MD17G1100000.v1.1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000135
Physical Location & Seq
Reverse (-)
8510660 .. 8512105
1446 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1100000.v1.1.491

Sequence Viewer

Length: 1446 bp
ATGGGTAGCCAAAACCGTGAGTTCCACGTCTTCTTGTTCCCTTTCATGAGTCACGGCCACATGATACCGATCTCAGATATGGCCAAGCTATTCGCAGCGCAAGGAGTGAAGACAACCATAGTCACAACTCCTCTCAACGCTTCAACATTCTACAAAGCCACTCAATCAAGCAAAACCAATTCCGGCAGCGTCAAAGTCGAAATCAAAACCATCAAGTTCCCTTCAGAAGCCGGTCTACCAGATGGTTGTGAGATTCTCGACTCACTCGCTTCACCAGAATTATCCACCAATTTCCTCAAAGCAACAAGCTTGCTCCAAGAACCGCTTGAGCAGCTTCTGCTCGACCAAAACCCTAGTTTCCTTTTGGCTGACATATGTTTTCCATGGGCAACTGATGCAGCTGCAAAGTTTGATATTCCGAGGTTGGTTTTTCATGGCACTAGTTTCTTCGCCTTGGCTGCCTCATATAATATGAGCAAGTATGAGCCTTTCAAGAACAGTTCGTCCGATTTGGAACCTTTTGTGATTCCGAATTTTCCTGGTGAGATTACGATGACAAGAGCCCAAGTGCCTGCTTTTGACAAGGAAAATATTGAAAACGACGTGACCCGGATGCTCAAACGGGCCAAGGAATCTGAGCAGACGAGCTATGGAATTGTTGTGAACAGTTTCTATGAGCTCGAACCGGTTTATGCAGATTATTACAGAAACGTTTTGGGGAGGAAGGCTTGGCATATAGGCCCTGTTTCTCTGTGCAATAGAAGCAATGAAGAAAAAGCATTTAGAGGAAAAGCATCTTCCATCAACGAGCACGATTGCTTGAAGTGGCTTGGTTCAAAAGAACCCAATTCGGTGGTTTATGTGTGTTTTGGAAGCATGGCTAAATTCAATGCCTCTCAGCTTAAGAAGATTGCAATGGGGCTTCAGGCTTCTGGGCAGGACTTCATTTGGGTAGTGAGGAGAGGAAAAGATGATGACATGGAGAAAGAGGATTGGCTGCCAGAAGGGTTTGAGCATAAAATGGAAGGGAAAGGACTAATAATAAGAGGGTGGGCCCCGCAGCTTCTGATTCTTAATCATAGGGCTGTTGGCGGGTTTGTAACTCACTGTGGGTGGAACTCGACGTTGGAAGGCATTGCGGCTGGGTTGCCGATGGTGACGTGGCCGGTGTCGGCGGAGCAGTTTTACAACGAGAAGCTGGTGACCCAAGTGCTGAAAATAGGTGTTGGAGTGGGTGCTCAGAAATGGGTTAGTCTTGTTGGGGATTTCGTTAAGAAGAAAGCTGTTGATAAAGCTGTAAGGAGGATTATGGTGGGTGGGGAAGCAGAGGAAATGAGAAGTAGAGCTTGGGAACTTGCAGATCAGGCAAAGAGGGCTATTGAGAAAGGAGGATCATCAGATTCTGATTTGAATGCCCTAATTGAAGAGTTGAAATCCCGTGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

482

Amino Acids

53.43

Weight (kDa)

6.54

Isoelectric Point (pI)

