Rroxscaffold_7G00209430

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000135
Physical Location & Seq
Forward (+)
59664528 .. 59665928
1401 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00209430.1

Sequence Viewer

Length: 1401 bp
ATGGCTCAAGGCCACACTTTACCCATGATAGACATAGCCAAACTATTTGCTTCACGTGGTGTAAAATCCACCTTAATAACCACCCCTGTCAATGCACCACTTTTCTCCAAAGCAATCGAAACTAGCAAAAGTTTGGGTTTCGAAATTGAACTTCTTGTCATCAAATTCCCATCTACTGAAGTCGGGTTGCCTGAAGGAATTGAAAGAACTAACTGTCGTAAAAACCAAGAGCAGGTGGAAAAGTACTTCAAAGCCATTACTCTGCTTGAGCAACAGGTTGAGCCGATTTTAGACCAACATCGTCCTCACTGTCTTGTTGCGGACTCTATGTTTCCTTGGGCTACAGATGTTGCCGCCAAATTTGGGATTCCAAGGATCATCTTTCATGGACCCGGGTTTTTTTTCTTGTGTGCTTCAACTACTGTGATGCGGTACCAACCTCAGAGGGAGGTTTTATCTGATTCAGAATCTTTTGTTATTCCTGGTCTCCCAGATGAGATCAAGATGACAAAAAGCAAATTAGCTCCTTTTCTTACTCTAGATGGTGAGTCAGAACTCATCAAGTTGGTCAAAGCATCCATAGAGGCCGAGGAAAGGAGCTACGGGATTATTGTAAACAGCTTCTATGAACTTGAACCTGATTATGCAGATCACTATAGGAAGGTATTGGGGAAGAAGTCATGGCATATCGGCCCGGTTTCTTTATGCGAAACAGAAAAAGATAAAGCAGAGAGGGGAAGGGAAGGCTCAGTTGACGAAGTACATGAGTGCTTGAACTGGCTTAATTCTAAGAAACCCAATTCTGTTGTTTATATATGTTTTGGAAGCCTGACCAATTTTGGTGATTGTCAGCTCTTGGAAATTGCCTTGGCTCTTCAAGCTTCTCGACAGCAATTCATTTGGGTTGTGAAGACAGAAAAGAATGATAAAGAAGAGTGGCTGCCTGAAGGATTTGAGCAGAGAGTGGAAGGAAAGGGATTGATTATAAGAGGTTGGGCTCCCCAACTACTGATTCTACAACATGATGCAGTTGGGGCCTTTCTCACTCATTGTGGGTGGAACTCAACCCTTGAAGGAGTGTGTGCTGGGGTGCCAATGATCACGTGGCCAGTAAACGCAGATCAGTTTTACAATGAGAAGTTGGTGACTGAGATACTTGGGATTGGAGTTGCTATTGGTGTTCAAAAGTGGGAGCATGTTAGTATGAAAAGCAAAGCCAGTGTGAAGAAGGAGACCATAGAGAAGGCTTTGACTAGATTCATGGTTGGTGATGAAAAAGAGGAAATTAGAAGTAAAGTTCTTGTGCTCAGAGAGCTCGCAAGGAGGGCAGTTGAAGATGGTGGTTCATCGTTCTCGGATTTAACTGCTTTAATTGAAGAGTTGAAGTCTCTCGGGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

466

Amino Acids

52.2

Weight (kDa)

5.65

Isoelectric Point (pI)

