Rh5AG321000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000612
Physical Location & Seq
Reverse (-)
47653051 .. 47654367
1317 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG321000.1

Sequence Viewer

Length: 1224 bp
ATGGCTTCCTCTTCCTCTTCTTTGTCCCCATTGAAAGTCCGAATCACCAAAGAACAGTTCTACTCTTTCCACAACATTGACCGCAAGCTCTTCACCCGTCTTACATTGCATCTAGGCCGTGACCCGGGCGAGTCTGCTCAGGTTATGGCCTTCTGGATGTGGCTCGAGCACGGTGGTAAGGTCACCCACTTCATTCACAAAGCCCTTAACACTCTCCCCAACACCCTCCTCCACATCATGGCCGACGAGTCATGCATGGTCCTCAATGTCATTCAAAACGATGAATTTCCGATGGTCTTGGAATCAGATATCATTCCTCACGATATTCCCGTTCTCCAAGGAATGACCAAAAGCGGCGTCACCCTCAGATTCTTCCATAAAAACCGTCTCAGCATCATCCGAGGACTTACCTTGTTTTTCAATGACGTGTGCTTGAGAGCCTTTGAGGACTTGTACATTACAGCCGCTCACTGCCAAAACAAGACTATAGATCCTATATCCACCGGAATAGGGTTACACCCAGAGCCGCAAAATTATGCAAGGAGGATGGTTCTAGTCAATAAGTACTACAATCCATTTCTCATTGGAGCTGCGACTTTTGACGCTCCTATGGAAACCATAGAACCTCTTCCTCCGCACCCCATGGATGGGGCTGTTGTTAACAGTAATAGTAGTGTTGATCCACTAATATGGGACCCTCGTGTGGCGGCTAAGGCGGTGTCTGCTCAGTCCCCTTGGGAGAATTTGCACCATGGATTTGTTGATCCCTATGATCTTAGCGCTCAGCGCGATTTCTTGAATAATGAAATGGCGGATATGTTGAGTCGTTTGCATTTGCATGACGATGATGGTGACGGTGGTGATGTAGGCGGTGGTGTTCGGGGGGATCAAGTCGAGGAAGAAGTGTCTGCAGATGATAGGACTATTTTCTTGACATTTTCTAAGGGGTATCCCATTTCTGAAAAGGAAGTGAGAGAGTTCTTTACCAGGAAATATGGGGAATTTTTTGATGCTATCCATATGCAAGAAGTACAAGTAGCGGATCAGCAGCCTTTATACGCCCGCCTTGTGGTTCGTTCCGCTTCTTTTATTCCAGTGGTGCTCGAGGGACAAAGCAAGGCCAAATTTTCTATCAATGGAAAACATGTTTGGGCAAGAAAGTACGTGAAAAAGAATATTGTGATAGGAGAACAAAGTTCACCAGAGGGTGTTTTAGCTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

407

Amino Acids

45.81

Weight (kDa)

5.85

Isoelectric Point (pI)

42.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000612)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G49290 AT5G13620
fragaria_vesca FvH4_1g08631 FvH4_2g11491 FvH4_3g26240 FvH4_7g20310 FvH4_7g20310 FvH4_7g20311
malus_domestica MD02G1091200.v1.1 MD07G1180400.v1.1 MD15G1217400.v1.1
prunus_persica Prupe.2G219300_v2.0.a1 Prupe.2G219700_v2.0.a1 Prupe.7G199100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0364241 RchiOBHm_Chr1g0364261 RchiOBHm_Chr2g0094911 RchiOBHm_Chr5g0048831 RchiOBHm_Chr5g0048891 RchiOBHm_Chr5g0048921 RchiOBHm_Chr6g0270221