40.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 282 - 403 4e-19 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 235
AciI CCGC 5 cut(s) 323, 1058, 1092, 1139, 1175
AclI AACGTT 1 cut(s) 711
AclWI GGATC 1 cut(s) 1399
AcoI YGGCCR 3 cut(s) 55, 81, 1163
AcsI RAATTY 2 cut(s) 532, 884
AcuI CTGAAG 2 cut(s) 207, 908
AflII CTTAAG 1 cut(s) 902
AgeI ACCGGT 1 cut(s) 685
AgsI TTSAA 9 cut(s) 144, 493, 596, 823, 837, 889, 1411, 1424, 1432
AhlI ACTAGT 1 cut(s) 440
AjiI CACGTC 3 cut(s) 28, 604, 1161
AjnI CCWGG 1 cut(s) 538
AjuI GAANNNNNNNTTGG 4 cut(s) 1109, 1141, 1330, 1362
AloI GAACNNNNNNTCC 2 cut(s) 488, 520
Alw21I GWGCWC 3 cut(s) 681, 813, 1240
AlwI GGATC 1 cut(s) 1399
AlwNI CAGNNNCTG 3 cut(s) 337, 1066, 1403
AoxI GGCC 6 cut(s) 55, 81, 624, 739, 1053, 1163
ApaI GGGCCC 1 cut(s) 1057
ApeKI GCWGC 8 cut(s) 95, 186, 331, 398, 401, 458, 997, 1060
ApoI RAATTY 2 cut(s) 532, 884
AsiGI ACCGGT 1 cut(s) 685
Asp700I GAANNNNTTC 1 cut(s) 668
AspLEI GCGC 1 cut(s) 100
AspS9I GGNCC 4 cut(s) 624, 740, 1053, 1054
AsuC2I CCSGG 1 cut(s) 610
AsuHPI GGTGA 4 cut(s) 264, 554, 1168, 1213
BaeGI GKGCMC 1 cut(s) 1057
BalI TGGCCA 1 cut(s) 83
BanII GRGCYC 3 cut(s) 565, 681, 1057
BarI GAAGNNNNNNTAC 2 cut(s) 219, 251
BbsI GAAGAC 2 cut(s) 22, 116
Bbv12I GWGCWC 3 cut(s) 681, 813, 1240
BbvI GCAGC 8 cut(s) 107, 198, 343, 388, 410, 445, 984, 1072
BccI CCATC 4 cut(s) 218, 236, 809, 1147
BceAI ACGGC 1 cut(s) 70
BciT130I CCWGG 1 cut(s) 540
BcnI CCSGG 1 cut(s) 610
BcuI ACTAGT 1 cut(s) 440
BfaI CTAG 2 cut(s) 354, 441
BfrI CTTAAG 1 cut(s) 902
BisI GCNGC 9 cut(s) 96, 187, 332, 399, 402, 459, 998, 1061, 1140
BlsI GCNGC 9 cut(s) 97, 188, 333, 400, 403, 460, 999, 1062, 1141
Bme1390I CCNGG 2 cut(s) 540, 610
BmgBI CACGTC 3 cut(s) 28, 604, 1161
BmgT120I GGNCC 4 cut(s) 624, 740, 1053, 1054
BmiI GGNNCC 3 cut(s) 516, 1055, 1056
BmrFI CCNGG 2 cut(s) 540, 610
BmsI GCATC 3 cut(s) 385, 603, 803
BpiI GAAGAC 2 cut(s) 22, 116
BpuEI CTTGAG 1 cut(s) 347
BpuMI CCSGG 1 cut(s) 610
BsaBI GATNNNNATC 1 cut(s) 68
BsaJI CCNNGG 5 cut(s) 383, 419, 453, 627, 1438
BsaWI WCCGGW 1 cut(s) 685
Bse118I RCCGGY 3 cut(s) 230, 685, 1165
Bse3DI GCAATG 3 cut(s) 772, 921, 1134
Bse8I GATNNNNATC 1 cut(s) 68
BseBI CCWGG 1 cut(s) 540
BseDI CCNNGG 5 cut(s) 383, 419, 453, 627, 1438
BseGI GGATG 1 cut(s) 618
BseJI GATNNNNATC 1 cut(s) 68
BseMI GCAATG 3 cut(s) 772, 921, 1134
BseMII CTCAG 4 cut(s) 87, 627, 911, 1253
BseRI GAGGAG 2 cut(s) 120, 973
BseSI GKGCMC 1 cut(s) 1057
BseXI GCAGC 8 cut(s) 107, 198, 343, 388, 410, 445, 984, 1072
BseYI CCCAGC 1 cut(s) 1142
