Rh5BG331500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000612
Physical Location & Seq
Reverse (-)
46060279 .. 46061596
1318 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG331500.1

Sequence Viewer

Length: 1233 bp
ATGGCTTCCTCTTCCTCGTCTTTGTCCCCATTGAAAGTCCGAATCACCAAAGAACAGTTCTACTCTTTCCACAACATTGACCGCAAGCTCTTCACCCGTCTTACATTGCATCTAGGCCGTGACCCGGGCGATTCTGCTCAGATTATGGCCTTTTGGATGTGGCTCGAGCACGGTGGTAAGGTCACCCACTTCATTCACAAAGCCCTTAACACTCTCCCCAACACCCTCCTCCACATCATGGCCGACGAGTCATGCATGGTCCTCAATGTCATTCAAAACGATGAATTTCCGATGGTCTTGGAATCAGATATCATTCCTCACGATATTCCCATTCTCCAAGGAATGACAAAAAGCGGCGTCACCCTCAGATTCTTCCATAAAAACCGCCTCAGCATTATCCGAGGACTTACCTTGTTTTTCAATGACGTGTGCTTGAGAGCCTTTGAGGACTTGTACATTACAGCTGCTCACTGCCAAAACAAGACTATAGATCCTATATCCACCGGAATAGGGTTACACCCAGAGCCGCAAAATTATGCAAGGAGGACGGTTCTAGTCAATAAGTACTACAATCCATTTCTCATTGGAGCTGCGACTTTTGACGCGCCTATGGAAACCATAGAACCTCTTCCTCCGCACCCCATGGATGGGCCTGTTGTTAACAGTAATAGTAGTGTTGATCCACTAATATGGGACCCTCGTGTGGCGGCTAAGGCGGTGTCTGTGGGGTTTGCTCAGACTCCTTCGGAGAATTTGCGCCATGGTTTTGTTGATCCCTGTGATCTTAGCGCTCAGCGCGATTTCTTGAATAATGAAATGGCGGATATGTTGAGCCGTTTGCATTTGCATGACGATGATGGTGATGGTGGTGAAATAGGCGGTGGTGTTCGGGGGGATCAAGTCGAGGAAGAAGTGTCTACAGATGATAGGACTATTTTCTTGACATTTTCTAAGGGGTATCCCATTTCTGAAAAGGAAGTGAGAGAGTTCTTTACCAGGAAATATGGGGAATTTTTTGATGCTATCCATATGCAAGAAGTACAAGCAGCAGATCAGCAGCCTTTATATGCCCGCCTTGTGGTTCGTTCTGCTTCTTTTATTCCAGTGGTGCTCGAGGGACAAAGCAAGGCCAAATTTTCTATCAACGGAAAACATGTTTGGGCAAGAAAGTACGTGAAAAAGAATATTGTGATAGGAGAACAAAGTTCACCAAAGGGTGTTTTAGCTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

410

Amino Acids

46.03

Weight (kDa)

6.06

Isoelectric Point (pI)

42.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000612)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G49290 AT5G13620
fragaria_vesca FvH4_1g08631 FvH4_2g11491 FvH4_3g26240 FvH4_7g20310 FvH4_7g20310 FvH4_7g20311
malus_domestica MD02G1091200.v1.1 MD07G1180400.v1.1 MD15G1217400.v1.1
prunus_persica Prupe.2G219300_v2.0.a1 Prupe.2G219700_v2.0.a1 Prupe.7G199100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0364241 RchiOBHm_Chr1g0364261 RchiOBHm_Chr2g0094911 RchiOBHm_Chr5g0048831 RchiOBHm_Chr5g0048891 RchiOBHm_Chr5g0048921 RchiOBHm_Chr6g0270221
rosa_laevigata RLG00000013804 RLG00000016530 RLG00000027499 RLG00000027502 RLG00000027503 RLG00000034558
rosa_multiflora Rmu_co8509593.1_g000001 Rmu_sc0002138.1_g000006 Rmu_sc0003628.1_g000024 Rmu_sc0006611.1_g000002 Rmu_sc0011253.1_g000002 Rmu_sc0011664.1_g000001 Rmu_sc0023830.1_g000002 Rmu_sc0023830.1_g000003
