Rroxscaffold_7G00209440

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000135
Physical Location & Seq
Forward (+)
59667707 .. 59672003
4297 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00209440.1

Sequence Viewer

Length: 2901 bp
ATGGAAACCAAAACTGAGCAGCAGCTTCACATTTTCTTCCTTCCCTTTATGGCTCAAGGCCACACTTTACCTCTTATAGACATAGCCAAACTATTTGCTTCACGTGGTGTAAAATCCACCTTAATAACCACCCTCGTCAATGCACCACTTTTCTCCAAAGCAATCCAAACTAGCAAAAGTTTGGGTTTCGAAATCGAACTTCTTGTCATCAAATTCCCATCTACTGAAGTCGGGTTGCCTGAAGGAATTGAAAGAACTAACTTGCGTAAAAAGCAAGAGCAGGCGGATAAGTACTTCAGAGCCACCAATCTGCTTGAGCAACAGGTTGAGCCAATTTTAGACCAACATCGTCCTCACTGTCTTGTTGCAGACTCTCTGTTTCCTTGGGCTACAGATGTTGCTGCCAAGTTTGGGATTCCAAGGATCATCTTTCATGGACCCGGTTTTTTCCCCTTGTGTGCTTCAACTAGTGTGATGCGGTACCAACCTCAGAGGGAGGTTTCATCTGATTCAGAATCTTTTGTTGTTCCTGGTCTCCCAGATGAGATCAAGATGACAAAAAACAAACTAGCTCCTTTTCTTACTTTAGATGGTGAGTCAGAACTCATCAAAGTGGTCACAGCATCCCAATTGGCTAATGAAAGAAGCTATGGGATTATAGTTAACAGCTTCTATGAACTTGAACCAGCTTATGCAGATCATTATAGGAAGGTGTTTGGCAGGAAAGCATGGCATATAGGCCCAGCTTCTTTATGCGAGACAGAAAAAGATAAATTACAGAGGGGAAGGGAAGGCTCGGTTGATGAAGTAAATGAGTGTTTGAACTGGCTTAATTCTAAGAAACGCAATTCTGTTGTTTATATATGTTTTGGAAGCCTGACCAATTTCAGTGATTGTCAGCTCTTAGAAATCGCCTTGGCTCTTGAAGCTTCTCGACAGCAATTCATTTGGGTTGTGAAGAAAGAAAAGAATGATAAAGAAGAGTGGCTGCCTGAAGGATTTGAGCAGAGAGTGGAGGGAAAAGGATTGATTATAAGAGGTTCGGCTCCCCAACTACTGATTCTTCAACATGAAGCAGTTGGGGCCTTTCTCACTCATTGTGGGTGGAACTCAACCCTTGAAGCAGTGTGTGCTGGGATCCCAATGATCACGTGGCCAGTGTCCGCAGATCAGTTTTACAATGAGAAATTGGTGACTCAGATATTAGGTATTGGGGTTGCTGTTGGTGTTGAAAAATGGGAGGATGATAGTGTGAAGAGTGAAGCCAGTATGAAGAAGGAGACCATAGAGAAGGCCGTGACTGAATTCATGGTCAGTCATGAAAAAGAGGAAATGAGAAGCAAAATTCTTGAACTCAGAGACCTCGCACGGAGGGCAGTTGAAGAAGAAGAAGTGAGTGAAGAGCCTTGGATCTTCATCACCAGTGGTTCACTACACAAAGGCGCTGACAGTAAATATCAGCAGCTTCACATTTTCTTCCTTCCATACATGGCTCATGGCCACACTTTACCCCTCATAGACATAGCCAAACTATTCGCTTCCCATGGTTCCAAGTCCACCATCATAACCACCCCTCTCAATGCACCACTCATCTCTAAATCAATCCAATCAAGCAAAAGCTTGGGTTTAGAAATTGACCTTCTTGTCATCAAATTTCCATCTATTGAGGTTGGGTTGCCTGAAGGAATTGAAAGTGCTAACTTGGCTACAACCCGAGAGATGAAGGAAAAGCTCTACAAAGCCTGCACCCTGCTTGCACCACAGGTAGAGCAGATTTTAGAACAATATCATCCTCACTGCCTTGTTGCAGACAGTTTATATCATTGGGCTACAGATCTTGCTGCCAAGTTTGGGATTCCAAGGCTCATCTTTCATGGAATTAGTTTTTTCGCCTTGTGTGCTTCAATGAGTGCGATACTCTACCAACCTCACTTGAAGGTTTCATCTGATTCAGAATCTTTTGTTATTCCTAATCTTCCAGATGAGATCAAGACCACAAGAAACCAAGTACCAGCTTTTCTCAATCTAAATGGCAAAACAGAACTCATCAAGTTGGTCAAAGCATCTATAGAGGCTGAGGAAAGGAGCTATGGGAGTATTGTTAACAGCTTCTATGAACTTGAACCGGATTATGCAGATCATTATAGGAAAGTTTTGGGCAGGAAATCATGGCACATTGGCCCAGTTTCTCTATGCAACAAGGCAGAAACAGACAAATCAGAGAGGGGAAGGGGAGGATCTGTTGATGAAGTACATGAGTGCATGAATTGGCTTAATTCTAAGGAACCAAATTCAGTTGTTTATATCTGTTTTGGAAGCCTCACCATTTTCAGTGATTGTCAGCTCATAGAGATTGCCTTGGCTCTTGAGGCTTCTCAGCAGCAATTCATCTTGGTTGTGAAGAAGGAAAAGCATGATAAAGAAGAGTGGTTGCCTAAAGAGTTTGAGCGGAGAATGGAAGGTAAGGGACTCATTATAAGAGGCTGGGCTCCCCAACTACTAATTCTTGAACATGAAGCAACTGGGGCCTTTGTCACTCATTGCGGGTGGAACTCGATCCTTGAAGGAGTTTCTGCTGGGGTTCCAATGATCACGTGGCCGGTGACCGGAGAGCAGTTTTACAATGAGAAGCTGGTGACTGAGTTACTTAGGATTGGGGTTGCTGTTGGTGCCGAAAAGTGGGCTACATTTGAGGAGGAAAGTGCCAAGAGCGAAGCCAGTGTGAAGAGGGAGGCCATAGAGAAGGCTGTCACTGAAATCATGGTCGGTGATGAAGCAGAGGAAATGAGAAGCAGAGCTAAAGCGCTTAGAGAGATGGCAAGCAGGGCTGTTGAAGAAGGTGGTTCATCATTCTCGGATTTAACTGCTCTAATTGAAGAGTTGAAGTCCCTTGGGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

966

Amino Acids

108.24

Weight (kDa)

5.53

Isoelectric Point (pI)

46.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 273 - 408 3.8e-18 UDP-glucoronosyl and UDP-glucosyl transferase
UDPGT PF00201 753 - 880 1.6e-18 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000135)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G15480 AT2G15480 AT2G15490 AT2G15490 AT2G15490 AT4G34131 AT4G34135 AT4G34135 AT4G34138
fragaria_vesca FvH4_2g05600 FvH4_2g05601 FvH4_2g05602 FvH4_2g05603 FvH4_2g05604 FvH4_2g05630 FvH4_2g05660 FvH4_2g05662 FvH4_2g05663 FvH4_2g05671 FvH4_2g05680 FvH4_3g09760 FvH4_3g09780 FvH4_7g23180
malus_domestica MD00G1046200.v1.1 MD04G1214200.v1.1 MD05G1085700.v1.1 MD05G1085800.v1.1 MD05G1086200.v1.1 MD05G1086300.v1.1 MD05G1091500.v1.1 MD07G1007400.v1.1 MD07G1007500.v1.1 MD07G1007600.v1.1 MD17G1100000.v1.1 MD17G1100300.v1.1
prunus_persica Prupe.8G129800_v2.0.a1 Prupe.8G130100_v2.0.a1 Prupe.8G130200_v2.0.a1 Prupe.8G130300_v2.0.a1 Prupe.8G130400_v2.0.a1 Prupe.8G130500_v2.0.a1 Prupe.8G130600_v2.0.a1 Prupe.8G130700_v2.0.a1 Prupe.8G130800_v2.0.a1 Prupe.8G130900_v2.0.a1 Prupe.8G131000_v2.0.a1 Prupe.8G131000_v2.0.a1
pyrus_communis pycom05g08530 pycom05g08560 pycom07g00600 pycom07g00610 pycom07g00620 pycom17g09520 pycom2675g00060
