Rorug05G0564600

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000135
Physical Location & Seq
Forward (+)
75590006 .. 75592697
2692 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0564600.1

Sequence Viewer

Length: 1593 bp
ATGAAAACACCATCTTTCTCATTGTTCAAGTTCTCCCCAGACCATTTCGCTCTTTGCTTGCAAAACTGCCTGAAAGCAAAGACTTTGAGACAAGGGAAGCAAGTCCATGCAGTGTTGTTATCATCTGGGGTTGACATGAACTTGTTATCTTTGAGTTCAAAGCTTGTGGGGATGTATGCAAGTTGTGGGGACGTGAGTTCTGCACGGCAGGTGTTCGATAAAATTCCCAAACCAAATGTGTTTTCATTGAATTGGATGATGTTTGCTTCGGCGTTTAATGGGTGGTTTGAGCAAGCAATTGGGTACTTTTGTTTGATGCGAGAGTTGGGAATTGTCGCCAATAAGTTCAGTTTTCCGGTCATGCTTAAAGTTTGTGTTGGTTTGATGGATTTGAATAAGGGAAAGGAGGTTCATGCTGTGGTGTATAAGATGGGGTTTGAAAAGGATGTTGCTTTGGGGAATGCATTGGTGGATATGTATTGCAAATGTGGAAGCTTGTGTTATGGTCATCGACTTTTTGATCGAATGTTTGAAAGAGATGTGGCTTCTTGGACATCTATGATATGTGGGTATTGTAATGTAGGAAGGACTGATCAAGCGGCAATGTTGTTTGAGAGGATAAAGTTGGATGGATTGGAACCAAATGATTTCACATGGAATGCAATGATAGCTGGGTATGCTCGGAGTGGAGATAGCAATCGAGCATATGTGCTACTATCTAGGATGACTAAAGAAGGATTGGTTCCTGATTTGGTTACATGGAATGCAATAATTTCAGGTTTTGCCCGAAGCCAGGAGGCAGGTGAAGCTTTTAAGTTGTTCAGTGCTATGTTAGTGTCTGGAATTAAGCCCAACCTTGTCACTATCACAGGATTGCTCCCAGCTTGTGGAGTGCTTGGTTCAGTTGAAAGAGGGAGAGAAATTCATGGATTGATATGTAGGATGGGATTTGACATAAATGTCTTTGTTGCTAGTGCTCTTATTGACATGTACTCGAAATGCGGCAGTGTGAAAAATGCTCGAAGTGTATTTGACTGGACTCCTGTATACAATGTTGCGTCGTGGAATGCAATGATTGGATGTTATGGTAAGCACGGTATGGTTGATTCTGCGGTAGTGCTTTTCGAAAGAATGCAAGAGGAAGGAATTCAGGCTAATGAAGTGACTTTGAGTTGTGTACTTTCTGCATGCAGCCATAGTGGTTCTGTAGAAAAGGGTTTAGAGATATTCAGGTCCATGAAAGAGAGCCATGGAGTTGAGGCAAGTAAAGAACATTATGGTTGTGTCATCGATCTCTTGTGCCGTTCAGGGAAGATGGTAGAAGCTTATGAGTTTGTGAAGTCCATTCCTATAGAAGTCACTGAATCCATTATTGGAGCTTTGCTGAACGGGTGTAAAGTCCATGGAAGAAGAGATCTTGCTAAATTGATGGCTCAGGATATTCTGAAAATGGAGTTAAAGAGACCTGGAGGTTTTGTAACACTCTCAAATATCTATGCTGCTGATGGAGAATGGGAAGAAGTTGAGTATGTAAGGAAGGTGATGAAGCAGAGGAAGGTCCTTAAGAAACCTGGATTTAGTTCACTCGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

530

Amino Acids

58.66

Weight (kDa)

8.49

Isoelectric Point (pI)

30.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 179 - 220 2.5e-09 PPR repeat family
