MD07G1007500.v1.1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0000135
Physical Location & Seq
Forward (+)
689924 .. 690863
940 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1007500.v1.1.491

Sequence Viewer

Length: 759 bp
ATGCACATCTCTTTTCCAAGGCAATCCAAAGCAGCAAGAAATTGGGCTTTGAATGTCATCAAGTTCTCAACTGAGGAAGTAGGGTTGCCTCAAGGATGTAAAAATTGTAACTTAGTTACCACCTGGGAGATGAACAGAAAGTTCGTCAATGCTACTTTCCTTCTTCAACCACAAATTAAACAGATTTTAGACAAACACCGCCCTCATTGCCATGTTGCAGACACGTTCTTTCCTTGGGCAACAGATGTTGCTGCCAAGTTTGATATTCCCATGATCTTATTTCATGGCATTGGTTTTTTCGCTTTGTGTGCTTCTCTTAGTGTGGTGTTGTATGAGCTTCACGCGAAGCTGTCATCTGATTCAGAAGTTTTTACTATTCCAAATTTTCCAATGGAGATCAAGCTGACAAGAAGCCAAATGCCGACTTTTCCCAAGCAAAGTTCTAAATTCACTATGTTGTTTAAAAAGGCGATGGCGGGCGGGGAAACGAGCTATGGGTTCATTCTCCTAGAAATTGCAGCGGGGCTTAAGGCTTCTGGGCAGGAGTTCATTTGGGTTGTGAAGAGAGAAAAGAATGATAAAGAAGAGTGGCTCATCGAAGGGTTTGAGGAGAGACTGGAAGGTAAAGGACTAATTATAAGAGGTTGGGCTCCGCAAGTGCCGGTTCTTGAGCACGAAGCAACCGGAGCCTTCGTGACTCACTGTGGGTGGAACTCCATCCTTGAAGGAGTGTCTGCTGGGGTGCCAATGATCACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

253

Amino Acids

28.36

Weight (kDa)

7.69

Isoelectric Point (pI)