rosa_chinensis RchiOBHm_Chr2g0111601 RchiOBHm_Chr2g0125751 RchiOBHm_Chr6g0248631 RchiOBHm_Chr6g0248721 RchiOBHm_Chr6g0255881 RchiOBHm_Chr6g0255911 RchiOBHm_Chr6g0255931 RchiOBHm_Chr6g0256041 RchiOBHm_Chr6g0256061 RchiOBHm_Chr6g0256081 RchiOBHm_Chr6g0256121 RchiOBHm_Chr6g0256131 RchiOBHm_Chr6g0256151 RchiOBHm_Chr6g0256161 RchiOBHm_Chr6g0256211 RchiOBHm_Chr6g0256221 RchiOBHm_Chr6g0256241 RchiOBHm_Chr6g0256251 RchiOBHm_Chr6g0256311 RchiOBHm_Chr6g0256331 RchiOBHm_Chr6g0256351 RchiOBHm_Chr6g0256361 RchiOBHm_Chr6g0256371 RchiOBHm_Chr6g0256411 RchiOBHm_Chr6g0256421 RchiOBHm_Chr6g0256431 RchiOBHm_Chr6g0256461 RchiOBHm_Chr6g0256471 RchiOBHm_Chr6g0256501 RchiOBHm_Chr6g0256511 RchiOBHm_Chr6g0256521 RchiOBHm_Chr6g0256531 RchiOBHm_Chr6g0256611 RchiOBHm_Chr6g0257761 RchiOBHm_Chr6g0276931
rosa_laevigata RLG00000014720 RLG00000014721 RLG00000014763 RLG00000014766 RLG00000014768 RLG00000014769 RLG00000014770 RLG00000014774 RLG00000014776 RLG00000014777 RLG00000014778 RLG00000014781 RLG00000014782 RLG00000014783 RLG00000014786 RLG00000014787 RLG00000014788 RLG00000014789 RLG00000014790 RLG00000014791 RLG00000014793 RLG00000014795 RLG00000014799 RLG00000014800 RLG00000014803 RLG00000014805 RLG00000015130 RLG00000015139
rosa_multiflora Rmu_co8160604.1_g000001 Rmu_sc0001598.1_g000016 Rmu_sc0001598.1_g000018 Rmu_sc0001598.1_g000024 Rmu_sc0001738.1_g000012 Rmu_sc0001738.1_g000013 Rmu_sc0001896.1_g000025 Rmu_sc0001896.1_g000029 Rmu_sc0001896.1_g000037 Rmu_sc0001896.1_g000039 Rmu_sc0002393.1_g000006 Rmu_sc0002553.1_g000039 Rmu_sc0004414.1_g000007 Rmu_sc0005080.1_g000001 Rmu_sc0005080.1_g000002 Rmu_sc0005080.1_g000003 Rmu_sc0005080.1_g000006 Rmu_sc0005080.1_g000007 Rmu_sc0005080.1_g000008 Rmu_sc0005080.1_g000010 Rmu_sc0005080.1_g000011 Rmu_sc0005080.1_g000012 Rmu_sc0008707.1_g000001 Rmu_sc0008707.1_g000003 Rmu_sc0008832.1_g000002 Rmu_sc0010826.1_g000012 Rmu_sc0011315.1_g000009 Rmu_sc0019708.1_g000001
rosa_roxburghii Rroxscaffold_2G00108580 Rroxscaffold_7G00208920 Rroxscaffold_7G00209240 Rroxscaffold_7G00209250 Rroxscaffold_7G00209260 Rroxscaffold_7G00209270 Rroxscaffold_7G00209360 Rroxscaffold_7G00209380 Rroxscaffold_7G00209390 Rroxscaffold_7G00209430 Rroxscaffold_7G00209440 Rroxscaffold_7G00209510 Rroxscaffold_7G00209540