PPR_long PF17177 198 - 304 1.8e-08 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 210 - 243 4e-07 PPR repeat
PPR_3 PF13812 211 - 260 2.1e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 214 - 253 1.3e-08 PPR repeat family
PPR PF01535 217 - 247 1.6e-06 PPR repeat
PPR_3 PF13812 238 - 297 1.1e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 246 - 277 4.5e-07 PPR repeat
PPR_2 PF13041 249 - 296 9.2e-12 PPR repeat family
PPR_2 PF13041 351 - 398 3.3e-12 PPR repeat family
PPR PF01535 354 - 383 1.6e-09 PPR repeat
PPR_long PF17177 356 - 471 2.1e-06 Pentacotripeptide-repeat region of PRORP
E_motif PF20431 472 - 528 9e-13 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 199, 791
AasI GACNNNNNNGTC 1 cut(s) 959
Acc36I ACCTGC 2 cut(s) 199, 791
AccB7I CCANNNNNTGG 1 cut(s) 887
AccI GTMKAC 1 cut(s) 1047
AciI CCGC 3 cut(s) 599, 1002, 1112
AcsI RAATTY 3 cut(s) 222, 921, 1146
AfaI GTAC 3 cut(s) 305, 992, 1179
AfiI CCNNNNNNNGG 2 cut(s) 793, 887
AflII CTTAAG 1 cut(s) 1562
AflIII ACRYGT 1 cut(s) 987
AgsI TTSAA 7 cut(s) 28, 159, 250, 394, 440, 533, 908
AjiI CACGTC 1 cut(s) 193
AjnI CCWGG 3 cut(s) 792, 1465, 1570
AjuI GAANNNNNNNTTGG 4 cut(s) 226, 258, 1356, 1388
AloI GAACNNNNNNTCC 2 cut(s) 393, 425
AluBI AGCT 7 cut(s) 163, 495, 671, 809, 884, 1325, 1379
AluI AGCT 7 cut(s) 163, 495, 671, 809, 884, 1325, 1379
Alw21I GWGCWC 1 cut(s) 979
Alw26I GTCTC 2 cut(s) 82, 1456
ApeKI GCWGC 2 cut(s) 1191, 1499
ApoI RAATTY 3 cut(s) 222, 921, 1146
Asp700I GAANNNNTTC 1 cut(s) 1146
AspS9I GGNCC 2 cut(s) 1233, 1558
AsuHPI GGTGA 2 cut(s) 815, 1552
AsuII TTCGAA 1 cut(s) 1125
AvaII GGWCC 2 cut(s) 1233, 1558
BaeI ACNNNNGTAYC 2 cut(s) 295, 328
Bbv12I GWGCWC 1 cut(s) 979
BbvI GCAGC 2 cut(s) 1203, 1486
BccI CCATC 8 cut(s) 19, 379, 424, 623, 937, 1309, 1423, 1499
BceAI ACGGC 2 cut(s) 221, 1287
BciT130I CCWGG 3 cut(s) 794, 1467, 1572
BclI TGATCA 1 cut(s) 592
BcoDI GTCTC 2 cut(s) 82, 1456
BfaI CTAG 2 cut(s) 720, 972
BfmI CTRYAG 2 cut(s) 1206, 1350
BfrI CTTAAG 1 cut(s) 1562
BfuAI ACCTGC 2 cut(s) 199, 791
BglII AGATCT 1 cut(s) 1414
BisI GCNGC 4 cut(s) 600, 1003, 1192, 1500