rosa_laevigata RLG00000013804 RLG00000016530 RLG00000027499 RLG00000027502 RLG00000027503 RLG00000034558
rosa_multiflora Rmu_co8509593.1_g000001 Rmu_sc0002138.1_g000006 Rmu_sc0003628.1_g000024 Rmu_sc0006611.1_g000002 Rmu_sc0011253.1_g000002 Rmu_sc0011664.1_g000001 Rmu_sc0023830.1_g000002 Rmu_sc0023830.1_g000003
rosa_roxburghii Rroxscaffold_1G00033000 Rroxscaffold_2G00146780 Rroxscaffold_4G00292480 Rroxscaffold_4G00292520 Rroxscaffold_4G00292540 Rroxscaffold_7G00198040
rosa_rugosa Rorug01G0315200 Rorug01G0315300.1 Rorug02G0048800 Rorug05G0241300 Rorug06G0053800
rosa_samantha Rh1AG322400 Rh1AG322500 Rh1BG285300 Rh1BG285400 Rh1CG301700 Rh1CG301900 Rh1DG316700 Rh1DG316800 Rh2AG095400 Rh2BG096400 Rh2CG098400 Rh2DG095100 Rh5AG321000 Rh5AG321300 Rh5BG331300 Rh5BG331400 Rh5BG331500 Rh5CG356900 Rh5DG342800 Rh5DG342900 Rh5DG343100 Rh5DG343300 Rh6AG172300 Rh6BG176600 Rh6CG172500 Rh6DG163800
rosa_wichuraiana Rw1G028560 Rw1G028570 Rw2G007180 Rw5G030080 Rw5G030110 Rw5G030290 Rw5G030320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 238
AccBSI CCGCTC 1 cut(s) 467
AccII CGCG 1 cut(s) 789
AclWI GGATC 5 cut(s) 485, 674, 758, 894, 1050
AcoI YGGCCR 1 cut(s) 240
AcsI RAATTY 4 cut(s) 284, 742, 1001, 1124
AcyI GRCGYC 1 cut(s) 357
AfaI GTAC 4 cut(s) 455, 566, 1032, 1163
AfeI AGCGCT 1 cut(s) 781
AfiI CCNNNNNNNGG 7 cut(s) 124, 238, 510, 647, 648, 703, 1069
AflIII ACRYGT 2 cut(s) 426, 1144
AgsI TTSAA 4 cut(s) 34, 275, 421, 799
AjiI CACGTC 1 cut(s) 427
AjnI CCWGG 1 cut(s) 986
AjuI GAANNNNNNNTTGG 4 cut(s) 41, 73, 1132, 1164
AluBI AGCT 3 cut(s) 88, 590, 1217
AluI AGCT 3 cut(s) 88, 590, 1217
Alw21I GWGCWC 2 cut(s) 171, 1104
Alw26I GTCTC 1 cut(s) 392
AlwI GGATC 5 cut(s) 485, 674, 758, 894, 1050
Ama87I CYCGRG 3 cut(s) 124, 164, 1103
Aor51HI AGCGCT 1 cut(s) 781
AoxI GGCC 4 cut(s) 115, 147, 240, 1119
ApeKI GCWGC 2 cut(s) 590, 1048
ApoI RAATTY 4 cut(s) 284, 742, 1001, 1124
ArsI GACNNNNNNTTYG 2 cut(s) 342, 374
Asp700I GAANNNNTTC 1 cut(s) 627
AspLEI GCGC 2 cut(s) 782, 789
AspS9I GGNCC 2 cut(s) 259, 694