rosa_rugosa Rorug05G0532600 Rorug05G0562400 Rorug05G0562500 Rorug05G0563000 Rorug05G0563100 Rorug05G0563300 Rorug05G0563300 Rorug05G0563600 Rorug05G0563700 Rorug05G0563800 Rorug05G0564000 Rorug05G0564100 Rorug05G0564200 Rorug05G0564300 Rorug05G0564400 Rorug05G0564500 Rorug05G0564600 Rorug05G0564600 Rorug05G0568600 Rorug05G0568700
rosa_wichuraiana Rw6G004280 Rw6G004380 Rw6G006940 Rw6G006950 Rw6G006960 Rw6G007000 Rw6G007090 Rw6G007100 Rw6G007110 Rw6G007150 Rw6G007160 Rw6G007170 Rw6G007200 Rw6G007210 Rw6G007240 Rw6G007250 Rw6G007280 Rw6G007290 Rw6G007300 Rw6G007310 Rw6G007320 Rw6G007340 Rw6G007350 Rw6G007360 Rw6G007380 Rw6G007660 Rw6G018660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1034, 2477
AasI GACNNNNNNGTC 1 cut(s) 1643
Acc65I GGTACC 1 cut(s) 480
AccB1I GGYRCC 2 cut(s) 480, 2669
AccBSI CCGCTC 1 cut(s) 2449
AciI CCGC 5 cut(s) 284, 478, 1164, 2449, 2544
AclWI GGATC 6 cut(s) 431, 1132, 1145, 1418, 2245, 2551
AcoI YGGCCR 3 cut(s) 1154, 1498, 2597
AcsI RAATTY 5 cut(s) 212, 1304, 1344, 1652, 2290
AcuI CTGAAG 5 cut(s) 246, 261, 280, 1014, 1701
AcvI CACGTG 3 cut(s) 104, 1152, 2595
AdeI CACNNNGTG 1 cut(s) 107
AfaI GTAC 4 cut(s) 293, 482, 2010, 2253
AfeI AGCGCT 1 cut(s) 2805
AfiI CCNNNNNNNGG 4 cut(s) 411, 1851, 2606, 2679
AhlI ACTAGT 1 cut(s) 467
AjnI CCWGG 1 cut(s) 529
AjuI GAANNNNNNNTTGG 4 cut(s) 1044, 1076, 2487, 2519
Alw26I GTCTC 4 cut(s) 539, 752, 1274, 1353
AlwI GGATC 6 cut(s) 431, 1132, 1145, 1418, 2245, 2551
Ama87I CYCGRG 1 cut(s) 1713
Aor51HI AGCGCT 1 cut(s) 2805
ApeKI GCWGC 7 cut(s) 19, 22, 401, 988, 1462, 1841, 2380
ApoI RAATTY 5 cut(s) 212, 1304, 1344, 1652, 2290
ArsI GACNNNNNNTTYG 2 cut(s) 189, 221
Asp718I GGTACC 1 cut(s) 480
AspLEI GCGC 2 cut(s) 1445, 2806
AspS9I GGNCC 5 cut(s) 437, 740, 1083, 2180, 2526
AsuC2I CCSGG 1 cut(s) 441
AsuHPI GGTGA 7 cut(s) 605, 1204, 1411, 2314, 2614, 2647, 2780
AsuII TTCGAA 1 cut(s) 189
AvaI CYCGRG 1 cut(s) 1713
AvaII GGWCC 1 cut(s) 437
BalI TGGCCA 2 cut(s) 1156, 1500
BamHI GGATCC 1 cut(s) 1137
BanI GGYRCC 2 cut(s) 480, 2669
BanII GRGCYC 1 cut(s) 2491
BbrPI CACGTG 3 cut(s) 104, 1152, 2595
BbvCI CCTCAGC 1 cut(s) 2076
BbvI GCAGC 7 cut(s) 31, 34, 388, 975, 1474, 1828, 2392
BccI CCATC 5 cut(s) 226, 584, 1568, 1666, 2809
BceAI ACGGC 1 cut(s) 1280
BciT130I CCWGG 1 cut(s) 531
BclI TGATCA 2 cut(s) 1146, 2589
BcnI CCSGG 1 cut(s) 441
BcoDI GTCTC 4 cut(s) 539, 752, 1274, 1353
BcuI ACTAGT 1 cut(s) 467
BfaI CTAG 3 cut(s) 171, 468, 569
BfmI CTRYAG 3 cut(s) 390, 1830, 2067
