Rorug05G0563600

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000135
Physical Location & Seq
Forward (+)
75519908 .. 75523335
3428 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0563600.1

Sequence Viewer

Length: 2004 bp
ATGCTTGACTCAGGAAATTTTGTTCTGGCTAACCAAAATTCAACCAGTTCGTGGGAGAGTTTTAATCGACCAACTGATACAATCCTGCCCACACAGACTCTTAGCAAAGGTAGCATACTCTATGCTCCCTATACGAAAACAAATTACTCAAAGGGAAGGTTCATGCTTACACTGCAATCTGATGGTAATTTTGTGTTTTATACAACTTTTTTCCCATTGGATTCTCCTAATGTTGATTACTGGTACACGGAAACTGAGGGTAGTGGCTTTGAGGTCATCTTCAACCAGTCTGGCTCTATTTACGTTACAGCGCAGAATGGAAGCATAATTTATGTGTTATCATCAAATGCAGTTTCAACGCAAGATTACTACCAGAGAGCAACTCTAGATTATGATGGAGTTTTGAGGCACTATATCTACCCCAAGAGTAACTCAAGCATCGAAAAGGCTTGGTCTACTTTGATCTTTACACCTCCGAATATCTGCACATCAGTGTTGGAAATTACAGGTGGTGGTGCATGTGGATTCAACAGCTTATGCAGAAATGATGATCTTGAAGGACCAAGTTGCCAGTGCCCCGATGGTTACAACTTCACTGATCCGAATGATTTGTTGAAAGGATGCAAACAGGGATTTGTTTCACAAAGTTGTGAGGAAGCATCACAAGAAACAGATCTTTTCTATCTTCACGAAATGCGAAGTACAGATTGGGCTACAAGTGCTAACTATGAGTACTTTCAGCCGGTAACTGAGGATTGGTGCAGACGGTCTTGCCTAGGTGATTGTTTTTGTGACATTGCCTTTTACAAAGACCAGATTTGTTGGAAGAAGAGTATTCCTCTTTCGAATGGGAGAATTGACCGCAGTAGTGATTGGAAAGCTCTGGTCAAAATCAGGAATCAGAATTCCAGTTCGAAGATTACAGGAGCAGAAACAGGAAAGAAAGATAATTCGACTTTGATCCTCCAGGGATTGGCATTCCTGATCAGTAGCTCACTGTTTTTGTTCCTCTGCTTGATAGCAACATGTTTGCTTGTCTATCGTATATATAATAGAATTGCAAAGGTGAGTAAACTCTACCCCACCATTGAAGGTGTTAATCTCAGATGTTTCACATACATGGAGCTAAAAGAAGCTACTGATGGATTCAAGAATGAACTCGGTCGTGGTGCTTTTGCAACAGTTTTCAAAGGAGTTTTAGTGTCTGATAATCGGAAATATGTTGCTGTAAAAAGGTTAATGGACACTATGCTTAGAGAGAATGATCCGGAGTTCAAAGCCGAAGTAAGCACAATTGGCAGAACAAATCACAGAAATCTAGTCCAATTACTAGGCTTCTGCAACGAGGGGCAGCACCGAATTCTTGTATATGAGCTGATGAGCAACGGCACACTAGCAAGCTTCCTCTTTGGGGAGTCGAAGCTAAACTGGCACCGCAGAAAGAAAATTGCCTTGGGAATTGCAAGAGGGCTCTTGTATTTGCATGAAGACTGCAGCAGCCAGATTATACATTGTGACATCAAGCCTGAGAACGTTCTTCTAGATGACACTTTCACAGCCAGAATTGCAGACTTTGGATTAGCCAAGCTTTTGAGGACGGATCAAACTCGAACCATCACTGCAATCAGGGGAACAAAAGGTTATGTGGCTCCTGAATGGTTCAAAGCCTTGCCTATCACTGTTAAGGTGGATGTTTACAGCTATGGAATTTTGTTGTTAGAGATTATCTGCTGTAGGAAGCGTTTTGTAGCGGAGGCAACCGATGAAAATGAAATGATATTAGCTGATTGGGCATATGATTGCTATAACCAAAGAAAACTCCATTTGCTACTGGACAGTGATGATGAAGCAATGGATGACATAAGGAAGATGGAGAAGTGTGTGATGACTGCATTATGGTGCATTCAACAGGATCCATCGCTGAGACCTACGATGAAGGATGTCACGCAGATGCTTGAAGGAACTGTTGAAATCTCAATTCCACCAAATCCATCATTTTCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

