No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 145, 238 |
| AccBSI | CCGCTC | 1 cut(s) | 354 |
| AciI | CCGC | 6 cut(s) | 82, 187, 354, 385, 713, 926 |
| AclWI | GGATC | 3 cut(s) | 485, 674, 909 |
| AcoI | YGGCCR | 1 cut(s) | 240 |
| AcsI | RAATTY | 2 cut(s) | 368, 1139 |
| AcyI | GRCGYC | 2 cut(s) | 357, 722 |
| AfaI | GTAC | 4 cut(s) | 566, 1047, 1116, 1178 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 124, 145, 238 |
| AflII | CTTAAG | 1 cut(s) | 433 |
| AflIII | ACRYGT | 3 cut(s) | 95, 426, 1159 |
| AgsI | TTSAA | 2 cut(s) | 275, 554 |
| AjiI | CACGTC | 2 cut(s) | 98, 427 |
| AjnI | CCWGG | 3 cut(s) | 138, 539, 909 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 41, 73, 1147, 1179 |
| AluBI | AGCT | 4 cut(s) | 88, 467, 590, 740 |
| AluI | AGCT | 4 cut(s) | 88, 467, 590, 740 |
| Alw21I | GWGCWC | 1 cut(s) | 171 |
| Alw26I | GTCTC | 3 cut(s) | 104, 518, 644 |
| AlwI | GGATC | 3 cut(s) | 485, 674, 909 |
| Ama87I | CYCGRG | 1 cut(s) | 124 |
| AoxI | GGCC | 4 cut(s) | 115, 147, 240, 1134 |
| ApeKI | GCWGC | 3 cut(s) | 464, 590, 737 |
| ApoI | RAATTY | 2 cut(s) | 368, 1139 |
| AseI | ATTAAT | 1 cut(s) | 1149 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 918 |
| AspS9I | GGNCC | 4 cut(s) | 115, 259, 623, 907 |
| AsuC2I | CCSGG | 2 cut(s) | 125, 126 |
| AsuHPI | GGTGA | 5 cut(s) | 37, 175, 352, 887, 1203 |
| AvaI | CYCGRG | 1 cut(s) | 124 |
| AvaII | GGWCC | 3 cut(s) | 259, 623, 907 |
| BanII | GRGCYC | 2 cut(s) | 705, 799 |
| BauI | CACGAG | 1 cut(s) | 278 |
| Bbv12I | GWGCWC | 1 cut(s) | 171 |
| BbvCI | CCTCAGC | 1 cut(s) | 389 |
| BbvI | GCAGC | 3 cut(s) | 476, 577, 749 |
| BccI | CCATC | 2 cut(s) | 338, 1105 |
| BceAI | ACGGC | 1 cut(s) | 102 |
| BciT130I | CCWGG | 3 cut(s) | 140, 541, 911 |
| BciVI | GTATCC | 1 cut(s) | 975 |
| BcnI | CCSGG | 2 cut(s) | 125, 126 |
| BcoDI | GTCTC | 3 cut(s) | 104, 518, 644 |
| BfaI | CTAG | 2 cut(s) | 1002, 1170 |
| BfmI | CTRYAG | 2 cut(s) | 609, 1050 |
| BfrI | CTTAAG | 1 cut(s) | 433 |
| BfuI | GTATCC | 1 cut(s) | 975 |
| BisI | GCNGC | 4 cut(s) | 355, 465, 591, 738 |
| BlsI | GCNGC | 4 cut(s) | 356, 466, 592, 739 |
| BmcAI | AGTACT | 1 cut(s) | 566 |
| Bme1390I | CCNGG | 5 cut(s) | 125, 126, 140, 541, 911 |
| Bme18I | GGWCC | 3 cut(s) | 259, 623, 907 |