BfoI RGCGCY 2 cut(s) 1446, 2807
BglII AGATCT 1 cut(s) 1834
BisI GCNGC 7 cut(s) 20, 23, 402, 989, 1463, 1842, 2381
BlsI GCNGC 7 cut(s) 21, 24, 403, 990, 1464, 1843, 2382
BmcAI AGTACT 1 cut(s) 293
Bme1390I CCNGG 2 cut(s) 441, 531
Bme18I GGWCC 1 cut(s) 437
BmeT110I CYCGRG 1 cut(s) 1713
BmgT120I GGNCC 5 cut(s) 437, 740, 1083, 2180, 2526
BmrFI CCNGG 2 cut(s) 441, 531
BmrI ACTGGG 2 cut(s) 2177, 2532
BmsI GCATC 3 cut(s) 465, 632, 2072
BmuI ACTGGG 2 cut(s) 2177, 2532
Bpu10I CCTNAGC 1 cut(s) 2076
Bpu14I TTCGAA 1 cut(s) 189
BpuEI CTTGAG 3 cut(s) 39, 335, 2387
BpuMI CCSGG 1 cut(s) 441
BsaAI YACGTR 3 cut(s) 104, 1152, 2595
BsaBI GATNNNNATC 1 cut(s) 1415
BsaI GGTCTC 3 cut(s) 539, 1274, 1353
BsaJI CCNNGG 8 cut(s) 383, 419, 915, 1406, 1543, 1859, 2358, 2890
BsaWI WCCGGW 2 cut(s) 2125, 2606
BsaXI ACNNNNNCTCC 2 cut(s) 2226, 2256
Bsc4I CCNNNNNNNGG 4 cut(s) 411, 1851, 2606, 2679
Bse118I RCCGGY 1 cut(s) 2599
Bse1I ACTGG 7 cut(s) 830, 1157, 1266, 1422, 2183, 2527, 2718
Bse3DI GCAATG 1 cut(s) 2539
Bse8I GATNNNNATC 1 cut(s) 1415
BseBI CCWGG 1 cut(s) 531
BseDI CCNNGG 8 cut(s) 383, 419, 915, 1406, 1543, 1859, 2358, 2890
BseGI GGATG 3 cut(s) 623, 1249, 1789
BseJI GATNNNNATC 1 cut(s) 1415
BseLI CCNNNNNNNGG 4 cut(s) 411, 1851, 2606, 2679
BseMI GCAATG 1 cut(s) 2539
BseMII CTCAG 7 cut(s) 6, 503, 1211, 1369, 2067, 2390, 2631
BseNI ACTGG 7 cut(s) 830, 1157, 1266, 1422, 2183, 2527, 2718
BseRI GAGGAG 1 cut(s) 2708
BseXI GCAGC 7 cut(s) 31, 34, 388, 975, 1474, 1828, 2392
BseYI CCCAGC 4 cut(s) 742, 1133, 2484, 2576
BsgI GTGCAG 1 cut(s) 1729
BshNI GGYRCC 2 cut(s) 480, 2669
BsiHKCI CYCGRG 1 cut(s) 1713
BsiSI CCGG 4 cut(s) 441, 2126, 2600, 2607
BslFI GGGAC 2 cut(s) 2481, 2872
BslI CCNNNNNNNGG 4 cut(s) 411, 1851, 2606, 2679
BsmAI GTCTC 4 cut(s) 539, 752, 1274, 1353
BsmFI GGGAC 2 cut(s) 2481, 2872
Bso31I GGTCTC 3 cut(s) 539, 1274, 1353
BsoBI CYCGRG 1 cut(s) 1713
Bsp119I TTCGAA 1 cut(s) 189
Bsp1286I GDGCHC 1 cut(s) 2491
Bsp19I CCATGG 1 cut(s) 1543
BspACI CCGC 5 cut(s) 284, 478, 1164, 2449, 2544
BspCNI CTCAG 7 cut(s) 7, 502, 1210, 1368, 2068, 2389, 2632
BspHI TCATGA 2 cut(s) 1318, 2897
BspPI GGATC 6 cut(s) 431, 1132, 1145, 1418, 2245, 2551
BspQI GCTCTTC 1 cut(s) 1395
BspT104I TTCGAA 1 cut(s) 189
BspT107I GGYRCC 2 cut(s) 480, 2669
BspTNI GGTCTC 3 cut(s) 539, 1274, 1353
BsrBI CCGCTC 1 cut(s) 2449