40.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 257 - 385 6.6e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 986
AarI CACCTGC 1 cut(s) 223
Acc36I ACCTGC 1 cut(s) 223
Acc65I GGTACC 1 cut(s) 432
AccB1I GGYRCC 2 cut(s) 432, 1090
AciI CCGC 3 cut(s) 320, 354, 430
AclWI GGATC 1 cut(s) 383
AcoI YGGCCR 1 cut(s) 1106
AcsI RAATTY 2 cut(s) 164, 359
AcuI CTGAAG 3 cut(s) 198, 213, 966
AcvI CACGTG 2 cut(s) 56, 1104
AdeI CACNNNGTG 1 cut(s) 59
AfaI GTAC 3 cut(s) 245, 434, 762
AfiI CCNNNNNNNGG 3 cut(s) 232, 363, 594
AjnI CCWGG 1 cut(s) 481
AjuI GAANNNNNNNTTGG 2 cut(s) 996, 1028
AluBI AGCT 6 cut(s) 524, 600, 621, 853, 881, 1315
AluI AGCT 6 cut(s) 524, 600, 621, 853, 881, 1315
Alw21I GWGCWC 2 cut(s) 1308, 1317
Alw26I GTCTC 3 cut(s) 491, 1226, 1392
AlwI GGATC 1 cut(s) 383
Ama87I CYCGRG 2 cut(s) 392, 1391
AoxI GGCC 5 cut(s) 10, 585, 691, 1035, 1106
ApeKI GCWGC 1 cut(s) 940
ApoI RAATTY 2 cut(s) 164, 359
Asp718I GGTACC 1 cut(s) 432
AspS9I GGNCC 3 cut(s) 389, 692, 1035
AsuC2I CCSGG 3 cut(s) 393, 394, 695
AsuHPI GGTGA 4 cut(s) 557, 854, 1156, 1280
AsuII TTCGAA 1 cut(s) 141
AvaI CYCGRG 2 cut(s) 392, 1391
AvaII GGWCC 1 cut(s) 389
BalI TGGCCA 1 cut(s) 1108
BanI GGYRCC 2 cut(s) 432, 1090
BanII GRGCYC 2 cut(s) 1000, 1317
BbrPI CACGTG 2 cut(s) 56, 1104
BbsI GAAGAC 1 cut(s) 917
Bbv12I GWGCWC 2 cut(s) 1308, 1317
BbvI GCAGC 1 cut(s) 927
BccI CCATC 3 cut(s) 178, 536, 1331
BciT130I CCWGG 1 cut(s) 483
BclI TGATCA 1 cut(s) 1098
BcnI CCSGG 3 cut(s) 393, 394, 695
BcoDI GTCTC 3 cut(s) 491, 1226, 1392
BfaI CTAG 3 cut(s) 123, 539, 1254
BfmI CTRYAG 2 cut(s) 342, 655
BfuAI ACCTGC 1 cut(s) 223
BisI GCNGC 2 cut(s) 354, 941
BlsI GCNGC 2 cut(s) 355, 942
BmcAI AGTACT 1 cut(s) 245
Bme1390I CCNGG 4 cut(s) 393, 394, 483, 695
Bme18I GGWCC 1 cut(s) 389
BmeT110I CYCGRG 2 cut(s) 392, 1391
BmgT120I GGNCC 3 cut(s) 389, 692, 1035
BmiI GGNNCC 5 cut(s) 391, 434, 999, 1036, 1092
BmrFI CCNGG 4 cut(s) 393, 394, 483, 695
BmsI GCATC 3 cut(s) 417, 584, 1015
BpiI GAAGAC 1 cut(s) 917
Bpu14I TTCGAA 1 cut(s) 141
BpuEI CTTGAG 1 cut(s) 287
BpuMI CCSGG 3 cut(s) 393, 394, 695
BsaAI YACGTR 2 cut(s) 56, 1104
BsaI GGTCTC 2 cut(s) 491, 1226
BsaJI CCNNGG 5 cut(s) 335, 371, 392, 588, 867
Bsc4I CCNNNNNNNGG 3 cut(s) 232, 363, 594
Bse1I ACTGG 3 cut(s) 782, 1109, 1218
BseBI CCWGG 1 cut(s) 483
BseDI CCNNGG 5 cut(s) 335, 371, 392, 588, 867
BseGI GGATG 1 cut(s) 575
BseLI CCNNNNNNNGG 3 cut(s) 232, 363, 594
BseMII CTCAG 4 cut(s) 455, 762, 1140, 1321