| BmeT110I | CYCGRG | 1 cut(s) | 124 |
| BmgBI | CACGTC | 2 cut(s) | 98, 427 |
| BmgT120I | GGNCC | 4 cut(s) | 115, 259, 623, 907 |
| BmiI | GGNNCC | 1 cut(s) | 702 |
| BmrFI | CCNGG | 5 cut(s) | 125, 126, 140, 541, 911 |
| BmsI | GCATC | 4 cut(s) | 118, 402, 856, 1015 |
| BpmI | CTGGAG | 1 cut(s) | 735 |
| Bpu10I | CCTNAGC | 1 cut(s) | 389 |
| BpuEI | CTTGAG | 2 cut(s) | 185, 1139 |
| BpuMI | CCSGG | 2 cut(s) | 125, 126 |
| Bsa29I | ATCGAT | 1 cut(s) | 489 |
| BsaAI | YACGTR | 1 cut(s) | 1180 |
| BsaBI | GATNNNNATC | 1 cut(s) | 684 |
| BsaHI | GRCGYC | 2 cut(s) | 357, 722 |
| BsaJI | CCNNGG | 4 cut(s) | 124, 138, 337, 400 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 124, 145, 238 |
| Bse3DI | GCAATG | 1 cut(s) | 104 |
| Bse8I | GATNNNNATC | 1 cut(s) | 684 |
| BseBI | CCWGG | 3 cut(s) | 140, 541, 911 |
| BseCI | ATCGAT | 1 cut(s) | 489 |
| BseDI | CCNNGG | 4 cut(s) | 124, 138, 337, 400 |
| BseGI | GGATG | 6 cut(s) | 162, 192, 330, 396, 685, 934 |
| BseJI | GATNNNNATC | 1 cut(s) | 684 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 124, 145, 238 |
| BseMI | GCAATG | 1 cut(s) | 104 |
| BseMII | CTCAG | 1 cut(s) | 403 |
| BseRI | GAGGAG | 3 cut(s) | 218, 296, 738 |
| BseXI | GCAGC | 3 cut(s) | 476, 577, 749 |
| BshFI | GGCC | 4 cut(s) | 117, 149, 242, 1136 |
| BshVI | ATCGAT | 1 cut(s) | 489 |
| BsiHKAI | GWGCWC | 1 cut(s) | 171 |
| BsiHKCI | CYCGRG | 1 cut(s) | 124 |
| BsiSI | CCGG | 1 cut(s) | 125 |
| BslFI | GGGAC | 2 cut(s) | 1028, 1137 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 124, 145, 238 |
| BsmAI | GTCTC | 3 cut(s) | 104, 518, 644 |
| BsmBI | CGTCTC | 2 cut(s) | 104, 518 |
| BsmFI | GGGAC | 2 cut(s) | 1028, 1137 |
| BsnI | GGCC | 4 cut(s) | 117, 149, 242, 1136 |
| BsoBI | CYCGRG | 1 cut(s) | 124 |
| Bsp1286I | GDGCHC | 3 cut(s) | 171, 705, 799 |
| Bsp143I | GATC | 5 cut(s) | 490, 679, 901, 1057, 1238 |
| BspACI | CCGC | 6 cut(s) | 82, 187, 354, 385, 713, 926 |
| BspANI | GGCC | 4 cut(s) | 117, 149, 242, 1136 |
| BspCNI | CTCAG | 1 cut(s) | 402 |
| BspDI | ATCGAT | 1 cut(s) | 489 |
| BspLI | GGNNCC | 1 cut(s) | 702 |
| BspPI | GGATC | 3 cut(s) | 485, 674, 909 |
| BspTI | CTTAAG | 1 cut(s) | 433 |
| BsrBI | CCGCTC | 1 cut(s) | 354 |
| BsrDI | GCAATG | 1 cut(s) | 104 |
