RchiOBHm_Chr6g0256421

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000135
Physical Location & Seq
Reverse (-)
11587624 .. 11589071
1448 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ23002

Sequence Viewer

Length: 1365 bp
ATGGAAACCAAAACTGAGCAGCAGCTTCACATTTTCTTCCTTCCCTTTATGGCTCAAGGCCACACTTTACCCCTTATAGATATAGCCAAACTATTTGCTTCACGTGGTGTAAAATCCACCTTAATAACCACCCTCGTCAATGCACCACTTTTCTCCAAAGCAATCCAAACTAGCAAAAGTTTGGGTTTCGAAATCGAACTTCTTGTCATCAAATTCCCATCTACTGAAGTCGGGTTGCCTGAAGGAATTGAAAGAACTAACTTGCGTAAAAAGCAAGAGCAGGCGGATAAGTACTTCAGAGCCACCAATCTGCTTGAGCAACAGGTTGAGCCAATTTTAGACCAACATCGTCCTCACTGTCTTGTTGCAGACTCTCTGTTTCCTTGGGCTACAGATGTTGCTGCCAAGTTTGGGATTCCAAGGATCATCTTTCATGGACCCGGTTTTTTCCCCTTGTGCGCTTCAACTAGTGTGATGCGGTACCAACCTCAGAGGGAGGTTTCATCTGATTCAGAATCTTTTGTCGTTCCTGGTCTCCCAGATGAGATCAAGATGACAAAAAACAAACTAGCTCCTTTTCTTACTTTAGATGGTGAGTCAGAACTCATCAAAGTGGTCACAGCATCTCAATTGGCCAATGAAACAAGCTATGGGATTATAGTTAACAGCTTCTATGAACTTGAACCAGCCTATGCAGATCATTATAGGAAGGTGTTTGGCAGGAAAGCATGGCATATAGGACCAGCTTCTTTATGCGAGACAGAAAAAGATAAATTACAGAGGGGAAGGAAGGCTCGGTTGATGAAATACATGAGTCTCTTAGAAATCGCCTTGGCTCTTGAAGCGTCTCGACAGCAATTCATTTGGGTTGTGAAGAAAGAAAATAATGATAAAGAAGAGTGGCTGCCTGAAGGATTTGAGCAGAGAGTGGAGGGAAAGGGATTGATTATAAGAGGTTGGGCACCCCAACTACTGATTCTTCAACATGAAGCAGTTGGGGCCTTTCTCACTTATTGTGGGTGGAACTCAACCCTTGAAGCAGTGTGTGCTGGGATCCCAATGATCACATGGCCAGTGTCCGCAGATCAGTTTTACAATGAGAAATTGGTGACTCAGATATTAGGGATTGGGGTTGCTGTTGGTGTTGAAAAATGGGAGGATGATAGTGTGAAGAGTGAAGCCAGTATGAAGAAGGAGACCATAGAGAAGGCCGTGACTGAATTCATGGTCAGTCATGAAAAAGAGGAAATGAGAAGCAAAATTCTTGAACTCAGAGACCTCGCAAGGAGGGCAGTTGAAGAAGGTGGTTCATCATTCTTGGATTTAACTGCTCTAATTGAAGAGTTGAAGTCTCTCAGGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

454

Amino Acids

51.3

Weight (kDa)

5.86

Isoelectric Point (pI)