43.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 171 - 251 1e-14 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 638
AccB1I GGYRCC 1 cut(s) 742
AccII CGCG 1 cut(s) 344
AciI CCGC 5 cut(s) 199, 476, 480, 521, 653
AcsI RAATTY 2 cut(s) 382, 446
AflII CTTAAG 1 cut(s) 527
AflIII ACRYGT 1 cut(s) 222
AgsI TTSAA 3 cut(s) 52, 167, 725
AjnI CCWGG 1 cut(s) 122
AluBI AGCT 4 cut(s) 337, 349, 403, 492
AluI AGCT 4 cut(s) 337, 349, 403, 492
Alw21I GWGCWC 1 cut(s) 675
Alw26I GTCTC 1 cut(s) 607
ApeKI GCWGC 3 cut(s) 32, 251, 518
ApoI RAATTY 2 cut(s) 382, 446
BanI GGYRCC 1 cut(s) 742
BanII GRGCYC 1 cut(s) 652
Bbv12I GWGCWC 1 cut(s) 675
BbvI GCAGC 3 cut(s) 44, 238, 530
BccI CCATC 2 cut(s) 466, 725
BciT130I CCWGG 1 cut(s) 124
BclI TGATCA 1 cut(s) 750
BcoDI GTCTC 1 cut(s) 607
BfaI CTAG 1 cut(s) 509
BfrI CTTAAG 1 cut(s) 527
BisI GCNGC 3 cut(s) 33, 252, 519
BlsI GCNGC 3 cut(s) 34, 253, 520
Bme1390I CCNGG 1 cut(s) 124
BmiI GGNNCC 3 cut(s) 651, 688, 744
BmrFI CCNGG 1 cut(s) 124
BpuEI CTTGAG 2 cut(s) 75, 689
BsaJI CCNNGG 3 cut(s) 17, 123, 233
BsaWI WCCGGW 1 cut(s) 683
BsaXI ACNNNNNCTCC 2 cut(s) 678, 708
Bse118I RCCGGY 1 cut(s) 661
Bse1I ACTGG 1 cut(s) 621
Bse3DI GCAATG 1 cut(s) 205
BseBI CCWGG 1 cut(s) 124
BseDI CCNNGG 3 cut(s) 17, 123, 233
BseGI GGATG 2 cut(s) 101, 717
BseMI GCAATG 1 cut(s) 205
BseMII CTCAG 1 cut(s) 63
BseNI ACTGG 1 cut(s) 621
BseRI GAGGAG 1 cut(s) 623
BseXI GCAGC 3 cut(s) 44, 238, 530
BseYI CCCAGC 1 cut(s) 737
Bsh1236I CGCG 1 cut(s) 344
BshNI GGYRCC 1 cut(s) 742
BsiHKAI GWGCWC 1 cut(s) 675
BsiSI CCGG 2 cut(s) 662, 684
BsmAI GTCTC 1 cut(s) 607
Bsp1286I GDGCHC 2 cut(s) 652, 675
Bsp143I GATC 3 cut(s) 273, 396, 750
BspACI CCGC 5 cut(s) 199, 476, 480, 521, 653
BspCNI CTCAG 1 cut(s) 64
BspFNI CGCG 1 cut(s) 344
BspLI GGNNCC 3 cut(s) 651, 688, 744
BspT107I GGYRCC 1 cut(s) 742
BspTI CTTAAG 1 cut(s) 527
BsrDI GCAATG 1 cut(s) 205
BsrFI RCCGGY 1 cut(s) 661
BsrI ACTGG 1 cut(s) 621
BssAI RCCGGY 1 cut(s) 661
BssECI CCNNGG 3 cut(s) 17, 123, 233
BssMI GATC 3 cut(s) 273, 396, 750
BssT1I CCWWGG 2 cut(s) 17, 233
Bst2UI CCWGG 1 cut(s) 124
Bst4CI ACNGT 1 cut(s) 704
Bst6I CTCTTC 2 cut(s) 557, 579
BstAFI CTTAAG 1 cut(s) 527
BstC8I GCNNGC 1 cut(s) 478
BstDEI CTNAG 3 cut(s) 72, 112, 317
BstF5I GGATG 2 cut(s) 101, 717
BstFNI CGCG 1 cut(s) 344
BstKTI GATC 3 cut(s) 276, 399, 753
BstMAI GTCTC 1 cut(s) 607
BstMBI GATC 3 cut(s) 273, 396, 750
BstMWI GCNNNNNNNGC 3 cut(s) 207, 308, 686
BstNI CCWGG 1 cut(s) 124
BstSCI CCNGG 1 cut(s) 122
BstUI CGCG 1 cut(s) 344
BstV1I GCAGC 3 cut(s) 44, 238, 530
BtgZI GCGATG 1 cut(s) 485
BtsCI GGATG 2 cut(s) 101, 717
BtsIMutI CAGTG 1 cut(s) 700
Cac8I GCNNGC 1 cut(s) 478
Cfr10I RCCGGY 1 cut(s) 661
CviAII CATG 4 cut(s) 212, 271, 284, 756
DdeI CTNAG 3 cut(s) 72, 112, 317
DpnI GATC 3 cut(s) 275, 398, 752
DpnII GATC 3 cut(s) 273, 396, 750
DraI TTTAAA 1 cut(s) 463
Eam1104I CTCTTC 2 cut(s) 557, 579
EarI CTCTTC 2 cut(s) 557, 579
Eco130I CCWWGG 2 cut(s) 17, 233
Eco24I GRGCYC 1 cut(s) 652
EcoRII CCWGG 1 cut(s) 122
EcoT14I CCWWGG 2 cut(s) 17, 233
EcoT38I GRGCYC 1 cut(s) 652
ErhI CCWWGG 2 cut(s) 17, 233
FaeI CATG 4 cut(s) 215, 274, 287, 759