rosa_roxburghii Rroxscaffold_1G00033000 Rroxscaffold_2G00146780 Rroxscaffold_4G00292480 Rroxscaffold_4G00292520 Rroxscaffold_4G00292540 Rroxscaffold_7G00198040
rosa_rugosa Rorug01G0315200 Rorug01G0315300.1 Rorug02G0048800 Rorug05G0241300 Rorug06G0053800
rosa_samantha Rh1AG322400 Rh1AG322500 Rh1BG285300 Rh1BG285400 Rh1CG301700 Rh1CG301900 Rh1DG316700 Rh1DG316800 Rh2AG095400 Rh2BG096400 Rh2CG098400 Rh2DG095100 Rh5AG321000 Rh5AG321300 Rh5BG331300 Rh5BG331400 Rh5BG331500 Rh5CG356900 Rh5DG342800 Rh5DG342900 Rh5DG343100 Rh5DG343300 Rh6AG172300 Rh6BG176600 Rh6CG172500 Rh6DG163800
rosa_wichuraiana Rw1G028560 Rw1G028570 Rw2G007180 Rw5G030080 Rw5G030110 Rw5G030290 Rw5G030320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 238
AccI GTMKAC 1 cut(s) 917
AccII CGCG 2 cut(s) 605, 798
AclWI GGATC 4 cut(s) 485, 674, 767, 903
AcoI YGGCCR 1 cut(s) 240
AcsI RAATTY 4 cut(s) 284, 751, 1010, 1133
AcyI GRCGYC 1 cut(s) 357
AfaI GTAC 4 cut(s) 455, 566, 1041, 1172
AfeI AGCGCT 1 cut(s) 790
AfiI CCNNNNNNNGG 7 cut(s) 124, 238, 510, 647, 648, 703, 1078
AflIII ACRYGT 2 cut(s) 426, 1153
AgsI TTSAA 4 cut(s) 34, 275, 421, 808
AjiI CACGTC 1 cut(s) 427
AjnI CCWGG 1 cut(s) 995
AjuI GAANNNNNNNTTGG 4 cut(s) 41, 73, 1141, 1173
AluBI AGCT 4 cut(s) 88, 464, 590, 1226
AluI AGCT 4 cut(s) 88, 464, 590, 1226
Alw21I GWGCWC 2 cut(s) 171, 1113
AlwI GGATC 4 cut(s) 485, 674, 767, 903
Ama87I CYCGRG 3 cut(s) 124, 164, 1112
Aor51HI AGCGCT 1 cut(s) 790
AoxI GGCC 5 cut(s) 115, 147, 240, 650, 1128
ApeKI GCWGC 4 cut(s) 464, 590, 1046, 1057
ApoI RAATTY 4 cut(s) 284, 751, 1010, 1133
Asp700I GAANNNNTTC 1 cut(s) 627
AspLEI GCGC 4 cut(s) 607, 759, 791, 798
AspS9I GGNCC 3 cut(s) 259, 650, 694
AsuC2I CCSGG 2 cut(s) 125, 126
AsuHPI GGTGA 7 cut(s) 37, 85, 175, 352, 872, 881, 1200
AvaI CYCGRG 3 cut(s) 124, 164, 1112
AvaII GGWCC 2 cut(s) 259, 694
BauI CACGAG 1 cut(s) 699
Bbv12I GWGCWC 2 cut(s) 171, 1113
BbvCI CCTCAGC 1 cut(s) 389
BbvI GCAGC 4 cut(s) 451, 577, 1058, 1069
BccI CCATC 4 cut(s) 286, 641, 851, 857
BceAI ACGGC 2 cut(s) 102, 819
BciT130I CCWGG 1 cut(s) 997
BciVI GTATCC 1 cut(s) 969
BcnI CCSGG 2 cut(s) 125, 126
BfaI CTAG 2 cut(s) 113, 554
BfmI CTRYAG 2 cut(s) 486, 918
BfoI RGCGCY 1 cut(s) 792
BfuI GTATCC 1 cut(s) 969
BisI GCNGC 7 cut(s) 355, 465, 527, 591, 708, 1047, 1058
BlpI GCTNAGC 1 cut(s) 792
BlsI GCNGC 7 cut(s) 356, 466, 528, 592, 709, 1048, 1059
BmcAI AGTACT 1 cut(s) 566