45.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 273 - 381 1.4e-15 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 950
Acc65I GGTACC 1 cut(s) 480
AccB1I GGYRCC 2 cut(s) 480, 961
AciI CCGC 3 cut(s) 284, 478, 1080
AclWI GGATC 3 cut(s) 431, 1048, 1061
AcoI YGGCCR 2 cut(s) 633, 1070
AcsI RAATTY 3 cut(s) 212, 1220, 1260
AcuI CTGAAG 4 cut(s) 246, 261, 280, 930
AcvI CACGTG 1 cut(s) 104
AdeI CACNNNGTG 1 cut(s) 107
AfaI GTAC 2 cut(s) 293, 482
AfiI CCNNNNNNNGG 1 cut(s) 411
AhlI ACTAGT 1 cut(s) 467
AjnI CCWGG 1 cut(s) 529
AjuI GAANNNNNNNTTGG 2 cut(s) 960, 992
AluBI AGCT 5 cut(s) 25, 572, 648, 669, 746
AluI AGCT 5 cut(s) 25, 572, 648, 669, 746
Alw26I GTCTC 7 cut(s) 539, 752, 821, 852, 1190, 1269, 1356
AlwI GGATC 3 cut(s) 431, 1048, 1061
AoxI GGCC 5 cut(s) 58, 633, 999, 1070, 1209
ApeKI GCWGC 4 cut(s) 19, 22, 401, 904
ApoI RAATTY 3 cut(s) 212, 1220, 1260
ArsI GACNNNNNNTTYG 2 cut(s) 189, 221
Asp718I GGTACC 1 cut(s) 480
AspLEI GCGC 1 cut(s) 461
AspS9I GGNCC 3 cut(s) 437, 740, 999
AsuC2I CCSGG 1 cut(s) 441
AsuHPI GGTGA 2 cut(s) 605, 1120
AsuII TTCGAA 1 cut(s) 189
AvaII GGWCC 2 cut(s) 437, 740
BaeGI GKGCMC 1 cut(s) 964
BalI TGGCCA 2 cut(s) 635, 1072
BamHI GGATCC 1 cut(s) 1053
BanI GGYRCC 2 cut(s) 480, 961
BbrPI CACGTG 1 cut(s) 104
BbvI GCAGC 4 cut(s) 31, 34, 388, 891
BccI CCATC 2 cut(s) 226, 584
BceAI ACGGC 1 cut(s) 1196
BciT130I CCWGG 1 cut(s) 531
BclI TGATCA 1 cut(s) 1062
BcnI CCSGG 1 cut(s) 441
BcoDI GTCTC 7 cut(s) 539, 752, 821, 852, 1190, 1269, 1356
BcuI ACTAGT 1 cut(s) 467
BfaI CTAG 3 cut(s) 171, 468, 569
BfmI CTRYAG 1 cut(s) 390
BisI GCNGC 4 cut(s) 20, 23, 402, 905
BlsI GCNGC 4 cut(s) 21, 24, 403, 906
BmcAI AGTACT 1 cut(s) 293
Bme1390I CCNGG 2 cut(s) 441, 531
Bme18I GGWCC 2 cut(s) 437, 740
BmgT120I GGNCC 3 cut(s) 437, 740, 999
BmiI GGNNCC 5 cut(s) 439, 482, 963, 1000, 1055
BmrFI CCNGG 2 cut(s) 441, 531
BmsI GCATC 2 cut(s) 465, 632
Bpu14I TTCGAA 1 cut(s) 189
BpuEI CTTGAG 2 cut(s) 39, 335
BpuMI CCSGG 1 cut(s) 441
BsaAI YACGTR 1 cut(s) 104
BsaI GGTCTC 3 cut(s) 539, 1190, 1269
BsaJI CCNNGG 3 cut(s) 383, 419, 831
Bsc4I CCNNNNNNNGG 1 cut(s) 411
Bse1I ACTGG 2 cut(s) 1073, 1182
BseBI CCWGG 1 cut(s) 531
BseDI CCNNGG 3 cut(s) 383, 419, 831
BseGI GGATG 1 cut(s) 1165
BseLI CCNNNNNNNGG 1 cut(s) 411
BseMII CTCAG 4 cut(s) 6, 503, 1127, 1285
BseNI ACTGG 2 cut(s) 1073, 1182
BseSI GKGCMC 1 cut(s) 964
BseXI GCAGC 4 cut(s) 31, 34, 388, 891