BseNI ACTGG 3 cut(s) 782, 1109, 1218
BseXI GCAGC 1 cut(s) 927
BseYI CCCAGC 1 cut(s) 1085
BshFI GGCC 5 cut(s) 12, 587, 693, 1037, 1108
BshNI GGYRCC 2 cut(s) 432, 1090
BsiHKAI GWGCWC 2 cut(s) 1308, 1317
BsiHKCI CYCGRG 2 cut(s) 392, 1391
BsiSI CCGG 2 cut(s) 393, 695
BslI CCNNNNNNNGG 3 cut(s) 232, 363, 594
BsmAI GTCTC 3 cut(s) 491, 1226, 1392
BsnI GGCC 5 cut(s) 12, 587, 693, 1037, 1108
Bso31I GGTCTC 2 cut(s) 491, 1226
BsoBI CYCGRG 2 cut(s) 392, 1391
Bsp119I TTCGAA 1 cut(s) 141
Bsp1286I GDGCHC 3 cut(s) 1000, 1308, 1317
Bsp143I GATC 5 cut(s) 375, 498, 649, 1098, 1120
BspACI CCGC 3 cut(s) 320, 354, 430
BspANI GGCC 5 cut(s) 12, 587, 693, 1037, 1108
BspCNI CTCAG 4 cut(s) 454, 761, 1141, 1320
BspLI GGNNCC 5 cut(s) 391, 434, 999, 1036, 1092
BspMI ACCTGC 1 cut(s) 223
BspPI GGATC 1 cut(s) 383
BspQI GCTCTTC 1 cut(s) 879
BspT104I TTCGAA 1 cut(s) 141
BspT107I GGYRCC 2 cut(s) 432, 1090
BspTNI GGTCTC 2 cut(s) 491, 1226
BsrI ACTGG 3 cut(s) 782, 1109, 1218
BssECI CCNNGG 5 cut(s) 335, 371, 392, 588, 867
BssMI GATC 5 cut(s) 375, 498, 649, 1098, 1120
BssT1I CCWWGG 3 cut(s) 335, 371, 867
Bst2UI CCWGG 1 cut(s) 483
Bst4CI ACNGT 3 cut(s) 215, 311, 424
Bst6I CTCTTC 3 cut(s) 879, 927, 1371
BstBAI YACGTR 2 cut(s) 56, 1104
BstBI TTCGAA 1 cut(s) 141
BstC8I GCNNGC 1 cut(s) 1317
BstDEI CTNAG 5 cut(s) 441, 748, 789, 1149, 1307
BstF5I GGATG 1 cut(s) 575
BstKTI GATC 5 cut(s) 378, 501, 652, 1101, 1123
BstMAI GTCTC 3 cut(s) 491, 1226, 1392
BstMBI GATC 5 cut(s) 375, 498, 649, 1098, 1120
BstMWI GCNNNNNNNGC 4 cut(s) 878, 1034, 1312, 1325
BstNI CCWGG 1 cut(s) 483
BstNSI RCATGY 1 cut(s) 1199
BstSCI CCNGG 4 cut(s) 391, 392, 481, 693
BstSFI CTRYAG 2 cut(s) 342, 655
BstV1I GCAGC 1 cut(s) 927
BstV2I GAAGAC 1 cut(s) 917
BsuRI GGCC 5 cut(s) 12, 587, 693, 1037, 1108
BtsCI GGATG 1 cut(s) 575
BtsIMutI CAGTG 2 cut(s) 307, 1225
BveI ACCTGC 1 cut(s) 223
Cac8I GCNNGC 1 cut(s) 1317
Cfr13I GGNCC 3 cut(s) 389, 692, 1035
Cfr9I CCCGGG 1 cut(s) 392
Csp6I GTAC 3 cut(s) 244, 433, 761
CviAII CATG 7 cut(s) 25, 386, 681, 764, 1022, 1196, 1261
CviQI GTAC 3 cut(s) 244, 433, 761
DdeI CTNAG 5 cut(s) 441, 748, 789, 1149, 1307
DpnI GATC 5 cut(s) 377, 500, 651, 1100, 1122
DpnII GATC 5 cut(s) 375, 498, 649, 1098, 1120
DraIII CACNNNGTG 1 cut(s) 59
EaeI YGGCCR 1 cut(s) 1106
Eam1104I CTCTTC 3 cut(s) 879, 927, 1371
EarI CTCTTC 3 cut(s) 879, 927, 1371
Ecl136II GAGCTC 1 cut(s) 1315
Eco130I CCWWGG 3 cut(s) 335, 371, 867
Eco24I GRGCYC 2 cut(s) 1000, 1317
