Rroxscaffold_7G00209260

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000135
Physical Location & Seq
Forward (+)
59542412 .. 59543872
1461 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00209260.1

Sequence Viewer

Length: 1461 bp
ATGGCCATGGAAACCAACTCATGTCAACAGCTTCAAATTTTCTTTCTTCCATACATGGCTCGTGGCCACAGCATACCCCTTATAGACATAGCCAAACTATTTTCTTCTCGTGGTGCAAGATGCACCATAGTAACTACTCCCCTCAATGCCCCGCTCTTCTCCAAAGCAATCCAAAAAAGTGAGATTGAACTTGTTCTCATCAAGTTCCCATCTACTGAAGCTGGGTTGCCTCAAGACTGCGAAAGCGCCGACTTGATTACAACACAAGACACGGTGGAAAAATTTATCAAAGCCACCTTTTTACTTGCACCACAGCTTGAGAAGGTTTTAGACGAACATCGTCCTCATTGCCTTGTTGCTGATACTTTCTTTACTTGGGCTACAGATGTTGCTGCCAAGTTTGGAATTCCAAGGCTGTGCTTCCATGGAATCGGTTTCTTCCCATTGTGTGTTTCACTGAGTGTGATGGTGTATCAACTTCACACGAAGTCGTCGTCTGATTCAGAATCTTTTGTCATTCCTAATCTCCCCGATGAGATCAAGATGCCTAGAAGTCAATTGCCAGTTTTTCCCAATCTAGATGGTAAGTCAGAATTCATGAAGATAGTCAAAGTATCCATAGAGAGCGAAGAAAGGAGCTATGGGGTTATTGTTAACAGCTTTTATGAACTAGAACCAGCTTATGCAGATCATTACAGGAAGGTGTTTGGGAGGAAGGCATGGCATATCGGCCCCGTTTCGTTATGCAATAAGGCAGCAGAGGATAAAGCAGAGAGGGGATCAATAGAAAGCTCGACTGCTGAGAAACATGAGTGCTTGAAATGGCTTGATTCAAAGAAACCCCATTCGGTTGTGTATGTATCATTCGGAAGCTTGCTCCAATTTGCTGATTGTCAGCTGCTAGAAATTGCAATAGGCCTTGAGGCTTCTGGACAAGACTTCGTTTGGGTTGTGAAGAAAGAAAAGAAGGATGTAGAAAACTGGTTGCCTGAAGGATTTGAGAAGAGAATGGAAGGTAAGGGACTGATTATAAGAGATTGGGCTCCCCAAGTGCTGATTCTTGAGCATGAAGCAATAGGAGCATTTGTGACTCACTGTGGGTGGAACTCTATCCTAGAAGGAGTGTCTGCCGGAGTTCCAATGATCACGTGGCCGATGTTCGGCGAGCAGTTTTACAATGAGAAGTTGGTGACTGAGATACATAGGATTGGCGTTCCTGTTGGTTCTGAAAAATGGGTTTTATCATTTGTGGATGTAAGTGCGGAAACAGAAGCGAGTGTGAGGAGGGAGGCCATAGAGGTGGCTGTGACTAGAATCATGGTGGGTGATGAAGCAGTGGAAATAAGAAGCAGAGTTAAAGAACTTGGAGAGAAGGCAAGGAGGGCTGTTGAAGAAGGTGGCTCATCTTTCTTGGATTTATCTGCTCTAGTTGGAGAGTTGAACCACCTTCTGAAGGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

486

Amino Acids

54.3

Weight (kDa)

5.51

Isoelectric Point (pI)