BseYI CCCAGC 1 cut(s) 1049
BshFI GGCC 5 cut(s) 60, 635, 1001, 1072, 1211
BshNI GGYRCC 2 cut(s) 480, 961
BsiSI CCGG 1 cut(s) 441
BslI CCNNNNNNNGG 1 cut(s) 411
BsmAI GTCTC 7 cut(s) 539, 752, 821, 852, 1190, 1269, 1356
BsmBI CGTCTC 1 cut(s) 852
BsnI GGCC 5 cut(s) 60, 635, 1001, 1072, 1211
Bso31I GGTCTC 3 cut(s) 539, 1190, 1269
Bsp119I TTCGAA 1 cut(s) 189
Bsp1286I GDGCHC 1 cut(s) 964
Bsp143I GATC 6 cut(s) 423, 546, 697, 1053, 1062, 1084
BspACI CCGC 3 cut(s) 284, 478, 1080
BspANI GGCC 5 cut(s) 60, 635, 1001, 1072, 1211
BspCNI CTCAG 4 cut(s) 7, 502, 1126, 1284
BspHI TCATGA 1 cut(s) 1234
BspLI GGNNCC 5 cut(s) 439, 482, 963, 1000, 1055
BspPI GGATC 3 cut(s) 431, 1048, 1061
BspT104I TTCGAA 1 cut(s) 189
BspT107I GGYRCC 2 cut(s) 480, 961
BspTNI GGTCTC 3 cut(s) 539, 1190, 1269
BsrI ACTGG 2 cut(s) 1073, 1182
BssECI CCNNGG 3 cut(s) 383, 419, 831
BssMI GATC 6 cut(s) 423, 546, 697, 1053, 1062, 1084
BssT1I CCWWGG 3 cut(s) 383, 419, 831
Bst2UI CCWGG 1 cut(s) 531
Bst4CI ACNGT 1 cut(s) 359
Bst6I CTCTTC 3 cut(s) 891, 1166, 1335
BstAPI GCANNNNNTGC 1 cut(s) 1046
BstBAI YACGTR 1 cut(s) 104
BstBI TTCGAA 1 cut(s) 189
BstC8I GCNNGC 1 cut(s) 282
BstDEI CTNAG 6 cut(s) 15, 489, 820, 1113, 1271, 1355
BstF5I GGATG 1 cut(s) 1165
BstHHI GCGC 1 cut(s) 461
BstKTI GATC 6 cut(s) 426, 549, 700, 1056, 1065, 1087
BstMAI GTCTC 7 cut(s) 539, 752, 821, 852, 1190, 1269, 1356
BstMBI GATC 6 cut(s) 423, 546, 697, 1053, 1062, 1084
BstMWI GCNNNNNNNGC 5 cut(s) 271, 842, 998, 1046, 1289
BstNI CCWGG 1 cut(s) 531
BstSCI CCNGG 2 cut(s) 439, 529
BstSFI CTRYAG 1 cut(s) 390
BstSLI GKGCMC 1 cut(s) 964
BstV1I GCAGC 4 cut(s) 31, 34, 388, 891
BstX2I RGATCY 1 cut(s) 1053
BstYI RGATCY 1 cut(s) 1053
BsuRI GGCC 5 cut(s) 60, 635, 1001, 1072, 1211
BtsCI GGATG 1 cut(s) 1165
BtsI GCAGTG 1 cut(s) 1047
BtsIMutI CAGTG 3 cut(s) 355, 1047, 1080
Cac8I GCNNGC 1 cut(s) 282
CciI TCATGA 1 cut(s) 1234
CfoI GCGC 1 cut(s) 461
Cfr13I GGNCC 3 cut(s) 437, 740, 999
CseI GACGC 1 cut(s) 834
Csp6I GTAC 2 cut(s) 292, 481
CviAII CATG 7 cut(s) 434, 729, 811, 986, 1068, 1225, 1235
CviQI GTAC 2 cut(s) 292, 481
DdeI CTNAG 6 cut(s) 15, 489, 820, 1113, 1271, 1355
DpnI GATC 6 cut(s) 425, 548, 699, 1055, 1064, 1086
DpnII GATC 6 cut(s) 423, 546, 697, 1053, 1062, 1084
DraIII CACNNNGTG 1 cut(s) 107
EaeI YGGCCR 2 cut(s) 633, 1070
Eam1104I CTCTTC 3 cut(s) 891, 1166, 1335
EarI CTCTTC 3 cut(s) 891, 1166, 1335
EciI GGCGGA 1 cut(s) 299
