Belongs to the class-I aminoacyl-tRNA synthetase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| tRNA-synt_1b | PF00579 | 51 - 298 | 6e-49 | tRNA synthetases class I (W and Y) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 291 |
| AccII | CGCG | 2 cut(s) | 104, 454 |
| AciI | CCGC | 5 cut(s) | 36, 104, 249, 452, 761 |
| AclWI | GGATC | 4 cut(s) | 499, 520, 603, 930 |
| AcoI | YGGCCR | 1 cut(s) | 449 |
| AcsI | RAATTY | 1 cut(s) | 136 |
| AfaI | GTAC | 7 cut(s) | 83, 446, 629, 837, 842, 933, 990 |
| AgsI | TTSAA | 2 cut(s) | 220, 946 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 19 |
| AjnI | CCWGG | 4 cut(s) | 431, 470, 685, 702 |
| AluBI | AGCT | 6 cut(s) | 42, 130, 295, 483, 959, 970 |
| AluI | AGCT | 6 cut(s) | 42, 130, 295, 483, 959, 970 |
| Alw21I | GWGCWC | 2 cut(s) | 132, 618 |
| Alw26I | GTCTC | 2 cut(s) | 27, 326 |
| AlwI | GGATC | 4 cut(s) | 499, 520, 603, 930 |
| AoxI | GGCC | 3 cut(s) | 153, 449, 700 |
| ApeKI | GCWGC | 4 cut(s) | 255, 292, 518, 959 |
| ApoI | RAATTY | 1 cut(s) | 136 |
| AseI | ATTAAT | 1 cut(s) | 228 |
| AspLEI | GCGC | 1 cut(s) | 292 |
| AsuHPI | GGTGA | 1 cut(s) | 326 |
| BanII | GRGCYC | 2 cut(s) | 132, 186 |
| BauI | CACGAG | 1 cut(s) | 621 |
| BbsI | GAAGAC | 1 cut(s) | 405 |
| Bbv12I | GWGCWC | 2 cut(s) | 132, 618 |
| BbvI | GCAGC | 4 cut(s) | 242, 304, 505, 946 |
| BccI | CCATC | 3 cut(s) | 61, 301, 906 |
| BceAI | ACGGC | 1 cut(s) | 190 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 269, 303 |
| BciT130I | CCWGG | 4 cut(s) | 433, 472, 687, 704 |
| BciVI | GTATCC | 1 cut(s) | 125 |
| BcoDI | GTCTC | 2 cut(s) | 27, 326 |
| BfaI | CTAG | 1 cut(s) | 119 |
| BfmI | CTRYAG | 4 cut(s) | 256, 369, 566, 873 |
| BfuI | GTATCC | 1 cut(s) | 125 |
| BisI | GCNGC | 6 cut(s) | 249, 256, 293, 452, 519, 960 |
| BlsI | GCNGC | 6 cut(s) | 250, 257, 294, 453, 520, 961 |
| BmcAI | AGTACT | 2 cut(s) | 446, 629 |
| Bme1390I | CCNGG | 4 cut(s) | 433, 472, 687, 704 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 19 |
| BmrFI | CCNGG | 4 cut(s) | 433, 472, 687, 704 |
| BmsI | GCATC | 1 cut(s) | 108 |
| BoxI | GACNNNNGTC | 1 cut(s) | 579 |
| BpiI | GAAGAC | 1 cut(s) | 405 |
| BpmI | CTGGAG | 1 cut(s) | 783 |
| Bpu10I | CCTNAGC | 1 cut(s) | 207 |
| BpuEI | CTTGAG | 2 cut(s) | 9, 116 |
| BsaAI | YACGTR | 1 cut(s) | 835 |
| BsaJI | CCNNGG | 1 cut(s) | 854 |
| BsaWI | WCCGGW | 1 cut(s) | 188 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 698, 728 |
| Bse1I | ACTGG | 2 cut(s) | 48, 452 |
| Bse3DI | GCAATG | 1 cut(s) | 551 |
| BseBI | CCWGG | 4 cut(s) | 433, 472, 687, 704 |
| BseDI | CCNNGG | 1 cut(s) | 854 |
