Rh6AG172300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000612
Physical Location & Seq
Forward (+)
27968724 .. 27970273
1550 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG172300.1

Sequence Viewer

Length: 1290 bp
ATGGCAATCGTACCTCTTATGACATACGATGCTTCCCACGCACTGTTCCCAACACTTGTTCAAGACAATTGGAATACGATAATGAGCACCAATGCTGCATTGGTGCACAATGCTATTAACTCTGGCATTCCTCCACTAGAGCCCGAAGAAGATCGGACTATCGTCGTAACATTCTCTACTGTAGACCCTATTCCGGAACGTGAACTTAGAGACTTCTTTACTTGGTATATATATTGTACAACTGGGAATCAAATTACAGTTATGGATCATCATCATGTTATTGCTGCCATCCGTATGGAAAGTGTCCAACCCGGGGAGCGACCTTTTTGTGCCTACATTGTGTTTCGATATGCTTCTTTGGTTGCACGTGTCCTTGGTGGAAACCAGAAGATGACATTCCACATTAATAGGTTTATTGTTTCCGGTAGGAAATATGAGCAGTCTCTAGAAGAGTTTAACAAATTTCACAACATTGATCGGAGGCTCTTCACTCGTTTAATCTACGGTCTGAGACGTGACCTGGATGAATCAGCAGGGGTCATGGCATTGTGGATGTCGCTGGAGCACACCAGCAAGGAGTTTAACAACTTGGTGAACAAGGCATTGACTCTACCCGACACTGAGCTCAATGCCATGGCCGACGAGACGGTAATAGCCTTGAATTACATTAAGATTGATGATATCCAGAGTGACACGGAAATGCCTAAGCTCCAAGCCATAAGTGAAAGTCCTGTCACCCTCAAGTTCTTCCTTGACAACCGCCATGTGATCATTTGCGCAGCCATCAAGTTTCTCCAAGATGTTTGCTTGAGAGCTTTTCAGGACTTCCCTTATCAACCATACTACCATGCCAAGGCGAAGCTTATTGAAGAAACTAGCATCATTTTTCATCAAGAGAGCCAGATCGAGAATAAAGAAGCGGGGGAGACTTGTAGGAATTTGCCGTTGAGTGATAATGAGTGTGATGAACAAGAGAGGACTCTTTTCCTAACATTCTCTAAAGGGTTCCCCCTTTCGGAAAATGAAGTCCGAGAGTGTTTCACTAGGGAATTTGGTGATATTATTGATCGTATCCACATGCAAGAAGTTAAGGAAAAGTATCAGCAGCCTCTTTTTGCTCAACTAGTGGTTCGTTCGGCATCCTTGATTCCAGTGATTCTTGATGGAAGAAGCAAGGTGTGCTTGAGCATAAATGGCAAGCACATTAGGGCCAAAAAATCTGTGCCTAGGCTGCGATCAAAATCACCAGAAGCATCATCCCCAACCATCATAAGGCCAACTACTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

429

Amino Acids

49.27

Weight (kDa)

5.86

Isoelectric Point (pI)

57.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000612)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G49290 AT5G13620
fragaria_vesca FvH4_1g08631 FvH4_2g11491 FvH4_3g26240 FvH4_7g20310 FvH4_7g20310 FvH4_7g20311
malus_domestica MD02G1091200.v1.1 MD07G1180400.v1.1 MD15G1217400.v1.1
prunus_persica Prupe.2G219300_v2.0.a1 Prupe.2G219700_v2.0.a1 Prupe.7G199100_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0364241 RchiOBHm_Chr1g0364261 RchiOBHm_Chr2g0094911 RchiOBHm_Chr5g0048831 RchiOBHm_Chr5g0048891 RchiOBHm_Chr5g0048921 RchiOBHm_Chr6g0270221
rosa_laevigata RLG00000013804 RLG00000016530 RLG00000027499 RLG00000027502 RLG00000027503 RLG00000034558