BlsI GCNGC 4 cut(s) 601, 1004, 1193, 1501
Bme1390I CCNGG 3 cut(s) 794, 1467, 1572
Bme18I GGWCC 2 cut(s) 1233, 1558
BmgBI CACGTC 1 cut(s) 193
BmgT120I GGNCC 2 cut(s) 1233, 1558
BmiI GGNNCC 2 cut(s) 639, 744
BmrFI CCNGG 3 cut(s) 794, 1467, 1572
BmsI GCATC 1 cut(s) 306
BpmI CTGGAG 1 cut(s) 1488
Bpu10I CCTNAGC 1 cut(s) 1434
Bpu14I TTCGAA 1 cut(s) 1125
Bsa29I ATCGAT 1 cut(s) 1290
BsaBI GATNNNNATC 1 cut(s) 696
BsaI GGTCTC 1 cut(s) 1456
BsaJI CCNNGG 2 cut(s) 1249, 1402
BsaWI WCCGGW 1 cut(s) 355
BsaXI ACNNNNNCTCC 2 cut(s) 1461, 1491
Bsc4I CCNNNNNNNGG 2 cut(s) 793, 887
Bse1I ACTGG 1 cut(s) 1040
Bse3DI GCAATG 3 cut(s) 609, 669, 1077
Bse8I GATNNNNATC 1 cut(s) 696
BseBI CCWGG 3 cut(s) 794, 1467, 1572
BseCI ATCGAT 1 cut(s) 1290
BseDI CCNNGG 2 cut(s) 1249, 1402
BseGI GGATG 7 cut(s) 177, 261, 451, 634, 729, 948, 1085
BseJI GATNNNNATC 1 cut(s) 696
BseLI CCNNNNNNNGG 2 cut(s) 793, 887
BseMI GCAATG 3 cut(s) 609, 669, 1077
BseMII CTCAG 1 cut(s) 1448
BseNI ACTGG 1 cut(s) 1040
BseXI GCAGC 2 cut(s) 1203, 1486
BseYI CCCAGC 2 cut(s) 671, 880
BsgI GTGCAG 1 cut(s) 186
BshVI ATCGAT 1 cut(s) 1290
BsiHKAI GWGCWC 1 cut(s) 979
BsiSI CCGG 1 cut(s) 356
BslFI GGGAC 1 cut(s) 203
BslI CCNNNNNNNGG 2 cut(s) 793, 887
BsmAI GTCTC 2 cut(s) 82, 1456
BsmFI GGGAC 1 cut(s) 203
BsmI GAATGC 5 cut(s) 466, 664, 769, 1072, 1137
Bso31I GGTCTC 1 cut(s) 1456
Bsp119I TTCGAA 1 cut(s) 1125
Bsp1286I GDGCHC 1 cut(s) 979
Bsp143I GATC 4 cut(s) 520, 592, 1291, 1414
Bsp19I CCATGG 2 cut(s) 1249, 1402
BspACI CCGC 3 cut(s) 599, 1002, 1112
BspCNI CTCAG 1 cut(s) 1447
BspDI ATCGAT 1 cut(s) 1290
BspLI GGNNCC 2 cut(s) 639, 744
BspMI ACCTGC 2 cut(s) 199, 791
BspT104I TTCGAA 1 cut(s) 1125
BspTI CTTAAG 1 cut(s) 1562
BspTNI GGTCTC 1 cut(s) 1456
BsrDI GCAATG 3 cut(s) 609, 669, 1077
BsrI ACTGG 1 cut(s) 1040
BssECI CCNNGG 2 cut(s) 1249, 1402
BssMI GATC 4 cut(s) 520, 592, 1291, 1414
BssNAI GTATAC 1 cut(s) 1048
BssT1I CCWWGG 2 cut(s) 1249, 1402
Bst1107I GTATAC 1 cut(s) 1048
Bst2UI CCWGG 3 cut(s) 794, 1467, 1572
Bst4CI ACNGT 1 cut(s) 1097
Bst6I CTCTTC 1 cut(s) 1405
BstAFI CTTAAG 1 cut(s) 1562
