RLG00000014788

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
57526612 .. 57527289
678 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014788

Sequence Viewer

Length: 678 bp
ATGGAAACCAAAGCTCATAAGCAGCTTCACATTTTCTTTCTTCCATTTGTGGGTCCAGGCCACAGTTTACGTCTCTTAGACATTGCCAAACTATTTGCGTCAAGTGGTGTAAAATCCTCCATAATAACCACCCCTGTTAGTGCTGCACTTCTCTCCAAACAACTCCGAACAAGCAAAAGTTTGGGTTCTGGAATTGAATTTCTTGCCATCAAATTCCCATCGGCTGAAGTAGGGTTGCCTGAAGGTATTGAAACTTCGAACTCAGCAACAACCCGAGAAATGAAGGGAAAACTCATGGAAGCTACCGCTCTGCTTGAACCAAAGGTAGAACAGATTCTGGACCAACATCGTCCTCACTGCCTTGTTGCAGATGTTGTATTTCACTGGGCTACAGATGTTGCTACCAAGTTTGGGATTCCGAGGCTCGTCTTTCATGGAGCTGGTTTTTTCCCCTTGTGTGCTTCATTGAGTGTAATGTTGTACCAACCTCACATGAAGATTTCATCTGATTCAGAATCTTTTGTTATTCCTAATCTTCCACATGAGATCAAGAGCACAAGAAACCAAGTACCAGATTTTCTTAATGAGGATTCCAAAACAGAACTCTTCAAGCTGGTCAAAGCATCTATGGAGGTTGACGAAAGGAGCTTTGGGATTTTTGTTAACAACTTCTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

226

Amino Acids

24.9

Weight (kDa)

7.13

Isoelectric Point (pI)

