RLG00000015130

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
62122279 .. 62122960
682 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015130

Sequence Viewer

Length: 504 bp
ATGGCTCAAGGCCACATTATACCCCTCACACATATAGCCAAATTATTTTCTTCTCGTGGTAAAATTGAACTTATTCTGATCAAGTTCCCATCTGCTGAAGTTGGGTTGCCTAAGGAATGCGAGAGGGCTGATTTGATCACAACACCAGAGACGGAAGGAGAATTCTTCACAGCCACGCATATTGCTGCCAAATTTGGAATTCCAAGGCTATATTTTCATGCAACCGGATTGTTCCCTTTGCGTGCTGCATTTAGTCTGATGATACATCAACCTCAGAAGAAATTGTTATCTGAAACAGAACCCATTGTTAATCCTGGTCTCCCAGATGTGATCGAGATGACTGCGGATTTTTTCAAGCTAGATGATGAAGCAGAACTTAGCAGGTTCTGGAAAGCAGCCTTAGAGTGTGAGAAAAGGAGCTATGGGGTCATTGTTAACAGCTTCTATGAACTTGAACCAGATTATGCTGATCATTACAGGAAGGGGTATGGGAGGAAGACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

168

Amino Acids

18.95

Weight (kDa)

6.08

Isoelectric Point (pI)

