Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0000649

Physical Location & Seq

Genomic Coordinates Reverse (-)

61815103 .. 61819673

Gene Structure 4571 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000035152

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1125 bp

ATGGCAACCGAAGTACCGGAGCAAGTCCCTGCCGACGAAATCAAATCGATGTCGATCGCCGACTCTGAGTCGCAAGACCAGCCCGCAAGCTCGTCCAGTCCATCTGTCCAATTGAGTCTGGATGAGAGGTACAACCTACTTAGGAGCATCGCGGAGGAGTGTATCCTAGAAGAAGAGCTCAAGAATTTGCTGGATACGAAGGCCGAGCCGATCTGCTACGACGGCTTTGAGCCCTCCGGTAGAATGCATATTGCTCAGGGAGTTTTGAAGGCAATTAATGTGAACAAGATGATTGCCGCAGGCTGCAGAGTGAAGATATGGATTGCCGATTGGTTTGCGCAGCTAAACAATAAGATGGGGGGTGATTTGGACAAGATTGAGACTGTGGGGAAGTATTTTATTGAGATATGGAGGTCTGTGGGGATGAATCTGGACAGGGGGAAATTTGAGTTTTTGTGGTCTTCTAAGGAGATCAATGCCAGCTGTCACATGAGTATTGGCCGCGTGTGTAGTCAAATTATGGGTCGTACAGATCAAGAAGAGTTAACTGCTGCCCAGATCCTCTACCCGTGTATGCAATGCGCAGATATTTTCTTCCTGCAGGCTGACATCTGTCAACTCGGTATGGATCAACGTAAAGTGAATGTGCTCGCACGAGAGTACTGTGATGACATCAAGAAGAAAAACAAGCCTATTATCTTGTCTCACCATATGCTACCTGGTTTACAGCAAGGGCAGGAGAAAATGTCAAAAAGTGATCTATCCTCCTCCATATTTATGGAAGATGAAGAGGCGGAAGTGAATACAAAGATTAAGAAGGCTTACTGCCCTCCAGAAAAGGTCAAAGGCAATCCCAGTTTGGAATACGTACAGTACCTCATTTTTCCTTGGTTTCATGAGTTCACCGTAGAGTGCAGTGAAAAGAACGGTGGAGATGGGACTTTCAAAGAGTTTGAAGAATTGAGTGCTGCTTATGCAAAAGGTGAGGTCCATCCTGGAGACCTCAAACCATCTTTGGCAAAAGCATTGAATAGAATACTGGAGCCTGTACGATCCCATTTCAAGAATGACAAAGCTGCCAAACAGCTATTACAAAGTGTAAAGAATTATAGAGTCACTAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004812 GO:0004831 GO:0005488 GO:0005515 GO:0005524 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006437 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016597 GO:0016874 GO:0016875 GO:0017076 GO:0019538 GO:0019752 GO:0030554 GO:0031406 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0034645 GO:0034660 GO:0035639 GO:0036094 GO:0042802 GO:0042803 GO:0043038 GO:0043039 GO:0043043 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043177 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0046483 GO:0046983 GO:0071704 GO:0072545 GO:0090304 GO:0097159 GO:0097367 GO:0140098 GO:0140101 GO:1901265 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_1b

Protein Analysis

375

Amino Acids

42.27

Weight (kDa)

5.48

Isoelectric Point (pI)

