Rh6DG163800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000612
Physical Location & Seq
Forward (+)
25092251 .. 25093537
1287 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG163800.1

Sequence Viewer

Length: 1287 bp
ATGGCAATCATACCTCTTATGACATACGATGCTTCCCACGCACTGTTCCCAACACTTGTTCAAGACAATTGGAATACGATAATGAGCACCAATGCTGCATTGGTGCACAATGCTATTAACTCTGGCATTCCTCCACTAGAGCCCGAAGAAGATCGGACTATCGTCGTAACATTCTCTACTGTAGACCCTATTCCGGAACGTGAACTTAGAGACTTCTTTACTTGGTATATATATTGTACAACTGGGAATCTTACAGTTATGGATCATCATCATGTTATTGCTGCCATCCGTATGGAAAGTGTCCAACCCGGGGAGCGACCTTTTTGTGCCTACATTGTGTTTCGATATGCTTCTTTGGTTGCACGTGTCCTTGGTGGAAACCAGAAGATGACATTCCACATTAATAGGTTTATTGTTTCCGGTAGGAAATATGAGCAGTCTCTAGAAGAGTTTAACAAATTTCACAACATTGATCGGAGGCTCTTCACTCGTTTAATCTACGATCTGAGACGTGACCTGGATGAATCAGCAGGGGTCATGGCATTGTGGATGTCGCTGGAGCACACCAGCAAGGAGTTTAACAACTTGGTGAACAAGGCATTGACTCTACCCGACACTGAGCTCAATGCCATGGCCGACGAGACGGTAATAGCCTTGAATTACATTAAGATTGATGATATCCAGAGTGACACGGAAATGCCTAAGCTCCAAGCCATAAGTGAAAGTCCTGTCACCCTCAAGTTCTTCCATGACAACCGCCATGTGATCATTTGCGCAGCCATCAAGTTTCTCCAAGATGTTTGCTTGAGAGCTTTTCAGGACTTCCCTTATCAACCATACTACCATGCCAAGGCGAAGCTTATTGAAGAAACTAGCATCATTTTTCATCAAGAGAGCCAGATCGAGAATAAAGTAGCGGGGGAGACTTGTAGGAATTTGCCGTTGAGTGATAATGAGTGTGATGAACAAGAGAGGACTCTTTTCCTAACATTCTCTAAAGGGTTCCCCCTTTCGGAAAATGAAGTCCGAGAGTGTTTCACTAGGGAATTTGGTGATATTATTGATCGTATCGACATGCAAGAAGTTAAGGAAAAGTATCAGCAGCCTCTTTTTGCTCAACTAGTGGTTCGTTCGGCATCCTTGATTCCAGTGATTCTTGATGGAAGAAGCAAGGTGTGCTTGAGCATAAATGGCAAGCACATTAGGGCCAAAAAATCTGTGCCTAGGCTGCGATCAAAATCACCAGAAGCATCATCCCCAACCATCATAAGGCCTACTACTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

428

Amino Acids

49.18

Weight (kDa)

5.77

Isoelectric Point (pI)

57.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000612)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G49290 AT5G13620
fragaria_vesca FvH4_1g08631 FvH4_2g11491 FvH4_3g26240 FvH4_7g20310 FvH4_7g20310 FvH4_7g20311
malus_domestica MD02G1091200.v1.1 MD07G1180400.v1.1 MD15G1217400.v1.1
prunus_persica Prupe.2G219300_v2.0.a1 Prupe.2G219700_v2.0.a1 Prupe.7G199100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0364241 RchiOBHm_Chr1g0364261 RchiOBHm_Chr2g0094911 RchiOBHm_Chr5g0048831 RchiOBHm_Chr5g0048891 RchiOBHm_Chr5g0048921 RchiOBHm_Chr6g0270221
rosa_laevigata RLG00000013804 RLG00000016530 RLG00000027499 RLG00000027502 RLG00000027503 RLG00000034558