AsuC2I CCSGG 2 cut(s) 125, 126
AsuHPI GGTGA 7 cut(s) 37, 85, 175, 352, 863, 872, 1191
AvaI CYCGRG 3 cut(s) 124, 164, 1103
AvaII GGWCC 2 cut(s) 259, 694
BauI CACGAG 1 cut(s) 699
Bbv12I GWGCWC 2 cut(s) 171, 1104
BbvI GCAGC 2 cut(s) 577, 1060
BccI CCATC 4 cut(s) 286, 541, 641, 842
BceAI ACGGC 1 cut(s) 102
BciT130I CCWGG 1 cut(s) 988
BciVI GTATCC 1 cut(s) 960
BcnI CCSGG 2 cut(s) 125, 126
BcoDI GTCTC 1 cut(s) 392
BfaI CTAG 2 cut(s) 113, 554
BfmI CTRYAG 2 cut(s) 486, 909
BfoI RGCGCY 1 cut(s) 783
BfuI GTATCC 1 cut(s) 960
BisI GCNGC 6 cut(s) 355, 465, 527, 591, 708, 1049
BlpI GCTNAGC 1 cut(s) 783
BlsI GCNGC 6 cut(s) 356, 466, 528, 592, 709, 1050
BmcAI AGTACT 1 cut(s) 566
Bme1390I CCNGG 3 cut(s) 125, 126, 988
Bme18I GGWCC 2 cut(s) 259, 694
BmeT110I CYCGRG 3 cut(s) 124, 164, 1103
BmgBI CACGTC 1 cut(s) 427
BmgT120I GGNCC 2 cut(s) 259, 694
BmiI GGNNCC 2 cut(s) 695, 696
BmrFI CCNGG 3 cut(s) 125, 126, 988
BmsI GCATC 3 cut(s) 118, 402, 1000
Bpu10I CCTNAGC 2 cut(s) 138, 711
Bpu1102I GCTNAGC 1 cut(s) 783
BpuEI CTTGAG 1 cut(s) 454
BpuMI CCSGG 2 cut(s) 125, 126
BsaAI YACGTR 1 cut(s) 1165
BsaHI GRCGYC 1 cut(s) 357
BsaJI CCNNGG 6 cut(s) 124, 337, 400, 642, 734, 751
BsaWI WCCGGW 1 cut(s) 503
Bsc4I CCNNNNNNNGG 7 cut(s) 124, 238, 510, 647, 648, 703, 1069
Bse1I ACTGG 1 cut(s) 1094
Bse3DI GCAATG 1 cut(s) 104
BseBI CCWGG 1 cut(s) 988
BseDI CCNNGG 6 cut(s) 124, 337, 400, 642, 734, 751
BseGI GGATG 4 cut(s) 162, 396, 552, 652
BseLI CCNNNNNNNGG 7 cut(s) 124, 238, 510, 647, 648, 703, 1069
BseMI GCAATG 1 cut(s) 104
BseMII CTCAG 5 cut(s) 152, 379, 403, 740, 797
BseNI ACTGG 1 cut(s) 1094
BseRI GAGGAG 1 cut(s) 218
BseXI GCAGC 2 cut(s) 577, 1060
Bsh1236I CGCG 1 cut(s) 789
BshFI GGCC 4 cut(s) 117, 149, 242, 1121
BsiHKAI GWGCWC 2 cut(s) 171, 1104
BsiHKCI CYCGRG 3 cut(s) 124, 164, 1103
BsiSI CCGG 2 cut(s) 125, 504
BslFI GGGAC 4 cut(s) 10, 707, 715, 1122
BslI CCNNNNNNNGG 7 cut(s) 124, 238, 510, 647, 648, 703, 1069
BsmAI GTCTC 1 cut(s) 392
BsmBI CGTCTC 1 cut(s) 392
BsmFI GGGAC 4 cut(s) 10, 707, 715, 1122
BsnI GGCC 4 cut(s) 117, 149, 242, 1121
BsoBI CYCGRG 3 cut(s) 124, 164, 1103