| BssECI | CCNNGG | 4 cut(s) | 124, 138, 337, 400 |
| BssMI | GATC | 5 cut(s) | 490, 679, 901, 1057, 1238 |
| BssNI | GRCGYC | 2 cut(s) | 357, 722 |
| BssSI | CACGAG | 1 cut(s) | 278 |
| BssT1I | CCWWGG | 1 cut(s) | 337 |
| Bst2BI | CACGAG | 1 cut(s) | 278 |
| Bst2UI | CCWGG | 3 cut(s) | 140, 541, 911 |
| Bst4CI | ACNGT | 5 cut(s) | 57, 173, 295, 655, 665 |
| Bst6I | CTCTTC | 2 cut(s) | 22, 633 |
| BstACI | GRCGYC | 2 cut(s) | 357, 722 |
| BstAFI | CTTAAG | 1 cut(s) | 433 |
| BstBAI | YACGTR | 1 cut(s) | 1180 |
| BstC8I | GCNNGC | 2 cut(s) | 86, 1078 |
| BstDEI | CTNAG | 2 cut(s) | 389, 957 |
| BstF5I | GGATG | 6 cut(s) | 162, 192, 330, 396, 685, 934 |
| BstKTI | GATC | 5 cut(s) | 493, 682, 904, 1060, 1241 |
| BstMAI | GTCTC | 3 cut(s) | 104, 518, 644 |
| BstMBI | GATC | 5 cut(s) | 490, 679, 901, 1057, 1238 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 526, 719, 1142 |
| BstNI | CCWGG | 3 cut(s) | 140, 541, 911 |
| BstNSI | RCATGY | 1 cut(s) | 1163 |
| BstSCI | CCNGG | 5 cut(s) | 123, 124, 138, 539, 909 |
| BstSFI | CTRYAG | 2 cut(s) | 609, 1050 |
| BstV1I | GCAGC | 3 cut(s) | 476, 577, 749 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 547 |
| Bsu15I | ATCGAT | 1 cut(s) | 489 |
| BsuI | GTATCC | 1 cut(s) | 975 |
| BsuRI | GGCC | 4 cut(s) | 117, 149, 242, 1136 |
| BsuTUI | ATCGAT | 1 cut(s) | 489 |
| BtrI | CACGTC | 2 cut(s) | 98, 427 |
| BtsCI | GGATG | 6 cut(s) | 162, 192, 330, 396, 685, 934 |
| BtsIMutI | CAGTG | 1 cut(s) | 178 |
| Cac8I | GCNNGC | 2 cut(s) | 86, 1078 |
| Cfr13I | GGNCC | 4 cut(s) | 115, 259, 623, 907 |
| Cfr9I | CCCGGG | 1 cut(s) | 124 |
| ClaI | ATCGAT | 1 cut(s) | 489 |
| CseI | GACGC | 5 cut(s) | 346, 535, 611, 711, 752 |
| Csp6I | GTAC | 4 cut(s) | 565, 1046, 1115, 1177 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 678, 713 |
| CviAII | CATG | 7 cut(s) | 30, 238, 256, 313, 803, 854, 1160 |
| CviQI | GTAC | 4 cut(s) | 565, 1046, 1115, 1177 |
| DdeI | CTNAG | 2 cut(s) | 389, 957 |
| DpnI | GATC | 5 cut(s) | 492, 681, 903, 1059, 1240 |
| DpnII | GATC | 5 cut(s) | 490, 679, 901, 1057, 1238 |
| EaeI | YGGCCR | 1 cut(s) | 240 |
| Eam1104I | CTCTTC | 2 cut(s) | 22, 633 |
| EarI | CTCTTC | 2 cut(s) | 22, 633 |
| Eco130I | CCWWGG | 1 cut(s) | 337 |
| Eco24I | GRGCYC | 2 cut(s) | 705, 799 |
| Eco32I | GATATC | 1 cut(s) | 310 |
