RchiOBHm_Chr6g0256151

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000135
Physical Location & Seq
Reverse (-)
11481941 .. 11484613
2673 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ22976

Sequence Viewer

Length: 1593 bp
ATGGAGAGCAAACCCGGCCGGCCAATCTCACAAGGTCCAAACAATGGAAGAGCTAGCCATCACTTTTTGCTTGAGATTCTAGTTACTTCTGGCTCCAGCATAATAGCAATATACTCTCTTTCAATTTTATCCATGGAAACCCAAACTCATCAGCAGCTTCACATTTTCTTCCTTCCATTTATGGGCCAAGGCCACACTGTACCCCTCATAGACATAGCAAAACTATTTGCTTCACGTGGTGAAAAATCAACCATAATAACCACCCCAGCCAATGCACCACTCTTCACCAAAGCAATCCAAACAAGTAGAAGTTCGGGTTTAGAAATTGAACTTCTTCTCATCAAATTCCCATCTACTGAAGTTGGGTTGCCTGAAGGGATTGAAAGTACTAACTGGGGTAGTAAAACCGCAGAGATGGCAGAAAAGTTCTTCAAAGCTCTAACACTGCTTGAACAACAGGTAGAGCAGCTTTTAGACCAATATCATCCTCAGTGTCTTGTTGCAAGCTCTTTGTTTCATTGGGCTACGGATGTTGCTGCAAAGTTTGGGATTCCAAGGCTCATCTTTCAAGGACCTGGTTTTTTCTCCTTGTGTGCTGCAATGAGTGTGACGCGGTACCAACCTCACATGAAGGTTGCATCTGATTCAGAATCTTTTGTTCTTCCTAATCTCCCACATGAGATCAAGATGACGAGAAACAAACTACCATATTTTGTTAAACAAAATGGTGAGACAGAGCTCATGAAGTTGCTCAGAGAATGTAATGAGACTGAAAAAAGGAGCTATGGGATTGTCATTAATAGCTTCTATGAACTTGAACCAGATTATGCGGATCACTATAGAAAAGCGTTTGGGAGGAAGTCATGGCATATCGGCCCAGTTTCATTATGCAACAAGGCAGAAAAAGATATATCAGCTAGGGGAAGAGAAGGCTCAGTTGATGATGTACAGGAATGCTTGCAATGGCTCAATTCCAAGAAACCCCGTTCGGTTGTTTATGTATGCTTTGGCAGCCTAAACAGTTTCAGTGACTGTCAGCTCTTAGAAATTGCCTTGGGTCTTGAGGCTTCACAACAGCAATTCATTTGGGTTGTCAAGAAGGAAAATAATGATAAAGAAGAGTGGTTGCCTGAAGGATGTGAGCAGAGAATGGAGGGAAGGGGACTTATTGTAAGAGGCTGGGCTCCCCAACTACTGATTCTTCAACATGAAGCAGTTGGGGCGTTTCTTACTCATTGTGGGTGGAACTCAATCCTTGAAGGAGTGACTGCCGGGGTGCTAATGATCACCTGGCCGGTGTTTGCAGATCAGTTTTACAATGAGAAGTTGGTAACTCAAATACTTGGGATTGCGGTTGCTGTGGGTTCTCAAAAGTCAGAGGATGGTGGTGTAAAAAGTGAAGCCAGGGCCAGTGTGAAGAGGGAGGCTATAAAGATGGCTATAACTGAAATCATGGAGGGTTATGAAGCTGATGGAATGAGACGAAAAGCTTTTGCGCTTGGAGAGACGGCAAGGAGGGCAGTTGAGGAAGGTGGTTCATCGTTTTCTGATTTAACTGCTCTAATTGAAGAGTTGAGGTCCCTTGGGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

530

Amino Acids

59.0

Weight (kDa)

5.97

Isoelectric Point (pI)

45.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 317 - 453 1.5e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 615
AccB1I GGYRCC 1 cut(s) 615
AccB7I CCANNNNNTGG 1 cut(s) 44
AccII CGCG 1 cut(s) 613
AciI CCGC 4 cut(s) 408, 613, 830, 1352