Bsp1286I GDGCHC 2 cut(s) 171, 1104
Bsp1407I TGTACA 1 cut(s) 453
Bsp143I GATC 6 cut(s) 490, 679, 763, 772, 886, 1042
Bsp1720I GCTNAGC 1 cut(s) 783
Bsp19I CCATGG 2 cut(s) 642, 751
BspANI GGCC 4 cut(s) 117, 149, 242, 1121
BspCNI CTCAG 5 cut(s) 151, 378, 402, 739, 796
BspFNI CGCG 1 cut(s) 789
BspLI GGNNCC 2 cut(s) 695, 696
BspMAI CTGCAG 1 cut(s) 913
BspPI GGATC 5 cut(s) 485, 674, 758, 894, 1050
BspQI GCTCTTC 1 cut(s) 95
BsrBI CCGCTC 1 cut(s) 467
BsrDI GCAATG 1 cut(s) 104
BsrGI TGTACA 1 cut(s) 453
BsrI ACTGG 1 cut(s) 1094
BssECI CCNNGG 6 cut(s) 124, 337, 400, 642, 734, 751
BssMI GATC 6 cut(s) 490, 679, 763, 772, 886, 1042
BssNI GRCGYC 1 cut(s) 357
BssSI CACGAG 1 cut(s) 699
BssT1I CCWWGG 4 cut(s) 337, 642, 734, 751
Bst2BI CACGAG 1 cut(s) 699
Bst2UI CCWGG 1 cut(s) 988
Bst4CI ACNGT 5 cut(s) 57, 173, 386, 665, 857
Bst6I CTCTTC 4 cut(s) 16, 22, 95, 633
BstACI GRCGYC 1 cut(s) 357
BstAUI TGTACA 1 cut(s) 453
BstBAI YACGTR 1 cut(s) 1165
BstC8I GCNNGC 2 cut(s) 86, 1063
BstDEI CTNAG 8 cut(s) 138, 365, 389, 711, 726, 776, 783, 942
BstDSI CCRYGG 2 cut(s) 642, 751
BstEII GGTNACC 1 cut(s) 181
BstF5I GGATG 4 cut(s) 162, 396, 552, 652
BstFNI CGCG 1 cut(s) 789
BstH2I RGCGCY 1 cut(s) 783
BstHHI GCGC 2 cut(s) 782, 789
BstKTI GATC 6 cut(s) 493, 682, 766, 775, 889, 1045
BstMAI GTCTC 1 cut(s) 392
BstMBI GATC 6 cut(s) 490, 679, 763, 772, 886, 1042
BstMWI GCNNNNNNNGC 3 cut(s) 713, 722, 786
BstNI CCWGG 1 cut(s) 988
BstNSI RCATGY 1 cut(s) 1148
BstPI GGTNACC 1 cut(s) 181
BstSCI CCNGG 3 cut(s) 123, 124, 986
BstSFI CTRYAG 2 cut(s) 486, 909
BstUI CGCG 1 cut(s) 789
BstV1I GCAGC 2 cut(s) 577, 1060
BstX2I RGATCY 1 cut(s) 490
BstXI CCANNNNNNTGG 1 cut(s) 690
BstYI RGATCY 1 cut(s) 490
BsuI GTATCC 1 cut(s) 960
BsuRI GGCC 4 cut(s) 117, 149, 242, 1121
BtgI CCRYGG 2 cut(s) 642, 751
BtrI CACGTC 1 cut(s) 427
BtsCI GGATG 4 cut(s) 162, 396, 552, 652
BtsI GCAGTG 1 cut(s) 469
BtsIMutI CAGTG 2 cut(s) 469, 1101
Cac8I GCNNGC 2 cut(s) 86, 1063
CfoI GCGC 2 cut(s) 782, 789
Cfr13I GGNCC 2 cut(s) 259, 694
Cfr9I CCCGGG 1 cut(s) 124
CseI GACGC 2 cut(s) 346, 611
Csp6I GTAC 4 cut(s) 454, 565, 1031, 1162