44.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 267 - 398 1.3e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1031
AccBSI CCGCTC 1 cut(s) 154
AciI CCGC 2 cut(s) 152, 1262
AclWI GGATC 1 cut(s) 787
AcoI YGGCCR 3 cut(s) 3, 64, 1151
AcsI RAATTY 4 cut(s) 36, 281, 405, 593
AcuI CTGAAG 2 cut(s) 237, 1011
AcvI CACGTG 1 cut(s) 1149
AdeI CACNNNGTG 1 cut(s) 461
AfiI CCNNNNNNNGG 2 cut(s) 1160, 1453
AgsI TTSAA 6 cut(s) 35, 188, 820, 834, 1391, 1441
AjuI GAANNNNNNNTTGG 2 cut(s) 1041, 1073
AluBI AGCT 9 cut(s) 31, 221, 316, 639, 660, 680, 792, 873, 898
AluI AGCT 9 cut(s) 31, 221, 316, 639, 660, 680, 792, 873, 898
AlwI GGATC 1 cut(s) 787
AoxI GGCC 7 cut(s) 3, 64, 730, 916, 1151, 1290, 1455
ApeKI GCWGC 3 cut(s) 392, 755, 898
ApoI RAATTY 4 cut(s) 36, 281, 405, 593
ArsI GACNNNNNNTTYG 2 cut(s) 479, 511
Asp700I GAANNNNTTC 1 cut(s) 192
AspLEI GCGC 1 cut(s) 248
AspS9I GGNCC 1 cut(s) 731
AsuHPI GGTGA 2 cut(s) 1201, 1337
BalI TGGCCA 2 cut(s) 5, 66
BanII GRGCYC 1 cut(s) 1045
BauI CACGAG 2 cut(s) 60, 108
BbrPI CACGTG 1 cut(s) 1149
BbvI GCAGC 3 cut(s) 379, 767, 885
BccI CCATC 3 cut(s) 217, 460, 575
BciVI GTATCC 1 cut(s) 625
BclI TGATCA 1 cut(s) 1143
BfaI CTAG 8 cut(s) 549, 578, 671, 902, 1115, 1311, 1427, 1459
BfmI CTRYAG 1 cut(s) 381
BfoI RGCGCY 1 cut(s) 249
BfuI GTATCC 1 cut(s) 625
BisI GCNGC 3 cut(s) 393, 756, 899
BlsI GCNGC 3 cut(s) 394, 757, 900
BmgT120I GGNCC 1 cut(s) 731
BmiI GGNNCC 2 cut(s) 733, 1044
BmsI GCATC 2 cut(s) 110, 534
BpuEI CTTGAG 4 cut(s) 216, 338, 941, 1082
BsaAI YACGTR 1 cut(s) 1149
BsaJI CCNNGG 3 cut(s) 6, 410, 424
BsaXI ACNNNNNCTCC 2 cut(s) 1071, 1101
Bsc4I CCNNNNNNNGG 2 cut(s) 1160, 1453
Bse1I ACTGG 2 cut(s) 563, 986
Bse3DI GCAATG 1 cut(s) 346
BseDI CCNNGG 3 cut(s) 6, 410, 424
BseGI GGATG 2 cut(s) 976, 1258
BseLI CCNNNNNNNGG 2 cut(s) 1160, 1453
BseMI GCAATG 1 cut(s) 346
BseMII CTCAG 3 cut(s) 449, 792, 1185
BseNI ACTGG 2 cut(s) 563, 986
BseRI GAGGAG 1 cut(s) 1297
BseXI GCAGC 3 cut(s) 379, 767, 885
BseYI CCCAGC 1 cut(s) 221
BshFI GGCC 7 cut(s) 5, 66, 732, 918, 1153, 1292, 1457
BsiSI CCGG 1 cut(s) 1131
BslFI GGGAC 1 cut(s) 1035
BslI CCNNNNNNNGG 2 cut(s) 1160, 1453
BsmFI GGGAC 1 cut(s) 1035
BsnI GGCC 7 cut(s) 5, 66, 732, 918, 1153, 1292, 1457
Bsp1286I GDGCHC 1 cut(s) 1045
