RchiOBHm_Chr6g0256471

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000135
Physical Location & Seq
Reverse (-)
11627695 .. 11631924
4230 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ23007

Sequence Viewer

Length: 2973 bp
ATGGAAACTAAATCCCATCAGCAGCTTCACATTTTCTTCTTTCCCTTTATGGCTCAAGGACACAGCGTACCTGCCATAGAGATAGCCAAACAATTTGCTTCTTACTCAGTAAAATGCACCATAATAACCACGCCTCTCAATGCACCACATTTTTCCAAAGCGACCCAAAGAAGGAAAATATTGGGGTTTGATTATGAAATCGAACTTCTACTCCTGAAGTTCCCCTCTGTTGAGGCTGGGTTGCCACAAGAATGTGAGAGTTTTAGCTCGGCTACGACACAAGAGATGGAGCTAAAATTCTTCAAGGCCGTCACTTTGCTTCAACCACAACTTGAGCAGATTTTGGACCAACACCGTCCTCATTGTCTCGTTGCTGATGCCTTGTTTCCTTGGGCTACAAATGTTGCTGCAAAATTTGGAATTCCAAGCCTTCTCTTTCATGGAACCGGTTTTTTCTCATTGTGTGCTTCAATGAGTATGATAATACATCAACCTCACTTGAAGTTGTCATCTGATTCAGAGTCTTTTTCCATTCCTAATTTCCCAGTTGAGATGAAGATGACAGGAAGCCAAATACCAGCTTATTTAAAGCTGAATATTGAAAATGAATTCACCAAGTTGTTTAAATTATCCAAGGACGCTGAGGAAAGGAGCTATGGGGTTATTGTTAACAGCTTCTATGAACTTGAACCAGAATATGCAGATCACTATAGGAAGATGTTTGGGAGGAAGACATGGCATATAGGCCCGGTGTCACTGTACAACAAGGCAGCCAAAGAAAAAGTAGAGAGTGGATGCGTGGAAAGTTCCATTGAGGAAGTGCACCAGTGCTTATATTGGCTTAATTCTAAGAAACCCAAGACAGTTGTTTATGCATGTTTTGGAAGCCTGACCAATTTTAGTGATTCTCAGCTTCTGGAAATTGCAGTGGGGCTAGAGGCTAGCGGGCAAGAGTTCATTTGGGTTGTGAAGAAAGAAGAGAAAGATAAAGAAAAGTGGTTGCCTGAAGGGTTTGAGCAGAGAATGGAAGGTAAAGGACTCATTATAAGAGGCTGGGCTCCCCAAGTGCTGATTCTTGAGCATGAAGCAGTTGGAGGCTTTCTGACTCATTGTGGGTGGAACTCAATCCTTGAAGGAGTGTCTGTTGGTGTACCAATGATCACATGGCCAGTCTCGGCTGAGCAGATTTATAATGAAAAGTTGGTGACTCAGATACTTAGAACTGGTGTTGCTGTTGGTGCTCATCAATGGGGTACAGTTGCAGATGAAAGTGTGAAGATGGAGGCTAGTGTAAAGAGGGAGGCAATAGAAGAGGCTGTGAGTCAAATGATGGTGGGGGATGAAGCATTGGCAATGAGAAGCAGAGCTAAAGAGCTAGGAAAGATGGCAAGGAGGGCAGTTGAAGAAGGCGGTTCATCGTTCAAGGATTTAAGTGCTCTAATTTCTGAGTTGAGTCAATGCCTGATATTATTAATACCCAGTCTATCCGTGTCTATTCTCTTGCAAGTGCCCATGGAAACTAGAACTGATCACCAGCTTCACATTTTCTTCCTTCCATATATGGCTTCAGGCCACACTTTACCCCTCATGGACATAGCCAAACTATTTGCTTCACGTGGTGTAAAAGCCACCATAATAACCACCACTGTCAATGCAACAATTCTATCCAAACCAATACAAACAAGCAAAAATTTGGGTTTTGAAATTGAACTTCTTGTCTTCAAATTCCCATCTGCTGAAGTAGGGTTGCCTGACGGAATTGAAACCTCTAACTCAGCAACAACCCAAGAGATGAAGGAAAAGTTTTTGAAAGCTATGAGTCTGATTGCACCAAAGGTAGAGCAGATTTTAGACCAACATCGCCCTCACTTCCTTGTTGCAGACACTATGTTTCATTGGGCTACTGATGTTGCTGCCAAGTTTGGGATTCCAAGGCTCATCTTTCACGGAACTGGTTTTTTCCCCATGTGTGCTTCAACGAGTGTGATGGAGTACCAACCTCAGTTGAAGGTTTCATCTGATTCAGAATCTTTTGTTATTCCTAATCTCCCAGATGAGATCACAACGACCAGAAACGAAATACCATCTTTTCTTAAAGCAGATGGCAAGACAGAACTCATCAAGTTGGTCAAAGCATCCAGAGAGGCTGAGAAGAAGAGCTATGGAGTTATTGTTAACAGCTTCTATGAACTTGAACGAGATTATGCAGATCACTATAGGAAGGTGTTGGGGATGAAGTCATGGCACGTCGGCCCGGTTTCCTTATGCAACAAGGTAGAGAAAGATAAATCAGAGAGGGGAAGGGGAGGCTCTGTTGATGGAGTACACGAGTGCTTGAATTGGCTCAATTCTAAGACACCCAATTCAGTTGTGTATATATGTTTTGGAAGCCTGACCAATTTCGGTGATTGTCAGCTCCTCGAAATTGCCTTGGCTCTCCAGGCTTCTCACCAGCAATTTATTTGGGTTGTGAAGAAAGAAAAGAATGATAAAGAAATGTGGTTGCCTGAAGACTTTGAGCAGAGAATGGAAGGCAAGGGATTGATTGTAAGAGGTTGGGCTCCCCAACTACTCATTCTTGAGCATGAAGCAGTTGGGGCCTTCGTGACTCATTGTGGGTGGAATTCTATCCTTGAAGGTGTCTGTGCTGGGGTGCCAATGATCACGTGGCCGGTGTCCGGAGAGCAGTTTTACAATGAGAAGTTGGTGACTCAGTTACTTGGGATTGGGGTTGCTGTTGGTGCTAAAAAGTGGGCTGCAGTTGAGGATGATAATGTGAAGAGTGAAGCCAGTGTGAAGAGGGAGGCCATAGAGAAGGCTGTGACGGAAATCATGATGGGTGATGAAGCAGAGGGAATGAGAAACAGAGCTAAAGTGCTCGGAGAGATGGCAAGGAGGGCAGTTATAGAAGGCGGTTCATCGTTCTCGGATTTAACAGCTCTAGTTGAAGAATTGAGGTCCTTTAGGTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

990

Amino Acids

110.66

Weight (kDa)

5.93

Isoelectric Point (pI)

41.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 281 - 404 4.9e-19 UDP-glucoronosyl and UDP-glucosyl transferase
UDPGT PF00201 779 - 905 6.8e-21 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1046, 1191
Acc36I ACCTGC 1 cut(s) 79
AccB1I GGYRCC 1 cut(s) 2653
AccIII TCCGGA 1 cut(s) 2678
AciI CCGC 3 cut(s) 945, 1410, 2913
AcoI YGGCCR 2 cut(s) 1166, 2669
AcsI RAATTY 7 cut(s) 296, 413, 420, 608, 1690, 1724, 2623
AcuI CTGAAG 5 cut(s) 236, 1026, 1551, 1758, 2529
AcvI CACGTG 2 cut(s) 1616, 2667
AdeI CACNNNGTG 1 cut(s) 1619
AfaI GTAC 6 cut(s) 69, 761, 1152, 1255, 1994, 2325
AfiI CCNNNNNNNGG 3 cut(s) 171, 1923, 2678
AgeI ACCGGT 1 cut(s) 446
AjiI CACGTC 1 cut(s) 2248
AjnI CCWGG 1 cut(s) 2439
AjuI GAANNNNNNNTTGG 4 cut(s) 1056, 1088, 2559, 2591
AloI GAACNNNNNNTCC 2 cut(s) 195, 227
Alw21I GWGCWC 4 cut(s) 825, 1243, 1438, 2880
Alw26I GTCTC 2 cut(s) 371, 1177
Alw44I GTGCAC 1 cut(s) 821
AlwNI CAGNNNCTG 1 cut(s) 916
Aor13HI TCCGGA 1 cut(s) 2678
AoxI GGCC 8 cut(s) 306, 745, 1166, 1570, 2251, 2598, 2669, 2805
ApaLI GTGCAC 1 cut(s) 821
ApeKI GCWGC 5 cut(s) 22, 407, 770, 1913, 2756
ApoI RAATTY 7 cut(s) 296, 413, 420, 608, 1690, 1724, 2623