BshFI GGCC 6 cut(s) 57, 83, 626, 741, 1055, 1165
BshTI ACCGGT 1 cut(s) 685
BsiHKAI GWGCWC 3 cut(s) 681, 813, 1240
BsiSI CCGG 5 cut(s) 183, 231, 610, 686, 1166
BsmI GAATGC 1 cut(s) 1417
BsnI GGCC 6 cut(s) 57, 83, 626, 741, 1055, 1165
Bsp120I GGGCCC 1 cut(s) 1053
Bsp1286I GDGCHC 5 cut(s) 565, 681, 813, 1057, 1240
Bsp143I GATC 3 cut(s) 69, 1360, 1391
Bsp19I CCATGG 1 cut(s) 383
BspACI CCGC 5 cut(s) 323, 1058, 1092, 1139, 1175
BspANI GGCC 6 cut(s) 57, 83, 626, 741, 1055, 1165
BspCNI CTCAG 4 cut(s) 86, 628, 910, 1252
BspHI TCATGA 1 cut(s) 45
BspLI GGNNCC 3 cut(s) 516, 1055, 1056
BspPI GGATC 1 cut(s) 1399
BspTI CTTAAG 1 cut(s) 902
BsrDI GCAATG 3 cut(s) 772, 921, 1134
BsrFI RCCGGY 3 cut(s) 230, 685, 1165
BssAI RCCGGY 3 cut(s) 230, 685, 1165
BssECI CCNNGG 5 cut(s) 383, 419, 453, 627, 1438
BssMI GATC 3 cut(s) 69, 1360, 1391
BssT1I CCWWGG 3 cut(s) 383, 453, 627
Bst2UI CCWGG 1 cut(s) 540
Bst4CI ACNGT 4 cut(s) 17, 500, 668, 1109
Bst6I CTCTTC 1 cut(s) 1419
BstAFI CTTAAG 1 cut(s) 902
BstAPI GCANNNNNTGC 2 cut(s) 337, 395
BstC8I GCNNGC 2 cut(s) 311, 573
BstDEI CTNAG 4 cut(s) 73, 636, 897, 1239
BstDSI CCRYGG 2 cut(s) 383, 1438
BstEII GGTNACC 1 cut(s) 1201
BstF5I GGATG 1 cut(s) 618
BstHHI GCGC 1 cut(s) 100
BstKTI GATC 3 cut(s) 72, 1363, 1394
BstMBI GATC 3 cut(s) 69, 1360, 1391
BstMWI GCNNNNNNNGC 7 cut(s) 331, 337, 395, 458, 762, 1364, 1373
BstNI CCWGG 1 cut(s) 540
BstPI GGTNACC 1 cut(s) 1201
BstSCI CCNGG 2 cut(s) 538, 608
BstSLI GKGCMC 1 cut(s) 1057
BstV1I GCAGC 8 cut(s) 107, 198, 343, 388, 410, 445, 984, 1072
BstV2I GAAGAC 2 cut(s) 22, 116
BstXI CCANNNNNNTGG 1 cut(s) 853
BsuRI GGCC 6 cut(s) 57, 83, 626, 741, 1055, 1165
BtgI CCRYGG 2 cut(s) 383, 1438
BtrI CACGTC 3 cut(s) 28, 604, 1161
BtsCI GGATG 1 cut(s) 618
BtsIMutI CAGTG 1 cut(s) 1105
Cac8I GCNNGC 2 cut(s) 311, 573
CaiI CAGNNNCTG 3 cut(s) 337, 1066, 1403
CciI TCATGA 1 cut(s) 45
CfoI GCGC 1 cut(s) 100
Cfr10I RCCGGY 3 cut(s) 230, 685, 1165
Cfr13I GGNCC 4 cut(s) 624, 740, 1053, 1054
CseI GACGC 1 cut(s) 178
CspAI ACCGGT 1 cut(s) 685
CviAII CATG 6 cut(s) 46, 61, 384, 434, 877, 979
DdeI CTNAG 4 cut(s) 73, 636, 897, 1239
DpnI GATC 3 cut(s) 71, 1362, 1393
DpnII GATC 3 cut(s) 69, 1360, 1391
EaeI YGGCCR 3 cut(s) 55, 81, 1163
Eam1104I CTCTTC 1 cut(s) 1419
EarI CTCTTC 1 cut(s) 1419
EciI GGCGGA 1 cut(s) 1190
Ecl136II GAGCTC 1 cut(s) 679
Eco130I CCWWGG 3 cut(s) 383, 453, 627
Eco24I GRGCYC 3 cut(s) 565, 681, 1057
Eco53kI GAGCTC 1 cut(s) 679
Eco57I CTGAAG 2 cut(s) 207, 908
Eco91I GGTNACC 1 cut(s) 1201
EcoICRI GAGCTC 1 cut(s) 679
EcoO109I RGGNCCY 2 cut(s) 740, 1054