Bme1390I CCNGG 3 cut(s) 125, 126, 997
Bme18I GGWCC 2 cut(s) 259, 694
BmeT110I CYCGRG 3 cut(s) 124, 164, 1112
BmgBI CACGTC 1 cut(s) 427
BmgT120I GGNCC 3 cut(s) 259, 650, 694
BmiI GGNNCC 2 cut(s) 695, 696
BmrFI CCNGG 3 cut(s) 125, 126, 997
BmsI GCATC 2 cut(s) 118, 1009
Bpu10I CCTNAGC 2 cut(s) 389, 711
Bpu1102I GCTNAGC 1 cut(s) 792
BpuEI CTTGAG 1 cut(s) 454
BpuMI CCSGG 2 cut(s) 125, 126
BsaAI YACGTR 1 cut(s) 1174
BsaHI GRCGYC 1 cut(s) 357
BsaJI CCNNGG 5 cut(s) 124, 337, 400, 642, 760
BsaWI WCCGGW 1 cut(s) 503
Bsc4I CCNNNNNNNGG 7 cut(s) 124, 238, 510, 647, 648, 703, 1078
Bse1I ACTGG 1 cut(s) 1103
Bse3DI GCAATG 1 cut(s) 104
BseBI CCWGG 1 cut(s) 997
BseDI CCNNGG 5 cut(s) 124, 337, 400, 642, 760
BseGI GGATG 2 cut(s) 162, 652
BseLI CCNNNNNNNGG 7 cut(s) 124, 238, 510, 647, 648, 703, 1078
BseMI GCAATG 1 cut(s) 104
BseMII CTCAG 5 cut(s) 152, 379, 403, 749, 806
BseNI ACTGG 1 cut(s) 1103
BseRI GAGGAG 1 cut(s) 218
BseXI GCAGC 4 cut(s) 451, 577, 1058, 1069
Bsh1236I CGCG 2 cut(s) 605, 798
BshFI GGCC 5 cut(s) 117, 149, 242, 652, 1130
BsiHKAI GWGCWC 2 cut(s) 171, 1113
BsiHKCI CYCGRG 3 cut(s) 124, 164, 1112
BsiSI CCGG 2 cut(s) 125, 504
BslFI GGGAC 3 cut(s) 10, 707, 1131
BslI CCNNNNNNNGG 7 cut(s) 124, 238, 510, 647, 648, 703, 1078
BsmFI GGGAC 3 cut(s) 10, 707, 1131
BsnI GGCC 5 cut(s) 117, 149, 242, 652, 1130
BsoBI CYCGRG 3 cut(s) 124, 164, 1112
Bsp1286I GDGCHC 2 cut(s) 171, 1113
Bsp1407I TGTACA 1 cut(s) 453
Bsp143I GATC 6 cut(s) 490, 679, 772, 781, 895, 1051
Bsp1720I GCTNAGC 1 cut(s) 792
Bsp19I CCATGG 2 cut(s) 642, 760
BspANI GGCC 5 cut(s) 117, 149, 242, 652, 1130
BspCNI CTCAG 5 cut(s) 151, 378, 402, 748, 805
BspFNI CGCG 2 cut(s) 605, 798
BspLI GGNNCC 2 cut(s) 695, 696
BspPI GGATC 4 cut(s) 485, 674, 767, 903
BspQI GCTCTTC 1 cut(s) 95
BsrDI GCAATG 1 cut(s) 104
BsrGI TGTACA 1 cut(s) 453
BsrI ACTGG 1 cut(s) 1103
BssECI CCNNGG 5 cut(s) 124, 337, 400, 642, 760
BssMI GATC 6 cut(s) 490, 679, 772, 781, 895, 1051
BssNI GRCGYC 1 cut(s) 357
BssSI CACGAG 1 cut(s) 699
BssT1I CCWWGG 3 cut(s) 337, 642, 760
Bst2BI CACGAG 1 cut(s) 699
Bst2UI CCWGG 1 cut(s) 997
Bst4CI ACNGT 4 cut(s) 57, 173, 550, 665
Bst6I CTCTTC 3 cut(s) 16, 95, 633
BstACI GRCGYC 1 cut(s) 357
BstAUI TGTACA 1 cut(s) 453
BstBAI YACGTR 1 cut(s) 1174
BstC8I GCNNGC 2 cut(s) 86, 1072
BstDEI CTNAG 8 cut(s) 138, 365, 389, 711, 735, 785, 792, 951
BstDSI CCRYGG 2 cut(s) 642, 760
BstEII GGTNACC 1 cut(s) 181
BstF5I GGATG 2 cut(s) 162, 652