Eco31I GGTCTC 2 cut(s) 491, 1226
Eco47I GGWCC 1 cut(s) 389
Eco53kI GAGCTC 1 cut(s) 1315
Eco57I CTGAAG 3 cut(s) 198, 213, 966
Eco72I CACGTG 2 cut(s) 56, 1104
Eco88I CYCGRG 2 cut(s) 392, 1391
EcoICRI GAGCTC 1 cut(s) 1315
EcoO109I RGGNCCY 1 cut(s) 1035
EcoRII CCWGG 1 cut(s) 481
EcoT14I CCWWGG 3 cut(s) 335, 371, 867
EcoT38I GRGCYC 2 cut(s) 1000, 1317
ErhI CCWWGG 3 cut(s) 335, 371, 867
FaeI CATG 7 cut(s) 28, 389, 684, 767, 1025, 1199, 1264
FatI CATG 7 cut(s) 24, 385, 680, 763, 1021, 1195, 1260
FbaI TGATCA 1 cut(s) 1098
Fnu4HI GCNGC 2 cut(s) 354, 941
FokI GGATG 1 cut(s) 562
FriOI GRGCYC 2 cut(s) 1000, 1317
Fsp4HI GCNGC 2 cut(s) 354, 941
FspBI CTAG 3 cut(s) 123, 539, 1254
GluI GCNGC 2 cut(s) 354, 941
GsaI CCCAGC 1 cut(s) 1089
HaeIII GGCC 5 cut(s) 12, 587, 693, 1037, 1108
HapII CCGG 2 cut(s) 393, 695
Hin1II CATG 7 cut(s) 28, 389, 684, 767, 1025, 1199, 1264
HincII GTYRAC 1 cut(s) 754
HindII GTYRAC 1 cut(s) 754
HindIII AAGCTT 1 cut(s) 879
HinfI GANTC 7 cut(s) 323, 367, 461, 467, 548, 1012, 1257
HpaII CCGG 2 cut(s) 393, 695
HphI GGTGA 4 cut(s) 557, 854, 1156, 1280
Hpy166II GTNNAC 3 cut(s) 616, 754, 1114
Hpy188I TCNGA 6 cut(s) 444, 460, 466, 553, 1310, 1357
Hpy188III TCNNGA 4 cut(s) 502, 539, 885, 1398
Hpy8I GTNNAC 3 cut(s) 616, 754, 1114
HpyAV CCTTC 9 cut(s) 188, 655, 732, 737, 941, 962, 1067, 1222, 1237
HpyCH4III ACNGT 3 cut(s) 215, 311, 424
HpyCH4IV ACGT 2 cut(s) 55, 1103
HpyCH4V TGCA 3 cut(s) 95, 647, 1028
HpyF10VI GCNNNNNNNGC 4 cut(s) 878, 1034, 1312, 1325
HpyF3I CTNAG 5 cut(s) 441, 748, 789, 1149, 1307
HpySE526I ACGT 2 cut(s) 55, 1103
Hsp92II CATG 7 cut(s) 28, 389, 684, 767, 1025, 1199, 1264
KpnI GGTACC 1 cut(s) 436
Ksp22I TGATCA 1 cut(s) 1098
Kzo9I GATC 5 cut(s) 375, 498, 649, 1098, 1120
LguI GCTCTTC 1 cut(s) 879
LmnI GCTCC 4 cut(s) 529, 597, 1003, 1192
Lsp1109I GCAGC 1 cut(s) 927
LweI GCATC 3 cut(s) 417, 584, 1015
MaeI CTAG 3 cut(s) 123, 539, 1254
MaeII ACGT 2 cut(s) 55, 1103
MaeIII GTNAC 1 cut(s) 1144
MalI GATC 5 cut(s) 377, 500, 651, 1100, 1122
MboI GATC 5 cut(s) 375, 498, 649, 1098, 1120
MboII GAAGA 7 cut(s) 685, 866, 922, 944, 1237, 1346, 1388
MhlI GDGCHC 3 cut(s) 1000, 1308, 1317
MlsI TGGCCA 1 cut(s) 1108
MluNI TGGCCA 1 cut(s) 1108
MlyI GAGTC 2 cut(s) 317, 557
Mox20I TGGCCA 1 cut(s) 1108
MscI TGGCCA 1 cut(s) 1108
MseI TTAA 4 cut(s) 74, 783, 1361, 1370
Msp20I TGGCCA 1 cut(s) 1108
MspI CCGG 2 cut(s) 393, 695
MspR9I CCNGG 4 cut(s) 393, 394, 483, 695
MvaI CCWGG 1 cut(s) 483
