FvH4_2g05662

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
4622254 .. 4622649
396 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g05662.t1

Sequence Viewer

Length: 396 bp
ATGGAAATTAAAACTGATCAGCTGCTTCACATTTTCTTCCTTCCATATATGGCTCCAGGGCACACTCTACCCCTCATGGACATAGTCAAACTATTTGCTTCACCTGGTGTAAAAGTCACCATAATAACCACCACTGTCGATGCAAAACTTATCACCATGCCAATCCAAACAAGCAAAAATTTGGGTTTTGATATTGAACTTCTTGTCTTCAAATTCCCATCTGTCGAAGCAGGGTTGGTTGACGGACCTGAAACCTCTAACTTAGCAACAACCCAAGAGACGAAGGAAAAGTTTTTGAAAGCTATGAGTCTGATTGAACCAAAGGTGGAGCAGACTTTAGACCAACATCGCCCTCACTTCCTTGTTGCAGACTCTATGGACGGGTGCGCTGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

132

Amino Acids

14.5

Weight (kDa)

5.24

Isoelectric Point (pI)

41.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 178, 212
AdeI CACNNNGTG 1 cut(s) 107
AgsI TTSAA 4 cut(s) 197, 211, 298, 317
AjnI CCWGG 2 cut(s) 55, 103
AluBI AGCT 2 cut(s) 22, 302
AluI AGCT 2 cut(s) 22, 302
Alw26I GTCTC 1 cut(s) 272
ApeKI GCWGC 1 cut(s) 22
ApoI RAATTY 2 cut(s) 178, 212
AspLEI GCGC 1 cut(s) 389
AspS9I GGNCC 1 cut(s) 245
AsuHPI GGTGA 3 cut(s) 93, 109, 145
AvaII GGWCC 1 cut(s) 245
BaeGI GKGCMC 1 cut(s) 63
BbsI GAAGAC 1 cut(s) 199
BbvI GCAGC 1 cut(s) 9
BccI CCATC 1 cut(s) 226
BciT130I CCWGG 2 cut(s) 57, 105
BclI TGATCA 1 cut(s) 16
BcoDI GTCTC 1 cut(s) 272
BisI GCNGC 1 cut(s) 23
BlsI GCNGC 1 cut(s) 24
Bme1390I CCNGG 2 cut(s) 57, 105
Bme18I GGWCC 1 cut(s) 245
BmgT120I GGNCC 1 cut(s) 245
BmiI GGNNCC 1 cut(s) 54
BmrFI CCNGG 2 cut(s) 57, 105
BmsI GCATC 1 cut(s) 130
BpiI GAAGAC 1 cut(s) 199
BpmI CTGGAG 1 cut(s) 39
BsaJI CCNNGG 1 cut(s) 56
BseBI CCWGG 2 cut(s) 57, 105
BseDI CCNNGG 1 cut(s) 56
BseSI GKGCMC 1 cut(s) 63
BseXI GCAGC 1 cut(s) 9
BsmAI GTCTC 1 cut(s) 272
BsmBI CGTCTC 1 cut(s) 272
Bsp1286I GDGCHC 1 cut(s) 63
Bsp143I GATC 1 cut(s) 16
BspLI GGNNCC 1 cut(s) 54
BssECI CCNNGG 1 cut(s) 56
BssMI GATC 1 cut(s) 16
Bst2UI CCWGG 2 cut(s) 57, 105
Bst4CI ACNGT 1 cut(s) 136
BstDEI CTNAG 1 cut(s) 262
BstHHI GCGC 1 cut(s) 389
BstKTI GATC 1 cut(s) 19
BstMAI GTCTC 1 cut(s) 272
BstMBI GATC 1 cut(s) 16
BstNI CCWGG 2 cut(s) 57, 105
BstSCI CCNGG 2 cut(s) 55, 103
BstSLI GKGCMC 1 cut(s) 63
BstV1I GCAGC 1 cut(s) 9
BstV2I GAAGAC 1 cut(s) 199
BtgZI GCGATG 1 cut(s) 332
BtsIMutI CAGTG 1 cut(s) 132
CfoI GCGC 1 cut(s) 389
Cfr13I GGNCC 1 cut(s) 245
CsiI ACCWGGT 1 cut(s) 103
CviAII CATG 2 cut(s) 76, 157
CviJI RGCY 3 cut(s) 22, 53, 302
CviKI_1 RGCY 3 cut(s) 22, 53, 302
DdeI CTNAG 1 cut(s) 262
DpnI GATC 1 cut(s) 18
DpnII GATC 1 cut(s) 16