| BseGI | GGATG | 2 cut(s) | 79, 381 |
| BseMI | GCAATG | 1 cut(s) | 551 |
| BseMII | CTCAG | 2 cut(s) | 9, 221 |
| BseNI | ACTGG | 2 cut(s) | 48, 452 |
| BseRI | GAGGAG | 2 cut(s) | 122, 724 |
| BseXI | GCAGC | 4 cut(s) | 242, 304, 505, 946 |
| BsgI | GTGCAG | 2 cut(s) | 570, 901 |
| Bsh1236I | CGCG | 2 cut(s) | 104, 454 |
| Bsh1285I | CGRYCG | 1 cut(s) | 9 |
| BshFI | GGCC | 3 cut(s) | 155, 451, 702 |
| BsiEI | CGRYCG | 1 cut(s) | 9 |
| BsiHKAI | GWGCWC | 2 cut(s) | 132, 618 |
| BsiSI | CCGG | 1 cut(s) | 189 |
| BsiWI | CGTACG | 1 cut(s) | 931 |
| BsmAI | GTCTC | 2 cut(s) | 27, 326 |
| BsmI | GAATGC | 1 cut(s) | 201 |
| BsnI | GGCC | 3 cut(s) | 155, 451, 702 |
| Bsp1286I | GDGCHC | 3 cut(s) | 132, 186, 618 |
| Bsp143I | GATC | 9 cut(s) | 6, 162, 423, 491, 499, 525, 595, 724, 935 |
| BspACI | CCGC | 5 cut(s) | 36, 104, 249, 452, 761 |
| BspANI | GGCC | 3 cut(s) | 155, 451, 702 |
| BspCNI | CTCAG | 2 cut(s) | 10, 220 |
| BspFNI | CGCG | 2 cut(s) | 104, 454 |
| BspHI | TCATGA | 1 cut(s) | 862 |
| BspMAI | CTGCAG | 2 cut(s) | 260, 570 |
| BspPI | GGATC | 4 cut(s) | 499, 520, 603, 930 |
| BspQI | GCTCTTC | 1 cut(s) | 120 |
| BsrDI | GCAATG | 1 cut(s) | 551 |
| BsrI | ACTGG | 2 cut(s) | 48, 452 |
| BssECI | CCNNGG | 1 cut(s) | 854 |
| BssMI | GATC | 9 cut(s) | 6, 162, 423, 491, 499, 525, 595, 724, 935 |
| BssSI | CACGAG | 1 cut(s) | 621 |
| BssT1I | CCWWGG | 1 cut(s) | 854 |
| Bst2BI | CACGAG | 1 cut(s) | 621 |
| Bst2UI | CCWGG | 4 cut(s) | 433, 472, 687, 704 |
| Bst4CI | ACNGT | 6 cut(s) | 337, 389, 632, 840, 874, 896 |
| Bst6I | CTCTTC | 3 cut(s) | 120, 501, 750 |
| BstBAI | YACGTR | 1 cut(s) | 835 |
| BstC8I | GCNNGC | 5 cut(s) | 36, 40, 253, 570, 618 |
| BstDEI | CTNAG | 5 cut(s) | 18, 92, 207, 417, 1026 |
| BstF5I | GGATG | 2 cut(s) | 79, 381 |
| BstFNI | CGCG | 2 cut(s) | 104, 454 |
| BstHHI | GCGC | 1 cut(s) | 292 |
| BstKTI | GATC | 9 cut(s) | 9, 165, 426, 494, 502, 528, 598, 727, 938 |
| BstMAI | GTCTC | 2 cut(s) | 27, 326 |
| BstMBI | GATC | 9 cut(s) | 6, 162, 423, 491, 499, 525, 595, 724, 935 |
| BstMCI | CGRYCG | 1 cut(s) | 9 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 174 |
| BstNI | CCWGG | 4 cut(s) | 433, 472, 687, 704 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 579 |
| BstSCI | CCNGG | 4 cut(s) | 431, 470, 685, 702 |
| BstSFI | CTRYAG | 4 cut(s) | 256, 369, 566, 873 |
| BstSNI | TACGTA | 1 cut(s) | 835 |
| BstUI | CGCG | 2 cut(s) | 104, 454 |
| BstV1I | GCAGC | 4 cut(s) | 242, 304, 505, 946 |
| BstV2I | GAAGAC | 1 cut(s) | 405 |
| BstX2I | RGATCY | 1 cut(s) | 525 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 745 |
