Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0000649

Physical Location & Seq

Genomic Coordinates Forward (+)

1511231 .. 1514667

Gene Structure 3437 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g02490.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1242 bp

ATGCTCTTTTTACGCGCTTGGAAAGCCTTCACATCCTGTTTTGGATTCTCTCTAATGGCGACCGAAGCACCAGAGCAACTCGCCGCCGACGAAGTCAAATCCATGTCGATCTCCGACGAGGTCAAACCGCCGTCGGTCGCCGCCGAATCTCAGCCCTCTAGCTCGTCCGCTACTCCATCCGTCCCGCTGAGCTTGGTTGAGAAGTACGATATCTTGAGGAGTATCGCGGAGGAGTGTGTCCAAGACGAGGAGCTCAAGAAGTTGCTGGCGAACAAGGCCGAGCCGATCTGCTACGACGGATTCGAACCTTCCGGTAGGATGCATATCGCTCAGGGAGTTTTGAAGGCGATTAATGTGAACAAGATGACTTCCTGTGGCTGTAGAGTGAAGATATGGATTGCGGATTGGTTTGCGCAGCTGAACAATAAGATGGGGGGAGATTTGAAGAAGATTGAGACTGTGGGGAAGTACTTCATTGAGATATGGAGGTCTGTGGGGATGAATCTGGACGATGGGAAAGTTGAGTTCTTGTGGTCTTCGAAGGAGATCAATGAGAGGGCGCATGAGTACTGGCCGCGTGTGATGGACATTGCCAGGAAAAACAAGCTTCCGAGGATTATCAGGTGTAGTCAAATTATGGGCCGATCGGATCAAGATGAGTTGACTGCTGCCCAGATCCTCTACCCATGTATGCAATGCGCAGATATTTTCTTCCTGCAGGCTGACATCTGTCAACTGGGAATGGATCAACGTAAAGTGAATATGCTCGCACGAGAGTACTGTGACGACATCAAGAAGAAAAACAAGCCTATTATTTTGTCACACCATATGCTACCCGGTTTACAGCAAGGACAGGATAAAATGTCGAAAAGTGATCTATCCTCCTCGATATTTATGGAAGATGAAGAGGCGGAAGTGAACACAAAGATAAAGAAGGCTTACTGTCCTCCAGGAACGGTTGAAGGCAATCCCTGTTTGGAGTACGTACAGTACCTCATTTTCCCTTGGTTTGATGAGTTTACAGTAGAGCGCAGCGAGAAGAATGGTGGAAATACAACTTTCACAAAGTTTGAAGTTTTGAGTGCTGCTTATGCAAAGGGTGAGGTGCATCCTGGCGACCTCAAACCGTCTTTGGCAAAAGCATTGAATAGGATACTGGAGCCTGTACGATCCCATTTCAAGAATGACAAAGCTGCCAAACAGCTCTTACAAAGTGTAAAGAACTATAGAGTCACCAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004812 GO:0004831 GO:0005488 GO:0005515 GO:0005524 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006437 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016597 GO:0016874 GO:0016875 GO:0017076 GO:0019538 GO:0019752 GO:0030554 GO:0031406 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0034645 GO:0034660 GO:0035639 GO:0036094 GO:0042802 GO:0042803 GO:0043038 GO:0043039 GO:0043043 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043177 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0046483 GO:0046983 GO:0071704 GO:0072545 GO:0090304 GO:0097159 GO:0097367 GO:0140098 GO:0140101 GO:1901265 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_1b

Protein Analysis

414

Amino Acids

46.75

Weight (kDa)

6.99

Isoelectric Point (pI)