AseI ATTAAT 1 cut(s) 1472
AsiGI ACCGGT 1 cut(s) 446
AspS9I GGNCC 5 cut(s) 346, 746, 2252, 2598, 2958
AsuC2I CCSGG 2 cut(s) 749, 2255
AsuHPI GGTGA 7 cut(s) 604, 1216, 1523, 2417, 2441, 2719, 2852
AsuNHI GCTAGC 1 cut(s) 941
AvaII GGWCC 2 cut(s) 346, 2958
BaeGI GKGCMC 2 cut(s) 825, 1512
BalI TGGCCA 1 cut(s) 1168
BanI GGYRCC 1 cut(s) 2653
BanII GRGCYC 2 cut(s) 1060, 2563
BauI CACGAG 1 cut(s) 2327
BbrPI CACGTG 2 cut(s) 1616, 2667
BbsI GAAGAC 3 cut(s) 737, 1711, 2517
Bbv12I GWGCWC 4 cut(s) 825, 1243, 1438, 2880
BbvCI CCTCAGC 1 cut(s) 642
BbvI GCAGC 5 cut(s) 34, 394, 782, 1900, 2743
BceAI ACGGC 1 cut(s) 293
BciT130I CCWGG 1 cut(s) 2441
BclI TGATCA 3 cut(s) 1158, 1528, 2661
BcnI CCSGG 2 cut(s) 749, 2255
BcoDI GTCTC 2 cut(s) 371, 1177
BfaI CTAG 6 cut(s) 935, 942, 1287, 1376, 1521, 2942
BfmI CTRYAG 3 cut(s) 709, 2215, 2757
BfuAI ACCTGC 1 cut(s) 79
BisI GCNGC 5 cut(s) 23, 408, 771, 1914, 2757
BlpI GCTNAGC 1 cut(s) 1179
BlsI GCNGC 5 cut(s) 24, 409, 772, 1915, 2758
Bme1390I CCNGG 3 cut(s) 749, 2255, 2441
Bme18I GGWCC 2 cut(s) 346, 2958
BmgBI CACGTC 1 cut(s) 2248
BmgT120I GGNCC 5 cut(s) 346, 746, 2252, 2598, 2958
BmiI GGNNCC 5 cut(s) 445, 1059, 2562, 2599, 2655
BmrFI CCNGG 3 cut(s) 749, 2255, 2441
BmrI ACTGGG 2 cut(s) 539, 1473
BmsI GCATC 3 cut(s) 367, 785, 2144
BmtI GCTAGC 1 cut(s) 945
BmuI ACTGGG 2 cut(s) 539, 1473
BpiI GAAGAC 3 cut(s) 737, 1711, 2517
BpmI CTGGAG 1 cut(s) 2423
Bpu10I CCTNAGC 1 cut(s) 642
Bpu1102I GCTNAGC 1 cut(s) 1179
BpuEI CTTGAG 4 cut(s) 39, 353, 1097, 2600
BpuMI CCSGG 2 cut(s) 749, 2255
BsaAI YACGTR 2 cut(s) 1616, 2667
BsaJI CCNNGG 5 cut(s) 389, 633, 1512, 1931, 2430
BsaWI WCCGGW 2 cut(s) 446, 2678
BsaXI ACNNNNNCTCC 8 cut(s) 195, 225, 1128, 1158, 2157, 2187, 2298, 2328
Bsc4I CCNNNNNNNGG 3 cut(s) 171, 1923, 2678
Bse118I RCCGGY 2 cut(s) 446, 2671
Bse1I ACTGG 7 cut(s) 545, 826, 1169, 1228, 1479, 1957, 2790
Bse3DI GCAATG 1 cut(s) 1359
BseAI TCCGGA 1 cut(s) 2678
BseBI CCWGG 1 cut(s) 2441
BseDI CCNNGG 5 cut(s) 389, 633, 1512, 1931, 2430
BseGI GGATG 5 cut(s) 800, 1345, 2135, 2238, 2773
BseLI CCNNNNNNNGG 3 cut(s) 171, 1923, 2678
BseMI GCAATG 1 cut(s) 1359
BseNI ACTGG 7 cut(s) 545, 826, 1169, 1228, 1479, 1957, 2790
BseRI GAGGAG 1 cut(s) 2408
BseSI GKGCMC 2 cut(s) 825, 1512