AclWI GGATC 1 cut(s) 840
AcoI YGGCCR 3 cut(s) 16, 20, 1292
AcsI RAATTY 1 cut(s) 344
AcuI CTGAAG 3 cut(s) 378, 393, 1152
AcvI CACGTG 1 cut(s) 236
AdeI CACNNNGTG 1 cut(s) 239
AfaI GTAC 4 cut(s) 201, 388, 617, 948
AfiI CCNNNNNNNGG 2 cut(s) 44, 182
AjnI CCWGG 3 cut(s) 574, 1289, 1403
AjuI GAANNNNNNNTTGG 2 cut(s) 1182, 1214
Alw21I GWGCWC 1 cut(s) 741
Alw26I GTCTC 4 cut(s) 725, 761, 1474, 1499
AlwI GGATC 1 cut(s) 840
AlwNI CAGNNNCTG 1 cut(s) 1032
AoxI GGCC 7 cut(s) 16, 20, 184, 190, 874, 1292, 1407
ApeKI GCWGC 5 cut(s) 154, 466, 536, 596, 1011
ApoI RAATTY 1 cut(s) 344
AseI ATTAAT 1 cut(s) 798
Asp700I GAANNNNTTC 1 cut(s) 333
Asp718I GGTACC 1 cut(s) 615
AspLEI GCGC 1 cut(s) 1498
AspS9I GGNCC 6 cut(s) 35, 184, 572, 875, 1407, 1578
AsuC2I CCSGG 2 cut(s) 15, 1273
AsuHPI GGTGA 4 cut(s) 251, 277, 740, 1279
AsuNHI GCTAGC 1 cut(s) 53
AvaII GGWCC 3 cut(s) 35, 572, 1578
BanI GGYRCC 1 cut(s) 615
BanII GRGCYC 2 cut(s) 741, 1186
BbrPI CACGTG 1 cut(s) 236
Bbv12I GWGCWC 1 cut(s) 741
BbvI GCAGC 5 cut(s) 166, 478, 523, 583, 1023
BccI CCATC 6 cut(s) 66, 358, 409, 1376, 1429, 1466
BceAI ACGGC 1 cut(s) 1524
BciT130I CCWGG 3 cut(s) 576, 1291, 1405
BclI TGATCA 1 cut(s) 1284
BcnI CCSGG 2 cut(s) 15, 1273
BcoDI GTCTC 4 cut(s) 725, 761, 1474, 1499
BfaI CTAG 3 cut(s) 54, 80, 918
BfmI CTRYAG 1 cut(s) 838
BisI GCNGC 5 cut(s) 155, 467, 537, 597, 1012
BlsI GCNGC 5 cut(s) 156, 468, 538, 598, 1013
BmcAI AGTACT 1 cut(s) 388
Bme1390I CCNGG 5 cut(s) 15, 576, 1273, 1291, 1405
Bme18I GGWCC 3 cut(s) 35, 572, 1578
BmgT120I GGNCC 6 cut(s) 35, 184, 572, 875, 1407, 1578
BmiI GGNNCC 4 cut(s) 94, 617, 1185, 1580
BmrFI CCNGG 5 cut(s) 15, 576, 1273, 1291, 1405
BmrI ACTGGG 2 cut(s) 403, 872
BmsI GCATC 1 cut(s) 647
BmtI GCTAGC 1 cut(s) 57
BmuI ACTGGG 2 cut(s) 403, 872
BpmI CTGGAG 1 cut(s) 79
BpuEI CTTGAG 2 cut(s) 92, 1082
BpuMI CCSGG 2 cut(s) 15, 1273
BsaAI YACGTR 1 cut(s) 236
BsaJI CCNNGG 7 cut(s) 132, 187, 554, 1053, 1272, 1404, 1582
Bsc4I CCNNNNNNNGG 2 cut(s) 44, 182
Bse118I RCCGGY 2 cut(s) 18, 1294
Bse1I ACTGG 3 cut(s) 398, 878, 1410
Bse3DI GCAATG 2 cut(s) 606, 968
BseBI CCWGG 3 cut(s) 576, 1291, 1405
BseDI CCNNGG 7 cut(s) 132, 187, 554, 1053, 1272, 1404, 1582
BseGI GGATG 4 cut(s) 484, 535, 1142, 1387