51.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1b	PF00579	92 - 386	2e-60	tRNA synthetases class I (W and Y)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000649)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33840
fragaria_vesca	FvH4_2g00190 FvH4_4g18133 FvH4_4g36450 FvH4_5g02490 FvH4_5g35150 FvH4_6g35840
malus_domestica	MD04G1034100.v1.1 MD06G1084100.v1.1
prunus_persica	Prupe.2G139100_v2.0.a1 Prupe.5G096900_v2.0.a1 Prupe.5G096900_v2.0.a1 Prupe.5G100500_v2.0.a1 Prupe.5G100500_v2.0.a1 Prupe.5G100500_v2.0.a1
pyrus_communis	pycom04g02850
rosa_chinensis	RchiOBHm_Chr1g0324941 RchiOBHm_Chr1g0340751 RchiOBHm_Chr2g0133721 RchiOBHm_Chr2g0153921 RchiOBHm_Chr4g0396761 RchiOBHm_Chr4g0414291 RchiOBHm_Chr4g0429871 RchiOBHm_Chr4g0446211 RchiOBHm_Chr5g0057181 RchiOBHm_Chr5g0057391 RchiOBHm_Chr5g0077561 RchiOBHm_Chr6g0307121 RchiOBHm_Chr7g0197611
rosa_laevigata	RLG00000003922 RLG00000005681 RLG00000017313 RLG00000029149 RLG00000035152
rosa_multiflora	Rmu_co8043936.1_g000001 Rmu_sc0001164.1_g000009 Rmu_sc0001334.1_g000004 Rmu_sc0004952.1_g000011 Rmu_sc0013154.1_g000007 Rmu_sc0017650.1_g000006 Rmu_sc0018062.1_g000003
rosa_roxburghii	Rroxscaffold_1G00023030 Rroxscaffold_2G00094650 Rroxscaffold_3G00223000 Rroxscaffold_3G00232150 Rroxscaffold_3G00248030 Rroxscaffold_3G00248040 Rroxscaffold_3G00258320
rosa_rugosa	Rorug04G0184600 Rorug04G0368500 Rorug05G0306000 Rorug05G0307100 Rorug07G0041900
rosa_samantha	Rh2CG164400 Rh2DG389300 Rh3AG306800 Rh4AG430600 Rh4BG440000 Rh4CG457300 Rh4DG438500 Rh5AG375500 Rh5BG386300 Rh5CG409700 Rh5DG400300 Rh6CG481100 Rh7AG166300 Rh7AG360600 Rh7BG168400 Rh7CG174700 Rh7DG168000 Rh7DG387600
rosa_wichuraiana	Rw2G022790 Rw4G036780 Rw5G035320 Rw5G035460 Rw7G014480 Rw7G038030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	414, 700
AccII	CGCG	3 cut(s)	15, 227, 577
AciI	CCGC	9 cut(s)	84, 128, 141, 168, 185, 227, 401, 575, 911
AclWI	GGATC	4 cut(s)	657, 670, 753, 1164
AcoI	YGGCCR	1 cut(s)	572
AdeI	CACNNNGTG	1 cut(s)	1239
AfaI	GTAC	8 cut(s)	206, 470, 569, 779, 983, 987, 992, 1167
AfiI	CCNNNNNNNGG	1 cut(s)	247
AgsI	TTSAA	6 cut(s)	343, 445, 962, 1073, 1147, 1180