| BstYI | RGATCY | 1 cut(s) | 525 |
| BsuI | GTATCC | 1 cut(s) | 125 |
| BsuRI | GGCC | 3 cut(s) | 155, 451, 702 |
| BtgZI | GCGATG | 1 cut(s) | 85 |
| BtsCI | GGATG | 2 cut(s) | 79, 381 |
| BtsI | GCAGTG | 1 cut(s) | 889 |
| BtsIMutI | CAGTG | 3 cut(s) | 394, 870, 889 |
| Cac8I | GCNNGC | 5 cut(s) | 36, 40, 253, 570, 618 |
| CciI | TCATGA | 1 cut(s) | 862 |
| CfoI | GCGC | 1 cut(s) | 292 |
| CsiI | ACCWGGT | 1 cut(s) | 685 |
| Csp6I | GTAC | 7 cut(s) | 82, 445, 628, 836, 841, 932, 989 |
| CviAII | CATG | 2 cut(s) | 440, 863 |
| CviQI | GTAC | 7 cut(s) | 82, 445, 628, 836, 841, 932, 989 |
| DdeI | CTNAG | 5 cut(s) | 18, 92, 207, 417, 1026 |
| DpnI | GATC | 9 cut(s) | 8, 164, 425, 493, 501, 527, 597, 726, 937 |
| DpnII | GATC | 9 cut(s) | 6, 162, 423, 491, 499, 525, 595, 724, 935 |
| DriI | GACNNNNNGTC | 1 cut(s) | 19 |
| EaeI | YGGCCR | 1 cut(s) | 449 |
| Eam1104I | CTCTTC | 3 cut(s) | 120, 501, 750 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 19 |
| EarI | CTCTTC | 3 cut(s) | 120, 501, 750 |
| EciI | GGCGGA | 1 cut(s) | 776 |
| Ecl136II | GAGCTC | 1 cut(s) | 130 |
| Eco105I | TACGTA | 1 cut(s) | 835 |
| Eco130I | CCWWGG | 1 cut(s) | 854 |
| Eco24I | GRGCYC | 2 cut(s) | 132, 186 |
| Eco53kI | GAGCTC | 1 cut(s) | 130 |
| EcoICRI | GAGCTC | 1 cut(s) | 130 |
| EcoRII | CCWGG | 4 cut(s) | 431, 470, 685, 702 |
| EcoT14I | CCWWGG | 1 cut(s) | 854 |
| EcoT22I | ATGCAT | 1 cut(s) | 201 |
| EcoT38I | GRGCYC | 2 cut(s) | 132, 186 |
| ErhI | CCWWGG | 1 cut(s) | 854 |
| FaeI | CATG | 2 cut(s) | 443, 866 |
| FatI | CATG | 2 cut(s) | 439, 862 |
| FauI | CCCGC | 1 cut(s) | 43 |
| FauNDI | CATATG | 1 cut(s) | 678 |
| Fnu4HI | GCNGC | 6 cut(s) | 249, 256, 293, 452, 519, 960 |
| FokI | GGATG | 2 cut(s) | 86, 388 |
| FriOI | GRGCYC | 2 cut(s) | 132, 186 |
| Fsp4HI | GCNGC | 6 cut(s) | 249, 256, 293, 452, 519, 960 |
| FspBI | CTAG | 1 cut(s) | 119 |
| FspI | TGCGCA | 1 cut(s) | 291 |
| GlaI | GCGC | 1 cut(s) | 291 |
| GluI | GCNGC | 6 cut(s) | 249, 256, 293, 452, 519, 960 |
| GsuI | CTGGAG | 1 cut(s) | 783 |
| HaeIII | GGCC | 3 cut(s) | 155, 451, 702 |
| HapII | CCGG | 1 cut(s) | 189 |
| HhaI | GCGC | 1 cut(s) | 292 |
| Hin1II | CATG | 2 cut(s) | 443, 866 |
| Hin6I | GCGC | 1 cut(s) | 290 |
| HinP1I | GCGC | 1 cut(s) | 290 |
| HincII | GTYRAC | 2 cut(s) | 513, 584 |
| HindII | GTYRAC | 2 cut(s) | 513, 584 |
| HindIII | AAGCTT | 1 cut(s) | 481 |
| HinfI | GANTC | 4 cut(s) | 14, 20, 67, 379 |
| HpaI | GTTAAC | 1 cut(s) | 513 |
| HpaII | CCGG | 1 cut(s) | 189 |
| HphI | GGTGA | 1 cut(s) | 326 |
| Hpy166II | GTNNAC | 5 cut(s) | 235, 513, 584, 692, 870 |