Bsp143I GATC 4 cut(s) 537, 688, 779, 1143
Bsp19I CCATGG 2 cut(s) 6, 424
BspACI CCGC 2 cut(s) 152, 1262
BspANI GGCC 7 cut(s) 5, 66, 732, 918, 1153, 1292, 1457
BspCNI CTCAG 3 cut(s) 450, 793, 1186
BspHI TCATGA 1 cut(s) 597
BspLI GGNNCC 2 cut(s) 733, 1044
BspPI GGATC 1 cut(s) 787
BspQI GCTCTTC 1 cut(s) 161
BsrBI CCGCTC 1 cut(s) 154
BsrDI GCAATG 1 cut(s) 346
BsrI ACTGG 2 cut(s) 563, 986
BssECI CCNNGG 3 cut(s) 6, 410, 424
BssMI GATC 4 cut(s) 537, 688, 779, 1143
BssSI CACGAG 2 cut(s) 60, 108
BssT1I CCWWGG 3 cut(s) 6, 410, 424
Bst2BI CACGAG 2 cut(s) 60, 108
Bst4CI ACNGT 2 cut(s) 274, 1097
Bst6I CTCTTC 2 cut(s) 161, 998
BstBAI YACGTR 1 cut(s) 1149
BstC8I GCNNGC 2 cut(s) 875, 1166
BstDEI CTNAG 3 cut(s) 458, 801, 1194
BstDSI CCRYGG 2 cut(s) 6, 424
BstENI CCTNNNNNAGG 1 cut(s) 1451
BstF5I GGATG 2 cut(s) 976, 1258
BstH2I RGCGCY 1 cut(s) 249
BstHHI GCGC 1 cut(s) 248
BstKTI GATC 4 cut(s) 540, 691, 782, 1146
BstMBI GATC 4 cut(s) 537, 688, 779, 1143
BstMWI GCNNNNNNNGC 2 cut(s) 1079, 1382
BstSFI CTRYAG 1 cut(s) 381
BstV1I GCAGC 3 cut(s) 379, 767, 885
BstXI CCANNNNNNTGG 1 cut(s) 1300
BsuI GTATCC 1 cut(s) 625
BsuRI GGCC 7 cut(s) 5, 66, 732, 918, 1153, 1292, 1457
BtgI CCRYGG 2 cut(s) 6, 424
BtsCI GGATG 2 cut(s) 976, 1258
BtsI GCAGTG 1 cut(s) 1341
BtsIMutI CAGTG 3 cut(s) 455, 1093, 1341
Cac8I GCNNGC 2 cut(s) 875, 1166
CciI TCATGA 1 cut(s) 597
CfoI GCGC 1 cut(s) 248
Cfr13I GGNCC 1 cut(s) 731
CviAII CATG 9 cut(s) 7, 21, 55, 425, 598, 720, 809, 1067, 1318
DdeI CTNAG 3 cut(s) 458, 801, 1194
DpnI GATC 4 cut(s) 539, 690, 781, 1145
DpnII GATC 4 cut(s) 537, 688, 779, 1143
DraIII CACNNNGTG 1 cut(s) 461
EaeI YGGCCR 3 cut(s) 3, 64, 1151
Eam1104I CTCTTC 2 cut(s) 161, 998
EarI CTCTTC 2 cut(s) 161, 998
Eco130I CCWWGG 3 cut(s) 6, 410, 424
Eco147I AGGCCT 2 cut(s) 918, 1457
Eco24I GRGCYC 1 cut(s) 1045
Eco57I CTGAAG 2 cut(s) 237, 1011
Eco72I CACGTG 1 cut(s) 1149
EcoNI CCTNNNNNAGG 1 cut(s) 1451
EcoRI GAATTC 2 cut(s) 405, 593
EcoT14I CCWWGG 3 cut(s) 6, 410, 424
EcoT38I GRGCYC 1 cut(s) 1045
ErhI CCWWGG 3 cut(s) 6, 410, 424
FaeI CATG 9 cut(s) 10, 24, 58, 428, 601, 723, 812, 1070, 1321
FaqI GGGAC 1 cut(s) 1035
FatI CATG 9 cut(s) 6, 20, 54, 424, 597, 719, 808, 1066, 1317
FauI CCCGC 1 cut(s) 159
FbaI TGATCA 1 cut(s) 1143