667

Amino Acids

75.55

Weight (kDa)

5.61

Isoelectric Point (pI)

36.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 1 - 35 1.1e-06 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 383 - 652 3.9e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 384 - 650 5.2e-50 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1431
AccB7I CCANNNNNTGG 2 cut(s) 51, 973
AccI GTMKAC 1 cut(s) 455
AccIII TCCGGA 1 cut(s) 1267
AciI CCGC 3 cut(s) 862, 1435, 1751
AclI AACGTT 1 cut(s) 1533
AclWI GGATC 6 cut(s) 593, 955, 1259, 1608, 1907, 1920
AcsI RAATTY 5 cut(s) 16, 37, 904, 1359, 1707
AfaI GTAC 3 cut(s) 245, 703, 734
AfiI CCNNNNNNNGG 3 cut(s) 51, 973, 1411
AflIII ACRYGT 1 cut(s) 1025
AjnI CCWGG 1 cut(s) 966
AjuI GAANNNNNNNTTGG 4 cut(s) 691, 723, 1436, 1468
AleI CACNNNNGTG 1 cut(s) 491
AloI GAACNNNNNNTCC 1 cut(s) 38
Alw26I GTCTC 1 cut(s) 1918
AlwI GGATC 6 cut(s) 593, 955, 1259, 1608, 1907, 1920
Aor13HI TCCGGA 1 cut(s) 1267
ApeKI GCWGC 3 cut(s) 1351, 1494, 1497
ApoI RAATTY 5 cut(s) 16, 37, 904, 1359, 1707
AspA2I CCTAGG 1 cut(s) 775
AspLEI GCGC 1 cut(s) 313
AspS9I GGNCC 1 cut(s) 560
AsuHPI GGTGA 2 cut(s) 791, 1078
AsuII TTCGAA 2 cut(s) 845, 914
AvaII GGWCC 1 cut(s) 560
AvrII CCTAGG 1 cut(s) 775
BaeGI GKGCMC 1 cut(s) 578
BamHI GGATCC 1 cut(s) 1912
BanI GGYRCC 1 cut(s) 1431
BanII GRGCYC 1 cut(s) 1473
BbsI GAAGAC 1 cut(s) 1494
BbvI GCAGC 3 cut(s) 1363, 1506, 1509
BccI CCATC 8 cut(s) 176, 389, 575, 1136, 1622, 1864, 1924, 1999
BceAI ACGGC 1 cut(s) 1402
BciT130I CCWGG 1 cut(s) 968
BclI TGATCA 1 cut(s) 984
BcoDI GTCTC 1 cut(s) 1918
BfaI CTAG 6 cut(s) 386, 776, 1319, 1331, 1394, 1541
BfmI CTRYAG 2 cut(s) 1492, 1732
BglII AGATCT 1 cut(s) 673
BisI GCNGC 3 cut(s) 1352, 1495, 1498
BlnI CCTAGG 1 cut(s) 775
BlsI GCNGC 3 cut(s) 1353, 1496, 1499
BmcAI AGTACT 1 cut(s) 734
Bme1390I CCNGG 1 cut(s) 968
Bme18I GGWCC 1 cut(s) 560
BmgT120I GGNCC 1 cut(s) 560
BmiI GGNNCC 3 cut(s) 1433, 1650, 1914
BmrFI CCNGG 1 cut(s) 968
BmsI GCATC 4 cut(s) 447, 611, 668, 1941