AjnI	CCWGG	4 cut(s)	593, 949, 1111, 1235
AluBI	AGCT	7 cut(s)	162, 192, 253, 418, 607, 1193, 1204
AluI	AGCT	7 cut(s)	162, 192, 253, 418, 607, 1193, 1204
Alw21I	GWGCWC	1 cut(s)	255
Alw26I	GTCTC	1 cut(s)	449
AlwI	GGATC	4 cut(s)	657, 670, 753, 1164
AoxI	GGCC	3 cut(s)	276, 572, 640
ApeKI	GCWGC	5 cut(s)	415, 668, 1032, 1085, 1193
AseI	ATTAAT	1 cut(s)	351
Asp700I	GAANNNNTTC	2 cut(s)	26, 470
AspLEI	GCGC	5 cut(s)	17, 415, 562, 701, 1032
AspS9I	GGNCC	1 cut(s)	640
AsuC2I	CCSGG	1 cut(s)	837
AsuHPI	GGTGA	2 cut(s)	1112, 1225
AsuII	TTCGAA	2 cut(s)	303, 539
BanII	GRGCYC	1 cut(s)	255
BauI	CACGAG	1 cut(s)	771
BbsI	GAAGAC	1 cut(s)	528
Bbv12I	GWGCWC	1 cut(s)	255
BbvI	GCAGC	5 cut(s)	427, 655, 1044, 1072, 1180
BccI	CCATC	4 cut(s)	184, 424, 506, 577
BceAI	ACGGC	1 cut(s)	115
BciT130I	CCWGG	4 cut(s)	595, 951, 1113, 1237
BciVI	GTATCC	1 cut(s)	1146
BcnI	CCSGG	1 cut(s)	837
BcoDI	GTCTC	1 cut(s)	449
BfaI	CTAG	1 cut(s)	159
BfmI	CTRYAG	3 cut(s)	379, 716, 1225
BfuI	GTATCC	1 cut(s)	1146
BisI	GCNGC	8 cut(s)	84, 141, 416, 575, 669, 1033, 1086, 1194
BlpI	GCTNAGC	1 cut(s)	188
BlsI	GCNGC	8 cut(s)	85, 142, 417, 576, 670, 1034, 1087, 1195
BmcAI	AGTACT	3 cut(s)	470, 569, 779
Bme1390I	CCNGG	5 cut(s)	595, 837, 951, 1113, 1237
BmgT120I	GGNCC	1 cut(s)	640
BmiI	GGNNCC	1 cut(s)	1161
BmrFI	CCNGG	5 cut(s)	595, 837, 951, 1113, 1237
BmrI	ACTGGG	1 cut(s)	746
BmsI	GCATC	2 cut(s)	309, 1117
BmuI	ACTGGG	1 cut(s)	746
BoxI	GACNNNNGTC	1 cut(s)	729
BpiI	GAAGAC	1 cut(s)	528
BpmI	CTGGAG	2 cut(s)	933, 1178
Bpu10I	CCTNAGC	1 cut(s)	330
Bpu1102I	GCTNAGC	1 cut(s)	188
Bpu14I	TTCGAA	2 cut(s)	303, 539
BpuEI	CTTGAG	2 cut(s)	235, 239
BpuMI	CCSGG	1 cut(s)	837
BsaAI	YACGTR	1 cut(s)	985
BsaBI	GATNNNNATC	1 cut(s)	323
BsaJI	CCNNGG	2 cut(s)	611, 1004
BsaWI	WCCGGW	1 cut(s)	311
Bsc4I	CCNNNNNNNGG	1 cut(s)	247
Bse1I	ACTGG	3 cut(s)	575, 741, 1161
Bse3DI	GCAATG	2 cut(s)	588, 701
Bse8I	GATNNNNATC	1 cut(s)	323
BseBI	CCWGG	4 cut(s)	595, 951, 1113, 1237
BseDI	CCNNGG	2 cut(s)	611, 1004
BseGI	GGATG	5 cut(s)	32, 176, 324, 504, 1108
BseJI	GATNNNNATC	1 cut(s)	323
BseLI	CCNNNNNNNGG	1 cut(s)	247
BseMI	GCAATG	2 cut(s)	588, 701
BseMII	CTCAG	3 cut(s)	164, 179, 344