Fnu4HI GCNGC 3 cut(s) 393, 756, 899
FokI GGATG 2 cut(s) 983, 1265
FriOI GRGCYC 1 cut(s) 1045
Fsp4HI GCNGC 3 cut(s) 393, 756, 899
FspBI CTAG 8 cut(s) 549, 578, 671, 902, 1115, 1311, 1427, 1459
GlaI GCGC 1 cut(s) 247
GluI GCNGC 3 cut(s) 393, 756, 899
GsaI CCCAGC 1 cut(s) 225
HaeII RGCGCY 1 cut(s) 249
HaeIII GGCC 7 cut(s) 5, 66, 732, 918, 1153, 1292, 1457
HapII CCGG 1 cut(s) 1131
HhaI GCGC 1 cut(s) 248
Hin1II CATG 9 cut(s) 10, 24, 58, 428, 601, 723, 812, 1070, 1321
Hin6I GCGC 1 cut(s) 246
HinP1I GCGC 1 cut(s) 246
HincII GTYRAC 2 cut(s) 26, 655
HindII GTYRAC 2 cut(s) 26, 655
HindIII AAGCTT 1 cut(s) 871
HinfI GANTC 7 cut(s) 429, 500, 506, 830, 1057, 1090, 1314
HpaI GTTAAC 1 cut(s) 655
HpaII CCGG 1 cut(s) 1131
HphI GGTGA 2 cut(s) 1201, 1337
Hpy166II GTNNAC 2 cut(s) 26, 655
Hpy188I TCNGA 6 cut(s) 499, 505, 592, 869, 1228, 1452
Hpy188III TCNNGA 6 cut(s) 233, 541, 578, 598, 930, 1061
Hpy8I GTNNAC 2 cut(s) 26, 655
Hpy99I CGWCG 1 cut(s) 496
HpyCH4III ACNGT 2 cut(s) 274, 1097
HpyCH4IV ACGT 1 cut(s) 1148
HpyCH4V TGCA 6 cut(s) 116, 123, 308, 686, 747, 911
HpyF10VI GCNNNNNNNGC 2 cut(s) 1079, 1382
HpyF3I CTNAG 3 cut(s) 458, 801, 1194
HpySE526I ACGT 1 cut(s) 1148
Hsp92II CATG 9 cut(s) 10, 24, 58, 428, 601, 723, 812, 1070, 1321
HspAI GCGC 1 cut(s) 246
Ksp22I TGATCA 1 cut(s) 1143
KspAI GTTAAC 1 cut(s) 655
Kzo9I GATC 4 cut(s) 537, 688, 779, 1143
LguI GCTCTTC 1 cut(s) 161
LmnI GCTCC 4 cut(s) 636, 882, 1048, 1079
LpnPI CCDG 9 cut(s) 207, 576, 682, 690, 915, 967, 1002, 1144, 1230
Lsp1109I GCAGC 3 cut(s) 379, 767, 885
LweI GCATC 2 cut(s) 110, 534
MaeI CTAG 8 cut(s) 549, 578, 671, 902, 1115, 1311, 1427, 1459
MaeII ACGT 1 cut(s) 1148
MaeIII GTNAC 4 cut(s) 130, 1087, 1189, 1306
MalI GATC 4 cut(s) 539, 690, 781, 1145
MbiI CCGCTC 1 cut(s) 154
MboI GATC 4 cut(s) 537, 688, 779, 1143
MboII GAAGA 9 cut(s) 38, 96, 148, 430, 613, 641, 967, 1015, 1403
MfeI CAATTG 1 cut(s) 557
MhlI GDGCHC 1 cut(s) 1045
MlsI TGGCCA 2 cut(s) 5, 66
MluCI AATT 7 cut(s) 36, 281, 405, 557, 593, 881, 906
MluNI TGGCCA 2 cut(s) 5, 66
MlyI GAGTC 1 cut(s) 1084
MmeI TCCRAC 1 cut(s) 1411
Mox20I TGGCCA 2 cut(s) 5, 66
MroXI GAANNNNTTC 1 cut(s) 192
MscI TGGCCA 2 cut(s) 5, 66
MseI TTAA 2 cut(s) 654, 1356
MslI CAYNNNNRTG 1 cut(s) 1298
Msp20I TGGCCA 2 cut(s) 5, 66