BseLI CCNNNNNNNGG 2 cut(s) 44, 182
BseMI GCAATG 2 cut(s) 606, 968
BseMII CTCAG 3 cut(s) 503, 766, 948
BseNI ACTGG 3 cut(s) 398, 878, 1410
BseX3I CGGCCG 1 cut(s) 16
BseXI GCAGC 5 cut(s) 166, 478, 523, 583, 1023
BseYI CCCAGC 2 cut(s) 265, 1179
Bsh1236I CGCG 1 cut(s) 613
Bsh1285I CGRYCG 1 cut(s) 19
BshFI GGCC 7 cut(s) 18, 22, 186, 192, 876, 1294, 1409
BshNI GGYRCC 1 cut(s) 615
BsiEI CGRYCG 1 cut(s) 19
BsiHKAI GWGCWC 1 cut(s) 741
BsiSI CCGG 4 cut(s) 15, 19, 1272, 1295
BslFI GGGAC 2 cut(s) 1176, 1564
BslI CCNNNNNNNGG 2 cut(s) 44, 182
BsmAI GTCTC 4 cut(s) 725, 761, 1474, 1499
BsmBI CGTCTC 2 cut(s) 1474, 1499
BsmFI GGGAC 2 cut(s) 1176, 1564
BsmI GAATGC 1 cut(s) 959
BsnI GGCC 7 cut(s) 18, 22, 186, 192, 876, 1294, 1409
Bsp1286I GDGCHC 2 cut(s) 741, 1186
Bsp1407I TGTACA 1 cut(s) 946
Bsp143I GATC 4 cut(s) 681, 832, 1284, 1306
Bsp19I CCATGG 1 cut(s) 132
BspACI CCGC 4 cut(s) 408, 613, 830, 1352
BspANI GGCC 7 cut(s) 18, 22, 186, 192, 876, 1294, 1409
BspCNI CTCAG 3 cut(s) 502, 765, 947
BspFNI CGCG 1 cut(s) 613
BspHI TCATGA 1 cut(s) 741
BspLI GGNNCC 4 cut(s) 94, 617, 1185, 1580
BspOI GCTAGC 1 cut(s) 57
BspPI GGATC 1 cut(s) 840
BspQI GCTCTTC 1 cut(s) 43
BspT107I GGYRCC 1 cut(s) 615
BsrDI GCAATG 2 cut(s) 606, 968
BsrFI RCCGGY 2 cut(s) 18, 1294
BsrGI TGTACA 1 cut(s) 946
BsrI ACTGG 3 cut(s) 398, 878, 1410
BssAI RCCGGY 2 cut(s) 18, 1294
BssECI CCNNGG 7 cut(s) 132, 187, 554, 1053, 1272, 1404, 1582
BssMI GATC 4 cut(s) 681, 832, 1284, 1306
BssT1I CCWWGG 5 cut(s) 132, 187, 554, 1053, 1582
Bst2UI CCWGG 3 cut(s) 576, 1291, 1405
Bst4CI ACNGT 3 cut(s) 199, 1022, 1034
Bst6I CTCTTC 6 cut(s) 43, 287, 919, 1113, 1412, 1563
BstAUI TGTACA 1 cut(s) 946
BstBAI YACGTR 1 cut(s) 236
BstC8I GCNNGC 4 cut(s) 20, 55, 505, 959
BstDEI CTNAG 4 cut(s) 489, 752, 934, 1042
BstDSI CCRYGG 1 cut(s) 132
BstF5I GGATG 4 cut(s) 484, 535, 1142, 1387
BstFNI CGCG 1 cut(s) 613
BstHHI GCGC 1 cut(s) 1498
BstKTI GATC 4 cut(s) 684, 835, 1287, 1309
BstMAI GTCTC 4 cut(s) 725, 761, 1474, 1499
BstMBI GATC 4 cut(s) 681, 832, 1284, 1306
BstMCI CGRYCG 1 cut(s) 19
BstMWI GCNNNNNNNGC 5 cut(s) 15, 416, 1011, 1220, 1517
BstNI CCWGG 3 cut(s) 576, 1291, 1405
BstSCI CCNGG 5 cut(s) 13, 574, 1271, 1289, 1403
BstSFI CTRYAG 1 cut(s) 838