BseNI	ACTGG	3 cut(s)	575, 741, 1161
BseRI	GAGGAG	4 cut(s)	232, 245, 263, 874
BseXI	GCAGC	5 cut(s)	427, 655, 1044, 1072, 1180
Bsh1236I	CGCG	3 cut(s)	15, 227, 577
Bsh1285I	CGRYCG	3 cut(s)	63, 138, 647
BshFI	GGCC	3 cut(s)	278, 574, 642
BsiEI	CGRYCG	3 cut(s)	63, 138, 647
BsiHKAI	GWGCWC	1 cut(s)	255
BsiSI	CCGG	2 cut(s)	312, 837
BslFI	GGGAC	1 cut(s)	167
BslI	CCNNNNNNNGG	1 cut(s)	247
BsmAI	GTCTC	1 cut(s)	449
BsmFI	GGGAC	1 cut(s)	167
BsnI	GGCC	3 cut(s)	278, 574, 642
Bsp119I	TTCGAA	2 cut(s)	303, 539
Bsp1286I	GDGCHC	1 cut(s)	255
Bsp143I	GATC	9 cut(s)	108, 285, 546, 644, 649, 675, 745, 874, 1169
Bsp1720I	GCTNAGC	1 cut(s)	188
BspACI	CCGC	9 cut(s)	84, 128, 141, 168, 185, 227, 401, 575, 911
BspANI	GGCC	3 cut(s)	278, 574, 642
BspCNI	CTCAG	3 cut(s)	163, 180, 343
BspFNI	CGCG	3 cut(s)	15, 227, 577
BspLI	GGNNCC	1 cut(s)	1161
BspMAI	CTGCAG	1 cut(s)	720
BspPI	GGATC	4 cut(s)	657, 670, 753, 1164
BspT104I	TTCGAA	2 cut(s)	303, 539
BsrDI	GCAATG	2 cut(s)	588, 701
BsrI	ACTGG	3 cut(s)	575, 741, 1161
BssECI	CCNNGG	2 cut(s)	611, 1004
BssMI	GATC	9 cut(s)	108, 285, 546, 644, 649, 675, 745, 874, 1169
BssSI	CACGAG	1 cut(s)	771
BssT1I	CCWWGG	1 cut(s)	1004
Bst2BI	CACGAG	1 cut(s)	771
Bst2UI	CCWGG	4 cut(s)	595, 951, 1113, 1237
Bst4CI	ACNGT	7 cut(s)	460, 782, 944, 958, 990, 1024, 1128
Bst6I	CTCTTC	1 cut(s)	900
BstBAI	YACGTR	1 cut(s)	985
BstBI	TTCGAA	2 cut(s)	303, 539
BstC8I	GCNNGC	3 cut(s)	267, 720, 768
BstDEI	CTNAG	3 cut(s)	150, 188, 330
BstF5I	GGATG	5 cut(s)	32, 176, 324, 504, 1108
BstFNI	CGCG	3 cut(s)	15, 227, 577
BstHHI	GCGC	5 cut(s)	17, 415, 562, 701, 1032
BstKTI	GATC	9 cut(s)	111, 288, 549, 647, 652, 678, 748, 877, 1172
BstMAI	GTCTC	1 cut(s)	449
BstMBI	GATC	9 cut(s)	108, 285, 546, 644, 649, 675, 745, 874, 1169
BstMCI	CGRYCG	3 cut(s)	63, 138, 647
BstMWI	GCNNNNNNNGC	4 cut(s)	23, 65, 275, 1091
BstNI	CCWGG	4 cut(s)	595, 951, 1113, 1237
BstPAI	GACNNNNGTC	1 cut(s)	729
BstSCI	CCNGG	5 cut(s)	593, 835, 949, 1111, 1235
BstSFI	CTRYAG	3 cut(s)	379, 716, 1225
BstSNI	TACGTA	1 cut(s)	985
BstUI	CGCG	3 cut(s)	15, 227, 577
BstV1I	GCAGC	5 cut(s)	427, 655, 1044, 1072, 1180
BstV2I	GAAGAC	1 cut(s)	528
BstX2I	RGATCY	1 cut(s)	675