34.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 308
AciI CCGC 1 cut(s) 306
AcsI RAATTY 2 cut(s) 197, 212
AcuI CTGAAG 2 cut(s) 246, 261
AfaI GTAC 2 cut(s) 482, 570
AfiI CCNNNNNNNGG 2 cut(s) 50, 411
AgsI TTSAA 4 cut(s) 197, 251, 317, 610
AjnI CCWGG 1 cut(s) 55
AjuI GAANNNNNNNTTGG 2 cut(s) 633, 665
AluBI AGCT 6 cut(s) 14, 25, 302, 440, 613, 648
AluI AGCT 6 cut(s) 14, 25, 302, 440, 613, 648
Alw21I GWGCWC 1 cut(s) 557
Alw26I GTCTC 1 cut(s) 77
AlwNI CAGNNNCTG 1 cut(s) 337
Ama87I CYCGRG 1 cut(s) 273
AoxI GGCC 1 cut(s) 58
ApeKI GCWGC 2 cut(s) 22, 143
ApoI RAATTY 2 cut(s) 197, 212
Asp700I GAANNNNTTC 1 cut(s) 333
AspS9I GGNCC 2 cut(s) 53, 340
AsuII TTCGAA 1 cut(s) 257
AvaI CYCGRG 1 cut(s) 273
AvaII GGWCC 2 cut(s) 53, 340
BarI GAAGNNNNNNTAC 2 cut(s) 238, 270
Bbv12I GWGCWC 1 cut(s) 557
BbvI GCAGC 2 cut(s) 34, 130
BccI CCATC 2 cut(s) 215, 226
BciT130I CCWGG 1 cut(s) 57
BcoDI GTCTC 1 cut(s) 77
BfmI CTRYAG 1 cut(s) 390
BisI GCNGC 2 cut(s) 23, 144
BlsI GCNGC 2 cut(s) 24, 145
Bme1390I CCNGG 1 cut(s) 57
Bme18I GGWCC 2 cut(s) 53, 340
BmeT110I CYCGRG 1 cut(s) 273
BmgT120I GGNCC 2 cut(s) 53, 340
BmiI GGNNCC 1 cut(s) 54
BmrFI CCNGG 1 cut(s) 57
BmrI ACTGGG 1 cut(s) 394
BmsI GCATC 1 cut(s) 632
BmuI ACTGGG 1 cut(s) 394
Bpu14I TTCGAA 1 cut(s) 257
BsaJI CCNNGG 1 cut(s) 419
Bsc4I CCNNNNNNNGG 2 cut(s) 50, 411
Bse1I ACTGG 1 cut(s) 389
Bse3DI GCAATG 1 cut(s) 81
BseBI CCWGG 1 cut(s) 57
BseDI CCNNGG 1 cut(s) 419
BseLI CCNNNNNNNGG 2 cut(s) 50, 411
BseMI GCAATG 1 cut(s) 81
BseMII CTCAG 1 cut(s) 276
BseNI ACTGG 1 cut(s) 389
BseXI GCAGC 2 cut(s) 34, 130
BsgI GTGCAG 1 cut(s) 129
BshFI GGCC 1 cut(s) 60
BsiHKAI GWGCWC 1 cut(s) 557
BsiHKCI CYCGRG 1 cut(s) 273
BslI CCNNNNNNNGG 2 cut(s) 50, 411
BsmAI GTCTC 1 cut(s) 77
BsmBI CGTCTC 1 cut(s) 77
BsnI GGCC 1 cut(s) 60
BsoBI CYCGRG 1 cut(s) 273
Bsp119I TTCGAA 1 cut(s) 257
Bsp1286I GDGCHC 1 cut(s) 557
Bsp143I GATC 1 cut(s) 546
BspACI CCGC 1 cut(s) 306
BspANI GGCC 1 cut(s) 60
BspCNI CTCAG 1 cut(s) 275
BspLI GGNNCC 1 cut(s) 54
BspT104I TTCGAA 1 cut(s) 257
BsrBI CCGCTC 1 cut(s) 308
BsrDI GCAATG 1 cut(s) 81
BsrI ACTGG 1 cut(s) 389
BssECI CCNNGG 1 cut(s) 419
BssMI GATC 1 cut(s) 546
Bst2UI CCWGG 1 cut(s) 57
Bst4CI ACNGT 1 cut(s) 65
Bst6I CTCTTC 1 cut(s) 611
BstBI TTCGAA 1 cut(s) 257
BstDEI CTNAG 2 cut(s) 76, 262
BstKTI GATC 1 cut(s) 549
BstMAI GTCTC 1 cut(s) 77
BstMBI GATC 1 cut(s) 546
BstNI CCWGG 1 cut(s) 57
BstSCI CCNGG 1 cut(s) 55
BstSFI CTRYAG 1 cut(s) 390
BstV1I GCAGC 2 cut(s) 34, 130
BsuRI GGCC 1 cut(s) 60
BtsI GCAGTG 1 cut(s) 355
BtsIMutI CAGTG 2 cut(s) 355, 382
CaiI CAGNNNCTG 1 cut(s) 337
Cfr13I GGNCC 2 cut(s) 53, 340
CseI GACGC 1 cut(s) 87
Csp6I GTAC 2 cut(s) 481, 569
CviAII CATG 4 cut(s) 295, 434, 493, 542
CviQI GTAC 2 cut(s) 481, 569
DdeI CTNAG 2 cut(s) 76, 262
DpnI GATC 1 cut(s) 548