BseXI GCAGC 5 cut(s) 34, 394, 782, 1900, 2743
BseYI CCCAGC 3 cut(s) 236, 1053, 2648
BshFI GGCC 8 cut(s) 308, 747, 1168, 1572, 2253, 2600, 2671, 2807
BshNI GGYRCC 1 cut(s) 2653
BshTI ACCGGT 1 cut(s) 446
BsiHKAI GWGCWC 4 cut(s) 825, 1243, 1438, 2880
BsiSI CCGG 5 cut(s) 447, 749, 2255, 2672, 2679
BslI CCNNNNNNNGG 3 cut(s) 171, 1923, 2678
BsmAI GTCTC 2 cut(s) 371, 1177
BsnI GGCC 8 cut(s) 308, 747, 1168, 1572, 2253, 2600, 2671, 2807
Bsp1286I GDGCHC 7 cut(s) 825, 1060, 1243, 1438, 1512, 2563, 2880
Bsp13I TCCGGA 1 cut(s) 2678
Bsp1407I TGTACA 1 cut(s) 759
Bsp143I GATC 6 cut(s) 703, 1158, 1528, 2058, 2209, 2661
Bsp1720I GCTNAGC 1 cut(s) 1179
Bsp19I CCATGG 1 cut(s) 1512
BspACI CCGC 3 cut(s) 945, 1410, 2913
BspANI GGCC 8 cut(s) 308, 747, 1168, 1572, 2253, 2600, 2671, 2807
BspEI TCCGGA 1 cut(s) 2678
BspHI TCATGA 1 cut(s) 2832
BspLI GGNNCC 5 cut(s) 445, 1059, 2562, 2599, 2655
BspMAI CTGCAG 1 cut(s) 2761
BspMI ACCTGC 1 cut(s) 79
BspOI GCTAGC 1 cut(s) 945
BspQI GCTCTTC 1 cut(s) 2150
BspT107I GGYRCC 1 cut(s) 2653
BsrDI GCAATG 1 cut(s) 1359
BsrFI RCCGGY 2 cut(s) 446, 2671
BsrGI TGTACA 1 cut(s) 759
BsrI ACTGG 7 cut(s) 545, 826, 1169, 1228, 1479, 1957, 2790
BssAI RCCGGY 2 cut(s) 446, 2671
BssECI CCNNGG 5 cut(s) 389, 633, 1512, 1931, 2430
BssMI GATC 6 cut(s) 703, 1158, 1528, 2058, 2209, 2661
BssSI CACGAG 1 cut(s) 2327
BssT1I CCWWGG 5 cut(s) 389, 633, 1512, 1931, 2430
Bst2BI CACGAG 1 cut(s) 2327
Bst2UI CCWGG 1 cut(s) 2441
Bst4CI ACNGT 5 cut(s) 356, 759, 865, 1258, 1648
Bst6I CTCTTC 5 cut(s) 972, 1305, 2150, 2774, 2792
BstAUI TGTACA 1 cut(s) 759
BstBAI YACGTR 2 cut(s) 1616, 2667
BstC8I GCNNGC 2 cut(s) 943, 947
BstDSI CCRYGG 1 cut(s) 1512
BstF5I GGATG 5 cut(s) 800, 1345, 2135, 2238, 2773
BstKTI GATC 6 cut(s) 706, 1161, 1531, 2061, 2212, 2664
BstMAI GTCTC 2 cut(s) 371, 1177
BstMBI GATC 6 cut(s) 703, 1158, 1528, 2058, 2209, 2661
BstMWI GCNNNNNNNGC 6 cut(s) 1238, 1394, 2441, 2597, 2741, 2897
BstNI CCWGG 1 cut(s) 2441
BstNSI RCATGY 1 cut(s) 879
BstSCI CCNGG 3 cut(s) 747, 2253, 2439
BstSFI CTRYAG 3 cut(s) 709, 2215, 2757
BstSLI GKGCMC 2 cut(s) 825, 1512
BstV1I GCAGC 5 cut(s) 34, 394, 782, 1900, 2743
BstV2I GAAGAC 3 cut(s) 737, 1711, 2517
BsuRI GGCC 8 cut(s) 308, 747, 1168, 1572, 2253, 2600, 2671, 2807
BtgI CCRYGG 1 cut(s) 1512