Eco130I CCWWGG 3 cut(s) 383, 419, 831
Eco31I GGTCTC 3 cut(s) 539, 1190, 1269
Eco47I GGWCC 2 cut(s) 437, 740
Eco57I CTGAAG 4 cut(s) 246, 261, 280, 930
Eco72I CACGTG 1 cut(s) 104
EcoO109I RGGNCCY 1 cut(s) 999
EcoRI GAATTC 1 cut(s) 1220
EcoRII CCWGG 1 cut(s) 529
EcoT14I CCWWGG 3 cut(s) 383, 419, 831
ErhI CCWWGG 3 cut(s) 383, 419, 831
Esp3I CGTCTC 1 cut(s) 852
FaeI CATG 7 cut(s) 437, 732, 814, 989, 1071, 1228, 1238
FatI CATG 7 cut(s) 433, 728, 810, 985, 1067, 1224, 1234
FbaI TGATCA 1 cut(s) 1062
Fnu4HI GCNGC 4 cut(s) 20, 23, 402, 905
FokI GGATG 1 cut(s) 1172
Fsp4HI GCNGC 4 cut(s) 20, 23, 402, 905
FspBI CTAG 3 cut(s) 171, 468, 569
GlaI GCGC 1 cut(s) 460
GluI GCNGC 4 cut(s) 20, 23, 402, 905
GsaI CCCAGC 1 cut(s) 1053
HaeIII GGCC 5 cut(s) 60, 635, 1001, 1072, 1211
HapII CCGG 1 cut(s) 441
HgaI GACGC 1 cut(s) 834
HhaI GCGC 1 cut(s) 461
Hin1II CATG 7 cut(s) 437, 732, 814, 989, 1071, 1228, 1238
Hin6I GCGC 1 cut(s) 459
HinP1I GCGC 1 cut(s) 459
HincII GTYRAC 1 cut(s) 664
HindII GTYRAC 1 cut(s) 664
HinfI GANTC 8 cut(s) 371, 415, 509, 515, 596, 814, 976, 1111
HpaI GTTAAC 1 cut(s) 664
HpaII CCGG 1 cut(s) 441
HphI GGTGA 2 cut(s) 605, 1120
Hpy166II GTNNAC 1 cut(s) 664
Hpy188I TCNGA 7 cut(s) 299, 492, 508, 514, 601, 1116, 1274
Hpy188III TCNNGA 5 cut(s) 550, 839, 849, 1235, 1265
Hpy8I GTNNAC 1 cut(s) 664
HpyAV CCTTC 9 cut(s) 50, 236, 703, 780, 784, 905, 1186, 1201, 1295
HpyCH4III ACNGT 1 cut(s) 359
HpyCH4IV ACGT 1 cut(s) 103
HpyCH4V TGCA 3 cut(s) 143, 368, 695
HpyF10VI GCNNNNNNNGC 5 cut(s) 271, 842, 998, 1046, 1289
HpyF3I CTNAG 6 cut(s) 15, 489, 820, 1113, 1271, 1355
HpySE526I ACGT 1 cut(s) 103
Hsp92II CATG 7 cut(s) 437, 732, 814, 989, 1071, 1228, 1238
HspAI GCGC 1 cut(s) 459
KpnI GGTACC 1 cut(s) 484
Ksp22I TGATCA 1 cut(s) 1062
KspAI GTTAAC 1 cut(s) 664
Kzo9I GATC 6 cut(s) 423, 546, 697, 1053, 1062, 1084
LmnI GCTCC 1 cut(s) 577
Lsp1109I GCAGC 4 cut(s) 31, 34, 388, 891
LweI GCATC 2 cut(s) 465, 632
MaeI CTAG 3 cut(s) 171, 468, 569
MaeII ACGT 1 cut(s) 103
MaeIII GTNAC 3 cut(s) 616, 1108, 1213
MalI GATC 6 cut(s) 425, 548, 699, 1055, 1064, 1086
MboI GATC 6 cut(s) 423, 546, 697, 1053, 1062, 1084
MboII GAAGA 8 cut(s) 28, 886, 908, 971, 1183, 1201, 1310, 1352
MfeI CAATTG 1 cut(s) 629
MflI RGATCY 1 cut(s) 1053
MhlI GDGCHC 1 cut(s) 964
MlsI TGGCCA 2 cut(s) 635, 1072
MluNI TGGCCA 2 cut(s) 635, 1072
MlyI GAGTC 4 cut(s) 365, 605, 823, 1105
Mox20I TGGCCA 2 cut(s) 635, 1072