rosa_multiflora Rmu_co8509593.1_g000001 Rmu_sc0002138.1_g000006 Rmu_sc0003628.1_g000024 Rmu_sc0006611.1_g000002 Rmu_sc0011253.1_g000002 Rmu_sc0011664.1_g000001 Rmu_sc0023830.1_g000002 Rmu_sc0023830.1_g000003
rosa_roxburghii Rroxscaffold_1G00033000 Rroxscaffold_2G00146780 Rroxscaffold_4G00292480 Rroxscaffold_4G00292520 Rroxscaffold_4G00292540 Rroxscaffold_7G00198040
rosa_rugosa Rorug01G0315200 Rorug01G0315300.1 Rorug02G0048800 Rorug05G0241300 Rorug06G0053800
rosa_samantha Rh1AG322400 Rh1AG322500 Rh1BG285300 Rh1BG285400 Rh1CG301700 Rh1CG301900 Rh1DG316700 Rh1DG316800 Rh2AG095400 Rh2BG096400 Rh2CG098400 Rh2DG095100 Rh5AG321000 Rh5AG321300 Rh5BG331300 Rh5BG331400 Rh5BG331500 Rh5CG356900 Rh5DG342800 Rh5DG342900 Rh5DG343100 Rh5DG343300 Rh6AG172300 Rh6BG176600 Rh6CG172500 Rh6DG163800
rosa_wichuraiana Rw1G028560 Rw1G028570 Rw2G007180 Rw5G030080 Rw5G030110 Rw5G030290 Rw5G030320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 775
AccI GTMKAC 1 cut(s) 183
AccIII TCCGGA 1 cut(s) 193
AciI CCGC 2 cut(s) 757, 917
AclWI GGATC 1 cut(s) 270
AcoI YGGCCR 1 cut(s) 633
AcsI RAATTY 3 cut(s) 458, 934, 1046
AcvI CACGTG 1 cut(s) 365
AfaI GTAC 1 cut(s) 238
AfiI CCNNNNNNNGG 5 cut(s) 193, 310, 850, 1012, 1269
AflIII ACRYGT 1 cut(s) 364
AgsI TTSAA 3 cut(s) 62, 658, 866
AhlI ACTAGT 1 cut(s) 1120
AjiI CACGTC 1 cut(s) 512
AjnI CCWGG 1 cut(s) 516
AluBI AGCT 4 cut(s) 622, 706, 812, 859
AluI AGCT 4 cut(s) 622, 706, 812, 859
Alw21I GWGCWC 4 cut(s) 89, 108, 564, 624
Alw26I GTCTC 5 cut(s) 204, 444, 502, 635, 917
Alw44I GTGCAC 1 cut(s) 104
AlwI GGATC 1 cut(s) 270
Ama87I CYCGRG 1 cut(s) 308
Aor13HI TCCGGA 1 cut(s) 193
AoxI GGCC 3 cut(s) 633, 1206, 1271
ApaLI GTGCAC 1 cut(s) 104
ApeKI GCWGC 5 cut(s) 95, 281, 776, 1102, 1228
ApoI RAATTY 3 cut(s) 458, 934, 1046
AseI ATTAAT 1 cut(s) 402
AspA2I CCTAGG 1 cut(s) 1223
AspLEI GCGC 1 cut(s) 776
AspS9I GGNCC 1 cut(s) 1206
AsuC2I CCSGG 2 cut(s) 309, 310
AsuHPI GGTGA 4 cut(s) 601, 724, 1064, 1233
AvaI CYCGRG 1 cut(s) 308
AvrII CCTAGG 1 cut(s) 1223
BaeGI GKGCMC 1 cut(s) 108
BanII GRGCYC 2 cut(s) 144, 624
BbrPI CACGTG 1 cut(s) 365
Bbv12I GWGCWC 4 cut(s) 89, 108, 564, 624
BbvI GCAGC 5 cut(s) 82, 268, 788, 1114, 1215
BccI CCATC 4 cut(s) 293, 788, 1154, 1271
BceAI ACGGC 1 cut(s) 925
BciT130I CCWGG 1 cut(s) 518
BclI TGATCA 1 cut(s) 765
BcnI CCSGG 2 cut(s) 309, 310
BcoDI GTCTC 5 cut(s) 204, 444, 502, 635, 917
BcuI ACTAGT 1 cut(s) 1120
BfaI CTAG 6 cut(s) 137, 443, 873, 1041, 1121, 1224
