYGG 2 cut(s) 63, 1510
BstF5I GGATG 8 cut(s) 33, 98, 137, 1004, 1048, 1116, 1423, 2041
BstFNI CGCG 3 cut(s) 44, 1512, 1589
BstHHI GCGC 1 cut(s) 46
BstMAI GTCTC 2 cut(s) 1752, 2323
BstMWI GCNNNNNNNGC 3 cut(s) 611, 816, 2135
BstNI CCWGG 1 cut(s) 133
BstSCI CCNGG 1 cut(s) 131
BstSFI CTRYAG 4 cut(s) 1962, 2041, 2077, 2149
BstUI CGCG 3 cut(s) 44, 1512, 1589
BstV1I GCAGC 9 cut(s) 386, 770, 819, 822, 1013, 1708, 1851, 1854, 2063
BstV2I GAAGAC 1 cut(s) 2208
BstX2I RGATCY 2 cut(s) 1908, 2332
BstXI CCANNNNNNTGG 1 cut(s) 1676
BstYI RGATCY 2 cut(s) 1908, 2332
Bsu36I CCTNAGG 1 cut(s) 91
BsuRI GGCC 7 cut(s) 136, 300, 672, 832, 1509, 1768, 1994
BtgI CCRYGG 2 cut(s) 63, 1510
BtsCI GGATG 8 cut(s) 33, 98, 137, 1004, 1048, 1116, 1423, 2041
BtsI GCAGTG 1 cut(s) 105
BtsIMutI CAGTG 3 cut(s) 105, 298, 1332
BveI ACCTGC 1 cut(s) 1585
Cac8I GCNNGC 4 cut(s) 405, 505, 725, 1744
CfoI GCGC 1 cut(s) 46
Cfr10I RCCGGY 2 cut(s) 1036, 1417
Cfr13I GGNCC 3 cut(s) 699, 1945, 1993
Cfr42I CCGCGG 1 cut(s) 1513
CseI GACGC 1 cut(s) 1595
Csp6I GTAC 6 cut(s) 357, 1734, 1777, 1803, 1853, 2224
CviAII CATG 6 cut(s) 64, 541, 571, 1441, 1829, 2278
CviQI GTAC 6 cut(s) 357, 1734, 1777, 1803, 1853, 2224
DdeI CTNAG 3 cut(s) 91, 1116, 1334
EaeI YGGCCR 2 cut(s) 134, 298
EciI GGCGGA 1 cut(s) 1055
Ecl136II GAGCTC 1 cut(s) 286
Eco130I CCWWGG 2 cut(s) 63, 1435
Eco24I GRGCYC 2 cut(s) 288, 1818
Eco47I GGWCC 2 cut(s) 699, 1945
Eco53kI GAGCTC 1 cut(s) 286
Eco57I CTGAAG 1 cut(s) 1647
Eco81I CCTNAGG 1 cut(s) 91
EcoICRI GAGCTC 1 cut(s) 286
EcoRI GAATTC 2 cut(s) 1616, 1704
EcoRII CCWGG 1 cut(s) 131
EcoT14I CCWWGG 2 cut(s) 63, 1435
EcoT38I GRGCYC 2 cut(s) 288, 1818
ErhI CCWWGG 2 cut(s) 63, 1435
FaeI CATG 6 cut(s) 67, 544, 574, 1444, 1832, 2281
FaqI GGGAC 4 cut(s) 266, 712, 1215, 1258
FatI CATG 6 cut(s) 63, 540, 570, 1440, 1828, 2277
FauI CCCGC 2 cut(s) 812, 1075
FauNDI CATATG 2 cut(s) 1378, 2140
FbaI TGATCA 3 cut(s) 442, 1311, 1371
FblI GTMKAC 3 cut(s) 478, 845, 2040
FokI GGATG 8 cut(s) 20, 85, 124, 1011, 1055, 1123, 1410, 2048
FriOI GRGCYC 2 cut(s) 288, 1818
FspBI CTAG 8 cut(s) 197, 354, 1142, 1233, 1404, 1505, 1739, 1886
GlaI GCGC 1 cut(s) 45
HaeIII GGCC 7 cut(s) 136, 300, 672, 832, 1509, 1768, 1994
HapII CCGG 5 cut(s) 360, 390, 1037, 1182, 1418