EcoO65I GGTNACC 1 cut(s) 1201
EcoRII CCWGG 1 cut(s) 538
EcoT14I CCWWGG 3 cut(s) 383, 453, 627
EcoT38I GRGCYC 3 cut(s) 565, 681, 1057
ErhI CCWWGG 3 cut(s) 383, 453, 627
FaeI CATG 6 cut(s) 49, 64, 387, 437, 880, 982
FalI AAGNNNNNCTT 4 cut(s) 309, 341, 1330, 1362
FatI CATG 6 cut(s) 45, 60, 383, 433, 876, 978
FauI CCCGC 2 cut(s) 1065, 1085
FauNDI CATATG 1 cut(s) 374
FblI GTMKAC 1 cut(s) 235
Fnu4HI GCNGC 9 cut(s) 96, 187, 332, 399, 402, 459, 998, 1061, 1140
FokI GGATG 1 cut(s) 625
FriOI GRGCYC 3 cut(s) 565, 681, 1057
Fsp4HI GCNGC 9 cut(s) 96, 187, 332, 399, 402, 459, 998, 1061, 1140
FspBI CTAG 2 cut(s) 354, 441
GlaI GCGC 1 cut(s) 99
GluI GCNGC 9 cut(s) 96, 187, 332, 399, 402, 459, 998, 1061, 1140
GsaI CCCAGC 1 cut(s) 1146
HaeIII GGCC 6 cut(s) 57, 83, 626, 741, 1055, 1165
HapII CCGG 5 cut(s) 183, 231, 610, 686, 1166
HgaI GACGC 1 cut(s) 178
HhaI GCGC 1 cut(s) 100
Hin1II CATG 6 cut(s) 49, 64, 387, 437, 880, 982
Hin6I GCGC 1 cut(s) 98
HinP1I GCGC 1 cut(s) 98
HindIII AAGCTT 1 cut(s) 307
HinfI GANTC 7 cut(s) 49, 253, 260, 526, 632, 1069, 1400
HpaII CCGG 5 cut(s) 183, 231, 610, 686, 1166
HphI GGTGA 4 cut(s) 264, 554, 1168, 1213
Hpy166II GTNNAC 2 cut(s) 236, 664
Hpy188III TCNNGA 3 cut(s) 46, 257, 493
Hpy8I GTNNAC 2 cut(s) 236, 664
Hpy99I CGWCG 2 cut(s) 605, 1126
HpyAV CCTTC 5 cut(s) 231, 718, 998, 1019, 1124
HpyCH4III ACNGT 4 cut(s) 17, 500, 668, 1109
HpyCH4IV ACGT 5 cut(s) 27, 603, 711, 1124, 1160
HpyCH4V TGCA 6 cut(s) 398, 404, 695, 756, 914, 1358
HpyF10VI GCNNNNNNNGC 7 cut(s) 331, 337, 395, 458, 762, 1364, 1373
HpyF3I CTNAG 4 cut(s) 73, 636, 897, 1239
HpySE526I ACGT 5 cut(s) 27, 603, 711, 1124, 1160
Hsp92II CATG 6 cut(s) 49, 64, 387, 437, 880, 982
HspAI GCGC 1 cut(s) 98
Kzo9I GATC 3 cut(s) 69, 1360, 1391
LmnI GCTCC 2 cut(s) 318, 1177
Lsp1109I GCAGC 8 cut(s) 107, 198, 343, 388, 410, 445, 984, 1072
LweI GCATC 3 cut(s) 385, 603, 803
MaeI CTAG 2 cut(s) 354, 441
MaeII ACGT 5 cut(s) 27, 603, 711, 1124, 1160
MaeIII GTNAC 6 cut(s) 50, 121, 604, 1099, 1156, 1201
MalI GATC 3 cut(s) 71, 1362, 1393
MboI GATC 3 cut(s) 69, 1360, 1391
MboII GAAGA 8 cut(s) 22, 121, 439, 782, 789, 919, 1288, 1436
MhlI GDGCHC 5 cut(s) 565, 681, 813, 1057, 1240
MlsI TGGCCA 1 cut(s) 83
MluCI AATT 8 cut(s) 178, 278, 289, 532, 654, 847, 884, 1419
MluNI TGGCCA 1 cut(s) 83
MlyI GAGTC 2 cut(s) 58, 254
MmeI TCCRAC 2 cut(s) 1107, 1207
Mox20I TGGCCA 1 cut(s) 83
MroXI GAANNNNTTC 1 cut(s) 668
MscI TGGCCA 1 cut(s) 83
MseI TTAA 4 cut(s) 903, 1074, 1272, 1444
Msp20I TGGCCA 1 cut(s) 83
MspA1I CMGCKG 1 cut(s) 401
MspCI CTTAAG 1 cut(s) 902