BfmI CTRYAG 1 cut(s) 180
BisI GCNGC 5 cut(s) 96, 282, 777, 1103, 1229
BlnI CCTAGG 1 cut(s) 1223
BlsI GCNGC 5 cut(s) 97, 283, 778, 1104, 1230
Bme1390I CCNGG 3 cut(s) 309, 310, 518
BmeT110I CYCGRG 1 cut(s) 308
BmgBI CACGTC 1 cut(s) 512
BmgT120I GGNCC 1 cut(s) 1206
BmiI GGNNCC 1 cut(s) 1004
BmrFI CCNGG 3 cut(s) 309, 310, 518
BmrI ACTGGG 1 cut(s) 252
BmsI GCATC 4 cut(s) 19, 885, 1145, 1259
BmuI ACTGGG 1 cut(s) 252
BoxI GACNNNNGTC 1 cut(s) 161
BpmI CTGGAG 1 cut(s) 578
Bpu10I CCTNAGC 1 cut(s) 702
BpuEI CTTGAG 3 cut(s) 722, 826, 1201
BpuMI CCSGG 2 cut(s) 309, 310
BsaAI YACGTR 1 cut(s) 365
BsaBI GATNNNNATC 2 cut(s) 267, 1237
BsaJI CCNNGG 6 cut(s) 308, 309, 370, 630, 849, 1223
BsaWI WCCGGW 2 cut(s) 193, 419
Bsc4I CCNNNNNNNGG 5 cut(s) 193, 310, 850, 1012, 1269
Bse1I ACTGG 2 cut(s) 247, 1148
Bse8I GATNNNNATC 2 cut(s) 267, 1237
BseAI TCCGGA 1 cut(s) 193
BseBI CCWGG 1 cut(s) 518
BseDI CCNNGG 6 cut(s) 308, 309, 370, 630, 849, 1223
BseGI GGATG 5 cut(s) 285, 526, 555, 1136, 1253
BseJI GATNNNNATC 2 cut(s) 267, 1237
BseLI CCNNNNNNNGG 5 cut(s) 193, 310, 850, 1012, 1269
BseMII CTCAG 2 cut(s) 497, 609
BseNI ACTGG 2 cut(s) 247, 1148
BseSI GKGCMC 1 cut(s) 108
BseXI GCAGC 5 cut(s) 82, 268, 788, 1114, 1215
BshFI GGCC 3 cut(s) 635, 1208, 1273
BsiHKAI GWGCWC 4 cut(s) 89, 108, 564, 624
BsiHKCI CYCGRG 1 cut(s) 308
BsiSI CCGG 3 cut(s) 194, 309, 420
BslI CCNNNNNNNGG 5 cut(s) 193, 310, 850, 1012, 1269
BsmAI GTCTC 5 cut(s) 204, 444, 502, 635, 917
BsmBI CGTCTC 2 cut(s) 502, 635
BsmI GAATGC 1 cut(s) 126
BsnI GGCC 3 cut(s) 635, 1208, 1273
BsoBI CYCGRG 1 cut(s) 308
Bsp1286I GDGCHC 5 cut(s) 89, 108, 144, 564, 624
Bsp13I TCCGGA 1 cut(s) 193
Bsp1407I TGTACA 1 cut(s) 236
Bsp143I GATC 8 cut(s) 151, 262, 472, 502, 765, 900, 1063, 1232
Bsp19I CCATGG 1 cut(s) 630
BspACI CCGC 2 cut(s) 757, 917
BspANI GGCC 3 cut(s) 635, 1208, 1273
BspCNI CTCAG 2 cut(s) 498, 610
BspEI TCCGGA 1 cut(s) 193
BspLI GGNNCC 1 cut(s) 1004
BspPI GGATC 1 cut(s) 270
BspQI GCTCTTC 1 cut(s) 488
BsrGI TGTACA 1 cut(s) 236
BsrI ACTGG 2 cut(s) 247, 1148
BssECI CCNNGG 6 cut(s) 308, 309, 370, 630, 849, 1223
BssMI GATC 8 cut(s) 151, 262, 472, 502, 765, 900, 1063, 1232
BssT1I CCWWGG 4 cut(s) 370, 630, 849, 1223
Bst2UI CCWGG 1 cut(s) 518
Bst4CI ACNGT 4 cut(s) 45, 181, 256, 646
Bst6I CTCTTC 2 cut(s) 441, 488
BstAPI GCANNNNNTGC 1 cut(s) 1176
BstAUI TGTACA 1 cut(s) 236