HgaI GACGC 1 cut(s) 1595
HhaI GCGC 1 cut(s) 46
Hin1II CATG 6 cut(s) 67, 544, 574, 1444, 1832, 2281
Hin6I GCGC 1 cut(s) 44
HinP1I GCGC 1 cut(s) 44
HindIII AAGCTT 2 cut(s) 1744, 1931
HinfI GANTC 9 cut(s) 475, 537, 599, 900, 1203, 1229, 1301, 1892, 1951
HpaII CCGG 5 cut(s) 360, 390, 1037, 1182, 1418
HphI GGTGA 4 cut(s) 161, 280, 437, 526
Hpy166II GTNNAC 5 cut(s) 479, 796, 846, 1736, 2041
Hpy188I TCNGA 8 cut(s) 691, 753, 1353, 1371, 1757, 1915, 1940, 2270
Hpy188III TCNNGA 8 cut(s) 596, 1058, 1392, 1404, 1886, 2008, 2209, 2252
Hpy8I GTNNAC 5 cut(s) 479, 796, 846, 1736, 2041
Hpy99I CGWCG 3 cut(s) 79, 122, 2096
HpyAV CCTTC 5 cut(s) 32, 47, 1192, 1779, 2297
HpyCH4III ACNGT 5 cut(s) 257, 514, 968, 1528, 2311
HpyCH4IV ACGT 2 cut(s) 74, 2226
HpyF10VI GCNNNNNNNGC 3 cut(s) 611, 816, 2135
HpyF3I CTNAG 3 cut(s) 91, 1116, 1334
HpySE526I ACGT 2 cut(s) 74, 2226
Hsp92II CATG 6 cut(s) 67, 544, 574, 1444, 1832, 2281
HspAI GCGC 1 cut(s) 44
KpnI GGTACC 1 cut(s) 1780
Ksp22I TGATCA 3 cut(s) 442, 1311, 1371
KspI CCGCGG 1 cut(s) 1513
LmnI GCTCC 2 cut(s) 1335, 1468
Lsp1109I GCAGC 9 cut(s) 386, 770, 819, 822, 1013, 1708, 1851, 1854, 2063
LweI GCATC 2 cut(s) 307, 989
MaeI CTAG 8 cut(s) 197, 354, 1142, 1233, 1404, 1505, 1739, 1886
MaeII ACGT 2 cut(s) 74, 2226
MaeIII GTNAC 3 cut(s) 514, 962, 1550
MfeI CAATTG 4 cut(s) 882, 972, 1638, 2196
MflI RGATCY 2 cut(s) 1908, 2332
MhlI GDGCHC 5 cut(s) 288, 312, 993, 1332, 1818
MlsI TGGCCA 1 cut(s) 136
MluNI TGGCCA 1 cut(s) 136
MlyI GAGTC 4 cut(s) 484, 1197, 1886, 1945
MmeI TCCRAC 4 cut(s) 980, 1300, 1693, 2157
Mox20I TGGCCA 1 cut(s) 136
MroXI GAANNNNTTC 4 cut(s) 1101, 1399, 1454, 1490
MscI TGGCCA 1 cut(s) 136
MseI TTAA 1 cut(s) 1866
MslI CAYNNNNRTG 3 cut(s) 1379, 2210, 2294
Msp20I TGGCCA 1 cut(s) 136
MspA1I CMGCKG 1 cut(s) 1512
MspI CCGG 5 cut(s) 360, 390, 1037, 1182, 1418
MspR9I CCNGG 1 cut(s) 133
MunI CAATTG 4 cut(s) 882, 972, 1638, 2196
Mva1269I GAATGC 2 cut(s) 1347, 2247
MvaI CCWGG 1 cut(s) 133
MvnI CGCG 3 cut(s) 44, 1512, 1589
MwoI GCNNNNNNNGC 3 cut(s) 611, 816, 2135
NcoI CCATGG 1 cut(s) 63
NdeI CATATG 2 cut(s) 1378, 2140
NlaIII CATG 6 cut(s) 67, 544, 574, 1444, 1832, 2281
NlaIV GGNNCC 4 cut(s) 700, 1065, 1778, 1995
NmuCI GTSAC 2 cut(s) 514, 1550