rosa_multiflora Rmu_co8509593.1_g000001 Rmu_sc0002138.1_g000006 Rmu_sc0003628.1_g000024 Rmu_sc0006611.1_g000002 Rmu_sc0011253.1_g000002 Rmu_sc0011664.1_g000001 Rmu_sc0023830.1_g000002 Rmu_sc0023830.1_g000003
rosa_roxburghii Rroxscaffold_1G00033000 Rroxscaffold_2G00146780 Rroxscaffold_4G00292480 Rroxscaffold_4G00292520 Rroxscaffold_4G00292540 Rroxscaffold_7G00198040
rosa_rugosa Rorug01G0315200 Rorug01G0315300.1 Rorug02G0048800 Rorug05G0241300 Rorug06G0053800
rosa_samantha Rh1AG322400 Rh1AG322500 Rh1BG285300 Rh1BG285400 Rh1CG301700 Rh1CG301900 Rh1DG316700 Rh1DG316800 Rh2AG095400 Rh2BG096400 Rh2CG098400 Rh2DG095100 Rh5AG321000 Rh5AG321300 Rh5BG331300 Rh5BG331400 Rh5BG331500 Rh5CG356900 Rh5DG342800 Rh5DG342900 Rh5DG343100 Rh5DG343300 Rh6AG172300 Rh6BG176600 Rh6CG172500 Rh6DG163800
rosa_wichuraiana Rw1G028560 Rw1G028570 Rw2G007180 Rw5G030080 Rw5G030110 Rw5G030290 Rw5G030320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 778
AccI GTMKAC 1 cut(s) 183
AccIII TCCGGA 1 cut(s) 193
AciI CCGC 2 cut(s) 760, 920
AclWI GGATC 1 cut(s) 273
AcoI YGGCCR 1 cut(s) 636
AcsI RAATTY 3 cut(s) 461, 937, 1049
AcvI CACGTG 1 cut(s) 368
AfaI GTAC 2 cut(s) 12, 238
AfiI CCNNNNNNNGG 5 cut(s) 193, 313, 853, 1015, 1272
AflIII ACRYGT 1 cut(s) 367
AgsI TTSAA 3 cut(s) 62, 661, 869
AhlI ACTAGT 1 cut(s) 1123
AjiI CACGTC 1 cut(s) 515
AjnI CCWGG 1 cut(s) 519
AluBI AGCT 4 cut(s) 625, 709, 815, 862
AluI AGCT 4 cut(s) 625, 709, 815, 862
Alw21I GWGCWC 4 cut(s) 89, 108, 567, 627
Alw26I GTCTC 5 cut(s) 204, 447, 505, 638, 920
Alw44I GTGCAC 1 cut(s) 104
AlwI GGATC 1 cut(s) 273
Ama87I CYCGRG 1 cut(s) 311
Aor13HI TCCGGA 1 cut(s) 193
AoxI GGCC 3 cut(s) 636, 1209, 1274
ApaLI GTGCAC 1 cut(s) 104
ApeKI GCWGC 5 cut(s) 95, 284, 779, 1105, 1231
ApoI RAATTY 3 cut(s) 461, 937, 1049
AseI ATTAAT 1 cut(s) 405
AspA2I CCTAGG 1 cut(s) 1226
AspLEI GCGC 1 cut(s) 779
AspS9I GGNCC 1 cut(s) 1209
AsuC2I CCSGG 2 cut(s) 312, 313
AsuHPI GGTGA 4 cut(s) 604, 727, 1067, 1236
AvaI CYCGRG 1 cut(s) 311
AvrII CCTAGG 1 cut(s) 1226
BaeGI GKGCMC 1 cut(s) 108
BanII GRGCYC 2 cut(s) 144, 627
BbrPI CACGTG 1 cut(s) 368
Bbv12I GWGCWC 4 cut(s) 89, 108, 567, 627
BbvI GCAGC 5 cut(s) 82, 271, 791, 1117, 1218
BccI CCATC 4 cut(s) 296, 791, 1157, 1274
BceAI ACGGC 1 cut(s) 928
BciT130I CCWGG 1 cut(s) 521
BciVI GTATCC 1 cut(s) 1082
BclI TGATCA 1 cut(s) 768
BcnI CCSGG 2 cut(s) 312, 313
BcoDI GTCTC 5 cut(s) 204, 447, 505, 638, 920