BsrDI GCAATG 1 cut(s) 2539
BsrFI RCCGGY 1 cut(s) 2599
BsrI ACTGG 7 cut(s) 830, 1157, 1266, 1422, 2183, 2527, 2718
BssAI RCCGGY 1 cut(s) 2599
BssECI CCNNGG 8 cut(s) 383, 419, 915, 1406, 1543, 1859, 2358, 2890
BssT1I CCWWGG 8 cut(s) 383, 419, 915, 1406, 1543, 1859, 2358, 2890
Bst2UI CCWGG 1 cut(s) 531
Bst4CI ACNGT 3 cut(s) 359, 1451, 1814
Bst6I CTCTTC 6 cut(s) 975, 1250, 1395, 2418, 2720, 2871
BstAPI GCANNNNNTGC 1 cut(s) 1130
BstBAI YACGTR 3 cut(s) 104, 1152, 2595
BstBI TTCGAA 1 cut(s) 189
BstC8I GCNNGC 4 cut(s) 282, 1744, 1755, 2821
BstDSI CCRYGG 1 cut(s) 1543
BstEII GGTNACC 1 cut(s) 2602
BstF5I GGATG 3 cut(s) 623, 1249, 1789
BstH2I RGCGCY 2 cut(s) 1446, 2807
BstHHI GCGC 2 cut(s) 1445, 2806
BstMAI GTCTC 4 cut(s) 539, 752, 1274, 1353
BstNI CCWGG 1 cut(s) 531
BstPI GGTNACC 1 cut(s) 2602
BstSCI CCNGG 2 cut(s) 439, 529
BstSFI CTRYAG 3 cut(s) 390, 1830, 2067
BstV1I GCAGC 7 cut(s) 31, 34, 388, 975, 1474, 1828, 2392
BstX2I RGATCY 4 cut(s) 1137, 1410, 1834, 2237
BstYI RGATCY 4 cut(s) 1137, 1410, 1834, 2237
BtgI CCRYGG 1 cut(s) 1543
BtsCI GGATG 3 cut(s) 623, 1249, 1789
BtsI GCAGTG 2 cut(s) 1131, 1795
BtsIMutI CAGTG 9 cut(s) 355, 895, 1131, 1164, 1429, 1795, 2338, 2725, 2751
Cac8I GCNNGC 4 cut(s) 282, 1744, 1755, 2821
CciI TCATGA 2 cut(s) 1318, 2897
CfoI GCGC 2 cut(s) 1445, 2806
Cfr10I RCCGGY 1 cut(s) 2599
Cfr13I GGNCC 5 cut(s) 437, 740, 1083, 2180, 2526
Csp6I GTAC 4 cut(s) 292, 481, 2009, 2252
CviQI GTAC 4 cut(s) 292, 481, 2009, 2252
DraIII CACNNNGTG 1 cut(s) 107
DrdI GACNNNNNNGTC 1 cut(s) 1643
DseDI GACNNNNNNGTC 1 cut(s) 1643
EaeI YGGCCR 3 cut(s) 1154, 1498, 2597
Eam1104I CTCTTC 6 cut(s) 975, 1250, 1395, 2418, 2720, 2871
EarI CTCTTC 6 cut(s) 975, 1250, 1395, 2418, 2720, 2871
EciI GGCGGA 1 cut(s) 299
Eco130I CCWWGG 8 cut(s) 383, 419, 915, 1406, 1543, 1859, 2358, 2890
Eco24I GRGCYC 1 cut(s) 2491
Eco31I GGTCTC 3 cut(s) 539, 1274, 1353
Eco47I GGWCC 1 cut(s) 437
Eco47III AGCGCT 1 cut(s) 2805
Eco57I CTGAAG 5 cut(s) 246, 261, 280, 1014, 1701
Eco72I CACGTG 3 cut(s) 104, 1152, 2595
Eco88I CYCGRG 1 cut(s) 1713
Eco91I GGTNACC 1 cut(s) 2602
EcoO109I RGGNCCY 2 cut(s) 1083, 2526
EcoO65I GGTNACC 1 cut(s) 2602
EcoRI GAATTC 1 cut(s) 1304
EcoRII CCWGG 1 cut(s) 529
EcoT14I CCWWGG 8 cut(s) 383, 419, 915, 1406, 1543, 1859, 2358, 2890
EcoT38I GRGCYC 1 cut(s) 2491