BstYI	RGATCY	1 cut(s)	675
BsuI	GTATCC	1 cut(s)	1146
BsuRI	GGCC	3 cut(s)	278, 574, 642
BtsCI	GGATG	5 cut(s)	32, 176, 324, 504, 1108
Cac8I	GCNNGC	3 cut(s)	267, 720, 768
CfoI	GCGC	5 cut(s)	17, 415, 562, 701, 1032
Cfr13I	GGNCC	1 cut(s)	640
CsiI	ACCWGGT	1 cut(s)	1235
Csp6I	GTAC	8 cut(s)	205, 469, 568, 778, 982, 986, 991, 1166
CviAII	CATG	3 cut(s)	103, 563, 687
CviQI	GTAC	8 cut(s)	205, 469, 568, 778, 982, 986, 991, 1166
DdeI	CTNAG	3 cut(s)	150, 188, 330
DpnI	GATC	9 cut(s)	110, 287, 548, 646, 651, 677, 747, 876, 1171
DpnII	GATC	9 cut(s)	108, 285, 546, 644, 649, 675, 745, 874, 1169
DraIII	CACNNNGTG	1 cut(s)	1239
EaeI	YGGCCR	1 cut(s)	572
Eam1104I	CTCTTC	1 cut(s)	900
EarI	CTCTTC	1 cut(s)	900
EciI	GGCGGA	1 cut(s)	926
Ecl136II	GAGCTC	1 cut(s)	253
Eco105I	TACGTA	1 cut(s)	985
Eco130I	CCWWGG	1 cut(s)	1004
Eco24I	GRGCYC	1 cut(s)	255
Eco32I	GATATC	1 cut(s)	211
Eco53kI	GAGCTC	1 cut(s)	253
EcoICRI	GAGCTC	1 cut(s)	253
EcoRII	CCWGG	4 cut(s)	593, 949, 1111, 1235
EcoRV	GATATC	1 cut(s)	211
EcoT14I	CCWWGG	1 cut(s)	1004
EcoT22I	ATGCAT	1 cut(s)	324
EcoT38I	GRGCYC	1 cut(s)	255
ErhI	CCWWGG	1 cut(s)	1004
FaeI	CATG	3 cut(s)	106, 566, 690
FaqI	GGGAC	1 cut(s)	167
FatI	CATG	3 cut(s)	102, 562, 686
FauI	CCCGC	1 cut(s)	192
FauNDI	CATATG	1 cut(s)	828
Fnu4HI	GCNGC	8 cut(s)	84, 141, 416, 575, 669, 1033, 1086, 1194
FokI	GGATG	5 cut(s)	19, 163, 331, 511, 1095
FriOI	GRGCYC	1 cut(s)	255
Fsp4HI	GCNGC	8 cut(s)	84, 141, 416, 575, 669, 1033, 1086, 1194
FspBI	CTAG	1 cut(s)	159
FspI	TGCGCA	2 cut(s)	414, 700
GlaI	GCGC	5 cut(s)	16, 414, 561, 700, 1031
GluI	GCNGC	8 cut(s)	84, 141, 416, 575, 669, 1033, 1086, 1194
GsuI	CTGGAG	2 cut(s)	933, 1178
HaeIII	GGCC	3 cut(s)	278, 574, 642
HapII	CCGG	2 cut(s)	312, 837
HhaI	GCGC	5 cut(s)	17, 415, 562, 701, 1032
Hin1II	CATG	3 cut(s)	106, 566, 690
Hin6I	GCGC	5 cut(s)	15, 413, 560, 699, 1030
HinP1I	GCGC	5 cut(s)	15, 413, 560, 699, 1030
HincII	GTYRAC	2 cut(s)	663, 734
HindII	GTYRAC	2 cut(s)	663, 734
HindIII	AAGCTT	1 cut(s)	605
HinfI	GANTC	5 cut(s)	45, 146, 300, 502, 1230
HpaII	CCGG	2 cut(s)	312, 837
HphI	GGTGA	2 cut(s)	1112, 1225
Hpy166II	GTNNAC	6 cut(s)	358, 663, 734, 842, 919, 1020