| Eco47I | GGWCC | 3 cut(s) | 259, 623, 907 |
| Eco88I | CYCGRG | 1 cut(s) | 124 |
| EcoO109I | RGGNCCY | 1 cut(s) | 623 |
| EcoRII | CCWGG | 3 cut(s) | 138, 539, 909 |
| EcoRV | GATATC | 1 cut(s) | 310 |
| EcoT14I | CCWWGG | 1 cut(s) | 337 |
| EcoT22I | ATGCAT | 1 cut(s) | 784 |
| EcoT38I | GRGCYC | 2 cut(s) | 705, 799 |
| ErhI | CCWWGG | 1 cut(s) | 337 |
| Esp3I | CGTCTC | 2 cut(s) | 104, 518 |
| FaeI | CATG | 7 cut(s) | 33, 241, 259, 316, 806, 857, 1163 |
| FaqI | GGGAC | 2 cut(s) | 1028, 1137 |
| FatI | CATG | 7 cut(s) | 29, 237, 255, 312, 802, 853, 1159 |
| FauI | CCCGC | 1 cut(s) | 194 |
| FauNDI | CATATG | 2 cut(s) | 784, 1035 |
| Fnu4HI | GCNGC | 4 cut(s) | 355, 465, 591, 738 |
| FokI | GGATG | 6 cut(s) | 169, 179, 317, 383, 672, 941 |
| FriOI | GRGCYC | 2 cut(s) | 705, 799 |
| Fsp4HI | GCNGC | 4 cut(s) | 355, 465, 591, 738 |
| FspBI | CTAG | 2 cut(s) | 1002, 1170 |
| GluI | GCNGC | 4 cut(s) | 355, 465, 591, 738 |
| GsuI | CTGGAG | 1 cut(s) | 735 |
| HaeIII | GGCC | 4 cut(s) | 117, 149, 242, 1136 |
| HapII | CCGG | 1 cut(s) | 125 |
| HgaI | GACGC | 5 cut(s) | 346, 535, 611, 711, 752 |
| Hin1I | GRCGYC | 2 cut(s) | 357, 722 |
| Hin1II | CATG | 7 cut(s) | 33, 241, 259, 316, 806, 857, 1163 |
| HincII | GTYRAC | 2 cut(s) | 559, 661 |
| HindII | GTYRAC | 2 cut(s) | 559, 661 |
| HindIII | AAGCTT | 1 cut(s) | 86 |
| HinfI | GANTC | 4 cut(s) | 131, 248, 302, 498 |
| HpaI | GTTAAC | 1 cut(s) | 661 |
| HpaII | CCGG | 1 cut(s) | 125 |
| HphI | GGTGA | 5 cut(s) | 37, 175, 352, 887, 1203 |
| Hpy166II | GTNNAC | 2 cut(s) | 559, 661 |
| Hpy188I | TCNGA | 6 cut(s) | 291, 307, 401, 813, 976, 1110 |
| Hpy188III | TCNNGA | 4 cut(s) | 154, 320, 752, 946 |
| Hpy8I | GTNNAC | 2 cut(s) | 559, 661 |
| Hpy99I | CGWCG | 4 cut(s) | 248, 295, 428, 727 |
| HpyAV | CCTTC | 1 cut(s) | 160 |
| HpyCH4III | ACNGT | 5 cut(s) | 57, 173, 295, 655, 665 |
| HpyCH4IV | ACGT | 3 cut(s) | 97, 426, 1179 |
| HpyCH4V | TGCA | 6 cut(s) | 109, 255, 782, 847, 853, 1039 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 526, 719, 1142 |
| HpyF3I | CTNAG | 2 cut(s) | 389, 957 |
| HpySE526I | ACGT | 3 cut(s) | 97, 426, 1179 |
| Hsp92I | GRCGYC | 2 cut(s) | 357, 722 |
| Hsp92II | CATG | 7 cut(s) | 33, 241, 259, 316, 806, 857, 1163 |