ErhI CCWWGG 8 cut(s) 383, 419, 915, 1406, 1543, 1859, 2358, 2890
FaqI GGGAC 2 cut(s) 2481, 2872
FauI CCCGC 1 cut(s) 2537
FbaI TGATCA 2 cut(s) 1146, 2589
Fnu4HI GCNGC 7 cut(s) 20, 23, 402, 989, 1463, 1842, 2381
FokI GGATG 3 cut(s) 610, 1256, 1776
FriOI GRGCYC 1 cut(s) 2491
Fsp4HI GCNGC 7 cut(s) 20, 23, 402, 989, 1463, 1842, 2381
FspBI CTAG 3 cut(s) 171, 468, 569
GlaI GCGC 2 cut(s) 1444, 2805
GluI GCNGC 7 cut(s) 20, 23, 402, 989, 1463, 1842, 2381
GsaI CCCAGC 4 cut(s) 746, 1137, 2488, 2580
HaeII RGCGCY 2 cut(s) 1446, 2807
HapII CCGG 4 cut(s) 441, 2126, 2600, 2607
HhaI GCGC 2 cut(s) 1445, 2806
Hin6I GCGC 2 cut(s) 1443, 2804
HinP1I GCGC 2 cut(s) 1443, 2804
HincII GTYRAC 2 cut(s) 664, 2104
HindII GTYRAC 2 cut(s) 664, 2104
HindIII AAGCTT 2 cut(s) 927, 1618
HpaI GTTAAC 2 cut(s) 664, 2104
HpaII CCGG 4 cut(s) 441, 2126, 2600, 2607
HphI GGTGA 7 cut(s) 605, 1204, 1411, 2314, 2614, 2647, 2780
Hpy166II GTNNAC 4 cut(s) 664, 1430, 1557, 2104
Hpy8I GTNNAC 4 cut(s) 664, 1430, 1557, 2104
HpyCH4III ACNGT 3 cut(s) 359, 1451, 1814
HpyCH4IV ACGT 3 cut(s) 103, 1151, 2594
HpySE526I ACGT 3 cut(s) 103, 1151, 2594
HspAI GCGC 2 cut(s) 1443, 2804
KpnI GGTACC 1 cut(s) 484
Ksp22I TGATCA 2 cut(s) 1146, 2589
KspAI GTTAAC 2 cut(s) 664, 2104
LguI GCTCTTC 1 cut(s) 1395
LmnI GCTCC 4 cut(s) 577, 1051, 2085, 2494
Lsp1109I GCAGC 7 cut(s) 31, 34, 388, 975, 1474, 1828, 2392
LweI GCATC 3 cut(s) 465, 632, 2072
MaeI CTAG 3 cut(s) 171, 468, 569
MaeII ACGT 3 cut(s) 103, 1151, 2594
MaeIII GTNAC 8 cut(s) 616, 1192, 1297, 2533, 2602, 2635, 2643, 2749
MbiI CCGCTC 1 cut(s) 2449
MfeI CAATTG 1 cut(s) 629
MflI RGATCY 4 cut(s) 1137, 1410, 1834, 2237
MhlI GDGCHC 1 cut(s) 2491
MlsI TGGCCA 2 cut(s) 1156, 1500
MluNI TGGCCA 2 cut(s) 1156, 1500
MlyI GAGTC 4 cut(s) 365, 605, 1189, 2463
Mox20I TGGCCA 2 cut(s) 1156, 1500
MscI TGGCCA 2 cut(s) 1156, 1500
MseI TTAA 6 cut(s) 122, 663, 831, 2103, 2274, 2861
MslI CAYNNNNRTG 1 cut(s) 611
Msp20I TGGCCA 2 cut(s) 1156, 1500
MspI CCGG 4 cut(s) 441, 2126, 2600, 2607
MspR9I CCNGG 2 cut(s) 441, 531
MunI CAATTG 1 cut(s) 629
MvaI CCWGG 1 cut(s) 531
NciI CCSGG 1 cut(s) 441
NcoI CCATGG 1 cut(s) 1543
NmuCI GTSAC 7 cut(s) 616, 1192, 1297, 2533, 2602, 2635, 2749
NspV TTCGAA 1 cut(s) 189
PagI TCATGA 2 cut(s) 1318, 2897
PciSI GCTCTTC 1 cut(s) 1395
PfeI GAWTC 7 cut(s) 415, 509, 515, 1060, 1855, 1949, 1955