| Hpy188I | TCNGA | 2 cut(s) | 19, 911 |
| Hpy188III | TCNNGA | 9 cut(s) | 26, 71, 133, 383, 503, 643, 800, 863, 946 |
| Hpy8I | GTNNAC | 5 cut(s) | 235, 513, 584, 692, 870 |
| Hpy99I | CGWCG | 1 cut(s) | 176 |
| HpyAV | CCTTC | 4 cut(s) | 145, 214, 778, 806 |
| HpyCH4III | ACNGT | 6 cut(s) | 337, 389, 632, 840, 874, 896 |
| HpyCH4IV | ACGT | 2 cut(s) | 601, 834 |
| HpyCH4V | TGCA | 6 cut(s) | 199, 258, 544, 551, 568, 882 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 174 |
| HpyF3I | CTNAG | 5 cut(s) | 18, 92, 207, 417, 1026 |
| HpySE526I | ACGT | 2 cut(s) | 601, 834 |
| Hsp92II | CATG | 2 cut(s) | 443, 866 |
| HspAI | GCGC | 1 cut(s) | 290 |
| KspAI | GTTAAC | 1 cut(s) | 513 |
| Kzo9I | GATC | 9 cut(s) | 6, 162, 423, 491, 499, 525, 595, 724, 935 |
| LguI | GCTCTTC | 1 cut(s) | 120 |
| LmnI | GCTCC | 1 cut(s) | 96 |
| Lsp1109I | GCAGC | 4 cut(s) | 242, 304, 505, 946 |
| LweI | GCATC | 1 cut(s) | 108 |
| MabI | ACCWGGT | 1 cut(s) | 685 |
| MaeI | CTAG | 1 cut(s) | 119 |
| MaeII | ACGT | 2 cut(s) | 601, 834 |
| MaeIII | GTNAC | 2 cut(s) | 435, 669 |
| MalI | GATC | 9 cut(s) | 8, 164, 425, 493, 501, 527, 597, 726, 937 |
| MboI | GATC | 9 cut(s) | 6, 162, 423, 491, 499, 525, 595, 724, 935 |
| MboII | GAAGA | 8 cut(s) | 134, 137, 277, 405, 518, 658, 761, 767 |
| MfeI | CAATTG | 1 cut(s) | 62 |
| MflI | RGATCY | 1 cut(s) | 525 |
| MhlI | GDGCHC | 3 cut(s) | 132, 186, 618 |
| MluCI | AATT | 4 cut(s) | 62, 136, 225, 917 |
| MlyI | GAGTC | 3 cut(s) | 8, 29, 76 |
| Mph1103I | ATGCAT | 1 cut(s) | 201 |
| MseI | TTAA | 3 cut(s) | 228, 512, 780 |
| MslI | CAYNNNNRTG | 1 cut(s) | 743 |
| MspI | CCGG | 1 cut(s) | 189 |
| MspR9I | CCNGG | 4 cut(s) | 433, 472, 687, 704 |
| MunI | CAATTG | 1 cut(s) | 62 |
| Mva1269I | GAATGC | 1 cut(s) | 201 |
| MvaI | CCWGG | 4 cut(s) | 433, 472, 687, 704 |
| MvnI | CGCG | 2 cut(s) | 104, 454 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 174 |
| NdeI | CATATG | 1 cut(s) | 678 |
| NdeII | GATC | 9 cut(s) | 6, 162, 423, 491, 499, 525, 595, 724, 935 |
| NlaIII | CATG | 2 cut(s) | 443, 866 |
| NmeAIII | GCCGAG | 1 cut(s) | 181 |
| NmuCI | GTSAC | 2 cut(s) | 435, 669 |
| NsbI | TGCGCA | 1 cut(s) | 291 |
| NsiI | ATGCAT | 1 cut(s) | 201 |
| PagI | TCATGA | 1 cut(s) | 862 |
| PciSI | GCTCTTC | 1 cut(s) | 120 |
| PctI | GAATGC | 1 cut(s) | 201 |
| PfeI | GAWTC | 1 cut(s) | 379 |
| Pfl23II | CGTACG | 1 cut(s) | 931 |
| PkrI | GCNGC | 6 cut(s) | 250, 257, 294, 453, 520, 961 |
| Ple19I | CGATCG | 1 cut(s) | 9 |
| PleI | GAGTC | 3 cut(s) | 8, 28, 75 |
| PpsI | GAGTC | 3 cut(s) | 8, 28, 75 |