BpiI GAAGAC 1 cut(s) 1494
BplI GAGNNNNNCTC 4 cut(s) 367, 399, 823, 855
BpmI CTGGAG 1 cut(s) 950
Bpu14I TTCGAA 2 cut(s) 845, 914
BpuEI CTTGAG 1 cut(s) 418
BsaI GGTCTC 1 cut(s) 1918
BsaJI CCNNGG 3 cut(s) 775, 967, 1452
BsaWI WCCGGW 1 cut(s) 1267
BsaXI ACNNNNNCTCC 2 cut(s) 1185, 1215
Bsc4I CCNNNNNNNGG 3 cut(s) 51, 973, 1411
Bse118I RCCGGY 1 cut(s) 742
Bse1I ACTGG 7 cut(s) 45, 245, 286, 571, 909, 1433, 1836
Bse3DI GCAATG 2 cut(s) 795, 1857
BseAI TCCGGA 1 cut(s) 1267
BseBI CCWGG 1 cut(s) 968
BseDI CCNNGG 3 cut(s) 775, 967, 1452
BseGI GGATG 4 cut(s) 626, 1696, 1861, 1945
BseLI CCNNNNNNNGG 3 cut(s) 51, 973, 1411
BseMI GCAATG 2 cut(s) 795, 1857
BseMII CTCAG 6 cut(s) 24, 246, 741, 1117, 1518, 1913
BseNI ACTGG 7 cut(s) 45, 245, 286, 571, 909, 1433, 1836
BseSI GKGCMC 1 cut(s) 578
BseXI GCAGC 3 cut(s) 1363, 1506, 1509
BsgI GTGCAG 2 cut(s) 469, 781
Bsh1285I CGRYCG 1 cut(s) 1165
BshNI GGYRCC 1 cut(s) 1431
BsiEI CGRYCG 1 cut(s) 1165
BsiSI CCGG 2 cut(s) 743, 1268
BslI CCNNNNNNNGG 3 cut(s) 51, 973, 1411
BsmAI GTCTC 1 cut(s) 1918
BsmI GAATGC 2 cut(s) 977, 1902
Bso31I GGTCTC 1 cut(s) 1918
Bsp119I TTCGAA 2 cut(s) 845, 914
Bsp1286I GDGCHC 2 cut(s) 578, 1473
Bsp13I TCCGGA 1 cut(s) 1267
Bsp143I GATC 9 cut(s) 462, 550, 598, 673, 960, 984, 1264, 1600, 1912
BspACI CCGC 3 cut(s) 862, 1435, 1751
BspCNI CTCAG 6 cut(s) 23, 247, 742, 1116, 1519, 1914
BspEI TCCGGA 1 cut(s) 1267
BspLI GGNNCC 3 cut(s) 1433, 1650, 1914
BspMAI CTGCAG 1 cut(s) 1496
BspPI GGATC 6 cut(s) 593, 955, 1259, 1608, 1907, 1920
BspT104I TTCGAA 2 cut(s) 845, 914
BspT107I GGYRCC 1 cut(s) 1431
BspTNI GGTCTC 1 cut(s) 1918
BsrDI GCAATG 2 cut(s) 795, 1857
BsrFI RCCGGY 1 cut(s) 742
BsrI ACTGG 7 cut(s) 45, 245, 286, 571, 909, 1433, 1836
BssAI RCCGGY 1 cut(s) 742
BssECI CCNNGG 3 cut(s) 775, 967, 1452
BssMI GATC 9 cut(s) 462, 550, 598, 673, 960, 984, 1264, 1600, 1912
BssT1I CCWWGG 2 cut(s) 775, 1452
Bst2UI CCWGG 1 cut(s) 968
Bst4CI ACNGT 6 cut(s) 768, 999, 1183, 1681, 1838, 1966
Bst6I CTCTTC 1 cut(s) 824
BstBI TTCGAA 2 cut(s) 845, 914
BstC8I GCNNGC 1 cut(s) 1399
BstDEI CTNAG 8 cut(s) 10, 101, 255, 750, 1103, 1253, 1527, 1922
BstF5I GGATG 4 cut(s) 626, 1696, 1861, 1945