BstFNI CGCG 2 cut(s) 605, 798
BstH2I RGCGCY 1 cut(s) 792
BstHHI GCGC 4 cut(s) 607, 759, 791, 798
BstKTI GATC 6 cut(s) 493, 682, 775, 784, 898, 1054
BstMBI GATC 6 cut(s) 490, 679, 772, 781, 895, 1051
BstMWI GCNNNNNNNGC 2 cut(s) 713, 795
BstNI CCWGG 1 cut(s) 997
BstNSI RCATGY 1 cut(s) 1157
BstPI GGTNACC 1 cut(s) 181
BstSCI CCNGG 3 cut(s) 123, 124, 995
BstSFI CTRYAG 2 cut(s) 486, 918
BstUI CGCG 2 cut(s) 605, 798
BstV1I GCAGC 4 cut(s) 451, 577, 1058, 1069
BstX2I RGATCY 1 cut(s) 490
BstXI CCANNNNNNTGG 1 cut(s) 690
BstYI RGATCY 1 cut(s) 490
BsuI GTATCC 1 cut(s) 969
BsuRI GGCC 5 cut(s) 117, 149, 242, 652, 1130
BtgI CCRYGG 2 cut(s) 642, 760
BtrI CACGTC 1 cut(s) 427
BtsCI GGATG 2 cut(s) 162, 652
BtsI GCAGTG 1 cut(s) 469
BtsIMutI CAGTG 2 cut(s) 469, 1110
Cac8I GCNNGC 2 cut(s) 86, 1072
CfoI GCGC 4 cut(s) 607, 759, 791, 798
Cfr13I GGNCC 3 cut(s) 259, 650, 694
Cfr9I CCCGGG 1 cut(s) 124
CseI GACGC 2 cut(s) 346, 611
Csp6I GTAC 4 cut(s) 454, 565, 1040, 1171
CviAII CATG 7 cut(s) 238, 252, 256, 643, 761, 848, 1154
CviQI GTAC 4 cut(s) 454, 565, 1040, 1171
DdeI CTNAG 8 cut(s) 138, 365, 389, 711, 735, 785, 792, 951
DpnI GATC 6 cut(s) 492, 681, 774, 783, 897, 1053
DpnII GATC 6 cut(s) 490, 679, 772, 781, 895, 1051
EaeI YGGCCR 1 cut(s) 240
Eam1104I CTCTTC 3 cut(s) 16, 95, 633
EarI CTCTTC 3 cut(s) 16, 95, 633
EciI GGCGGA 1 cut(s) 836
Eco130I CCWWGG 3 cut(s) 337, 642, 760
Eco32I GATATC 1 cut(s) 310
Eco47I GGWCC 2 cut(s) 259, 694
Eco47III AGCGCT 1 cut(s) 790
Eco88I CYCGRG 3 cut(s) 124, 164, 1112
Eco91I GGTNACC 1 cut(s) 181
EcoO109I RGGNCCY 1 cut(s) 694
EcoO65I GGTNACC 1 cut(s) 181
EcoRII CCWGG 1 cut(s) 995
EcoRV GATATC 1 cut(s) 310
EcoT14I CCWWGG 3 cut(s) 337, 642, 760
EcoT22I ATGCAT 1 cut(s) 257
ErhI CCWWGG 3 cut(s) 337, 642, 760
FaeI CATG 7 cut(s) 241, 255, 259, 646, 764, 851, 1157
FaqI GGGAC 3 cut(s) 10, 707, 1131
FatI CATG 7 cut(s) 237, 251, 255, 642, 760, 847, 1153
FauI CCCGC 1 cut(s) 1079
FauNDI CATATG 1 cut(s) 1029
FblI GTMKAC 1 cut(s) 917
Fnu4HI GCNGC 7 cut(s) 355, 465, 527, 591, 708, 1047, 1058
FokI GGATG 2 cut(s) 169, 659
Fsp4HI GCNGC 7 cut(s) 355, 465, 527, 591, 708, 1047, 1058
FspBI CTAG 2 cut(s) 113, 554
GlaI GCGC 4 cut(s) 606, 758, 790, 797
GluI GCNGC 7 cut(s) 355, 465, 527, 591, 708, 1047, 1058
HaeII RGCGCY 1 cut(s) 792
HaeIII GGCC 5 cut(s) 117, 149, 242, 652, 1130
HapII CCGG 2 cut(s) 125, 504
HgaI GACGC 2 cut(s) 346, 611
HhaI GCGC 4 cut(s) 607, 759, 791, 798
Hin1I GRCGYC 1 cut(s) 357