BstBI TTCGAA 1 cut(s) 1125
BstC8I GCNNGC 3 cut(s) 59, 294, 1189
BstDEI CTNAG 1 cut(s) 1434
BstDSI CCRYGG 2 cut(s) 1249, 1402
BstF5I GGATG 7 cut(s) 177, 261, 451, 634, 729, 948, 1085
BstKTI GATC 4 cut(s) 523, 595, 1294, 1417
BstMAI GTCTC 2 cut(s) 82, 1456
BstMBI GATC 4 cut(s) 520, 592, 1291, 1414
BstMWI GCNNNNNNNGC 3 cut(s) 668, 677, 806
BstNI CCWGG 3 cut(s) 794, 1467, 1572
BstNSI RCATGY 2 cut(s) 991, 1191
BstSCI CCNGG 3 cut(s) 792, 1465, 1570
BstSFI CTRYAG 2 cut(s) 1206, 1350
BstV1I GCAGC 2 cut(s) 1203, 1486
BstX2I RGATCY 1 cut(s) 1414
BstYI RGATCY 1 cut(s) 1414
BstZ17I GTATAC 1 cut(s) 1048
Bsu15I ATCGAT 1 cut(s) 1290
BsuTUI ATCGAT 1 cut(s) 1290
BtgI CCRYGG 2 cut(s) 1249, 1402
BtrI CACGTC 1 cut(s) 193
BtsCI GGATG 7 cut(s) 177, 261, 451, 634, 729, 948, 1085
BtsI GCAGTG 2 cut(s) 117, 1012
BtsIMutI CAGTG 4 cut(s) 117, 829, 1012, 1359
BveI ACCTGC 2 cut(s) 199, 791
Cac8I GCNNGC 3 cut(s) 59, 294, 1189
Cfr13I GGNCC 2 cut(s) 1233, 1558
ClaI ATCGAT 1 cut(s) 1290
CseI GACGC 1 cut(s) 1047
Csp6I GTAC 3 cut(s) 304, 991, 1178
CspCI CAANNNNNGTGG 2 cut(s) 147, 182
CviQI GTAC 3 cut(s) 304, 991, 1178
DdeI CTNAG 1 cut(s) 1434
DpnI GATC 4 cut(s) 522, 594, 1293, 1416
DpnII GATC 4 cut(s) 520, 592, 1291, 1414
DrdI GACNNNNNNGTC 1 cut(s) 959
DseDI GACNNNNNNGTC 1 cut(s) 959
Eam1104I CTCTTC 1 cut(s) 1405
EarI CTCTTC 1 cut(s) 1405
Eco130I CCWWGG 2 cut(s) 1249, 1402
Eco31I GGTCTC 1 cut(s) 1456
Eco47I GGWCC 2 cut(s) 1233, 1558
EcoO109I RGGNCCY 1 cut(s) 1558
EcoRI GAATTC 1 cut(s) 1146
EcoRII CCWGG 3 cut(s) 792, 1465, 1570
EcoT14I CCWWGG 2 cut(s) 1249, 1402
EcoT22I ATGCAT 1 cut(s) 466
ErhI CCWWGG 2 cut(s) 1249, 1402
FaqI GGGAC 1 cut(s) 203
FauNDI CATATG 1 cut(s) 706
FbaI TGATCA 1 cut(s) 592
FblI GTMKAC 1 cut(s) 1047
Fnu4HI GCNGC 4 cut(s) 600, 1003, 1192, 1500
FokI GGATG 7 cut(s) 184, 268, 458, 641, 736, 955, 1092
Fsp4HI GCNGC 4 cut(s) 600, 1003, 1192, 1500
FspBI CTAG 2 cut(s) 720, 972
GluI GCNGC 4 cut(s) 600, 1003, 1192, 1500
GsaI CCCAGC 2 cut(s) 675, 884
GsuI CTGGAG 1 cut(s) 1488
HapII CCGG 1 cut(s) 356
HgaI GACGC 1 cut(s) 1047
HincII GTYRAC 1 cut(s) 133