Hpy188I	TCNGA	3 cut(s)	115, 612, 649
Hpy188III	TCNNGA	6 cut(s)	214, 256, 506, 653, 793, 1180
Hpy8I	GTNNAC	6 cut(s)	358, 663, 734, 842, 919, 1020
Hpy99I	CGWCG	4 cut(s)	92, 119, 136, 299
HpyAV	CCTTC	6 cut(s)	37, 318, 337, 535, 928, 956
HpyCH4III	ACNGT	7 cut(s)	460, 782, 944, 958, 990, 1024, 1128
HpyCH4IV	ACGT	2 cut(s)	751, 984
HpyCH4V	TGCA	5 cut(s)	322, 694, 718, 1094, 1108
HpyF10VI	GCNNNNNNNGC	4 cut(s)	23, 65, 275, 1091
HpyF3I	CTNAG	3 cut(s)	150, 188, 330
HpySE526I	ACGT	2 cut(s)	751, 984
Hsp92II	CATG	3 cut(s)	106, 566, 690
HspAI	GCGC	5 cut(s)	15, 413, 560, 699, 1030
Kzo9I	GATC	9 cut(s)	108, 285, 546, 644, 649, 675, 745, 874, 1169
LmnI	GCTCC	2 cut(s)	250, 1159
Lsp1109I	GCAGC	5 cut(s)	427, 655, 1044, 1072, 1180
LweI	GCATC	2 cut(s)	309, 1117
MabI	ACCWGGT	1 cut(s)	1235
MaeI	CTAG	1 cut(s)	159
MaeII	ACGT	2 cut(s)	751, 984
MaeIII	GTNAC	3 cut(s)	782, 819, 1231
MalI	GATC	9 cut(s)	110, 287, 548, 646, 651, 677, 747, 876, 1171
MboI	GATC	9 cut(s)	108, 285, 546, 644, 649, 675, 745, 874, 1169
MboII	GAAGA	9 cut(s)	400, 457, 460, 528, 703, 808, 911, 917, 1051
MflI	RGATCY	1 cut(s)	675
MhlI	GDGCHC	1 cut(s)	255
MluCI	AATT	1 cut(s)	633
MlyI	GAGTC	1 cut(s)	1239
MmeI	TCCRAC	1 cut(s)	138
Mph1103I	ATGCAT	1 cut(s)	324
MroXI	GAANNNNTTC	2 cut(s)	26, 470
MseI	TTAA	1 cut(s)	351
MspA1I	CMGCKG	2 cut(s)	187, 418
MspI	CCGG	2 cut(s)	312, 837
MspR9I	CCNGG	5 cut(s)	595, 837, 951, 1113, 1237
MvaI	CCWGG	4 cut(s)	595, 951, 1113, 1237
MvnI	CGCG	3 cut(s)	15, 227, 577
MwoI	GCNNNNNNNGC	4 cut(s)	23, 65, 275, 1091
NciI	CCSGG	1 cut(s)	837
NdeI	CATATG	1 cut(s)	828
NdeII	GATC	9 cut(s)	108, 285, 546, 644, 649, 675, 745, 874, 1169
NlaIII	CATG	3 cut(s)	106, 566, 690
NlaIV	GGNNCC	1 cut(s)	1161
NmeAIII	GCCGAG	1 cut(s)	304
NmuCI	GTSAC	3 cut(s)	782, 819, 1231
NsbI	TGCGCA	2 cut(s)	414, 700
NsiI	ATGCAT	1 cut(s)	324
NspV	TTCGAA	2 cut(s)	303, 539
PcsI	WCGNNNNNNNCGW	2 cut(s)	87, 300
PdmI	GAANNNNTTC	2 cut(s)	26, 470
PfeI	GAWTC	4 cut(s)	45, 146, 300, 502
PflFI	GACNNNGTC	2 cut(s)	92, 119
PfoI	TCCNGGA	1 cut(s)	949
PkrI	GCNGC	8 cut(s)	85, 142, 417, 576, 670, 1034, 1087, 1195
Ple19I	CGATCG	1 cut(s)	647
PleI	GAGTC	1 cut(s)	1238