MspI CCGG 5 cut(s) 183, 231, 610, 686, 1166
MspR9I CCNGG 2 cut(s) 540, 610
Mva1269I GAATGC 1 cut(s) 1417
MvaI CCWGG 1 cut(s) 540
MwoI GCNNNNNNNGC 7 cut(s) 331, 337, 395, 458, 762, 1364, 1373
NciI CCSGG 1 cut(s) 610
NcoI CCATGG 1 cut(s) 383
NdeI CATATG 1 cut(s) 374
NdeII GATC 3 cut(s) 69, 1360, 1391
NlaIII CATG 6 cut(s) 49, 64, 387, 437, 880, 982
NlaIV GGNNCC 3 cut(s) 516, 1055, 1056
NmuCI GTSAC 5 cut(s) 50, 121, 604, 1156, 1201
PagI TCATGA 1 cut(s) 45
PctI GAATGC 1 cut(s) 1417
PdmI GAANNNNTTC 1 cut(s) 668
PfeI GAWTC 5 cut(s) 253, 526, 632, 1069, 1400
PinAI ACCGGT 1 cut(s) 685
PkrI GCNGC 9 cut(s) 97, 188, 333, 400, 403, 460, 999, 1062, 1141
PleI GAGTC 2 cut(s) 57, 254
PpsI GAGTC 2 cut(s) 57, 254
Psp124BI GAGCTC 1 cut(s) 681
Psp1406I AACGTT 1 cut(s) 711
Psp6I CCWGG 1 cut(s) 538
PspEI GGTNACC 1 cut(s) 1201
PspFI CCCAGC 1 cut(s) 1142
PspGI CCWGG 1 cut(s) 538
PspN4I GGNNCC 3 cut(s) 516, 1055, 1056
PspOMI GGGCCC 1 cut(s) 1053
PspPI GGNCC 4 cut(s) 624, 740, 1053, 1054
PstNI CAGNNNCTG 3 cut(s) 337, 1066, 1403
PvuII CAGCTG 1 cut(s) 401
SacI GAGCTC 1 cut(s) 681
SaqAI TTAA 4 cut(s) 903, 1074, 1272, 1444
SatI GCNGC 9 cut(s) 96, 187, 332, 399, 402, 459, 998, 1061, 1140
Sau3AI GATC 3 cut(s) 69, 1360, 1391
Sau96I GGNCC 4 cut(s) 624, 740, 1053, 1054
SchI GAGTC 2 cut(s) 58, 254
ScrFI CCNGG 2 cut(s) 540, 610
SduI GDGCHC 5 cut(s) 565, 681, 813, 1057, 1240
SfaNI GCATC 3 cut(s) 385, 603, 803
SmlI CTYRAG 2 cut(s) 326, 902
SmoI CTYRAG 2 cut(s) 326, 902
SpeI ACTAGT 1 cut(s) 440
Sse9I AATT 8 cut(s) 178, 278, 289, 532, 654, 847, 884, 1419
SsiI CCGC 5 cut(s) 323, 1058, 1092, 1139, 1175
SspI AATATT 1 cut(s) 592
SspMI CTAG 2 cut(s) 354, 441
SstI GAGCTC 1 cut(s) 681
StyD4I CCNGG 2 cut(s) 538, 608
StyI CCWWGG 3 cut(s) 383, 453, 627
TaaI ACNGT 4 cut(s) 17, 500, 668, 1109
TaiI ACGT 5 cut(s) 30, 606, 714, 1127, 1163
TaqI TCGA 5 cut(s) 198, 258, 342, 681, 1121
TasI AATT 8 cut(s) 178, 278, 289, 532, 654, 847, 884, 1419
TauI GCSGC 1 cut(s) 1142
TfiI GAWTC 5 cut(s) 253, 526, 632, 1069, 1400
Tru1I TTAA 4 cut(s) 903, 1074, 1272, 1444
Tru9I TTAA 4 cut(s) 903, 1074, 1272, 1444
TscAI CASTG 1 cut(s) 1112
TseFI GTSAC 5 cut(s) 50, 121, 604, 1156, 1201
TseI GCWGC 8 cut(s) 95, 186, 331, 398, 401, 458, 997, 1060
Tsp45I GTSAC 5 cut(s) 50, 121, 604, 1156, 1201
TspDTI ATGAA 4 cut(s) 34, 422, 783, 934
TspRI CASTG 1 cut(s) 1112
Vha464I CTTAAG 1 cut(s) 902
XapI RAATTY 2 cut(s) 532, 884
XmiI GTMKAC 1 cut(s) 235
XmnI GAANNNNTTC 1 cut(s) 668
XspI CTAG 2 cut(s) 354, 441
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.