HindII GTYRAC 1 cut(s) 133
HindIII AAGCTT 4 cut(s) 161, 493, 807, 1323
HinfI GANTC 3 cut(s) 1039, 1106, 1364
HpaII CCGG 1 cut(s) 356
HphI GGTGA 2 cut(s) 815, 1552
Hpy166II GTNNAC 4 cut(s) 133, 1048, 1178, 1583
Hpy188I TCNGA 2 cut(s) 684, 1446
Hpy188III TCNNGA 3 cut(s) 746, 840, 1436
Hpy8I GTNNAC 4 cut(s) 133, 1048, 1178, 1583
Hpy99I CGWCG 1 cut(s) 1063
HpyAV CCTTC 5 cut(s) 579, 728, 1136, 1531, 1549
HpyCH4III ACNGT 1 cut(s) 1097
HpyCH4IV ACGT 1 cut(s) 192
HpyF10VI GCNNNNNNNGC 3 cut(s) 668, 677, 806
HpyF3I CTNAG 1 cut(s) 1434
HpySE526I ACGT 1 cut(s) 192
Ksp22I TGATCA 1 cut(s) 592
Kzo9I GATC 4 cut(s) 520, 592, 1291, 1414
LmnI GCTCC 2 cut(s) 882, 1376
Lsp1109I GCAGC 2 cut(s) 1203, 1486
LweI GCATC 1 cut(s) 306
MaeI CTAG 2 cut(s) 720, 972
MaeII ACGT 1 cut(s) 192
MaeIII GTNAC 5 cut(s) 754, 859, 1162, 1357, 1477
MalI GATC 4 cut(s) 522, 594, 1293, 1416
MboI GATC 4 cut(s) 520, 592, 1291, 1414
MboII GAAGA 4 cut(s) 1324, 1419, 1422, 1529
MfeI CAATTG 1 cut(s) 297
MflI RGATCY 1 cut(s) 1414
MhlI GDGCHC 1 cut(s) 979
MluCI AATT 9 cut(s) 222, 250, 297, 330, 771, 843, 921, 1146, 1424
MlyI GAGTC 1 cut(s) 1033
MmeI TCCRAC 1 cut(s) 606
MnlI CCTC 8 cut(s) 400, 609, 790, 905, 1132, 1252, 1463, 1545
Mph1103I ATGCAT 1 cut(s) 466
MroXI GAANNNNTTC 1 cut(s) 1146
MseI TTAA 7 cut(s) 276, 366, 813, 846, 1457, 1563, 1591
MspCI CTTAAG 1 cut(s) 1562
MspI CCGG 1 cut(s) 356
MspR9I CCNGG 3 cut(s) 794, 1467, 1572
MunI CAATTG 1 cut(s) 297
Mva1269I GAATGC 5 cut(s) 466, 664, 769, 1072, 1137
MvaI CCWGG 3 cut(s) 794, 1467, 1572
MwoI GCNNNNNNNGC 3 cut(s) 668, 677, 806
NcoI CCATGG 2 cut(s) 1249, 1402
NdeI CATATG 1 cut(s) 706
NdeII GATC 4 cut(s) 520, 592, 1291, 1414
NlaIV GGNNCC 2 cut(s) 639, 744
NmuCI GTSAC 3 cut(s) 859, 1162, 1357
NsiI ATGCAT 1 cut(s) 466
NspI RCATGY 2 cut(s) 991, 1191
NspV TTCGAA 1 cut(s) 1125
PaeI GCATGC 1 cut(s) 1191
PaqCI CACCTGC 2 cut(s) 199, 791
PciI ACATGT 1 cut(s) 987
PctI GAATGC 5 cut(s) 466, 664, 769, 1072, 1137
PdmI GAANNNNTTC 1 cut(s) 1146
PfeI GAWTC 2 cut(s) 1106, 1364
PflMI CCANNNNNTGG 1 cut(s) 887
PkrI GCNGC 4 cut(s) 601, 1004, 1193, 1501