PpsI	GAGTC	1 cut(s)	1238
Ppu21I	YACGTR	1 cut(s)	985
PshAI	GACNNNNGTC	1 cut(s)	729
PshBI	ATTAAT	1 cut(s)	351
Psp124BI	GAGCTC	1 cut(s)	255
Psp6I	CCWGG	4 cut(s)	593, 949, 1111, 1235
PspGI	CCWGG	4 cut(s)	593, 949, 1111, 1235
PspN4I	GGNNCC	1 cut(s)	1161
PspPI	GGNCC	1 cut(s)	640
PstI	CTGCAG	1 cut(s)	720
PsuI	RGATCY	1 cut(s)	675
PsyI	GACNNNGTC	2 cut(s)	92, 119
PvuI	CGATCG	1 cut(s)	647
PvuII	CAGCTG	1 cut(s)	418
RsaI	GTAC	8 cut(s)	206, 470, 569, 779, 983, 987, 992, 1167
RsaNI	GTAC	8 cut(s)	205, 469, 568, 778, 982, 986, 991, 1166
SacI	GAGCTC	1 cut(s)	255
SaqAI	TTAA	1 cut(s)	351
SatI	GCNGC	8 cut(s)	84, 141, 416, 575, 669, 1033, 1086, 1194
Sau3AI	GATC	9 cut(s)	108, 285, 546, 644, 649, 675, 745, 874, 1169
Sau96I	GGNCC	1 cut(s)	640
SbfI	CCTGCAGG	1 cut(s)	720
ScaI	AGTACT	3 cut(s)	470, 569, 779
SchI	GAGTC	1 cut(s)	1239
ScrFI	CCNGG	5 cut(s)	595, 837, 951, 1113, 1237
SdaI	CCTGCAGG	1 cut(s)	720
SduI	GDGCHC	1 cut(s)	255
SexAI	ACCWGGT	1 cut(s)	1235
SfaNI	GCATC	2 cut(s)	309, 1117
SfcI	CTRYAG	3 cut(s)	379, 716, 1225
SfuI	TTCGAA	2 cut(s)	303, 539
SmlI	CTYRAG	2 cut(s)	214, 254
SmoI	CTYRAG	2 cut(s)	214, 254
SnaBI	TACGTA	1 cut(s)	985
Sse8387I	CCTGCAGG	1 cut(s)	720
Sse9I	AATT	1 cut(s)	633
SsiI	CCGC	9 cut(s)	84, 128, 141, 168, 185, 227, 401, 575, 911
SspMI	CTAG	1 cut(s)	159
SstI	GAGCTC	1 cut(s)	255
StyD4I	CCNGG	5 cut(s)	593, 835, 949, 1111, 1235
StyI	CCWWGG	1 cut(s)	1004
TaaI	ACNGT	7 cut(s)	460, 782, 944, 958, 990, 1024, 1128
TaiI	ACGT	2 cut(s)	754, 987
TaqI	TCGA	5 cut(s)	107, 303, 539, 866, 887
TaqII	GACCGA	2 cut(s)	77, 124
TasI	AATT	1 cut(s)	633
TatI	WGTACW	3 cut(s)	468, 567, 777
TauI	GCSGC	3 cut(s)	86, 143, 577
TfiI	GAWTC	4 cut(s)	45, 146, 300, 502
Tru1I	TTAA	1 cut(s)	351
Tru9I	TTAA	1 cut(s)	351
TseFI	GTSAC	3 cut(s)	782, 819, 1231
TseI	GCWGC	5 cut(s)	415, 668, 1032, 1085, 1193
Tsp45I	GTSAC	3 cut(s)	782, 819, 1231
TspDTI	ATGAA	3 cut(s)	463, 515, 918
TspGWI	ACGGA	2 cut(s)	169, 312
Tth111I	GACNNNGTC	2 cut(s)	92, 119
VspI	ATTAAT	1 cut(s)	351
XmnI	GAANNNNTTC	2 cut(s)	26, 470
XspI	CTAG	1 cut(s)	159
ZrmI	AGTACT	3 cut(s)	470, 569, 779
Zsp2I	ATGCAT	1 cut(s)	324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.