| KspAI | GTTAAC | 1 cut(s) | 661 |
| Kzo9I | GATC | 5 cut(s) | 490, 679, 901, 1057, 1238 |
| LmnI | GCTCC | 4 cut(s) | 587, 610, 700, 734 |
| Lsp1109I | GCAGC | 3 cut(s) | 476, 577, 749 |
| LweI | GCATC | 4 cut(s) | 118, 402, 856, 1015 |
| MaeI | CTAG | 2 cut(s) | 1002, 1170 |
| MaeII | ACGT | 3 cut(s) | 97, 426, 1179 |
| MaeIII | GTNAC | 4 cut(s) | 119, 181, 358, 513 |
| MalI | GATC | 5 cut(s) | 492, 681, 903, 1059, 1240 |
| MbiI | CCGCTC | 1 cut(s) | 354 |
| MboI | GATC | 5 cut(s) | 490, 679, 901, 1057, 1238 |
| MboII | GAAGA | 8 cut(s) | 9, 364, 620, 926, 988, 1067, 1093, 1195 |
| MhlI | GDGCHC | 3 cut(s) | 171, 705, 799 |
| MluCI | AATT | 4 cut(s) | 368, 405, 532, 1139 |
| MlyI | GAGTC | 2 cut(s) | 140, 257 |
| MmeI | TCCRAC | 3 cut(s) | 314, 565, 712 |
| Mph1103I | ATGCAT | 1 cut(s) | 784 |
| MroXI | GAANNNNTTC | 1 cut(s) | 918 |
| MseI | TTAA | 5 cut(s) | 264, 434, 660, 1149, 1243 |
| MslI | CAYNNNNRTG | 3 cut(s) | 852, 858, 1109 |
| MspCI | CTTAAG | 1 cut(s) | 433 |
| MspI | CCGG | 1 cut(s) | 125 |
| MspR9I | CCNGG | 5 cut(s) | 125, 126, 140, 541, 911 |
| MvaI | CCWGG | 3 cut(s) | 140, 541, 911 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 526, 719, 1142 |
| NciI | CCSGG | 2 cut(s) | 125, 126 |
| NdeI | CATATG | 2 cut(s) | 784, 1035 |
| NdeII | GATC | 5 cut(s) | 490, 679, 901, 1057, 1238 |
| NlaIII | CATG | 7 cut(s) | 33, 241, 259, 316, 806, 857, 1163 |
| NlaIV | GGNNCC | 1 cut(s) | 702 |
| NmuCI | GTSAC | 3 cut(s) | 119, 181, 358 |
| NsiI | ATGCAT | 1 cut(s) | 784 |
| NspI | RCATGY | 1 cut(s) | 1163 |
| PciI | ACATGT | 1 cut(s) | 1159 |
| PdmI | GAANNNNTTC | 1 cut(s) | 918 |
| PfeI | GAWTC | 2 cut(s) | 302, 498 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 145, 238 |
| PfoI | TCCNGGA | 1 cut(s) | 909 |
| PkrI | GCNGC | 4 cut(s) | 356, 466, 592, 739 |
| PleI | GAGTC | 2 cut(s) | 139, 256 |
| PpsI | GAGTC | 2 cut(s) | 139, 256 |
| Ppu21I | YACGTR | 1 cut(s) | 1180 |
| PpuMI | RGGWCCY | 1 cut(s) | 623 |
| PscI | ACATGT | 1 cut(s) | 1159 |
| PshBI | ATTAAT | 1 cut(s) | 1149 |
| Psp5II | RGGWCCY | 1 cut(s) | 623 |
| Psp6I | CCWGG | 3 cut(s) | 138, 539, 909 |
| PspGI | CCWGG | 3 cut(s) | 138, 539, 909 |
| PspN4I | GGNNCC | 1 cut(s) | 702 |
| PspPI | GGNCC | 4 cut(s) | 115, 259, 623, 907 |
| PspPPI | RGGWCCY | 1 cut(s) | 623 |