BstHHI GCGC 1 cut(s) 313
BstKTI GATC 9 cut(s) 465, 553, 601, 676, 963, 987, 1267, 1603, 1915
BstMAI GTCTC 1 cut(s) 1918
BstMBI GATC 9 cut(s) 462, 550, 598, 673, 960, 984, 1264, 1600, 1912
BstMCI CGRYCG 1 cut(s) 1165
BstMWI GCNNNNNNNGC 7 cut(s) 111, 172, 719, 1296, 1429, 1565, 1790
BstNI CCWGG 1 cut(s) 968
BstNSI RCATGY 2 cut(s) 522, 1029
BstSCI CCNGG 1 cut(s) 966
BstSFI CTRYAG 2 cut(s) 1492, 1732
BstSLI GKGCMC 1 cut(s) 578
BstV1I GCAGC 3 cut(s) 1363, 1506, 1509
BstV2I GAAGAC 1 cut(s) 1494
BstX2I RGATCY 2 cut(s) 673, 1912
BstYI RGATCY 2 cut(s) 673, 1912
BtgZI GCGATG 1 cut(s) 1902
BtsCI GGATG 4 cut(s) 626, 1696, 1861, 1945
BtsI GCAGTG 2 cut(s) 170, 1617
BtsIMutI CAGTG 8 cut(s) 170, 498, 578, 594, 995, 1617, 1677, 1843
Cac8I GCNNGC 1 cut(s) 1399
CfoI GCGC 1 cut(s) 313
Cfr10I RCCGGY 1 cut(s) 742
Cfr13I GGNCC 1 cut(s) 560
Csp6I GTAC 3 cut(s) 244, 702, 733
CviAII CATG 5 cut(s) 163, 519, 1026, 1120, 1484
CviQI GTAC 3 cut(s) 244, 702, 733
DdeI CTNAG 8 cut(s) 10, 101, 255, 750, 1103, 1253, 1527, 1922
DpnI GATC 9 cut(s) 464, 552, 600, 675, 962, 986, 1266, 1602, 1914
DpnII GATC 9 cut(s) 462, 550, 598, 673, 960, 984, 1264, 1600, 1912
Eam1104I CTCTTC 1 cut(s) 824
EarI CTCTTC 1 cut(s) 824
Eco130I CCWWGG 2 cut(s) 775, 1452
Eco24I GRGCYC 1 cut(s) 1473
Eco31I GGTCTC 1 cut(s) 1918
Eco47I GGWCC 1 cut(s) 560
EcoRI GAATTC 2 cut(s) 904, 1359
EcoRII CCWGG 1 cut(s) 966
EcoT14I CCWWGG 2 cut(s) 775, 1452
EcoT38I GRGCYC 1 cut(s) 1473
ErhI CCWWGG 2 cut(s) 775, 1452
FaeI CATG 5 cut(s) 166, 522, 1029, 1123, 1487
FatI CATG 5 cut(s) 162, 518, 1025, 1119, 1483
FauNDI CATATG 1 cut(s) 1795
FbaI TGATCA 1 cut(s) 984
FblI GTMKAC 1 cut(s) 455
Fnu4HI GCNGC 3 cut(s) 1352, 1495, 1498
FokI GGATG 4 cut(s) 633, 1703, 1868, 1952
FriOI GRGCYC 1 cut(s) 1473
Fsp4HI GCNGC 3 cut(s) 1352, 1495, 1498
FspBI CTAG 6 cut(s) 386, 776, 1319, 1331, 1394, 1541
GlaI GCGC 1 cut(s) 312
GluI GCNGC 3 cut(s) 1352, 1495, 1498
GsuI CTGGAG 1 cut(s) 950
HapII CCGG 2 cut(s) 743, 1268
HhaI GCGC 1 cut(s) 313
Hin1II CATG 5 cut(s) 166, 522, 1029, 1123, 1487
Hin6I GCGC 1 cut(s) 311
HinP1I GCGC 1 cut(s) 311
HindIII AAGCTT 2 cut(s) 1399, 1586