BtgZI GCGATG 1 cut(s) 1844
BtrI CACGTC 1 cut(s) 2248
BtsCI GGATG 5 cut(s) 800, 1345, 2135, 2238, 2773
BtsI GCAGTG 1 cut(s) 933
BtsIMutI CAGTG 5 cut(s) 755, 833, 933, 1644, 2797
BveI ACCTGC 1 cut(s) 79
Cac8I GCNNGC 2 cut(s) 943, 947
CaiI CAGNNNCTG 1 cut(s) 916
CciI TCATGA 1 cut(s) 2832
Cfr10I RCCGGY 2 cut(s) 446, 2671
Cfr13I GGNCC 5 cut(s) 346, 746, 2252, 2598, 2958
CseI GACGC 1 cut(s) 647
Csp6I GTAC 6 cut(s) 68, 760, 1151, 1254, 1993, 2324
CspAI ACCGGT 1 cut(s) 446
CviQI GTAC 6 cut(s) 68, 760, 1151, 1254, 1993, 2324
DpnI GATC 6 cut(s) 705, 1160, 1530, 2060, 2211, 2663
DpnII GATC 6 cut(s) 703, 1158, 1528, 2058, 2209, 2661
DraI TTTAAA 2 cut(s) 588, 625
DraIII CACNNNGTG 1 cut(s) 1619
EaeI YGGCCR 2 cut(s) 1166, 2669
Eam1104I CTCTTC 5 cut(s) 972, 1305, 2150, 2774, 2792
EarI CTCTTC 5 cut(s) 972, 1305, 2150, 2774, 2792
Eco130I CCWWGG 5 cut(s) 389, 633, 1512, 1931, 2430
Eco24I GRGCYC 2 cut(s) 1060, 2563
Eco47I GGWCC 2 cut(s) 346, 2958
Eco57I CTGAAG 5 cut(s) 236, 1026, 1551, 1758, 2529
Eco72I CACGTG 2 cut(s) 1616, 2667
EcoO109I RGGNCCY 2 cut(s) 2598, 2958
EcoRI GAATTC 3 cut(s) 420, 608, 2623
EcoRII CCWGG 1 cut(s) 2439
EcoT14I CCWWGG 5 cut(s) 389, 633, 1512, 1931, 2430
EcoT22I ATGCAT 1 cut(s) 877
EcoT38I GRGCYC 2 cut(s) 1060, 2563
ErhI CCWWGG 5 cut(s) 389, 633, 1512, 1931, 2430
FauI CCCGC 1 cut(s) 938
FbaI TGATCA 3 cut(s) 1158, 1528, 2661
Fnu4HI GCNGC 5 cut(s) 23, 408, 771, 1914, 2757
FokI GGATG 5 cut(s) 807, 1352, 2122, 2245, 2780
FriOI GRGCYC 2 cut(s) 1060, 2563
Fsp4HI GCNGC 5 cut(s) 23, 408, 771, 1914, 2757
FspBI CTAG 6 cut(s) 935, 942, 1287, 1376, 1521, 2942
GluI GCNGC 5 cut(s) 23, 408, 771, 1914, 2757
GsaI CCCAGC 3 cut(s) 240, 1057, 2652
GsuI CTGGAG 1 cut(s) 2423
HaeIII GGCC 8 cut(s) 308, 747, 1168, 1572, 2253, 2600, 2671, 2807
HapII CCGG 5 cut(s) 447, 749, 2255, 2672, 2679
HgaI GACGC 1 cut(s) 647
HincII GTYRAC 2 cut(s) 670, 2176
HindII GTYRAC 2 cut(s) 670, 2176
HpaI GTTAAC 2 cut(s) 670, 2176
HpaII CCGG 5 cut(s) 447, 749, 2255, 2672, 2679
HphI GGTGA 7 cut(s) 604, 1216, 1523, 2417, 2441, 2719, 2852
Hpy166II GTNNAC 5 cut(s) 670, 823, 1151, 2176, 2326
Hpy188III TCNNGA 8 cut(s) 214, 917, 1076, 2139, 2579, 2605, 2679, 2833
Hpy8I GTNNAC 5 cut(s) 670, 823, 1151, 2176, 2326
Hpy99I CGWCG 1 cut(s) 2252