CviAII CATG 7 cut(s) 238, 252, 256, 643, 752, 839, 1145
CviQI GTAC 4 cut(s) 454, 565, 1031, 1162
DdeI CTNAG 8 cut(s) 138, 365, 389, 711, 726, 776, 783, 942
DpnI GATC 6 cut(s) 492, 681, 765, 774, 888, 1044
DpnII GATC 6 cut(s) 490, 679, 763, 772, 886, 1042
EaeI YGGCCR 1 cut(s) 240
Eam1104I CTCTTC 4 cut(s) 16, 22, 95, 633
EarI CTCTTC 4 cut(s) 16, 22, 95, 633
EciI GGCGGA 1 cut(s) 827
Eco130I CCWWGG 4 cut(s) 337, 642, 734, 751
Eco32I GATATC 1 cut(s) 310
Eco47I GGWCC 2 cut(s) 259, 694
Eco47III AGCGCT 1 cut(s) 781
Eco88I CYCGRG 3 cut(s) 124, 164, 1103
Eco91I GGTNACC 1 cut(s) 181
EcoO109I RGGNCCY 1 cut(s) 694
EcoO65I GGTNACC 1 cut(s) 181
EcoRII CCWGG 1 cut(s) 986
EcoRV GATATC 1 cut(s) 310
EcoT14I CCWWGG 4 cut(s) 337, 642, 734, 751
EcoT22I ATGCAT 1 cut(s) 257
ErhI CCWWGG 4 cut(s) 337, 642, 734, 751
Esp3I CGTCTC 1 cut(s) 392
FaeI CATG 7 cut(s) 241, 255, 259, 646, 755, 842, 1148
FaqI GGGAC 4 cut(s) 10, 707, 715, 1122
FatI CATG 7 cut(s) 237, 251, 255, 642, 751, 838, 1144
FauI CCCGC 1 cut(s) 1070
FauNDI CATATG 1 cut(s) 1020
Fnu4HI GCNGC 6 cut(s) 355, 465, 527, 591, 708, 1049
FokI GGATG 4 cut(s) 169, 383, 559, 659
Fsp4HI GCNGC 6 cut(s) 355, 465, 527, 591, 708, 1049
FspBI CTAG 2 cut(s) 113, 554
GlaI GCGC 2 cut(s) 781, 788
GluI GCNGC 6 cut(s) 355, 465, 527, 591, 708, 1049
HaeII RGCGCY 1 cut(s) 783
HaeIII GGCC 4 cut(s) 117, 149, 242, 1121
HapII CCGG 2 cut(s) 125, 504
HgaI GACGC 2 cut(s) 346, 611
HhaI GCGC 2 cut(s) 782, 789
Hin1I GRCGYC 1 cut(s) 357
Hin1II CATG 7 cut(s) 241, 255, 259, 646, 755, 842, 1148
Hin6I GCGC 2 cut(s) 780, 787
HinP1I GCGC 2 cut(s) 780, 787
HincII GTYRAC 1 cut(s) 661
HindII GTYRAC 1 cut(s) 661
HinfI GANTC 6 cut(s) 42, 131, 248, 302, 369, 823
HpaI GTTAAC 1 cut(s) 661
HpaII CCGG 2 cut(s) 125, 504
HphI GGTGA 7 cut(s) 37, 85, 175, 352, 863, 872, 1191
Hpy166II GTNNAC 2 cut(s) 661, 1199
Hpy188I TCNGA 6 cut(s) 41, 291, 307, 368, 401, 961
Hpy188III TCNNGA 4 cut(s) 154, 320, 796, 931
Hpy8I GTNNAC 2 cut(s) 661, 1199
Hpy99I CGWCG 1 cut(s) 248
HpyAV CCTTC 1 cut(s) 160
HpyCH4III ACNGT 5 cut(s) 57, 173, 386, 665, 857
HpyCH4IV ACGT 2 cut(s) 426, 1164