HinfI GANTC 7 cut(s) 8, 97, 221, 525, 898, 1146, 1415
HpaII CCGG 2 cut(s) 743, 1268
HphI GGTGA 2 cut(s) 791, 1078
Hpy166II GTNNAC 4 cut(s) 246, 456, 1073, 1696
Hpy188I TCNGA 7 cut(s) 181, 477, 603, 903, 1106, 1207, 1215
Hpy8I GTNNAC 4 cut(s) 246, 456, 1073, 1696
HpyAV CCTTC 5 cut(s) 150, 551, 1085, 1930, 1952
HpyCH4III ACNGT 6 cut(s) 768, 999, 1183, 1681, 1838, 1966
HpyCH4IV ACGT 2 cut(s) 303, 1533
HpyF10VI GCNNNNNNNGC 7 cut(s) 111, 172, 719, 1296, 1429, 1565, 1790
HpyF3I CTNAG 8 cut(s) 10, 101, 255, 750, 1103, 1253, 1527, 1922
HpySE526I ACGT 2 cut(s) 303, 1533
Hsp92II CATG 5 cut(s) 166, 522, 1029, 1123, 1487
HspAI GCGC 1 cut(s) 311
Kpn2I TCCGGA 1 cut(s) 1267
Ksp22I TGATCA 1 cut(s) 984
Kzo9I GATC 9 cut(s) 462, 550, 598, 673, 960, 984, 1264, 1600, 1912
LmnI GCTCC 4 cut(s) 130, 926, 1123, 1654
Lsp1109I GCAGC 3 cut(s) 1363, 1506, 1509
LweI GCATC 4 cut(s) 447, 611, 668, 1941
MaeI CTAG 6 cut(s) 386, 776, 1319, 1331, 1394, 1541
MaeII ACGT 2 cut(s) 303, 1533
MaeIII GTNAC 7 cut(s) 304, 428, 584, 745, 791, 1514, 1942
MalI GATC 9 cut(s) 464, 552, 600, 675, 962, 986, 1266, 1602, 1914
MboI GATC 9 cut(s) 462, 550, 598, 673, 960, 984, 1264, 1600, 1912
MboII GAAGA 8 cut(s) 271, 677, 838, 841, 928, 1499, 1529, 1879
MfeI CAATTG 1 cut(s) 1293
MflI RGATCY 2 cut(s) 673, 1912
MhlI GDGCHC 2 cut(s) 578, 1473
MlyI GAGTC 3 cut(s) 2, 91, 1424
MmeI TCCRAC 2 cut(s) 477, 803
MroI TCCGGA 1 cut(s) 1267
MseI TTAA 4 cut(s) 63, 1098, 1238, 1683
MslI CAYNNNNRTG 4 cut(s) 491, 1118, 1897, 1949
MspI CCGG 2 cut(s) 743, 1268
MspR9I CCNGG 1 cut(s) 968
MunI CAATTG 1 cut(s) 1293
Mva1269I GAATGC 2 cut(s) 977, 1902
MvaI CCWGG 1 cut(s) 968
MwoI GCNNNNNNNGC 7 cut(s) 111, 172, 719, 1296, 1429, 1565, 1790
NdeI CATATG 1 cut(s) 1795
NdeII GATC 9 cut(s) 462, 550, 598, 673, 960, 984, 1264, 1600, 1912
NlaIII CATG 5 cut(s) 166, 522, 1029, 1123, 1487
NlaIV GGNNCC 3 cut(s) 1433, 1650, 1914
NmuCI GTSAC 3 cut(s) 791, 1514, 1942
NspI RCATGY 2 cut(s) 522, 1029
NspV TTCGAA 2 cut(s) 845, 914
OliI CACNNNNGTG 1 cut(s) 491
PciI ACATGT 1 cut(s) 1025
PctI GAATGC 2 cut(s) 977, 1902
PfeI GAWTC 4 cut(s) 221, 525, 898, 1146
PflMI CCANNNNNTGG 2 cut(s) 51, 973