PkrI GCNGC 7 cut(s) 21, 24, 403, 990, 1464, 1843, 2382
PleI GAGTC 4 cut(s) 365, 604, 1189, 2463
PmaCI CACGTG 3 cut(s) 104, 1152, 2595
PmlI CACGTG 3 cut(s) 104, 1152, 2595
PpsI GAGTC 4 cut(s) 365, 604, 1189, 2463
Ppu21I YACGTR 3 cut(s) 104, 1152, 2595
PsiI TTATAA 2 cut(s) 1034, 2477
Psp6I CCWGG 1 cut(s) 529
PspCI CACGTG 3 cut(s) 104, 1152, 2595
PspEI GGTNACC 1 cut(s) 2602
PspFI CCCAGC 4 cut(s) 742, 1133, 2484, 2576
PspGI CCWGG 1 cut(s) 529
PspPI GGNCC 5 cut(s) 437, 740, 1083, 2180, 2526
PsuI RGATCY 4 cut(s) 1137, 1410, 1834, 2237
RsaI GTAC 4 cut(s) 293, 482, 2010, 2253
RsaNI GTAC 4 cut(s) 292, 481, 2009, 2252
RseI CAYNNNNRTG 1 cut(s) 611
SapI GCTCTTC 1 cut(s) 1395
SaqAI TTAA 6 cut(s) 122, 663, 831, 2103, 2274, 2861
SatI GCNGC 7 cut(s) 20, 23, 402, 989, 1463, 1842, 2381
Sau96I GGNCC 5 cut(s) 437, 740, 1083, 2180, 2526
ScaI AGTACT 1 cut(s) 293
SchI GAGTC 4 cut(s) 365, 605, 1189, 2463
ScrFI CCNGG 2 cut(s) 441, 531
SduI GDGCHC 1 cut(s) 2491
SfaNI GCATC 3 cut(s) 465, 632, 2072
SfcI CTRYAG 3 cut(s) 390, 1830, 2067
SfuI TTCGAA 1 cut(s) 189
SinI GGWCC 1 cut(s) 437
SmiMI CAYNNNNRTG 1 cut(s) 611
SmlI CTYRAG 3 cut(s) 54, 314, 2366
SmoI CTYRAG 3 cut(s) 54, 314, 2366
SpeI ACTAGT 1 cut(s) 467
SsiI CCGC 5 cut(s) 284, 478, 1164, 2449, 2544
SspMI CTAG 3 cut(s) 171, 468, 569
StyD4I CCNGG 2 cut(s) 439, 529
StyI CCWWGG 8 cut(s) 383, 419, 915, 1406, 1543, 1859, 2358, 2890
TaaI ACNGT 3 cut(s) 359, 1451, 1814
TaiI ACGT 3 cut(s) 106, 1154, 2597
TaqI TCGA 4 cut(s) 189, 195, 934, 2555
TatI WGTACW 2 cut(s) 291, 2251
TfiI GAWTC 7 cut(s) 415, 509, 515, 1060, 1855, 1949, 1955
Tru1I TTAA 6 cut(s) 122, 663, 831, 2103, 2274, 2861
Tru9I TTAA 6 cut(s) 122, 663, 831, 2103, 2274, 2861
TscAI CASTG 9 cut(s) 362, 895, 1131, 1164, 1429, 1802, 2338, 2725, 2758
TseFI GTSAC 7 cut(s) 616, 1192, 1297, 2533, 2602, 2635, 2749
TseI GCWGC 7 cut(s) 19, 22, 401, 988, 1462, 1841, 2380
Tsp45I GTSAC 7 cut(s) 616, 1192, 1297, 2533, 2602, 2635, 2749
TspGWI ACGGA 1 cut(s) 1384
TspRI CASTG 9 cut(s) 362, 895, 1131, 1164, 1429, 1802, 2338, 2725, 2758
VpaK11BI GGWCC 1 cut(s) 437
XapI RAATTY 5 cut(s) 212, 1304, 1344, 1652, 2290
XcmI CCANNNNNNNNNTGG 2 cut(s) 1149, 2592
XspI CTAG 3 cut(s) 171, 468, 569
ZrmI AGTACT 1 cut(s) 293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.