BstBAI YACGTR 1 cut(s) 365
BstC8I GCNNGC 1 cut(s) 1196
BstDEI CTNAG 4 cut(s) 206, 506, 618, 702
BstDSI CCRYGG 1 cut(s) 630
BstF5I GGATG 5 cut(s) 285, 526, 555, 1136, 1253
BstHHI GCGC 1 cut(s) 776
BstKTI GATC 8 cut(s) 154, 265, 475, 505, 768, 903, 1066, 1235
BstMAI GTCTC 5 cut(s) 204, 444, 502, 635, 917
BstMBI GATC 8 cut(s) 151, 262, 472, 502, 765, 900, 1063, 1232
BstMWI GCNNNNNNNGC 4 cut(s) 38, 1176, 1191, 1228
BstNI CCWGG 1 cut(s) 518
BstNSI RCATGY 1 cut(s) 1078
BstPAI GACNNNNGTC 1 cut(s) 161
BstSCI CCNGG 3 cut(s) 307, 308, 516
BstSFI CTRYAG 1 cut(s) 180
BstSLI GKGCMC 1 cut(s) 108
BstV1I GCAGC 5 cut(s) 82, 268, 788, 1114, 1215
BstXI CCANNNNNNTGG 1 cut(s) 292
BsuRI GGCC 3 cut(s) 635, 1208, 1273
BtgI CCRYGG 1 cut(s) 630
BtrI CACGTC 1 cut(s) 512
BtsCI GGATG 5 cut(s) 285, 526, 555, 1136, 1253
BtsIMutI CAGTG 3 cut(s) 41, 615, 1155
Cac8I GCNNGC 1 cut(s) 1196
CfoI GCGC 1 cut(s) 776
Cfr13I GGNCC 1 cut(s) 1206
Cfr9I CCCGGG 1 cut(s) 308
Csp6I GTAC 1 cut(s) 237
CviAII CATG 7 cut(s) 272, 538, 631, 749, 761, 845, 1075
CviQI GTAC 1 cut(s) 237
DdeI CTNAG 4 cut(s) 206, 506, 618, 702
DpnI GATC 8 cut(s) 153, 264, 474, 504, 767, 902, 1065, 1234
DpnII GATC 8 cut(s) 151, 262, 472, 502, 765, 900, 1063, 1232
EaeI YGGCCR 1 cut(s) 633
Eam1104I CTCTTC 2 cut(s) 441, 488
EarI CTCTTC 2 cut(s) 441, 488
Ecl136II GAGCTC 1 cut(s) 622
Eco130I CCWWGG 4 cut(s) 370, 630, 849, 1223
Eco147I AGGCCT 1 cut(s) 1273
Eco24I GRGCYC 2 cut(s) 144, 624
Eco32I GATATC 1 cut(s) 679
Eco53kI GAGCTC 1 cut(s) 622
Eco72I CACGTG 1 cut(s) 365
Eco88I CYCGRG 1 cut(s) 308
EcoICRI GAGCTC 1 cut(s) 622
EcoRII CCWGG 1 cut(s) 516
EcoRV GATATC 1 cut(s) 679
EcoT14I CCWWGG 4 cut(s) 370, 630, 849, 1223
EcoT38I GRGCYC 2 cut(s) 144, 624
ErhI CCWWGG 4 cut(s) 370, 630, 849, 1223
Esp3I CGTCTC 2 cut(s) 502, 635
FaeI CATG 7 cut(s) 275, 541, 634, 752, 764, 848, 1078
FalI AAGNNNNNCTT 2 cut(s) 1163, 1195
FatI CATG 7 cut(s) 271, 537, 630, 748, 760, 844, 1074
FauI CCCGC 1 cut(s) 910
FbaI TGATCA 1 cut(s) 765
FblI GTMKAC 1 cut(s) 183
Fnu4HI GCNGC 5 cut(s) 96, 282, 777, 1103, 1229
FokI GGATG 5 cut(s) 272, 533, 562, 1123, 1240
FriOI GRGCYC 2 cut(s) 144, 624
Fsp4HI GCNGC 5 cut(s) 96, 282, 777, 1103, 1229
FspBI CTAG 6 cut(s) 137, 443, 873, 1041, 1121, 1224
FspI TGCGCA 1 cut(s) 775
GlaI GCGC 1 cut(s) 775
GluI GCNGC 5 cut(s) 96, 282, 777, 1103, 1229
GsuI CTGGAG 1 cut(s) 578
HaeIII GGCC 3 cut(s) 635, 1208, 1273