HpyCH4V TGCA 8 cut(s) 109, 255, 539, 748, 832, 838, 911, 1024
HpyF10VI GCNNNNNNNGC 3 cut(s) 713, 722, 786
HpyF3I CTNAG 8 cut(s) 138, 365, 389, 711, 726, 776, 783, 942
HpySE526I ACGT 2 cut(s) 426, 1164
Hsp92I GRCGYC 1 cut(s) 357
Hsp92II CATG 7 cut(s) 241, 255, 259, 646, 755, 842, 1148
HspAI GCGC 2 cut(s) 780, 787
KflI GGGWCCC 1 cut(s) 694
KspAI GTTAAC 1 cut(s) 661
Kzo9I GATC 6 cut(s) 490, 679, 763, 772, 886, 1042
LguI GCTCTTC 1 cut(s) 95
LmnI GCTCC 2 cut(s) 587, 610
LpnPI CCDG 9 cut(s) 125, 138, 139, 517, 534, 973, 1000, 1107, 1215
Lsp1109I GCAGC 2 cut(s) 577, 1060
LweI GCATC 3 cut(s) 118, 402, 1000
MaeI CTAG 2 cut(s) 113, 554
MaeII ACGT 2 cut(s) 426, 1164
MaeIII GTNAC 5 cut(s) 119, 181, 358, 513, 851
MalI GATC 6 cut(s) 492, 681, 765, 774, 888, 1044
MbiI CCGCTC 1 cut(s) 467
MboI GATC 6 cut(s) 490, 679, 763, 772, 886, 1042
MboII GAAGA 6 cut(s) 3, 9, 82, 364, 620, 911
MflI RGATCY 1 cut(s) 490
MhlI GDGCHC 2 cut(s) 171, 1104
MluCI AATT 5 cut(s) 284, 532, 742, 1001, 1124
MlyI GAGTC 3 cut(s) 140, 257, 832
Mph1103I ATGCAT 1 cut(s) 257
MroXI GAANNNNTTC 1 cut(s) 627
MseI TTAA 2 cut(s) 207, 660
MslI CAYNNNNRTG 3 cut(s) 688, 837, 843
MspI CCGG 2 cut(s) 125, 504
MspR9I CCNGG 3 cut(s) 125, 126, 988
MvaI CCWGG 1 cut(s) 988
MvnI CGCG 1 cut(s) 789
MwoI GCNNNNNNNGC 3 cut(s) 713, 722, 786
NciI CCSGG 2 cut(s) 125, 126
NcoI CCATGG 2 cut(s) 642, 751
NdeI CATATG 1 cut(s) 1020
NdeII GATC 6 cut(s) 490, 679, 763, 772, 886, 1042
NlaIII CATG 7 cut(s) 241, 255, 259, 646, 755, 842, 1148
NlaIV GGNNCC 2 cut(s) 695, 696
NmuCI GTSAC 4 cut(s) 119, 181, 358, 851
NsiI ATGCAT 1 cut(s) 257
NspI RCATGY 1 cut(s) 1148
PaeR7I CTCGAG 2 cut(s) 164, 1103
PciI ACATGT 1 cut(s) 1144
PciSI GCTCTTC 1 cut(s) 95
PcsI WCGNNNNNNNCGW 1 cut(s) 327
PdmI GAANNNNTTC 1 cut(s) 627
PfeI GAWTC 3 cut(s) 42, 302, 369
PflMI CCANNNNNTGG 1 cut(s) 238
PkrI GCNGC 6 cut(s) 356, 466, 528, 592, 709, 1050
PleI GAGTC 3 cut(s) 139, 256, 831
PpsI GAGTC 3 cut(s) 139, 256, 831
Ppu21I YACGTR 1 cut(s) 1165
PpuMI RGGWCCY 1 cut(s) 694
PscI ACATGT 1 cut(s) 1144
Psp5II RGGWCCY 1 cut(s) 694
Psp6I CCWGG 1 cut(s) 986
PspEI GGTNACC 1 cut(s) 181