PleI GAGTC 1 cut(s) 1033
PpsI GAGTC 1 cut(s) 1033
PpuMI RGGWCCY 1 cut(s) 1558
PscI ACATGT 1 cut(s) 987
Psp5II RGGWCCY 1 cut(s) 1558
Psp6I CCWGG 3 cut(s) 792, 1465, 1570
PspFI CCCAGC 2 cut(s) 671, 880
PspGI CCWGG 3 cut(s) 792, 1465, 1570
PspN4I GGNNCC 2 cut(s) 639, 744
PspPI GGNCC 2 cut(s) 1233, 1558
PspPPI RGGWCCY 1 cut(s) 1558
PsuI RGATCY 1 cut(s) 1414
RsaI GTAC 3 cut(s) 305, 992, 1179
RsaNI GTAC 3 cut(s) 304, 991, 1178
SaqAI TTAA 7 cut(s) 276, 366, 813, 846, 1457, 1563, 1591
SatI GCNGC 4 cut(s) 600, 1003, 1192, 1500
Sau3AI GATC 4 cut(s) 520, 592, 1291, 1414
Sau96I GGNCC 2 cut(s) 1233, 1558
SchI GAGTC 1 cut(s) 1033
ScrFI CCNGG 3 cut(s) 794, 1467, 1572
SduI GDGCHC 1 cut(s) 979
SfaNI GCATC 1 cut(s) 306
SfcI CTRYAG 2 cut(s) 1206, 1350
SfuI TTCGAA 1 cut(s) 1125
SinI GGWCC 2 cut(s) 1233, 1558
SmlI CTYRAG 1 cut(s) 1562
SmoI CTYRAG 1 cut(s) 1562
SphI GCATGC 1 cut(s) 1191
Sse9I AATT 9 cut(s) 222, 250, 297, 330, 771, 843, 921, 1146, 1424
SsiI CCGC 3 cut(s) 599, 1002, 1112
SspMI CTAG 2 cut(s) 720, 972
StyD4I CCNGG 3 cut(s) 792, 1465, 1570
StyI CCWWGG 2 cut(s) 1249, 1402
TaaI ACNGT 1 cut(s) 1097
TaiI ACGT 1 cut(s) 195
TaqI TCGA 9 cut(s) 216, 511, 523, 700, 995, 1021, 1125, 1290, 1587
TasI AATT 9 cut(s) 222, 250, 297, 330, 771, 843, 921, 1146, 1424
TatI WGTACW 2 cut(s) 990, 1177
TauI GCSGC 2 cut(s) 602, 1005
TfiI GAWTC 2 cut(s) 1106, 1364
Tru1I TTAA 7 cut(s) 276, 366, 813, 846, 1457, 1563, 1591
Tru9I TTAA 7 cut(s) 276, 366, 813, 846, 1457, 1563, 1591
TscAI CASTG 4 cut(s) 117, 829, 1012, 1366
TseFI GTSAC 3 cut(s) 859, 1162, 1357
TseI GCWGC 2 cut(s) 1191, 1499
Tsp45I GTSAC 3 cut(s) 859, 1162, 1357
TspDTI ATGAA 8 cut(s) 17, 152, 234, 401, 914, 1173, 1253, 1559
TspRI CASTG 4 cut(s) 117, 829, 1012, 1366
Van91I CCANNNNNTGG 1 cut(s) 887
Vha464I CTTAAG 1 cut(s) 1562
VpaK11BI GGWCC 2 cut(s) 1233, 1558
XapI RAATTY 3 cut(s) 222, 921, 1146
XceI RCATGY 2 cut(s) 991, 1191
XmiI GTMKAC 1 cut(s) 1047
XmnI GAANNNNTTC 1 cut(s) 1146
XspI CTAG 2 cut(s) 720, 972
Zsp2I ATGCAT 1 cut(s) 466
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.