BstUI CGCG 1 cut(s) 613
BstV1I GCAGC 5 cut(s) 166, 478, 523, 583, 1023
BstZI CGGCCG 1 cut(s) 16
BsuRI GGCC 7 cut(s) 18, 22, 186, 192, 876, 1294, 1409
BtgI CCRYGG 1 cut(s) 132
BtsCI GGATG 4 cut(s) 484, 535, 1142, 1387
BtsI GCAGTG 1 cut(s) 443
BtsIMutI CAGTG 5 cut(s) 195, 443, 497, 1033, 1417
Cac8I GCNNGC 4 cut(s) 20, 55, 505, 959
CaiI CAGNNNCTG 1 cut(s) 1032
CciI TCATGA 1 cut(s) 741
CfoI GCGC 1 cut(s) 1498
Cfr10I RCCGGY 2 cut(s) 18, 1294
Cfr13I GGNCC 6 cut(s) 35, 184, 572, 875, 1407, 1578
CseI GACGC 1 cut(s) 619
CsiI ACCWGGT 1 cut(s) 574
Csp6I GTAC 4 cut(s) 200, 387, 616, 947
CviAII CATG 7 cut(s) 133, 628, 677, 742, 864, 1208, 1453
CviQI GTAC 4 cut(s) 200, 387, 616, 947
DdeI CTNAG 4 cut(s) 489, 752, 934, 1042
DpnI GATC 4 cut(s) 683, 834, 1286, 1308
DpnII GATC 4 cut(s) 681, 832, 1284, 1306
DraIII CACNNNGTG 1 cut(s) 239
EaeI YGGCCR 3 cut(s) 16, 20, 1292
EagI CGGCCG 1 cut(s) 16
Eam1104I CTCTTC 6 cut(s) 43, 287, 919, 1113, 1412, 1563
EarI CTCTTC 6 cut(s) 43, 287, 919, 1113, 1412, 1563
Ecl136II GAGCTC 1 cut(s) 739
EclXI CGGCCG 1 cut(s) 16
Eco130I CCWWGG 5 cut(s) 132, 187, 554, 1053, 1582
Eco24I GRGCYC 2 cut(s) 741, 1186
Eco47I GGWCC 3 cut(s) 35, 572, 1578
Eco52I CGGCCG 1 cut(s) 16
Eco53kI GAGCTC 1 cut(s) 739
Eco57I CTGAAG 3 cut(s) 378, 393, 1152
Eco72I CACGTG 1 cut(s) 236
EcoICRI GAGCTC 1 cut(s) 739
EcoO109I RGGNCCY 2 cut(s) 572, 1578
EcoRII CCWGG 3 cut(s) 574, 1289, 1403
EcoT14I CCWWGG 5 cut(s) 132, 187, 554, 1053, 1582
EcoT38I GRGCYC 2 cut(s) 741, 1186
ErhI CCWWGG 5 cut(s) 132, 187, 554, 1053, 1582
Esp3I CGTCTC 2 cut(s) 1474, 1499
FaeI CATG 7 cut(s) 136, 631, 680, 745, 867, 1211, 1456
FaqI GGGAC 2 cut(s) 1176, 1564
FatI CATG 7 cut(s) 132, 627, 676, 741, 863, 1207, 1452
FbaI TGATCA 1 cut(s) 1284
Fnu4HI GCNGC 5 cut(s) 155, 467, 537, 597, 1012
FokI GGATG 4 cut(s) 471, 542, 1149, 1394
FriOI GRGCYC 2 cut(s) 741, 1186
FseI GGCCGGCC 1 cut(s) 22
Fsp4HI GCNGC 5 cut(s) 155, 467, 537, 597, 1012
FspBI CTAG 3 cut(s) 54, 80, 918
GlaI GCGC 1 cut(s) 1497
GluI GCNGC 5 cut(s) 155, 467, 537, 597, 1012
GsaI CCCAGC 2 cut(s) 269, 1183
GsuI CTGGAG 1 cut(s) 79
HaeIII GGCC 7 cut(s) 18, 22, 186, 192, 876, 1294, 1409
HapII CCGG 4 cut(s) 15, 19, 1272, 1295
HgaI GACGC 1 cut(s) 619