BcuI ACTAGT 1 cut(s) 1123
BfaI CTAG 6 cut(s) 137, 446, 876, 1044, 1124, 1227
BfmI CTRYAG 1 cut(s) 180
BfuI GTATCC 1 cut(s) 1082
BisI GCNGC 5 cut(s) 96, 285, 780, 1106, 1232
BlnI CCTAGG 1 cut(s) 1226
BlsI GCNGC 5 cut(s) 97, 286, 781, 1107, 1233
Bme1390I CCNGG 3 cut(s) 312, 313, 521
BmeT110I CYCGRG 1 cut(s) 311
BmgBI CACGTC 1 cut(s) 515
BmgT120I GGNCC 1 cut(s) 1209
BmiI GGNNCC 1 cut(s) 1007
BmrFI CCNGG 3 cut(s) 312, 313, 521
BmrI ACTGGG 1 cut(s) 252
BmsI GCATC 4 cut(s) 19, 888, 1148, 1262
BmuI ACTGGG 1 cut(s) 252
BoxI GACNNNNGTC 1 cut(s) 161
BpmI CTGGAG 1 cut(s) 581
Bpu10I CCTNAGC 1 cut(s) 705
BpuEI CTTGAG 3 cut(s) 725, 829, 1204
BpuMI CCSGG 2 cut(s) 312, 313
BsaAI YACGTR 1 cut(s) 368
BsaBI GATNNNNATC 2 cut(s) 270, 1240
BsaJI CCNNGG 6 cut(s) 311, 312, 373, 633, 852, 1226
BsaWI WCCGGW 2 cut(s) 193, 422
Bsc4I CCNNNNNNNGG 5 cut(s) 193, 313, 853, 1015, 1272
Bse1I ACTGG 2 cut(s) 247, 1151
Bse8I GATNNNNATC 2 cut(s) 270, 1240
BseAI TCCGGA 1 cut(s) 193
BseBI CCWGG 1 cut(s) 521
BseDI CCNNGG 6 cut(s) 311, 312, 373, 633, 852, 1226
BseGI GGATG 5 cut(s) 288, 529, 558, 1139, 1256
BseJI GATNNNNATC 2 cut(s) 270, 1240
BseLI CCNNNNNNNGG 5 cut(s) 193, 313, 853, 1015, 1272
BseMII CTCAG 2 cut(s) 500, 612
BseNI ACTGG 2 cut(s) 247, 1151
BseSI GKGCMC 1 cut(s) 108
BseXI GCAGC 5 cut(s) 82, 271, 791, 1117, 1218
BshFI GGCC 3 cut(s) 638, 1211, 1276
BsiHKAI GWGCWC 4 cut(s) 89, 108, 567, 627
BsiHKCI CYCGRG 1 cut(s) 311
BsiSI CCGG 3 cut(s) 194, 312, 423
BslI CCNNNNNNNGG 5 cut(s) 193, 313, 853, 1015, 1272
BsmAI GTCTC 5 cut(s) 204, 447, 505, 638, 920
BsmBI CGTCTC 2 cut(s) 505, 638
BsmI GAATGC 1 cut(s) 126
BsnI GGCC 3 cut(s) 638, 1211, 1276
BsoBI CYCGRG 1 cut(s) 311
Bsp1286I GDGCHC 5 cut(s) 89, 108, 144, 567, 627
Bsp13I TCCGGA 1 cut(s) 193
Bsp1407I TGTACA 1 cut(s) 236
Bsp143I GATC 7 cut(s) 151, 265, 475, 768, 903, 1066, 1235
Bsp19I CCATGG 1 cut(s) 633
BspACI CCGC 2 cut(s) 760, 920
BspANI GGCC 3 cut(s) 638, 1211, 1276
BspCNI CTCAG 2 cut(s) 501, 613
BspEI TCCGGA 1 cut(s) 193
BspLI GGNNCC 1 cut(s) 1007
BspPI GGATC 1 cut(s) 273
BspQI GCTCTTC 1 cut(s) 491
BsrGI TGTACA 1 cut(s) 236
BsrI ACTGG 2 cut(s) 247, 1151
BssECI CCNNGG 6 cut(s) 311, 312, 373, 633, 852, 1226
BssMI GATC 7 cut(s) 151, 265, 475, 768, 903, 1066, 1235
BssT1I CCWWGG 4 cut(s) 373, 633, 852, 1226
Bst2UI CCWGG 1 cut(s) 521
Bst4CI ACNGT 5 cut(s) 45, 181, 259, 506, 649