HpyCH4III ACNGT 5 cut(s) 356, 759, 865, 1258, 1648
HpyCH4IV ACGT 3 cut(s) 1615, 2247, 2666
HpyF10VI GCNNNNNNNGC 6 cut(s) 1238, 1394, 2441, 2597, 2741, 2897
HpySE526I ACGT 3 cut(s) 1615, 2247, 2666
Kpn2I TCCGGA 1 cut(s) 2678
Ksp22I TGATCA 3 cut(s) 1158, 1528, 2661
KspAI GTTAAC 2 cut(s) 670, 2176
Kzo9I GATC 6 cut(s) 703, 1158, 1528, 2058, 2209, 2661
LguI GCTCTTC 1 cut(s) 2150
LmnI GCTCC 5 cut(s) 289, 651, 1063, 2421, 2566
Lsp1109I GCAGC 5 cut(s) 34, 394, 782, 1900, 2743
LweI GCATC 3 cut(s) 367, 785, 2144
MaeI CTAG 6 cut(s) 935, 942, 1287, 1376, 1521, 2942
MaeII ACGT 3 cut(s) 1615, 2247, 2666
MaeIII GTNAC 7 cut(s) 310, 753, 1204, 2605, 2707, 2715, 2821
MalI GATC 6 cut(s) 705, 1160, 1530, 2060, 2211, 2663
MboI GATC 6 cut(s) 703, 1158, 1528, 2058, 2209, 2661
MhlI GDGCHC 7 cut(s) 825, 1060, 1243, 1438, 1512, 2563, 2880
MlsI TGGCCA 1 cut(s) 1168
MluNI TGGCCA 1 cut(s) 1168
MlyI GAGTC 9 cut(s) 530, 1032, 1099, 1201, 1330, 1462, 1828, 2602, 2704
MmeI TCCRAC 1 cut(s) 1072
Mox20I TGGCCA 1 cut(s) 1168
Mph1103I ATGCAT 1 cut(s) 877
MroI TCCGGA 1 cut(s) 2678
MscI TGGCCA 1 cut(s) 1168
MseI TTAA 9 cut(s) 587, 624, 669, 843, 1430, 1472, 2094, 2175, 2933
MslI CAYNNNNRTG 1 cut(s) 250
Msp20I TGGCCA 1 cut(s) 1168
MspI CCGG 5 cut(s) 447, 749, 2255, 2672, 2679
MspR9I CCNGG 3 cut(s) 749, 2255, 2441
MvaI CCWGG 1 cut(s) 2441
MwoI GCNNNNNNNGC 6 cut(s) 1238, 1394, 2441, 2597, 2741, 2897
NciI CCSGG 2 cut(s) 749, 2255
NcoI CCATGG 1 cut(s) 1512
NdeII GATC 6 cut(s) 703, 1158, 1528, 2058, 2209, 2661
NheI GCTAGC 1 cut(s) 941
NlaIV GGNNCC 5 cut(s) 445, 1059, 2562, 2599, 2655
NmeAIII GCCGAG 2 cut(s) 248, 1154
NmuCI GTSAC 6 cut(s) 310, 753, 1204, 2605, 2707, 2821
NsiI ATGCAT 1 cut(s) 877
NspI RCATGY 1 cut(s) 879
PagI TCATGA 1 cut(s) 2832
PciSI GCTCTTC 1 cut(s) 2150
PfeI GAWTC 6 cut(s) 515, 905, 1072, 1927, 2021, 2027
PinAI ACCGGT 1 cut(s) 446
PkrI GCNGC 5 cut(s) 24, 409, 772, 1915, 2758
PleI GAGTC 9 cut(s) 529, 1032, 1099, 1201, 1329, 1461, 1827, 2602, 2704
PmaCI CACGTG 2 cut(s) 1616, 2667
PmlI CACGTG 2 cut(s) 1616, 2667
PpsI GAGTC 9 cut(s) 529, 1032, 1099, 1201, 1329, 1461, 1827, 2602, 2704
Ppu21I YACGTR 2 cut(s) 1616, 2667
PpuMI RGGWCCY 1 cut(s) 2958
PshBI ATTAAT 1 cut(s) 1472
PsiI TTATAA 2 cut(s) 1046, 1191
Psp5II RGGWCCY 1 cut(s) 2958