DraIII CACNNNGTG 1 cut(s) 107
Eco47I GGWCC 1 cut(s) 245
EcoRII CCWGG 2 cut(s) 55, 103
Esp3I CGTCTC 1 cut(s) 272
FaeI CATG 2 cut(s) 79, 160
FatI CATG 2 cut(s) 75, 156
FbaI TGATCA 1 cut(s) 16
Fnu4HI GCNGC 1 cut(s) 23
Fsp4HI GCNGC 1 cut(s) 23
GlaI GCGC 1 cut(s) 388
GluI GCNGC 1 cut(s) 23
GsuI CTGGAG 1 cut(s) 39
HhaI GCGC 1 cut(s) 389
Hin1II CATG 2 cut(s) 79, 160
Hin6I GCGC 1 cut(s) 387
HinP1I GCGC 1 cut(s) 387
HincII GTYRAC 1 cut(s) 241
HindII GTYRAC 1 cut(s) 241
HinfI GANTC 2 cut(s) 307, 371
HphI GGTGA 3 cut(s) 93, 109, 145
Hpy166II GTNNAC 1 cut(s) 241
Hpy188I TCNGA 1 cut(s) 312
Hpy8I GTNNAC 1 cut(s) 241
HpyAV CCTTC 2 cut(s) 50, 277
HpyCH4III ACNGT 1 cut(s) 136
HpyCH4V TGCA 2 cut(s) 143, 368
HpyF3I CTNAG 1 cut(s) 262
Hsp92II CATG 2 cut(s) 79, 160
HspAI GCGC 1 cut(s) 387
Ksp22I TGATCA 1 cut(s) 16
Kzo9I GATC 1 cut(s) 16
LmnI GCTCC 2 cut(s) 58, 328
LpnPI CCDG 6 cut(s) 42, 69, 90, 117, 216, 261
Lsp1109I GCAGC 1 cut(s) 9
LweI GCATC 1 cut(s) 130
MabI ACCWGGT 1 cut(s) 103
MaeIII GTNAC 1 cut(s) 115
MalI GATC 1 cut(s) 18
MboI GATC 1 cut(s) 16
MboII GAAGA 2 cut(s) 28, 199
MhlI GDGCHC 1 cut(s) 63
MluCI AATT 3 cut(s) 6, 178, 212
MlyI GAGTC 2 cut(s) 316, 365
MnlI CCTC 3 cut(s) 83, 265, 363
MseI TTAA 1 cut(s) 9
MspA1I CMGCKG 1 cut(s) 22
MspR9I CCNGG 2 cut(s) 57, 105
MvaI CCWGG 2 cut(s) 57, 105
NdeII GATC 1 cut(s) 16
NlaIII CATG 2 cut(s) 79, 160
NlaIV GGNNCC 1 cut(s) 54
NmuCI GTSAC 1 cut(s) 115
PflFI GACNNNGTC 1 cut(s) 83
PkrI GCNGC 1 cut(s) 24
PleI GAGTC 2 cut(s) 315, 365
PpsI GAGTC 2 cut(s) 315, 365
Psp6I CCWGG 2 cut(s) 55, 103
PspGI CCWGG 2 cut(s) 55, 103
PspN4I GGNNCC 1 cut(s) 54
PspPI GGNCC 1 cut(s) 245
PsyI GACNNNGTC 1 cut(s) 83
PvuII CAGCTG 1 cut(s) 22
SaqAI TTAA 1 cut(s) 9
SatI GCNGC 1 cut(s) 23
Sau3AI GATC 1 cut(s) 16
Sau96I GGNCC 1 cut(s) 245
SchI GAGTC 2 cut(s) 316, 365
ScrFI CCNGG 2 cut(s) 57, 105
SduI GDGCHC 1 cut(s) 63
SetI ASST 6 cut(s) 24, 106, 250, 257, 304, 327
SexAI ACCWGGT 1 cut(s) 103
SfaNI GCATC 1 cut(s) 130
SinI GGWCC 1 cut(s) 245
Sse9I AATT 3 cut(s) 6, 178, 212
StyD4I CCNGG 2 cut(s) 55, 103
TaaI ACNGT 1 cut(s) 136
TaqI TCGA 2 cut(s) 138, 225
TasI AATT 3 cut(s) 6, 178, 212
Tru1I TTAA 1 cut(s) 9
Tru9I TTAA 1 cut(s) 9
TscAI CASTG 1 cut(s) 139
TseFI GTSAC 1 cut(s) 115
TseI GCWGC 1 cut(s) 22
Tsp45I GTSAC 1 cut(s) 115
TspGWI ACGGA 1 cut(s) 258
TspRI CASTG 1 cut(s) 139
Tth111I GACNNNGTC 1 cut(s) 83
VpaK11BI GGWCC 1 cut(s) 245
XapI RAATTY 2 cut(s) 178, 212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.