| Ppu21I | YACGTR | 1 cut(s) | 835 |
| PshAI | GACNNNNGTC | 1 cut(s) | 579 |
| PshBI | ATTAAT | 1 cut(s) | 228 |
| Psp124BI | GAGCTC | 1 cut(s) | 132 |
| Psp6I | CCWGG | 4 cut(s) | 431, 470, 685, 702 |
| PspGI | CCWGG | 4 cut(s) | 431, 470, 685, 702 |
| PspLI | CGTACG | 1 cut(s) | 931 |
| PstI | CTGCAG | 2 cut(s) | 260, 570 |
| PsuI | RGATCY | 1 cut(s) | 525 |
| PvuI | CGATCG | 1 cut(s) | 9 |
| RsaI | GTAC | 7 cut(s) | 83, 446, 629, 837, 842, 933, 990 |
| RsaNI | GTAC | 7 cut(s) | 82, 445, 628, 836, 841, 932, 989 |
| RseI | CAYNNNNRTG | 1 cut(s) | 743 |
| SacI | GAGCTC | 1 cut(s) | 132 |
| SapI | GCTCTTC | 1 cut(s) | 120 |
| SaqAI | TTAA | 3 cut(s) | 228, 512, 780 |
| SatI | GCNGC | 6 cut(s) | 249, 256, 293, 452, 519, 960 |
| Sau3AI | GATC | 9 cut(s) | 6, 162, 423, 491, 499, 525, 595, 724, 935 |
| SbfI | CCTGCAGG | 1 cut(s) | 570 |
| ScaI | AGTACT | 2 cut(s) | 446, 629 |
| SchI | GAGTC | 3 cut(s) | 8, 29, 76 |
| ScrFI | CCNGG | 4 cut(s) | 433, 472, 687, 704 |
| SdaI | CCTGCAGG | 1 cut(s) | 570 |
| SduI | GDGCHC | 3 cut(s) | 132, 186, 618 |
| SexAI | ACCWGGT | 1 cut(s) | 685 |
| SfaNI | GCATC | 1 cut(s) | 108 |
| SfcI | CTRYAG | 4 cut(s) | 256, 369, 566, 873 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 743 |
| SmlI | CTYRAG | 2 cut(s) | 24, 131 |
| SmoI | CTYRAG | 2 cut(s) | 24, 131 |
| SnaBI | TACGTA | 1 cut(s) | 835 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 570 |
| Sse9I | AATT | 4 cut(s) | 62, 136, 225, 917 |
| SsiI | CCGC | 5 cut(s) | 36, 104, 249, 452, 761 |
| SspI | AATATT | 1 cut(s) | 1017 |
| SspMI | CTAG | 1 cut(s) | 119 |
| SstI | GAGCTC | 1 cut(s) | 132 |
| StyD4I | CCNGG | 4 cut(s) | 431, 470, 685, 702 |
| StyI | CCWWGG | 1 cut(s) | 854 |
| TaaI | ACNGT | 6 cut(s) | 337, 389, 632, 840, 874, 896 |
| TaiI | ACGT | 2 cut(s) | 604, 837 |
| TaqI | TCGA | 3 cut(s) | 5, 487, 810 |
| TasI | AATT | 4 cut(s) | 62, 136, 225, 917 |
| TatI | WGTACW | 2 cut(s) | 444, 627 |
| TauI | GCSGC | 2 cut(s) | 251, 454 |
| TfiI | GAWTC | 1 cut(s) | 379 |
| Tru1I | TTAA | 3 cut(s) | 228, 512, 780 |
| Tru9I | TTAA | 3 cut(s) | 228, 512, 780 |
| TscAI | CASTG | 3 cut(s) | 394, 877, 889 |
| TseFI | GTSAC | 2 cut(s) | 435, 669 |
| TseI | GCWGC | 4 cut(s) | 255, 292, 518, 959 |
| Tsp45I | GTSAC | 2 cut(s) | 435, 669 |
| TspDTI | ATGAA | 3 cut(s) | 392, 768, 851 |
| TspRI | CASTG | 3 cut(s) | 394, 877, 889 |
| VspI | ATTAAT | 1 cut(s) | 228 |
| XapI | RAATTY | 1 cut(s) | 136 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 683 |
| XspI | CTAG | 1 cut(s) | 119 |
| ZrmI | AGTACT | 2 cut(s) | 446, 629 |
| Zsp2I | ATGCAT | 1 cut(s) | 201 |