Bst6I CTCTTC 2 cut(s) 444, 491
BstAPI GCANNNNNTGC 1 cut(s) 1179
BstAUI TGTACA 1 cut(s) 236
BstBAI YACGTR 1 cut(s) 368
BstC8I GCNNGC 1 cut(s) 1199
BstDEI CTNAG 4 cut(s) 206, 509, 621, 705
BstDSI CCRYGG 1 cut(s) 633
BstF5I GGATG 5 cut(s) 288, 529, 558, 1139, 1256
BstHHI GCGC 1 cut(s) 779
BstKTI GATC 7 cut(s) 154, 268, 478, 771, 906, 1069, 1238
BstMAI GTCTC 5 cut(s) 204, 447, 505, 638, 920
BstMBI GATC 7 cut(s) 151, 265, 475, 768, 903, 1066, 1235
BstMWI GCNNNNNNNGC 4 cut(s) 38, 1179, 1194, 1231
BstNI CCWGG 1 cut(s) 521
BstNSI RCATGY 1 cut(s) 1081
BstPAI GACNNNNGTC 1 cut(s) 161
BstSCI CCNGG 3 cut(s) 310, 311, 519
BstSFI CTRYAG 1 cut(s) 180
BstSLI GKGCMC 1 cut(s) 108
BstV1I GCAGC 5 cut(s) 82, 271, 791, 1117, 1218
BstXI CCANNNNNNTGG 1 cut(s) 295
BsuI GTATCC 1 cut(s) 1082
BsuRI GGCC 3 cut(s) 638, 1211, 1276
BtgI CCRYGG 1 cut(s) 633
BtrI CACGTC 1 cut(s) 515
BtsCI GGATG 5 cut(s) 288, 529, 558, 1139, 1256
BtsIMutI CAGTG 3 cut(s) 41, 618, 1158
Cac8I GCNNGC 1 cut(s) 1199
CfoI GCGC 1 cut(s) 779
Cfr13I GGNCC 1 cut(s) 1209
Cfr9I CCCGGG 1 cut(s) 311
Csp6I GTAC 2 cut(s) 11, 237
CviAII CATG 6 cut(s) 275, 541, 634, 764, 848, 1078
CviQI GTAC 2 cut(s) 11, 237
DdeI CTNAG 4 cut(s) 206, 509, 621, 705
DpnI GATC 7 cut(s) 153, 267, 477, 770, 905, 1068, 1237
DpnII GATC 7 cut(s) 151, 265, 475, 768, 903, 1066, 1235
EaeI YGGCCR 1 cut(s) 636
Eam1104I CTCTTC 2 cut(s) 444, 491
EarI CTCTTC 2 cut(s) 444, 491
Ecl136II GAGCTC 1 cut(s) 625
Eco130I CCWWGG 4 cut(s) 373, 633, 852, 1226
Eco24I GRGCYC 2 cut(s) 144, 627
Eco32I GATATC 1 cut(s) 682
Eco53kI GAGCTC 1 cut(s) 625
Eco72I CACGTG 1 cut(s) 368
Eco88I CYCGRG 1 cut(s) 311
EcoICRI GAGCTC 1 cut(s) 625
EcoRII CCWGG 1 cut(s) 519
EcoRV GATATC 1 cut(s) 682
EcoT14I CCWWGG 4 cut(s) 373, 633, 852, 1226
EcoT38I GRGCYC 2 cut(s) 144, 627
ErhI CCWWGG 4 cut(s) 373, 633, 852, 1226
Esp3I CGTCTC 2 cut(s) 505, 638
FaeI CATG 6 cut(s) 278, 544, 637, 767, 851, 1081
FalI AAGNNNNNCTT 2 cut(s) 1166, 1198
FatI CATG 6 cut(s) 274, 540, 633, 763, 847, 1077
FauI CCCGC 1 cut(s) 913
FbaI TGATCA 1 cut(s) 768
FblI GTMKAC 1 cut(s) 183
Fnu4HI GCNGC 5 cut(s) 96, 285, 780, 1106, 1232
FokI GGATG 5 cut(s) 275, 536, 565, 1126, 1243
FriOI GRGCYC 2 cut(s) 144, 627
Fsp4HI GCNGC 5 cut(s) 96, 285, 780, 1106, 1232
FspBI CTAG 6 cut(s) 137, 446, 876, 1044, 1124, 1227
FspI TGCGCA 1 cut(s) 778
GlaI GCGC 1 cut(s) 778
GluI GCNGC 5 cut(s) 96, 285, 780, 1106, 1232