PspGI CCWGG 1 cut(s) 986
PspN4I GGNNCC 2 cut(s) 695, 696
PspPI GGNCC 2 cut(s) 259, 694
PspPPI RGGWCCY 1 cut(s) 694
PspXI VCTCGAGB 2 cut(s) 164, 1103
PstI CTGCAG 1 cut(s) 913
PsuI RGATCY 1 cut(s) 490
RsaI GTAC 4 cut(s) 455, 566, 1032, 1163
RsaNI GTAC 4 cut(s) 454, 565, 1031, 1162
RseI CAYNNNNRTG 3 cut(s) 688, 837, 843
SapI GCTCTTC 1 cut(s) 95
SaqAI TTAA 2 cut(s) 207, 660
SatI GCNGC 6 cut(s) 355, 465, 527, 591, 708, 1049
Sau3AI GATC 6 cut(s) 490, 679, 763, 772, 886, 1042
Sau96I GGNCC 2 cut(s) 259, 694
ScaI AGTACT 1 cut(s) 566
SchI GAGTC 3 cut(s) 140, 257, 832
ScrFI CCNGG 3 cut(s) 125, 126, 988
SduI GDGCHC 2 cut(s) 171, 1104
SetI ASST 9 cut(s) 90, 144, 183, 413, 429, 592, 628, 1167, 1219
SfaNI GCATC 3 cut(s) 118, 402, 1000
SfcI CTRYAG 2 cut(s) 486, 909
Sfr274I CTCGAG 2 cut(s) 164, 1103
SinI GGWCC 2 cut(s) 259, 694
SlaI CTCGAG 2 cut(s) 164, 1103
SmaI CCCGGG 1 cut(s) 126
SmiMI CAYNNNNRTG 3 cut(s) 688, 837, 843
SmlI CTYRAG 3 cut(s) 164, 433, 1103
SmoI CTYRAG 3 cut(s) 164, 433, 1103
Sse9I AATT 5 cut(s) 284, 532, 742, 1001, 1124
SspI AATATT 1 cut(s) 1177
SspMI CTAG 2 cut(s) 113, 554
StyD4I CCNGG 3 cut(s) 123, 124, 986
StyI CCWWGG 4 cut(s) 337, 642, 734, 751
TaaI ACNGT 5 cut(s) 57, 173, 386, 665, 857
TaiI ACGT 2 cut(s) 429, 1167
TaqI TCGA 3 cut(s) 165, 894, 1104
TasI AATT 5 cut(s) 284, 532, 742, 1001, 1124
TatI WGTACW 3 cut(s) 453, 564, 1030
TauI GCSGC 4 cut(s) 357, 467, 529, 710
TfiI GAWTC 3 cut(s) 42, 302, 369
Tru1I TTAA 2 cut(s) 207, 660
Tru9I TTAA 2 cut(s) 207, 660
TscAI CASTG 2 cut(s) 476, 1101
TseFI GTSAC 4 cut(s) 119, 181, 358, 851
TseI GCWGC 2 cut(s) 590, 1048
Tsp45I GTSAC 4 cut(s) 119, 181, 358, 851
TspDTI ATGAA 3 cut(s) 181, 297, 819
TspMI CCCGGG 1 cut(s) 124
TspRI CASTG 2 cut(s) 476, 1101
Van91I CCANNNNNTGG 1 cut(s) 238
VpaK11BI GGWCC 2 cut(s) 259, 694
XapI RAATTY 4 cut(s) 284, 742, 1001, 1124
XceI RCATGY 1 cut(s) 1148
XhoI CTCGAG 2 cut(s) 164, 1103
XmaI CCCGGG 1 cut(s) 124
XmnI GAANNNNTTC 1 cut(s) 627
XspI CTAG 2 cut(s) 113, 554
ZrmI AGTACT 1 cut(s) 566
Zsp2I ATGCAT 1 cut(s) 257
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.