Psp6I CCWGG 1 cut(s) 2439
PspCI CACGTG 2 cut(s) 1616, 2667
PspFI CCCAGC 3 cut(s) 236, 1053, 2648
PspGI CCWGG 1 cut(s) 2439
PspN4I GGNNCC 5 cut(s) 445, 1059, 2562, 2599, 2655
PspPI GGNCC 5 cut(s) 346, 746, 2252, 2598, 2958
PspPPI RGGWCCY 1 cut(s) 2958
PstI CTGCAG 1 cut(s) 2761
PstNI CAGNNNCTG 1 cut(s) 916
RsaI GTAC 6 cut(s) 69, 761, 1152, 1255, 1994, 2325
RsaNI GTAC 6 cut(s) 68, 760, 1151, 1254, 1993, 2324
RseI CAYNNNNRTG 1 cut(s) 250
SapI GCTCTTC 1 cut(s) 2150
SaqAI TTAA 9 cut(s) 587, 624, 669, 843, 1430, 1472, 2094, 2175, 2933
SatI GCNGC 5 cut(s) 23, 408, 771, 1914, 2757
Sau3AI GATC 6 cut(s) 703, 1158, 1528, 2058, 2209, 2661
Sau96I GGNCC 5 cut(s) 346, 746, 2252, 2598, 2958
SchI GAGTC 9 cut(s) 530, 1032, 1099, 1201, 1330, 1462, 1828, 2602, 2704
ScrFI CCNGG 3 cut(s) 749, 2255, 2441
SduI GDGCHC 7 cut(s) 825, 1060, 1243, 1438, 1512, 2563, 2880
SfaNI GCATC 3 cut(s) 367, 785, 2144
SfcI CTRYAG 3 cut(s) 709, 2215, 2757
SinI GGWCC 2 cut(s) 346, 2958
SmiMI CAYNNNNRTG 1 cut(s) 250
SmlI CTYRAG 4 cut(s) 54, 332, 1076, 2579
SmoI CTYRAG 4 cut(s) 54, 332, 1076, 2579
SsiI CCGC 3 cut(s) 945, 1410, 2913
SspI AATATT 2 cut(s) 180, 598
SspMI CTAG 6 cut(s) 935, 942, 1287, 1376, 1521, 2942
StyD4I CCNGG 3 cut(s) 747, 2253, 2439
StyI CCWWGG 5 cut(s) 389, 633, 1512, 1931, 2430
TaaI ACNGT 5 cut(s) 356, 759, 865, 1258, 1648
TaiI ACGT 3 cut(s) 1618, 2250, 2669
TaqI TCGA 2 cut(s) 201, 2421
TatI WGTACW 2 cut(s) 759, 2323
TfiI GAWTC 6 cut(s) 515, 905, 1072, 1927, 2021, 2027
Tru1I TTAA 9 cut(s) 587, 624, 669, 843, 1430, 1472, 2094, 2175, 2933
Tru9I TTAA 9 cut(s) 587, 624, 669, 843, 1430, 1472, 2094, 2175, 2933
TscAI CASTG 5 cut(s) 762, 833, 933, 1651, 2797
TseFI GTSAC 6 cut(s) 310, 753, 1204, 2605, 2707, 2821
TseI GCWGC 5 cut(s) 22, 407, 770, 1913, 2756
Tsp45I GTSAC 6 cut(s) 310, 753, 1204, 2605, 2707, 2821
TspGWI ACGGA 4 cut(s) 1477, 1770, 1962, 2840
TspRI CASTG 5 cut(s) 762, 833, 933, 1651, 2797
VneI GTGCAC 1 cut(s) 821
VpaK11BI GGWCC 2 cut(s) 346, 2958
VspI ATTAAT 1 cut(s) 1472
XapI RAATTY 7 cut(s) 296, 413, 420, 608, 1690, 1724, 2623
XceI RCATGY 1 cut(s) 879
XcmI CCANNNNNNNNNTGG 2 cut(s) 1161, 2664
XspI CTAG 6 cut(s) 935, 942, 1287, 1376, 1521, 2942
Zsp2I ATGCAT 1 cut(s) 877
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.