MwoI GCNNNNNNNGC 4 cut(s) 878, 1034, 1312, 1325
NciI CCSGG 3 cut(s) 393, 394, 695
NdeII GATC 5 cut(s) 375, 498, 649, 1098, 1120
NlaIII CATG 7 cut(s) 28, 389, 684, 767, 1025, 1199, 1264
NlaIV GGNNCC 5 cut(s) 391, 434, 999, 1036, 1092
NmeAIII GCCGAG 1 cut(s) 613
NmuCI GTSAC 1 cut(s) 1144
NspI RCATGY 1 cut(s) 1199
NspV TTCGAA 1 cut(s) 141
PaqCI CACCTGC 1 cut(s) 223
PciSI GCTCTTC 1 cut(s) 879
PfeI GAWTC 5 cut(s) 367, 461, 467, 1012, 1257
PkrI GCNGC 2 cut(s) 355, 942
PleI GAGTC 2 cut(s) 317, 556
PmaCI CACGTG 2 cut(s) 56, 1104
PmlI CACGTG 2 cut(s) 56, 1104
PpsI GAGTC 2 cut(s) 317, 556
Ppu21I YACGTR 2 cut(s) 56, 1104
PsiI TTATAA 1 cut(s) 986
Psp124BI GAGCTC 1 cut(s) 1317
Psp6I CCWGG 1 cut(s) 481
PspCI CACGTG 2 cut(s) 56, 1104
PspFI CCCAGC 1 cut(s) 1085
PspGI CCWGG 1 cut(s) 481
PspN4I GGNNCC 5 cut(s) 391, 434, 999, 1036, 1092
PspPI GGNCC 3 cut(s) 389, 692, 1035
RsaI GTAC 3 cut(s) 245, 434, 762
RsaNI GTAC 3 cut(s) 244, 433, 761
SacI GAGCTC 1 cut(s) 1317
SapI GCTCTTC 1 cut(s) 879
SaqAI TTAA 4 cut(s) 74, 783, 1361, 1370
SatI GCNGC 2 cut(s) 354, 941
Sau3AI GATC 5 cut(s) 375, 498, 649, 1098, 1120
Sau96I GGNCC 3 cut(s) 389, 692, 1035
ScaI AGTACT 1 cut(s) 245
SchI GAGTC 2 cut(s) 317, 557
ScrFI CCNGG 4 cut(s) 393, 394, 483, 695
SduI GDGCHC 3 cut(s) 1000, 1308, 1317
SfaNI GCATC 3 cut(s) 417, 584, 1015
SfcI CTRYAG 2 cut(s) 342, 655
SfuI TTCGAA 1 cut(s) 141
SinI GGWCC 1 cut(s) 389
SmaI CCCGGG 1 cut(s) 394
SmlI CTYRAG 2 cut(s) 6, 266
SmoI CTYRAG 2 cut(s) 6, 266
SsiI CCGC 3 cut(s) 320, 354, 430
SspMI CTAG 3 cut(s) 123, 539, 1254
SstI GAGCTC 1 cut(s) 1317
StyD4I CCNGG 4 cut(s) 391, 392, 481, 693
StyI CCWWGG 3 cut(s) 335, 371, 867
TaaI ACNGT 3 cut(s) 215, 311, 424
TaiI ACGT 2 cut(s) 58, 1106
TaqI TCGA 3 cut(s) 117, 141, 886
TatI WGTACW 2 cut(s) 243, 760
TauI GCSGC 1 cut(s) 356
TfiI GAWTC 5 cut(s) 367, 461, 467, 1012, 1257
Tru1I TTAA 4 cut(s) 74, 783, 1361, 1370
Tru9I TTAA 4 cut(s) 74, 783, 1361, 1370
TscAI CASTG 2 cut(s) 314, 1225
TseFI GTSAC 1 cut(s) 1144
TseI GCWGC 1 cut(s) 940
Tsp45I GTSAC 1 cut(s) 1144
TspDTI ATGAA 7 cut(s) 374, 642, 886, 1220, 1249, 1287, 1335
TspMI CCCGGG 1 cut(s) 392
TspRI CASTG 2 cut(s) 314, 1225
VpaK11BI GGWCC 1 cut(s) 389
XapI RAATTY 2 cut(s) 164, 359
XbaI TCTAGA 1 cut(s) 538
XceI RCATGY 1 cut(s) 1199
XcmI CCANNNNNNNNNTGG 1 cut(s) 1101
XmaI CCCGGG 1 cut(s) 392
XspI CTAG 3 cut(s) 123, 539, 1254
ZrmI AGTACT 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.