| RsaI | GTAC | 4 cut(s) | 566, 1047, 1116, 1178 |
| RsaNI | GTAC | 4 cut(s) | 565, 1046, 1115, 1177 |
| RseI | CAYNNNNRTG | 3 cut(s) | 852, 858, 1109 |
| SaqAI | TTAA | 5 cut(s) | 264, 434, 660, 1149, 1243 |
| SatI | GCNGC | 4 cut(s) | 355, 465, 591, 738 |
| Sau3AI | GATC | 5 cut(s) | 490, 679, 901, 1057, 1238 |
| Sau96I | GGNCC | 4 cut(s) | 115, 259, 623, 907 |
| ScaI | AGTACT | 1 cut(s) | 566 |
| SchI | GAGTC | 2 cut(s) | 140, 257 |
| ScrFI | CCNGG | 5 cut(s) | 125, 126, 140, 541, 911 |
| SduI | GDGCHC | 3 cut(s) | 171, 705, 799 |
| SfaNI | GCATC | 4 cut(s) | 118, 402, 856, 1015 |
| SfcI | CTRYAG | 2 cut(s) | 609, 1050 |
| SinI | GGWCC | 3 cut(s) | 259, 623, 907 |
| SmaI | CCCGGG | 1 cut(s) | 126 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 852, 858, 1109 |
| SmlI | CTYRAG | 3 cut(s) | 164, 433, 1118 |
| SmoI | CTYRAG | 3 cut(s) | 164, 433, 1118 |
| Sse9I | AATT | 4 cut(s) | 368, 405, 532, 1139 |
| SsiI | CCGC | 6 cut(s) | 82, 187, 354, 385, 713, 926 |
| SspMI | CTAG | 2 cut(s) | 1002, 1170 |
| StyD4I | CCNGG | 5 cut(s) | 123, 124, 138, 539, 909 |
| StyI | CCWWGG | 1 cut(s) | 337 |
| TaaI | ACNGT | 5 cut(s) | 57, 173, 295, 655, 665 |
| TaiI | ACGT | 3 cut(s) | 100, 429, 1182 |
| TaqI | TCGA | 3 cut(s) | 207, 489, 1237 |
| TasI | AATT | 4 cut(s) | 368, 405, 532, 1139 |
| TatI | WGTACW | 1 cut(s) | 564 |
| TauI | GCSGC | 1 cut(s) | 357 |
| TfiI | GAWTC | 2 cut(s) | 302, 498 |
| Tru1I | TTAA | 5 cut(s) | 264, 434, 660, 1149, 1243 |
| Tru9I | TTAA | 5 cut(s) | 264, 434, 660, 1149, 1243 |
| TscAI | CASTG | 1 cut(s) | 178 |
| TseFI | GTSAC | 3 cut(s) | 119, 181, 358 |
| TseI | GCWGC | 3 cut(s) | 464, 590, 737 |
| Tsp45I | GTSAC | 3 cut(s) | 119, 181, 358 |
| TspDTI | ATGAA | 3 cut(s) | 54, 181, 1093 |
| TspMI | CCCGGG | 1 cut(s) | 124 |
| TspRI | CASTG | 1 cut(s) | 178 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 145, 238 |
| Vha464I | CTTAAG | 1 cut(s) | 433 |
| VpaK11BI | GGWCC | 3 cut(s) | 259, 623, 907 |
| VspI | ATTAAT | 1 cut(s) | 1149 |
| XapI | RAATTY | 2 cut(s) | 368, 1139 |
| XceI | RCATGY | 1 cut(s) | 1163 |
| XmaI | CCCGGG | 1 cut(s) | 124 |
| XmnI | GAANNNNTTC | 1 cut(s) | 918 |
| XspI | CTAG | 2 cut(s) | 1002, 1170 |
| ZrmI | AGTACT | 1 cut(s) | 566 |
| Zsp2I | ATGCAT | 1 cut(s) | 784 |