Hin1II CATG 7 cut(s) 241, 255, 259, 646, 764, 851, 1157
Hin6I GCGC 4 cut(s) 605, 757, 789, 796
HinP1I GCGC 4 cut(s) 605, 757, 789, 796
HincII GTYRAC 1 cut(s) 661
HindII GTYRAC 1 cut(s) 661
HinfI GANTC 6 cut(s) 42, 131, 248, 302, 369, 739
HpaI GTTAAC 1 cut(s) 661
HpaII CCGG 2 cut(s) 125, 504
HphI GGTGA 7 cut(s) 37, 85, 175, 352, 872, 881, 1200
Hpy166II GTNNAC 3 cut(s) 661, 918, 1208
Hpy188I TCNGA 9 cut(s) 41, 141, 291, 307, 368, 401, 738, 748, 970
Hpy188III TCNNGA 3 cut(s) 320, 805, 940
Hpy8I GTNNAC 3 cut(s) 661, 918, 1208
Hpy99I CGWCG 1 cut(s) 248
HpyAV CCTTC 1 cut(s) 753
HpyCH4III ACNGT 4 cut(s) 57, 173, 550, 665
HpyCH4IV ACGT 2 cut(s) 426, 1173
HpyCH4V TGCA 6 cut(s) 109, 255, 539, 841, 847, 1033
HpyF10VI GCNNNNNNNGC 2 cut(s) 713, 795
HpyF3I CTNAG 8 cut(s) 138, 365, 389, 711, 735, 785, 792, 951
HpySE526I ACGT 2 cut(s) 426, 1173
Hsp92I GRCGYC 1 cut(s) 357
Hsp92II CATG 7 cut(s) 241, 255, 259, 646, 764, 851, 1157
HspAI GCGC 4 cut(s) 605, 757, 789, 796
KflI GGGWCCC 1 cut(s) 694
KspAI GTTAAC 1 cut(s) 661
Kzo9I GATC 6 cut(s) 490, 679, 772, 781, 895, 1051
LguI GCTCTTC 1 cut(s) 95
LmnI GCTCC 1 cut(s) 587
LpnPI CCDG 8 cut(s) 138, 517, 534, 666, 790, 982, 1009, 1116
Lsp1109I GCAGC 4 cut(s) 451, 577, 1058, 1069
LweI GCATC 2 cut(s) 118, 1009
MaeI CTAG 2 cut(s) 113, 554
MaeII ACGT 2 cut(s) 426, 1173
MaeIII GTNAC 4 cut(s) 119, 181, 358, 513
MalI GATC 6 cut(s) 492, 681, 774, 783, 897, 1053
MboI GATC 6 cut(s) 490, 679, 772, 781, 895, 1051
MboII GAAGA 5 cut(s) 3, 82, 364, 620, 920
MflI RGATCY 1 cut(s) 490
MhlI GDGCHC 2 cut(s) 171, 1113
MluCI AATT 5 cut(s) 284, 532, 751, 1010, 1133
MlyI GAGTC 2 cut(s) 257, 733
Mph1103I ATGCAT 1 cut(s) 257
MroXI GAANNNNTTC 1 cut(s) 627
MseI TTAA 2 cut(s) 207, 660
MslI CAYNNNNRTG 3 cut(s) 688, 846, 852
MspA1I CMGCKG 1 cut(s) 464
MspI CCGG 2 cut(s) 125, 504
MspR9I CCNGG 3 cut(s) 125, 126, 997
MvaI CCWGG 1 cut(s) 997
MvnI CGCG 2 cut(s) 605, 798
MwoI GCNNNNNNNGC 2 cut(s) 713, 795
NciI CCSGG 2 cut(s) 125, 126
NcoI CCATGG 2 cut(s) 642, 760
NdeI CATATG 1 cut(s) 1029
NdeII GATC 6 cut(s) 490, 679, 772, 781, 895, 1051
NlaIII CATG 7 cut(s) 241, 255, 259, 646, 764, 851, 1157
NlaIV GGNNCC 2 cut(s) 695, 696
NmuCI GTSAC 3 cut(s) 119, 181, 358
NsiI ATGCAT 1 cut(s) 257
NspI RCATGY 1 cut(s) 1157
PaeR7I CTCGAG 2 cut(s) 164, 1112
PciI ACATGT 1 cut(s) 1153
PciSI GCTCTTC 1 cut(s) 95
PdmI GAANNNNTTC 1 cut(s) 627
PfeI GAWTC 4 cut(s) 42, 131, 302, 369
PflMI CCANNNNNTGG 1 cut(s) 238