HapII CCGG 3 cut(s) 194, 309, 420
HhaI GCGC 1 cut(s) 776
Hin1II CATG 7 cut(s) 275, 541, 634, 752, 764, 848, 1078
Hin6I GCGC 1 cut(s) 774
HinP1I GCGC 1 cut(s) 774
HindIII AAGCTT 1 cut(s) 857
HinfI GANTC 6 cut(s) 247, 524, 604, 976, 1144, 1153
HpaII CCGG 3 cut(s) 194, 309, 420
HphI GGTGA 4 cut(s) 601, 724, 1064, 1233
Hpy166II GTNNAC 4 cut(s) 106, 184, 203, 592
Hpy188I TCNGA 5 cut(s) 156, 477, 507, 1015, 1028
Hpy188III TCNNGA 8 cut(s) 62, 194, 443, 682, 818, 890, 904, 1157
Hpy8I GTNNAC 4 cut(s) 106, 184, 203, 592
Hpy99I CGWCG 2 cut(s) 167, 641
HpyCH4III ACNGT 4 cut(s) 45, 181, 256, 646
HpyCH4IV ACGT 3 cut(s) 199, 364, 511
HpyCH4V TGCA 4 cut(s) 98, 106, 362, 1078
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 1176, 1191, 1228
HpyF3I CTNAG 4 cut(s) 206, 506, 618, 702
HpySE526I ACGT 3 cut(s) 199, 364, 511
Hsp92II CATG 7 cut(s) 275, 541, 634, 752, 764, 848, 1078
HspAI GCGC 1 cut(s) 774
Kpn2I TCCGGA 1 cut(s) 193
Ksp22I TGATCA 1 cut(s) 765
Kzo9I GATC 8 cut(s) 151, 262, 472, 502, 765, 900, 1063, 1232
LguI GCTCTTC 1 cut(s) 488
LmnI GCTCC 3 cut(s) 313, 559, 711
Lsp1109I GCAGC 5 cut(s) 82, 268, 788, 1114, 1215
LweI GCATC 4 cut(s) 19, 885, 1145, 1259
MaeI CTAG 6 cut(s) 137, 443, 873, 1041, 1121, 1224
MaeII ACGT 3 cut(s) 199, 364, 511
MaeIII GTNAC 4 cut(s) 166, 512, 686, 730
MalI GATC 8 cut(s) 153, 264, 474, 504, 767, 902, 1065, 1234
MboI GATC 8 cut(s) 151, 262, 472, 502, 765, 900, 1063, 1232
MboII GAAGA 8 cut(s) 158, 161, 397, 458, 475, 736, 878, 1176
MfeI CAATTG 1 cut(s) 67
MhlI GDGCHC 5 cut(s) 89, 108, 144, 564, 624
MluCI AATT 5 cut(s) 67, 458, 658, 934, 1046
MlyI GAGTC 2 cut(s) 598, 970
MmeI TCCRAC 1 cut(s) 328
MnlI CCTC 6 cut(s) 24, 141, 471, 746, 966, 1116
MroI TCCGGA 1 cut(s) 193
MseI TTAA 7 cut(s) 117, 402, 453, 494, 579, 666, 1086
MslI CAYNNNNRTG 3 cut(s) 270, 290, 695
MspI CCGG 3 cut(s) 194, 309, 420
MspR9I CCNGG 3 cut(s) 309, 310, 518
MunI CAATTG 1 cut(s) 67
Mva1269I GAATGC 1 cut(s) 126
MvaI CCWGG 1 cut(s) 518
MwoI GCNNNNNNNGC 4 cut(s) 38, 1176, 1191, 1228
NciI CCSGG 2 cut(s) 309, 310
NcoI CCATGG 1 cut(s) 630
NdeII GATC 8 cut(s) 151, 262, 472, 502, 765, 900, 1063, 1232
NlaIII CATG 7 cut(s) 275, 541, 634, 752, 764, 848, 1078
NlaIV GGNNCC 1 cut(s) 1004
NmuCI GTSAC 3 cut(s) 512, 686, 730
NsbI TGCGCA 1 cut(s) 775
NspI RCATGY 1 cut(s) 1078
PceI AGGCCT 1 cut(s) 1273
PciSI GCTCTTC 1 cut(s) 488
PctI GAATGC 1 cut(s) 126