OliI CACNNNNGTG 1 cut(s) 1379
PctI GAATGC 2 cut(s) 1347, 2247
PdmI GAANNNNTTC 4 cut(s) 1101, 1399, 1454, 1490
PfeI GAWTC 5 cut(s) 537, 599, 900, 1229, 1301
PleI GAGTC 4 cut(s) 483, 1197, 1886, 1945
PpsI GAGTC 4 cut(s) 483, 1197, 1886, 1945
Ppu21I YACGTR 1 cut(s) 2227
Psp124BI GAGCTC 1 cut(s) 288
Psp6I CCWGG 1 cut(s) 131
PspGI CCWGG 1 cut(s) 131
PspN4I GGNNCC 4 cut(s) 700, 1065, 1778, 1995
PspPI GGNCC 3 cut(s) 699, 1945, 1993
PstI CTGCAG 1 cut(s) 2081
PsuI RGATCY 2 cut(s) 1908, 2332
RsaI GTAC 6 cut(s) 358, 1735, 1778, 1804, 1854, 2225
RsaNI GTAC 6 cut(s) 357, 1734, 1777, 1803, 1853, 2224
RseI CAYNNNNRTG 3 cut(s) 1379, 2210, 2294
SacI GAGCTC 1 cut(s) 288
SacII CCGCGG 1 cut(s) 1513
SaqAI TTAA 1 cut(s) 1866
Sau96I GGNCC 3 cut(s) 699, 1945, 1993
SchI GAGTC 4 cut(s) 484, 1197, 1886, 1945
ScrFI CCNGG 1 cut(s) 133
SduI GDGCHC 5 cut(s) 288, 312, 993, 1332, 1818
SfaNI GCATC 2 cut(s) 307, 989
SfcI CTRYAG 4 cut(s) 1962, 2041, 2077, 2149
Sfr303I CCGCGG 1 cut(s) 1513
SgrAI CRCCGGYG 1 cut(s) 1036
SgrBI CCGCGG 1 cut(s) 1513
SinI GGWCC 2 cut(s) 699, 1945
SmiMI CAYNNNNRTG 3 cut(s) 1379, 2210, 2294
SmlI CTYRAG 1 cut(s) 594
SmoI CTYRAG 1 cut(s) 594
SsiI CCGC 7 cut(s) 819, 863, 1040, 1082, 1179, 1510, 1512
SspMI CTAG 8 cut(s) 197, 354, 1142, 1233, 1404, 1505, 1739, 1886
SstI GAGCTC 1 cut(s) 288
StyD4I CCNGG 1 cut(s) 131
StyI CCWWGG 2 cut(s) 63, 1435
TaaI ACNGT 5 cut(s) 257, 514, 968, 1528, 2311
TaiI ACGT 2 cut(s) 77, 2229
TatI WGTACW 1 cut(s) 1852
TauI GCSGC 2 cut(s) 1181, 1512
TfiI GAWTC 5 cut(s) 537, 599, 900, 1229, 1301
Tru1I TTAA 1 cut(s) 1866
Tru9I TTAA 1 cut(s) 1866
TscAI CASTG 3 cut(s) 112, 298, 1332
TseFI GTSAC 2 cut(s) 514, 1550
TseI GCWGC 9 cut(s) 374, 758, 807, 810, 1026, 1696, 1839, 1842, 2076
Tsp45I GTSAC 2 cut(s) 514, 1550
TspDTI ATGAA 9 cut(s) 22, 529, 847, 1110, 1211, 1348, 1412, 1457, 2294
TspRI CASTG 3 cut(s) 112, 298, 1332
VpaK11BI GGWCC 2 cut(s) 699, 1945
XapI RAATTY 8 cut(s) 394, 586, 1075, 1262, 1578, 1616, 1660, 1704
XbaI TCTAGA 2 cut(s) 1403, 1885
XmiI GTMKAC 3 cut(s) 478, 845, 2040
XmnI GAANNNNTTC 4 cut(s) 1101, 1399, 1454, 1490
XspI CTAG 8 cut(s) 197, 354, 1142, 1233, 1404, 1505, 1739, 1886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.