46.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 372
AciI CCGC 1 cut(s) 344
AcsI RAATTY 3 cut(s) 161, 191, 198
AcuI CTGAAG 1 cut(s) 117
AgsI TTSAA 3 cut(s) 68, 355, 455
AjiI CACGTC 1 cut(s) 501
AjnI CCWGG 1 cut(s) 313
AluBI AGCT 3 cut(s) 358, 420, 441
AluI AGCT 3 cut(s) 358, 420, 441
Alw26I GTCTC 2 cut(s) 143, 323
AlwNI CAGNNNCTG 1 cut(s) 387
AoxI GGCC 1 cut(s) 10
ApeKI GCWGC 3 cut(s) 185, 245, 395
ApoI RAATTY 3 cut(s) 161, 191, 198
Asp700I GAANNNNTTC 1 cut(s) 72
AxyI CCTNAGG 1 cut(s) 111
BauI CACGAG 1 cut(s) 54
BbvI GCAGC 3 cut(s) 172, 232, 407
BccI CCATC 1 cut(s) 97
BcgI CGANNNNNNTGC 2 cut(s) 323, 357
BciT130I CCWGG 1 cut(s) 315
BclI TGATCA 3 cut(s) 78, 135, 469
BcoDI GTCTC 2 cut(s) 143, 323
BfaI CTAG 1 cut(s) 359
BfuAI ACCTGC 1 cut(s) 372
BisI GCNGC 3 cut(s) 186, 246, 396
BlsI GCNGC 3 cut(s) 187, 247, 397
Bme1390I CCNGG 1 cut(s) 315
BmgBI CACGTC 1 cut(s) 501
BmrFI CCNGG 1 cut(s) 315
BsaI GGTCTC 1 cut(s) 323
BsaJI CCNNGG 1 cut(s) 203
BsaWI WCCGGW 1 cut(s) 224
Bse21I CCTNAGG 1 cut(s) 111
BseBI CCWGG 1 cut(s) 315
BseDI CCNNGG 1 cut(s) 203
BseMII CTCAG 1 cut(s) 287
BseXI GCAGC 3 cut(s) 172, 232, 407
BshFI GGCC 1 cut(s) 12
BsiSI CCGG 1 cut(s) 225
BsmAI GTCTC 2 cut(s) 143, 323
BsmBI CGTCTC 1 cut(s) 143
BsmI GAATGC 1 cut(s) 122
BsnI GGCC 1 cut(s) 12
Bso31I GGTCTC 1 cut(s) 323
Bsp143I GATC 4 cut(s) 78, 135, 330, 469
BspACI CCGC 1 cut(s) 344
BspANI GGCC 1 cut(s) 12
BspCNI CTCAG 1 cut(s) 286
BspMI ACCTGC 1 cut(s) 372
BspTNI GGTCTC 1 cut(s) 323
BssECI CCNNGG 1 cut(s) 203
BssMI GATC 4 cut(s) 78, 135, 330, 469
BssSI CACGAG 1 cut(s) 54
BssT1I CCWWGG 1 cut(s) 203
Bst2BI CACGAG 1 cut(s) 54
Bst2UI CCWGG 1 cut(s) 315
BstC8I GCNNGC 1 cut(s) 243
BstDEI CTNAG 4 cut(s) 111, 273, 377, 400
BstKTI GATC 4 cut(s) 81, 138, 333, 472
BstMAI GTCTC 2 cut(s) 143, 323
BstMBI GATC 4 cut(s) 78, 135, 330, 469
BstNI CCWGG 1 cut(s) 315
BstSCI CCNGG 1 cut(s) 313
BstV1I GCAGC 3 cut(s) 172, 232, 407
Bsu36I CCTNAGG 1 cut(s) 111
BsuRI GGCC 1 cut(s) 12
BtrI CACGTC 1 cut(s) 501
BveI ACCTGC 1 cut(s) 372
Cac8I GCNNGC 1 cut(s) 243
CaiI CAGNNNCTG 1 cut(s) 387
CspCI CAANNNNNGTGG 2 cut(s) 163, 198
CviAII CATG 1 cut(s) 218
DdeI CTNAG 4 cut(s) 111, 273, 377, 400
DpnI GATC 4 cut(s) 80, 137, 332, 471
DpnII GATC 4 cut(s) 78, 135, 330, 469
Eco130I CCWWGG 1 cut(s) 203
Eco31I GGTCTC 1 cut(s) 323
Eco57I CTGAAG 1 cut(s) 117
Eco81I CCTNAGG 1 cut(s) 111
EcoRI GAATTC 2 cut(s) 161, 198
EcoRII CCWGG 1 cut(s) 313
EcoT14I CCWWGG 1 cut(s) 203
ErhI CCWWGG 1 cut(s) 203
Esp3I CGTCTC 1 cut(s) 143
FaeI CATG 1 cut(s) 221
FalI AAGNNNNNCTT 2 cut(s) 360, 392
FatI CATG 1 cut(s) 217
FbaI TGATCA 3 cut(s) 78, 135, 469
Fnu4HI GCNGC 3 cut(s) 186, 246, 396
Fsp4HI GCNGC 3 cut(s) 186, 246, 396
FspBI CTAG 1 cut(s) 359
GluI GCNGC 3 cut(s) 186, 246, 396
HaeIII GGCC 1 cut(s) 12
HapII CCGG 1 cut(s) 225
Hin1II CATG 1 cut(s) 221
HincII GTYRAC 1 cut(s) 436
HindII GTYRAC 1 cut(s) 436
HpaI GTTAAC 1 cut(s) 436
HpaII CCGG 1 cut(s) 225
Hpy166II GTNNAC 1 cut(s) 436
Hpy188I TCNGA 4 cut(s) 78, 258, 276, 292
Hpy188III TCNNGA 2 cut(s) 334, 388
Hpy8I GTNNAC 1 cut(s) 436
HpyAV CCTTC 2 cut(s) 149, 475
HpyCH4IV ACGT 1 cut(s) 500
HpyCH4V TGCA 2 cut(s) 221, 248
HpyF3I CTNAG 4 cut(s) 111, 273, 377, 400
HpySE526I ACGT 1 cut(s) 500
Hsp92II CATG 1 cut(s) 221
Ksp22I TGATCA 3 cut(s) 78, 135, 469
KspAI GTTAAC 1 cut(s) 436
Kzo9I GATC 4 cut(s) 78, 135, 330, 469
LmnI GCTCC 1 cut(s) 417
LpnPI CCDG 9 cut(s) 159, 238, 300, 327, 336, 367, 373, 463, 471
Lsp1109I GCAGC 3 cut(s) 172, 232, 407
MaeI CTAG 1 cut(s) 359
MaeII ACGT 1 cut(s) 500
MalI GATC 4 cut(s) 80, 137, 332, 471
MboI GATC 4 cut(s) 78, 135, 330, 469
MboII GAAGA 3 cut(s) 42, 157, 289
MluCI AATT 6 cut(s) 41, 63, 161, 191, 198, 281
MnlI CCTC 4 cut(s) 35, 117, 282, 486
MroXI GAANNNNTTC 1 cut(s) 72
MseI TTAA 2 cut(s) 309, 435
MspI CCGG 1 cut(s) 225
MspR9I CCNGG 1 cut(s) 315
Mva1269I GAATGC 1 cut(s) 122
MvaI CCWGG 1 cut(s) 315
NdeII GATC 4 cut(s) 78, 135, 330, 469
NlaIII CATG 1 cut(s) 221
PctI GAATGC 1 cut(s) 122
PdmI GAANNNNTTC 1 cut(s) 72
PkrI GCNGC 3 cut(s) 187, 247, 397
Psp6I CCWGG 1 cut(s) 313
PspGI CCWGG 1 cut(s) 313
PstNI CAGNNNCTG 1 cut(s) 387
SaqAI TTAA 2 cut(s) 309, 435
SatI GCNGC 3 cut(s) 186, 246, 396
Sau3AI GATC 4 cut(s) 78, 135, 330, 469
ScrFI CCNGG 1 cut(s) 315
SetI ASST 6 cut(s) 274, 360, 386, 422, 443, 503
SmlI CTYRAG 1 cut(s) 6
SmoI CTYRAG 1 cut(s) 6
Sse9I AATT 6 cut(s) 41, 63, 161, 191, 198, 281
SsiI CCGC 1 cut(s) 344
SspMI CTAG 1 cut(s) 359
StyD4I CCNGG 1 cut(s) 313
StyI CCWWGG 1 cut(s) 203
TaiI ACGT 1 cut(s) 503
TaqI TCGA 1 cut(s) 333
TasI AATT 6 cut(s) 41, 63, 161, 191, 198, 281
Tru1I TTAA 2 cut(s) 309, 435
Tru9I TTAA 2 cut(s) 309, 435
TseI GCWGC 3 cut(s) 185, 245, 395
TspDTI ATGAA 3 cut(s) 206, 381, 462
TspGWI ACGGA 1 cut(s) 167
XapI RAATTY 3 cut(s) 161, 191, 198
XmnI GAANNNNTTC 1 cut(s) 72
XspI CTAG 1 cut(s) 359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.