MspA1I CMGCKG 1 cut(s) 898
MspI CCGG 1 cut(s) 1131
MunI CAATTG 1 cut(s) 557
MwoI GCNNNNNNNGC 2 cut(s) 1079, 1382
NcoI CCATGG 2 cut(s) 6, 424
NdeII GATC 4 cut(s) 537, 688, 779, 1143
NlaIII CATG 9 cut(s) 10, 24, 58, 428, 601, 723, 812, 1070, 1321
NlaIV GGNNCC 2 cut(s) 733, 1044
NmuCI GTSAC 3 cut(s) 1087, 1189, 1306
PagI TCATGA 1 cut(s) 597
PceI AGGCCT 2 cut(s) 918, 1457
PciSI GCTCTTC 1 cut(s) 161
PcsI WCGNNNNNNNCGW 1 cut(s) 491
PdmI GAANNNNTTC 1 cut(s) 192
PfeI GAWTC 6 cut(s) 429, 500, 506, 830, 1057, 1314
PkrI GCNGC 3 cut(s) 394, 757, 900
PleI GAGTC 1 cut(s) 1084
PmaCI CACGTG 1 cut(s) 1149
PmlI CACGTG 1 cut(s) 1149
PpsI GAGTC 1 cut(s) 1084
Ppu21I YACGTR 1 cut(s) 1149
PsiI TTATAA 1 cut(s) 1031
PspCI CACGTG 1 cut(s) 1149
PspFI CCCAGC 1 cut(s) 221
PspN4I GGNNCC 2 cut(s) 733, 1044
PspPI GGNCC 1 cut(s) 731
PvuII CAGCTG 1 cut(s) 898
RseI CAYNNNNRTG 1 cut(s) 1298
SapI GCTCTTC 1 cut(s) 161
SaqAI TTAA 2 cut(s) 654, 1356
SatI GCNGC 3 cut(s) 393, 756, 899
Sau3AI GATC 4 cut(s) 537, 688, 779, 1143
Sau96I GGNCC 1 cut(s) 731
SchI GAGTC 1 cut(s) 1084
SduI GDGCHC 1 cut(s) 1045
SfaNI GCATC 2 cut(s) 110, 534
SfcI CTRYAG 1 cut(s) 381
SmiMI CAYNNNNRTG 1 cut(s) 1298
SmlI CTYRAG 4 cut(s) 231, 317, 920, 1061
SmoI CTYRAG 4 cut(s) 231, 317, 920, 1061
Sse9I AATT 7 cut(s) 36, 281, 405, 557, 593, 881, 906
SseBI AGGCCT 2 cut(s) 918, 1457
SsiI CCGC 2 cut(s) 152, 1262
SspMI CTAG 8 cut(s) 549, 578, 671, 902, 1115, 1311, 1427, 1459
StuI AGGCCT 2 cut(s) 918, 1457
StyI CCWWGG 3 cut(s) 6, 410, 424
TaaI ACNGT 2 cut(s) 274, 1097
TaiI ACGT 1 cut(s) 1151
TaqI TCGA 1 cut(s) 794
TasI AATT 7 cut(s) 36, 281, 405, 557, 593, 881, 906
TfiI GAWTC 6 cut(s) 429, 500, 506, 830, 1057, 1314
Tru1I TTAA 2 cut(s) 654, 1356
Tru9I TTAA 2 cut(s) 654, 1356
TscAI CASTG 3 cut(s) 462, 1100, 1341
TseFI GTSAC 3 cut(s) 1087, 1189, 1306
TseI GCWGC 3 cut(s) 392, 755, 898
Tsp45I GTSAC 3 cut(s) 1087, 1189, 1306
TspDTI ATGAA 5 cut(s) 586, 614, 681, 1083, 1344
TspRI CASTG 3 cut(s) 462, 1100, 1341
XagI CCTNNNNNAGG 1 cut(s) 1451
XapI RAATTY 4 cut(s) 36, 281, 405, 593
XbaI TCTAGA 1 cut(s) 577
XcmI CCANNNNNNNNNTGG 1 cut(s) 1146
XmnI GAANNNNTTC 1 cut(s) 192
XspI CTAG 8 cut(s) 549, 578, 671, 902, 1115, 1311, 1427, 1459
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.