HhaI GCGC 1 cut(s) 1498
Hin1II CATG 7 cut(s) 136, 631, 680, 745, 867, 1211, 1456
Hin6I GCGC 1 cut(s) 1496
HinP1I GCGC 1 cut(s) 1496
HindIII AAGCTT 1 cut(s) 1488
HinfI GANTC 5 cut(s) 76, 550, 644, 650, 1198
HpaII CCGG 4 cut(s) 15, 19, 1272, 1295
HphI GGTGA 4 cut(s) 251, 277, 740, 1279
Hpy188I TCNGA 5 cut(s) 643, 649, 755, 1378, 1549
Hpy188III TCNNGA 5 cut(s) 685, 742, 1061, 1096, 1590
HpyAV CCTTC 9 cut(s) 182, 368, 625, 923, 1093, 1127, 1152, 1253, 1523
HpyCH4III ACNGT 3 cut(s) 199, 1022, 1034
HpyCH4IV ACGT 1 cut(s) 235
HpyCH4V TGCA 8 cut(s) 275, 503, 539, 599, 638, 891, 961, 1304
HpyF10VI GCNNNNNNNGC 5 cut(s) 15, 416, 1011, 1220, 1517
HpyF3I CTNAG 4 cut(s) 489, 752, 934, 1042
HpySE526I ACGT 1 cut(s) 235
Hsp92II CATG 7 cut(s) 136, 631, 680, 745, 867, 1211, 1456
HspAI GCGC 1 cut(s) 1496
KpnI GGTACC 1 cut(s) 619
KroI GCCGGC 1 cut(s) 18
KroNI GCCGGC 1 cut(s) 20
Ksp22I TGATCA 1 cut(s) 1284
Kzo9I GATC 4 cut(s) 681, 832, 1284, 1306
LguI GCTCTTC 1 cut(s) 43
LmnI GCTCC 3 cut(s) 98, 780, 1189
Lsp1109I GCAGC 5 cut(s) 166, 478, 523, 583, 1023
LweI GCATC 1 cut(s) 647
MabI ACCWGGT 1 cut(s) 574
MaeI CTAG 3 cut(s) 54, 80, 918
MaeII ACGT 1 cut(s) 235
MaeIII GTNAC 5 cut(s) 82, 607, 1028, 1264, 1330
MalI GATC 4 cut(s) 683, 834, 1286, 1308
MboI GATC 4 cut(s) 681, 832, 1284, 1306
MhlI GDGCHC 2 cut(s) 741, 1186
MluCI AATT 7 cut(s) 123, 324, 344, 970, 1047, 1079, 1563
MroNI GCCGGC 1 cut(s) 18
MroXI GAANNNNTTC 1 cut(s) 333
MseI TTAA 3 cut(s) 717, 798, 1553
MspI CCGG 4 cut(s) 15, 19, 1272, 1295
MspR9I CCNGG 5 cut(s) 15, 576, 1273, 1291, 1405
Mva1269I GAATGC 1 cut(s) 959
MvaI CCWGG 3 cut(s) 576, 1291, 1405
MvnI CGCG 1 cut(s) 613
MwoI GCNNNNNNNGC 5 cut(s) 15, 416, 1011, 1220, 1517
NaeI GCCGGC 1 cut(s) 20
NciI CCSGG 2 cut(s) 15, 1273
NcoI CCATGG 1 cut(s) 132
NdeII GATC 4 cut(s) 681, 832, 1284, 1306
NgoMIV GCCGGC 1 cut(s) 18
NheI GCTAGC 1 cut(s) 53
NlaIII CATG 7 cut(s) 136, 631, 680, 745, 867, 1211, 1456
NlaIV GGNNCC 4 cut(s) 94, 617, 1185, 1580
NmuCI GTSAC 3 cut(s) 607, 1028, 1264
PagI TCATGA 1 cut(s) 741
PciSI GCTCTTC 1 cut(s) 43
PctI GAATGC 1 cut(s) 959
PdiI GCCGGC 1 cut(s) 20
PdmI GAANNNNTTC 1 cut(s) 333
PfeI GAWTC 5 cut(s) 76, 550, 644, 650, 1198
PflMI CCANNNNNTGG 1 cut(s) 44