GsuI CTGGAG 1 cut(s) 581
HaeIII GGCC 3 cut(s) 638, 1211, 1276
HapII CCGG 3 cut(s) 194, 312, 423
HhaI GCGC 1 cut(s) 779
Hin1II CATG 6 cut(s) 278, 544, 637, 767, 851, 1081
Hin6I GCGC 1 cut(s) 777
HinP1I GCGC 1 cut(s) 777
HindIII AAGCTT 1 cut(s) 860
HinfI GANTC 6 cut(s) 247, 527, 607, 979, 1147, 1156
HpaII CCGG 3 cut(s) 194, 312, 423
HphI GGTGA 4 cut(s) 604, 727, 1067, 1236
Hpy166II GTNNAC 4 cut(s) 106, 184, 203, 595
Hpy188I TCNGA 5 cut(s) 156, 480, 510, 1018, 1031
Hpy188III TCNNGA 8 cut(s) 62, 194, 446, 685, 821, 893, 907, 1160
Hpy8I GTNNAC 4 cut(s) 106, 184, 203, 595
Hpy99I CGWCG 2 cut(s) 167, 644
HpyCH4III ACNGT 5 cut(s) 45, 181, 259, 506, 649
HpyCH4IV ACGT 3 cut(s) 199, 367, 514
HpyCH4V TGCA 4 cut(s) 98, 106, 365, 1081
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 1179, 1194, 1231
HpyF3I CTNAG 4 cut(s) 206, 509, 621, 705
HpySE526I ACGT 3 cut(s) 199, 367, 514
Hsp92II CATG 6 cut(s) 278, 544, 637, 767, 851, 1081
HspAI GCGC 1 cut(s) 777
Kpn2I TCCGGA 1 cut(s) 193
Ksp22I TGATCA 1 cut(s) 768
Kzo9I GATC 7 cut(s) 151, 265, 475, 768, 903, 1066, 1235
LguI GCTCTTC 1 cut(s) 491
LmnI GCTCC 3 cut(s) 316, 562, 714
Lsp1109I GCAGC 5 cut(s) 82, 271, 791, 1117, 1218
LweI GCATC 4 cut(s) 19, 888, 1148, 1262
MaeI CTAG 6 cut(s) 137, 446, 876, 1044, 1124, 1227
MaeII ACGT 3 cut(s) 199, 367, 514
MaeIII GTNAC 4 cut(s) 166, 515, 689, 733
MalI GATC 7 cut(s) 153, 267, 477, 770, 905, 1068, 1237
MboI GATC 7 cut(s) 151, 265, 475, 768, 903, 1066, 1235
MboII GAAGA 8 cut(s) 158, 161, 400, 461, 478, 739, 881, 1179
MfeI CAATTG 1 cut(s) 67
MhlI GDGCHC 5 cut(s) 89, 108, 144, 567, 627
MluCI AATT 6 cut(s) 67, 252, 461, 661, 937, 1049
MlyI GAGTC 2 cut(s) 601, 973
MmeI TCCRAC 1 cut(s) 331
MnlI CCTC 6 cut(s) 24, 141, 474, 749, 969, 1119
MroI TCCGGA 1 cut(s) 193
MseI TTAA 7 cut(s) 117, 405, 456, 497, 582, 669, 1089
MslI CAYNNNNRTG 3 cut(s) 273, 293, 698
MspI CCGG 3 cut(s) 194, 312, 423
MspR9I CCNGG 3 cut(s) 312, 313, 521
MunI CAATTG 1 cut(s) 67
Mva1269I GAATGC 1 cut(s) 126
MvaI CCWGG 1 cut(s) 521
MwoI GCNNNNNNNGC 4 cut(s) 38, 1179, 1194, 1231
NciI CCSGG 2 cut(s) 312, 313
NcoI CCATGG 1 cut(s) 633
NdeII GATC 7 cut(s) 151, 265, 475, 768, 903, 1066, 1235
NlaIII CATG 6 cut(s) 278, 544, 637, 767, 851, 1081
NlaIV GGNNCC 1 cut(s) 1007
NmuCI GTSAC 3 cut(s) 515, 689, 733
NsbI TGCGCA 1 cut(s) 778
NspI RCATGY 1 cut(s) 1081