DpnII GATC 1 cut(s) 546
Eam1104I CTCTTC 1 cut(s) 611
EarI CTCTTC 1 cut(s) 611
Eco47I GGWCC 2 cut(s) 53, 340
Eco57I CTGAAG 2 cut(s) 246, 261
Eco88I CYCGRG 1 cut(s) 273
EcoRII CCWGG 1 cut(s) 55
Esp3I CGTCTC 1 cut(s) 77
FaeI CATG 4 cut(s) 298, 437, 496, 545
FaiI YATR 7 cut(s) 18, 122, 296, 435, 494, 543, 629
FatI CATG 4 cut(s) 294, 433, 492, 541
Fnu4HI GCNGC 2 cut(s) 23, 144
Fsp4HI GCNGC 2 cut(s) 23, 144
GluI GCNGC 2 cut(s) 23, 144
HaeIII GGCC 1 cut(s) 60
HgaI GACGC 1 cut(s) 87
Hin1II CATG 4 cut(s) 298, 437, 496, 545
HincII GTYRAC 2 cut(s) 637, 664
HindII GTYRAC 2 cut(s) 637, 664
HinfI GANTC 5 cut(s) 334, 415, 509, 515, 590
HpaI GTTAAC 1 cut(s) 664
Hpy166II GTNNAC 3 cut(s) 68, 637, 664
Hpy188I TCNGA 4 cut(s) 167, 420, 508, 514
Hpy188III TCNNGA 3 cut(s) 189, 338, 550
Hpy8I GTNNAC 3 cut(s) 68, 637, 664
HpyAV CCTTC 2 cut(s) 236, 277
HpyCH4III ACNGT 1 cut(s) 65
HpyCH4IV ACGT 1 cut(s) 70
HpyCH4V TGCA 2 cut(s) 146, 368
HpyF3I CTNAG 2 cut(s) 76, 262
HpySE526I ACGT 1 cut(s) 70
Hsp92II CATG 4 cut(s) 298, 437, 496, 545
KspAI GTTAAC 1 cut(s) 664
Kzo9I GATC 1 cut(s) 546
LmnI GCTCC 2 cut(s) 437, 645
Lsp1109I GCAGC 2 cut(s) 34, 130
LweI GCATC 1 cut(s) 632
MaeII ACGT 1 cut(s) 70
MalI GATC 1 cut(s) 548
MbiI CCGCTC 1 cut(s) 308
MboI GATC 1 cut(s) 546
MboII GAAGA 4 cut(s) 32, 508, 527, 598
MhlI GDGCHC 1 cut(s) 557
MluCI AATT 3 cut(s) 192, 197, 212
MnlI CCTC 6 cut(s) 127, 363, 414, 498, 580, 625
MroXI GAANNNNTTC 1 cut(s) 333
MseI TTAA 2 cut(s) 582, 663
MspR9I CCNGG 1 cut(s) 57
MvaI CCWGG 1 cut(s) 57
NdeII GATC 1 cut(s) 546
NlaIII CATG 4 cut(s) 298, 437, 496, 545
NlaIV GGNNCC 1 cut(s) 54
NspV TTCGAA 1 cut(s) 257
PdmI GAANNNNTTC 1 cut(s) 333
PfeI GAWTC 5 cut(s) 334, 415, 509, 515, 590
PkrI GCNGC 2 cut(s) 24, 145
Psp6I CCWGG 1 cut(s) 55
PspGI CCWGG 1 cut(s) 55
PspN4I GGNNCC 1 cut(s) 54
PspPI GGNCC 2 cut(s) 53, 340
PstNI CAGNNNCTG 1 cut(s) 337
RsaI GTAC 2 cut(s) 482, 570
RsaNI GTAC 2 cut(s) 481, 569
SaqAI TTAA 2 cut(s) 582, 663
SatI GCNGC 2 cut(s) 23, 144
Sau3AI GATC 1 cut(s) 546
Sau96I GGNCC 2 cut(s) 53, 340
ScrFI CCNGG 1 cut(s) 57
SduI GDGCHC 1 cut(s) 557
SfaNI GCATC 1 cut(s) 632
SfcI CTRYAG 1 cut(s) 390
SfuI TTCGAA 1 cut(s) 257
SinI GGWCC 2 cut(s) 53, 340
Sse9I AATT 3 cut(s) 192, 197, 212
SsiI CCGC 1 cut(s) 306
StyD4I CCNGG 1 cut(s) 55
TaaI ACNGT 1 cut(s) 65
TaiI ACGT 1 cut(s) 73
TaqI TCGA 1 cut(s) 257
TasI AATT 3 cut(s) 192, 197, 212
TfiI GAWTC 5 cut(s) 334, 415, 509, 515, 590
Tru1I TTAA 2 cut(s) 582, 663
Tru9I TTAA 2 cut(s) 582, 663
TscAI CASTG 2 cut(s) 362, 389
TseI GCWGC 2 cut(s) 22, 143
TspDTI ATGAA 5 cut(s) 296, 422, 453, 492, 509
TspRI CASTG 2 cut(s) 362, 389
VpaK11BI GGWCC 2 cut(s) 53, 340
XapI RAATTY 2 cut(s) 197, 212
XmnI GAANNNNTTC 1 cut(s) 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.