PkrI GCNGC 5 cut(s) 156, 468, 538, 598, 1013
PmaCI CACGTG 1 cut(s) 236
PmlI CACGTG 1 cut(s) 236
Ppu21I YACGTR 1 cut(s) 236
PpuMI RGGWCCY 2 cut(s) 572, 1578
PshBI ATTAAT 1 cut(s) 798
Psp124BI GAGCTC 1 cut(s) 741
Psp5II RGGWCCY 2 cut(s) 572, 1578
Psp6I CCWGG 3 cut(s) 574, 1289, 1403
PspCI CACGTG 1 cut(s) 236
PspFI CCCAGC 2 cut(s) 265, 1179
PspGI CCWGG 3 cut(s) 574, 1289, 1403
PspN4I GGNNCC 4 cut(s) 94, 617, 1185, 1580
PspPI GGNCC 6 cut(s) 35, 184, 572, 875, 1407, 1578
PspPPI RGGWCCY 2 cut(s) 572, 1578
PstNI CAGNNNCTG 1 cut(s) 1032
RigI GGCCGGCC 1 cut(s) 22
RsaI GTAC 4 cut(s) 201, 388, 617, 948
RsaNI GTAC 4 cut(s) 200, 387, 616, 947
SacI GAGCTC 1 cut(s) 741
SapI GCTCTTC 1 cut(s) 43
SaqAI TTAA 3 cut(s) 717, 798, 1553
SatI GCNGC 5 cut(s) 155, 467, 537, 597, 1012
Sau3AI GATC 4 cut(s) 681, 832, 1284, 1306
Sau96I GGNCC 6 cut(s) 35, 184, 572, 875, 1407, 1578
ScaI AGTACT 1 cut(s) 388
ScrFI CCNGG 5 cut(s) 15, 576, 1273, 1291, 1405
SduI GDGCHC 2 cut(s) 741, 1186
SexAI ACCWGGT 1 cut(s) 574
SfaNI GCATC 1 cut(s) 647
SfcI CTRYAG 1 cut(s) 838
SinI GGWCC 3 cut(s) 35, 572, 1578
SmlI CTYRAG 2 cut(s) 71, 1061
SmoI CTYRAG 2 cut(s) 71, 1061
Sse9I AATT 7 cut(s) 123, 324, 344, 970, 1047, 1079, 1563
SsiI CCGC 4 cut(s) 408, 613, 830, 1352
SspMI CTAG 3 cut(s) 54, 80, 918
SstI GAGCTC 1 cut(s) 741
StyD4I CCNGG 5 cut(s) 13, 574, 1271, 1289, 1403
StyI CCWWGG 5 cut(s) 132, 187, 554, 1053, 1582
TaaI ACNGT 3 cut(s) 199, 1022, 1034
TaiI ACGT 1 cut(s) 238
TasI AATT 7 cut(s) 123, 324, 344, 970, 1047, 1079, 1563
TatI WGTACW 2 cut(s) 386, 946
TfiI GAWTC 5 cut(s) 76, 550, 644, 650, 1198
Tru1I TTAA 3 cut(s) 717, 798, 1553
Tru9I TTAA 3 cut(s) 717, 798, 1553
TscAI CASTG 5 cut(s) 202, 450, 497, 1033, 1417
TseFI GTSAC 3 cut(s) 607, 1028, 1264
TseI GCWGC 5 cut(s) 154, 466, 536, 596, 1011
Tsp45I GTSAC 3 cut(s) 607, 1028, 1264
TspDTI ATGAA 9 cut(s) 506, 644, 758, 825, 873, 1072, 1224, 1479, 1527
TspGWI ACGGA 1 cut(s) 542
TspRI CASTG 5 cut(s) 202, 450, 497, 1033, 1417
Van91I CCANNNNNTGG 1 cut(s) 44
VpaK11BI GGWCC 3 cut(s) 35, 572, 1578
VspI ATTAAT 1 cut(s) 798
XapI RAATTY 1 cut(s) 344
XmnI GAANNNNTTC 1 cut(s) 333
XspI CTAG 3 cut(s) 54, 80, 918
ZrmI AGTACT 1 cut(s) 388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.