58.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1b	PF00579	68 - 347	7.1e-54	tRNA synthetases class I (W and Y)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000649)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33840
fragaria_vesca	FvH4_2g00190 FvH4_4g18133 FvH4_4g36450 FvH4_5g02490 FvH4_5g35150 FvH4_6g35840
malus_domestica	MD04G1034100.v1.1 MD06G1084100.v1.1
prunus_persica	Prupe.2G139100_v2.0.a1 Prupe.5G096900_v2.0.a1 Prupe.5G096900_v2.0.a1 Prupe.5G100500_v2.0.a1 Prupe.5G100500_v2.0.a1 Prupe.5G100500_v2.0.a1
pyrus_communis	pycom04g02850
rosa_chinensis	RchiOBHm_Chr1g0324941 RchiOBHm_Chr1g0340751 RchiOBHm_Chr2g0133721 RchiOBHm_Chr2g0153921 RchiOBHm_Chr4g0396761 RchiOBHm_Chr4g0414291 RchiOBHm_Chr4g0429871 RchiOBHm_Chr4g0446211 RchiOBHm_Chr5g0057181 RchiOBHm_Chr5g0057391 RchiOBHm_Chr5g0077561 RchiOBHm_Chr6g0307121 RchiOBHm_Chr7g0197611
rosa_laevigata	RLG00000003922 RLG00000005681 RLG00000017313 RLG00000029149 RLG00000035152
rosa_multiflora	Rmu_co8043936.1_g000001 Rmu_sc0001164.1_g000009 Rmu_sc0001334.1_g000004 Rmu_sc0004952.1_g000011 Rmu_sc0013154.1_g000007 Rmu_sc0017650.1_g000006 Rmu_sc0018062.1_g000003
rosa_roxburghii	Rroxscaffold_1G00023030 Rroxscaffold_2G00094650 Rroxscaffold_3G00223000 Rroxscaffold_3G00232150 Rroxscaffold_3G00248030 Rroxscaffold_3G00248040 Rroxscaffold_3G00258320
rosa_rugosa	Rorug04G0184600 Rorug04G0368500 Rorug05G0306000 Rorug05G0307100 Rorug07G0041900
rosa_samantha	Rh2CG164400 Rh2DG389300 Rh3AG306800 Rh4AG430600 Rh4BG440000 Rh4CG457300 Rh4DG438500 Rh5AG375500 Rh5BG386300 Rh5CG409700 Rh5DG400300 Rh6CG481100 Rh7AG166300 Rh7AG360600 Rh7BG168400 Rh7CG174700 Rh7DG168000 Rh7DG387600
rosa_wichuraiana	Rw2G022790 Rw4G036780 Rw5G035320 Rw5G035460 Rw7G014480 Rw7G038030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	339, 583
AccII	CGCG	2 cut(s)	152, 504
AciI	CCGC	5 cut(s)	84, 152, 297, 502, 794
AclWI	GGATC	3 cut(s)	553, 636, 1047
AcoI	YGGCCR	1 cut(s)	499
AcsI	RAATTY	2 cut(s)	184, 443
AfaI	GTAC	7 cut(s)	15, 131, 529, 662, 870, 875, 1050
AgsI	TTSAA	5 cut(s)	268, 946, 956, 1030, 1063
AhdI	GACNNNNNGTC	1 cut(s)	67
AjnI	CCWGG	2 cut(s)	718, 994
AluBI	AGCT	6 cut(s)	90, 178, 343, 483, 1076, 1087
AluI	AGCT	6 cut(s)	90, 178, 343, 483, 1076, 1087
Alw21I	GWGCWC	2 cut(s)	180, 651
Alw26I	GTCTC	3 cut(s)	374, 708, 993
AlwI	GGATC	3 cut(s)	553, 636, 1047
AoxI	GGCC	2 cut(s)	201, 499
ApeKI	GCWGC	5 cut(s)	303, 340, 551, 968, 1076
ApoI	RAATTY	2 cut(s)	184, 443
ArsI	GACNNNNNNTTYG	2 cut(s)	508, 540
AseI	ATTAAT	1 cut(s)	276
AspLEI	GCGC	2 cut(s)	340, 584