MscI TGGCCA 2 cut(s) 635, 1072
MseI TTAA 3 cut(s) 122, 663, 1325
MslI CAYNNNNRTG 1 cut(s) 611
Msp20I TGGCCA 2 cut(s) 635, 1072
MspI CCGG 1 cut(s) 441
MspR9I CCNGG 2 cut(s) 441, 531
MunI CAATTG 1 cut(s) 629
MvaI CCWGG 1 cut(s) 531
MwoI GCNNNNNNNGC 5 cut(s) 271, 842, 998, 1046, 1289
NciI CCSGG 1 cut(s) 441
NdeII GATC 6 cut(s) 423, 546, 697, 1053, 1062, 1084
NlaIII CATG 7 cut(s) 437, 732, 814, 989, 1071, 1228, 1238
NlaIV GGNNCC 5 cut(s) 439, 482, 963, 1000, 1055
NmuCI GTSAC 3 cut(s) 616, 1108, 1213
NspV TTCGAA 1 cut(s) 189
PagI TCATGA 1 cut(s) 1234
PfeI GAWTC 4 cut(s) 415, 509, 515, 976
PkrI GCNGC 4 cut(s) 21, 24, 403, 906
PleI GAGTC 4 cut(s) 365, 604, 822, 1105
PmaCI CACGTG 1 cut(s) 104
PmlI CACGTG 1 cut(s) 104
PpsI GAGTC 4 cut(s) 365, 604, 822, 1105
Ppu21I YACGTR 1 cut(s) 104
PsiI TTATAA 1 cut(s) 950
Psp6I CCWGG 1 cut(s) 529
PspCI CACGTG 1 cut(s) 104
PspFI CCCAGC 1 cut(s) 1049
PspGI CCWGG 1 cut(s) 529
PspN4I GGNNCC 5 cut(s) 439, 482, 963, 1000, 1055
PspPI GGNCC 3 cut(s) 437, 740, 999
PsuI RGATCY 1 cut(s) 1053
RsaI GTAC 2 cut(s) 293, 482
RsaNI GTAC 2 cut(s) 292, 481
RseI CAYNNNNRTG 1 cut(s) 611
SaqAI TTAA 3 cut(s) 122, 663, 1325
SatI GCNGC 4 cut(s) 20, 23, 402, 905
Sau3AI GATC 6 cut(s) 423, 546, 697, 1053, 1062, 1084
Sau96I GGNCC 3 cut(s) 437, 740, 999
ScaI AGTACT 1 cut(s) 293
SchI GAGTC 4 cut(s) 365, 605, 823, 1105
ScrFI CCNGG 2 cut(s) 441, 531
SduI GDGCHC 1 cut(s) 964
SfaNI GCATC 2 cut(s) 465, 632
SfcI CTRYAG 1 cut(s) 390
SfuI TTCGAA 1 cut(s) 189
SinI GGWCC 2 cut(s) 437, 740
SmiMI CAYNNNNRTG 1 cut(s) 611
SmlI CTYRAG 2 cut(s) 54, 314
SmoI CTYRAG 2 cut(s) 54, 314
SpeI ACTAGT 1 cut(s) 467
SsiI CCGC 3 cut(s) 284, 478, 1080
SspMI CTAG 3 cut(s) 171, 468, 569
StyD4I CCNGG 2 cut(s) 439, 529
StyI CCWWGG 3 cut(s) 383, 419, 831
TaaI ACNGT 1 cut(s) 359
TaiI ACGT 1 cut(s) 106
TaqI TCGA 3 cut(s) 189, 195, 850
TatI WGTACW 1 cut(s) 291
TfiI GAWTC 4 cut(s) 415, 509, 515, 976
Tru1I TTAA 3 cut(s) 122, 663, 1325
Tru9I TTAA 3 cut(s) 122, 663, 1325
TscAI CASTG 3 cut(s) 362, 1047, 1080
TseFI GTSAC 3 cut(s) 616, 1108, 1213
TseI GCWGC 4 cut(s) 19, 22, 401, 904
Tsp45I GTSAC 3 cut(s) 616, 1108, 1213
TspRI CASTG 3 cut(s) 362, 1047, 1080
VpaK11BI GGWCC 2 cut(s) 437, 740
XapI RAATTY 3 cut(s) 212, 1220, 1260
XcmI CCANNNNNNNNNTGG 1 cut(s) 1065
XspI CTAG 3 cut(s) 171, 468, 569
ZrmI AGTACT 1 cut(s) 293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.