PfeI GAWTC 4 cut(s) 247, 524, 1144, 1153
PkrI GCNGC 5 cut(s) 97, 283, 778, 1104, 1230
PleI GAGTC 2 cut(s) 598, 970
PmaCI CACGTG 1 cut(s) 365
PmlI CACGTG 1 cut(s) 365
PpsI GAGTC 2 cut(s) 598, 970
Ppu21I YACGTR 1 cut(s) 365
PshAI GACNNNNGTC 1 cut(s) 161
PshBI ATTAAT 1 cut(s) 402
Psp124BI GAGCTC 1 cut(s) 624
Psp6I CCWGG 1 cut(s) 516
PspCI CACGTG 1 cut(s) 365
PspGI CCWGG 1 cut(s) 516
PspN4I GGNNCC 1 cut(s) 1004
PspPI GGNCC 1 cut(s) 1206
RsaI GTAC 1 cut(s) 238
RsaNI GTAC 1 cut(s) 237
RseI CAYNNNNRTG 3 cut(s) 270, 290, 695
SacI GAGCTC 1 cut(s) 624
SapI GCTCTTC 1 cut(s) 488
SaqAI TTAA 7 cut(s) 117, 402, 453, 494, 579, 666, 1086
SatI GCNGC 5 cut(s) 96, 282, 777, 1103, 1229
Sau3AI GATC 8 cut(s) 151, 262, 472, 502, 765, 900, 1063, 1232
Sau96I GGNCC 1 cut(s) 1206
SchI GAGTC 2 cut(s) 598, 970
ScrFI CCNGG 3 cut(s) 309, 310, 518
SduI GDGCHC 5 cut(s) 89, 108, 144, 564, 624
SfaNI GCATC 4 cut(s) 19, 885, 1145, 1259
SfcI CTRYAG 1 cut(s) 180
SmaI CCCGGG 1 cut(s) 310
SmiMI CAYNNNNRTG 3 cut(s) 270, 290, 695
SmlI CTYRAG 3 cut(s) 737, 805, 1180
SmoI CTYRAG 3 cut(s) 737, 805, 1180
SpeI ACTAGT 1 cut(s) 1120
Sse9I AATT 5 cut(s) 67, 458, 658, 934, 1046
SseBI AGGCCT 1 cut(s) 1273
SsiI CCGC 2 cut(s) 757, 917
SspMI CTAG 6 cut(s) 137, 443, 873, 1041, 1121, 1224
SstI GAGCTC 1 cut(s) 624
StuI AGGCCT 1 cut(s) 1273
StyD4I CCNGG 3 cut(s) 307, 308, 516
StyI CCWWGG 4 cut(s) 370, 630, 849, 1223
TaaI ACNGT 4 cut(s) 45, 181, 256, 646
TaiI ACGT 3 cut(s) 202, 367, 514
TaqI TCGA 3 cut(s) 343, 903, 1071
TasI AATT 5 cut(s) 67, 458, 658, 934, 1046
TatI WGTACW 1 cut(s) 236
TfiI GAWTC 4 cut(s) 247, 524, 1144, 1153
Tru1I TTAA 7 cut(s) 117, 402, 453, 494, 579, 666, 1086
Tru9I TTAA 7 cut(s) 117, 402, 453, 494, 579, 666, 1086
TscAI CASTG 3 cut(s) 48, 622, 1155
TseFI GTSAC 3 cut(s) 512, 686, 730
TseI GCWGC 5 cut(s) 95, 281, 776, 1102, 1228
Tsp45I GTSAC 3 cut(s) 512, 686, 730
TspDTI ATGAA 4 cut(s) 537, 875, 978, 1035
TspGWI ACGGA 2 cut(s) 278, 707
TspMI CCCGGG 1 cut(s) 308
TspRI CASTG 3 cut(s) 48, 622, 1155
VneI GTGCAC 1 cut(s) 104
VspI ATTAAT 1 cut(s) 402
XapI RAATTY 3 cut(s) 458, 934, 1046
XbaI TCTAGA 1 cut(s) 442
XceI RCATGY 1 cut(s) 1078
XcmI CCANNNNNNNNNTGG 1 cut(s) 97
XmaI CCCGGG 1 cut(s) 308
XmaJI CCTAGG 1 cut(s) 1223
XmiI GTMKAC 1 cut(s) 183
XspI CTAG 6 cut(s) 137, 443, 873, 1041, 1121, 1224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.