PkrI GCNGC 3 cut(s) 1353, 1496, 1499
PleI GAGTC 3 cut(s) 2, 91, 1423
PpsI GAGTC 3 cut(s) 2, 91, 1423
PscI ACATGT 1 cut(s) 1025
Psp1406I AACGTT 1 cut(s) 1533
Psp6I CCWGG 1 cut(s) 966
PspGI CCWGG 1 cut(s) 966
PspN4I GGNNCC 3 cut(s) 1433, 1650, 1914
PspPI GGNCC 1 cut(s) 560
PstI CTGCAG 1 cut(s) 1496
PsuI RGATCY 2 cut(s) 673, 1912
RsaI GTAC 3 cut(s) 245, 703, 734
RsaNI GTAC 3 cut(s) 244, 702, 733
RseI CAYNNNNRTG 4 cut(s) 491, 1118, 1897, 1949
SaqAI TTAA 4 cut(s) 63, 1098, 1238, 1683
SatI GCNGC 3 cut(s) 1352, 1495, 1498
Sau3AI GATC 9 cut(s) 462, 550, 598, 673, 960, 984, 1264, 1600, 1912
Sau96I GGNCC 1 cut(s) 560
ScaI AGTACT 1 cut(s) 734
SchI GAGTC 3 cut(s) 2, 91, 1424
ScrFI CCNGG 1 cut(s) 968
SduI GDGCHC 2 cut(s) 578, 1473
SfaNI GCATC 4 cut(s) 447, 611, 668, 1941
SfcI CTRYAG 2 cut(s) 1492, 1732
SfuI TTCGAA 2 cut(s) 845, 914
SinI GGWCC 1 cut(s) 560
SmiMI CAYNNNNRTG 4 cut(s) 491, 1118, 1897, 1949
SmlI CTYRAG 1 cut(s) 433
SmoI CTYRAG 1 cut(s) 433
SsiI CCGC 3 cut(s) 862, 1435, 1751
SspMI CTAG 6 cut(s) 386, 776, 1319, 1331, 1394, 1541
StyD4I CCNGG 1 cut(s) 966
StyI CCWWGG 2 cut(s) 775, 1452
TaaI ACNGT 6 cut(s) 768, 999, 1183, 1681, 1838, 1966
TaiI ACGT 2 cut(s) 306, 1536
TaqI TCGA 7 cut(s) 67, 441, 845, 914, 953, 1418, 1609
TaqII GACCGA 1 cut(s) 1151
TatI WGTACW 2 cut(s) 701, 732
TfiI GAWTC 4 cut(s) 221, 525, 898, 1146
Tru1I TTAA 4 cut(s) 63, 1098, 1238, 1683
Tru9I TTAA 4 cut(s) 63, 1098, 1238, 1683
TscAI CASTG 8 cut(s) 177, 498, 578, 601, 1002, 1624, 1684, 1843
TseFI GTSAC 3 cut(s) 791, 1514, 1942
TseI GCWGC 3 cut(s) 1351, 1494, 1497
Tsp45I GTSAC 3 cut(s) 791, 1514, 1942
TspDTI ATGAA 7 cut(s) 151, 1170, 1500, 1779, 1785, 1860, 1949
TspGWI ACGGA 2 cut(s) 263, 1613
TspRI CASTG 8 cut(s) 177, 498, 578, 601, 1002, 1624, 1684, 1843
Van91I CCANNNNNTGG 2 cut(s) 51, 973
VpaK11BI GGWCC 1 cut(s) 560
XapI RAATTY 5 cut(s) 16, 37, 904, 1359, 1707
XbaI TCTAGA 2 cut(s) 385, 1540
XceI RCATGY 2 cut(s) 522, 1029
XcmI CCANNNNNNNNNTGG 1 cut(s) 578
XmaJI CCTAGG 1 cut(s) 775
XmiI GTMKAC 1 cut(s) 455
XspI CTAG 6 cut(s) 386, 776, 1319, 1331, 1394, 1541
ZrmI AGTACT 1 cut(s) 734
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.