PciSI GCTCTTC 1 cut(s) 491
PctI GAATGC 1 cut(s) 126
PfeI GAWTC 4 cut(s) 247, 527, 1147, 1156
PkrI GCNGC 5 cut(s) 97, 286, 781, 1107, 1233
PleI GAGTC 2 cut(s) 601, 973
PmaCI CACGTG 1 cut(s) 368
PmlI CACGTG 1 cut(s) 368
PpsI GAGTC 2 cut(s) 601, 973
Ppu21I YACGTR 1 cut(s) 368
PshAI GACNNNNGTC 1 cut(s) 161
PshBI ATTAAT 1 cut(s) 405
Psp124BI GAGCTC 1 cut(s) 627
Psp6I CCWGG 1 cut(s) 519
PspCI CACGTG 1 cut(s) 368
PspGI CCWGG 1 cut(s) 519
PspN4I GGNNCC 1 cut(s) 1007
PspPI GGNCC 1 cut(s) 1209
RsaI GTAC 2 cut(s) 12, 238
RsaNI GTAC 2 cut(s) 11, 237
RseI CAYNNNNRTG 3 cut(s) 273, 293, 698
SacI GAGCTC 1 cut(s) 627
SapI GCTCTTC 1 cut(s) 491
SaqAI TTAA 7 cut(s) 117, 405, 456, 497, 582, 669, 1089
SatI GCNGC 5 cut(s) 96, 285, 780, 1106, 1232
Sau3AI GATC 7 cut(s) 151, 265, 475, 768, 903, 1066, 1235
Sau96I GGNCC 1 cut(s) 1209
SchI GAGTC 2 cut(s) 601, 973
ScrFI CCNGG 3 cut(s) 312, 313, 521
SduI GDGCHC 5 cut(s) 89, 108, 144, 567, 627
SfaNI GCATC 4 cut(s) 19, 888, 1148, 1262
SfcI CTRYAG 1 cut(s) 180
SmaI CCCGGG 1 cut(s) 313
SmiMI CAYNNNNRTG 3 cut(s) 273, 293, 698
SmlI CTYRAG 3 cut(s) 740, 808, 1183
SmoI CTYRAG 3 cut(s) 740, 808, 1183
SpeI ACTAGT 1 cut(s) 1123
Sse9I AATT 6 cut(s) 67, 252, 461, 661, 937, 1049
SsiI CCGC 2 cut(s) 760, 920
SspMI CTAG 6 cut(s) 137, 446, 876, 1044, 1124, 1227
SstI GAGCTC 1 cut(s) 627
StyD4I CCNGG 3 cut(s) 310, 311, 519
StyI CCWWGG 4 cut(s) 373, 633, 852, 1226
TaaI ACNGT 5 cut(s) 45, 181, 259, 506, 649
TaiI ACGT 3 cut(s) 202, 370, 517
TaqI TCGA 2 cut(s) 346, 906
TasI AATT 6 cut(s) 67, 252, 461, 661, 937, 1049
TatI WGTACW 1 cut(s) 236
TfiI GAWTC 4 cut(s) 247, 527, 1147, 1156
Tru1I TTAA 7 cut(s) 117, 405, 456, 497, 582, 669, 1089
Tru9I TTAA 7 cut(s) 117, 405, 456, 497, 582, 669, 1089
TscAI CASTG 3 cut(s) 48, 625, 1158
TseFI GTSAC 3 cut(s) 515, 689, 733
TseI GCWGC 5 cut(s) 95, 284, 779, 1105, 1231
Tsp45I GTSAC 3 cut(s) 515, 689, 733
TspDTI ATGAA 4 cut(s) 540, 878, 981, 1038
TspGWI ACGGA 2 cut(s) 281, 710
TspMI CCCGGG 1 cut(s) 311
TspRI CASTG 3 cut(s) 48, 625, 1158
VneI GTGCAC 1 cut(s) 104
VspI ATTAAT 1 cut(s) 405
XapI RAATTY 3 cut(s) 461, 937, 1049
XbaI TCTAGA 1 cut(s) 445
XceI RCATGY 1 cut(s) 1081
XcmI CCANNNNNNNNNTGG 1 cut(s) 97
XmaI CCCGGG 1 cut(s) 311
XmaJI CCTAGG 1 cut(s) 1226
XmiI GTMKAC 1 cut(s) 183
XspI CTAG 6 cut(s) 137, 446, 876, 1044, 1124, 1227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.