FaiI YATR 8 cut(s) 213, 272, 285, 333, 455, 495, 638, 757
FatI CATG 4 cut(s) 211, 270, 283, 755
FauI CCCGC 3 cut(s) 469, 473, 514
FbaI TGATCA 1 cut(s) 750
Fnu4HI GCNGC 3 cut(s) 33, 252, 519
FokI GGATG 2 cut(s) 108, 704
FriOI GRGCYC 1 cut(s) 652
Fsp4HI GCNGC 3 cut(s) 33, 252, 519
FspBI CTAG 1 cut(s) 509
GluI GCNGC 3 cut(s) 33, 252, 519
GsaI CCCAGC 1 cut(s) 741
HapII CCGG 2 cut(s) 662, 684
Hin1II CATG 4 cut(s) 215, 274, 287, 759
HinfI GANTC 2 cut(s) 359, 697
HpaII CCGG 2 cut(s) 662, 684
Hpy188I TCNGA 2 cut(s) 358, 364
Hpy188III TCNNGA 2 cut(s) 668, 694
HpyAV CCTTC 5 cut(s) 170, 593, 614, 700, 719
HpyCH4III ACNGT 1 cut(s) 704
HpyCH4IV ACGT 1 cut(s) 224
HpyCH4V TGCA 3 cut(s) 4, 218, 518
HpyF10VI GCNNNNNNNGC 3 cut(s) 207, 308, 686
HpyF3I CTNAG 3 cut(s) 72, 112, 317
HpySE526I ACGT 1 cut(s) 224
Hsp92II CATG 4 cut(s) 215, 274, 287, 759
Ksp22I TGATCA 1 cut(s) 750
Kzo9I GATC 3 cut(s) 273, 396, 750
LmnI GCTCC 2 cut(s) 655, 686
LpnPI CCDG 8 cut(s) 109, 136, 522, 527, 602, 675, 697, 723
Lsp1109I GCAGC 3 cut(s) 44, 238, 530
MaeI CTAG 1 cut(s) 509
MaeII ACGT 1 cut(s) 224
MaeIII GTNAC 3 cut(s) 107, 115, 694
MalI GATC 3 cut(s) 275, 398, 752
MboI GATC 3 cut(s) 273, 396, 750
MboII GAAGA 3 cut(s) 155, 574, 596
MhlI GDGCHC 2 cut(s) 652, 675
MluCI AATT 7 cut(s) 40, 103, 174, 382, 446, 513, 633
MlyI GAGTC 1 cut(s) 691
MnlI CCTC 5 cut(s) 67, 99, 213, 601, 635
MseI TTAA 3 cut(s) 177, 462, 528
MslI CAYNNNNRTG 1 cut(s) 210
MspA1I CMGCKG 1 cut(s) 521
MspCI CTTAAG 1 cut(s) 527
MspI CCGG 2 cut(s) 662, 684
MspR9I CCNGG 1 cut(s) 124
MvaI CCWGG 1 cut(s) 124
MvnI CGCG 1 cut(s) 344
MwoI GCNNNNNNNGC 3 cut(s) 207, 308, 686
NdeII GATC 3 cut(s) 273, 396, 750
NlaIII CATG 4 cut(s) 215, 274, 287, 759
NlaIV GGNNCC 3 cut(s) 651, 688, 744
NmuCI GTSAC 1 cut(s) 694
PfeI GAWTC 1 cut(s) 359
PkrI GCNGC 3 cut(s) 34, 253, 520
PleI GAGTC 1 cut(s) 691
PpsI GAGTC 1 cut(s) 691
PsiI TTATAA 1 cut(s) 638
Psp6I CCWGG 1 cut(s) 122
PspFI CCCAGC 1 cut(s) 737
PspGI CCWGG 1 cut(s) 122
PspN4I GGNNCC 3 cut(s) 651, 688, 744
RseI CAYNNNNRTG 1 cut(s) 210
SaqAI TTAA 3 cut(s) 177, 462, 528
SatI GCNGC 3 cut(s) 33, 252, 519
Sau3AI GATC 3 cut(s) 273, 396, 750
SchI GAGTC 1 cut(s) 691
ScrFI CCNGG 1 cut(s) 124
SduI GDGCHC 2 cut(s) 652, 675
SetI ASST 8 cut(s) 125, 227, 339, 351, 405, 494, 625, 646
SmiMI CAYNNNNRTG 1 cut(s) 210
SmlI CTYRAG 3 cut(s) 90, 527, 668
SmoI CTYRAG 3 cut(s) 90, 527, 668
Sse9I AATT 7 cut(s) 40, 103, 174, 382, 446, 513, 633
SsiI CCGC 5 cut(s) 199, 476, 480, 521, 653
SspMI CTAG 1 cut(s) 509
StyD4I CCNGG 1 cut(s) 122
StyI CCWWGG 2 cut(s) 17, 233
TaaI ACNGT 1 cut(s) 704
TaiI ACGT 1 cut(s) 227
TaqI TCGA 1 cut(s) 597
TasI AATT 7 cut(s) 40, 103, 174, 382, 446, 513, 633
TfiI GAWTC 1 cut(s) 359
Tru1I TTAA 3 cut(s) 177, 462, 528
Tru9I TTAA 3 cut(s) 177, 462, 528
TscAI CASTG 1 cut(s) 707
TseFI GTSAC 1 cut(s) 694
TseI GCWGC 3 cut(s) 32, 251, 518
Tsp45I GTSAC 1 cut(s) 694
TspDTI ATGAA 4 cut(s) 146, 272, 490, 538
TspRI CASTG 1 cut(s) 707
Vha464I CTTAAG 1 cut(s) 527
XapI RAATTY 2 cut(s) 382, 446
XspI CTAG 1 cut(s) 509
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.