PkrI GCNGC 7 cut(s) 356, 466, 528, 592, 709, 1048, 1059
PleI GAGTC 2 cut(s) 256, 733
PpsI GAGTC 2 cut(s) 256, 733
Ppu21I YACGTR 1 cut(s) 1174
PpuMI RGGWCCY 1 cut(s) 694
PscI ACATGT 1 cut(s) 1153
Psp5II RGGWCCY 1 cut(s) 694
Psp6I CCWGG 1 cut(s) 995
PspEI GGTNACC 1 cut(s) 181
PspGI CCWGG 1 cut(s) 995
PspN4I GGNNCC 2 cut(s) 695, 696
PspPI GGNCC 3 cut(s) 259, 650, 694
PspPPI RGGWCCY 1 cut(s) 694
PspXI VCTCGAGB 2 cut(s) 164, 1112
PsuI RGATCY 1 cut(s) 490
PvuII CAGCTG 1 cut(s) 464
RsaI GTAC 4 cut(s) 455, 566, 1041, 1172
RsaNI GTAC 4 cut(s) 454, 565, 1040, 1171
RseI CAYNNNNRTG 3 cut(s) 688, 846, 852
SapI GCTCTTC 1 cut(s) 95
SaqAI TTAA 2 cut(s) 207, 660
SatI GCNGC 7 cut(s) 355, 465, 527, 591, 708, 1047, 1058
Sau3AI GATC 6 cut(s) 490, 679, 772, 781, 895, 1051
Sau96I GGNCC 3 cut(s) 259, 650, 694
ScaI AGTACT 1 cut(s) 566
SchI GAGTC 2 cut(s) 257, 733
ScrFI CCNGG 3 cut(s) 125, 126, 997
SduI GDGCHC 2 cut(s) 171, 1113
SetI ASST 9 cut(s) 90, 183, 413, 429, 466, 592, 628, 1176, 1228
SfaNI GCATC 2 cut(s) 118, 1009
SfcI CTRYAG 2 cut(s) 486, 918
Sfr274I CTCGAG 2 cut(s) 164, 1112
SinI GGWCC 2 cut(s) 259, 694
SlaI CTCGAG 2 cut(s) 164, 1112
SmaI CCCGGG 1 cut(s) 126
SmiMI CAYNNNNRTG 3 cut(s) 688, 846, 852
SmlI CTYRAG 3 cut(s) 164, 433, 1112
SmoI CTYRAG 3 cut(s) 164, 433, 1112
Sse9I AATT 5 cut(s) 284, 532, 751, 1010, 1133
SspI AATATT 1 cut(s) 1186
SspMI CTAG 2 cut(s) 113, 554
StyD4I CCNGG 3 cut(s) 123, 124, 995
StyI CCWWGG 3 cut(s) 337, 642, 760
TaaI ACNGT 4 cut(s) 57, 173, 550, 665
TaiI ACGT 2 cut(s) 429, 1176
TaqI TCGA 3 cut(s) 165, 903, 1113
TasI AATT 5 cut(s) 284, 532, 751, 1010, 1133
TatI WGTACW 3 cut(s) 453, 564, 1039
TauI GCSGC 3 cut(s) 357, 529, 710
TfiI GAWTC 4 cut(s) 42, 131, 302, 369
Tru1I TTAA 2 cut(s) 207, 660
Tru9I TTAA 2 cut(s) 207, 660
TscAI CASTG 2 cut(s) 476, 1110
TseFI GTSAC 3 cut(s) 119, 181, 358
TseI GCWGC 4 cut(s) 464, 590, 1046, 1057
Tsp45I GTSAC 3 cut(s) 119, 181, 358
TspDTI ATGAA 3 cut(s) 181, 297, 828
TspGWI ACGGA 1 cut(s) 1161
TspMI CCCGGG 1 cut(s) 124
TspRI CASTG 2 cut(s) 476, 1110
Van91I CCANNNNNTGG 1 cut(s) 238
VpaK11BI GGWCC 2 cut(s) 259, 694
XapI RAATTY 4 cut(s) 284, 751, 1010, 1133
XceI RCATGY 1 cut(s) 1157
XhoI CTCGAG 2 cut(s) 164, 1112
XmaI CCCGGG 1 cut(s) 124
XmiI GTMKAC 1 cut(s) 917
XmnI GAANNNNTTC 1 cut(s) 627
XspI CTAG 2 cut(s) 113, 554
ZrmI AGTACT 1 cut(s) 566
Zsp2I ATGCAT 1 cut(s) 257
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.