AspS9I	GGNCC	1 cut(s)	988
AsuHPI	GGTGA	4 cut(s)	374, 698, 895, 995
AvaII	GGWCC	1 cut(s)	988
BaeI	ACNNNNGTAYC	1 cut(s)	30
BanII	GRGCYC	2 cut(s)	180, 234
BauI	CACGAG	1 cut(s)	654
BbsI	GAAGAC	1 cut(s)	453
Bbv12I	GWGCWC	2 cut(s)	180, 651
BbvI	GCAGC	5 cut(s)	290, 352, 538, 955, 1063
BccI	CCATC	5 cut(s)	109, 349, 929, 999, 1018
BceAI	ACGGC	1 cut(s)	238
BcgI	CGANNNNNNTGC	2 cut(s)	317, 351
BciT130I	CCWGG	2 cut(s)	720, 996
BciVI	GTATCC	2 cut(s)	173, 187
BcoDI	GTCTC	3 cut(s)	374, 708, 993
BfaI	CTAG	2 cut(s)	167, 1119
BfmI	CTRYAG	2 cut(s)	304, 599
BfuI	GTATCC	2 cut(s)	173, 187
BisI	GCNGC	7 cut(s)	297, 304, 341, 502, 552, 969, 1077
BlsI	GCNGC	7 cut(s)	298, 305, 342, 503, 553, 970, 1078
BmcAI	AGTACT	1 cut(s)	662
Bme1390I	CCNGG	2 cut(s)	720, 996
Bme18I	GGWCC	1 cut(s)	988
BmeRI	GACNNNNNGTC	1 cut(s)	67
BmgT120I	GGNCC	1 cut(s)	988
BmiI	GGNNCC	1 cut(s)	1044
BmrFI	CCNGG	2 cut(s)	720, 996
BmrI	ACTGGG	1 cut(s)	849
BmsI	GCATC	1 cut(s)	156
BmuI	ACTGGG	1 cut(s)	849
BoxI	GACNNNNGTC	1 cut(s)	612
BpiI	GAAGAC	1 cut(s)	453
BpmI	CTGGAG	3 cut(s)	816, 1017, 1061
Bpu10I	CCTNAGC	1 cut(s)	255
BpuEI	CTTGAG	1 cut(s)	164
Bsa29I	ATCGAT	1 cut(s)	47
BsaAI	YACGTR	1 cut(s)	868
BsaBI	GATNNNNATC	1 cut(s)	53
BsaI	GGTCTC	1 cut(s)	993
BsaJI	CCNNGG	1 cut(s)	887
BsaWI	WCCGGW	2 cut(s)	16, 236
BsaXI	ACNNNNNCTCC	2 cut(s)	731, 761
Bse1I	ACTGG	3 cut(s)	96, 855, 1044
Bse3DI	GCAATG	1 cut(s)	584
Bse8I	GATNNNNATC	1 cut(s)	53
BseBI	CCWGG	2 cut(s)	720, 996
BseCI	ATCGAT	1 cut(s)	47
BseDI	CCNNGG	1 cut(s)	887
BseGI	GGATG	3 cut(s)	127, 429, 991
BseJI	GATNNNNATC	1 cut(s)	53
BseMI	GCAATG	1 cut(s)	584
BseMII	CTCAG	2 cut(s)	57, 269
BseNI	ACTGG	3 cut(s)	96, 855, 1044
BseRI	GAGGAG	2 cut(s)	170, 757
BseXI	GCAGC	5 cut(s)	290, 352, 538, 955, 1063
BsgI	GTGCAG	1 cut(s)	934
Bsh1236I	CGCG	2 cut(s)	152, 504
Bsh1285I	CGRYCG	1 cut(s)	57
BshFI	GGCC	2 cut(s)	203, 501
BshVI	ATCGAT	1 cut(s)	47
BsiEI	CGRYCG	1 cut(s)	57
BsiHKAI	GWGCWC	2 cut(s)	180, 651
BsiSI	CCGG	2 cut(s)	17, 237
BslFI	GGGAC	2 cut(s)	11, 952
BsmAI	GTCTC	3 cut(s)	374, 708, 993
BsmFI	GGGAC	2 cut(s)	11, 952
BsmI	GAATGC	1 cut(s)	249
BsnI	GGCC	2 cut(s)	203, 501
Bso31I	GGTCTC	1 cut(s)	993
Bsp1286I	GDGCHC	3 cut(s)	180, 234, 651
Bsp143I	GATC	8 cut(s)	54, 210, 471, 532, 558, 628, 757, 1052
BspACI	CCGC	5 cut(s)	84, 152, 297, 502, 794
BspANI	GGCC	2 cut(s)	203, 501
BspCNI	CTCAG	2 cut(s)	58, 268
BspDI	ATCGAT	1 cut(s)	47
BspFNI	CGCG	2 cut(s)	152, 504
BspHI	TCATGA	1 cut(s)	895
BspLI	GGNNCC	1 cut(s)	1044
BspMAI	CTGCAG	2 cut(s)	308, 603
BspPI	GGATC	3 cut(s)	553, 636, 1047
BspQI	GCTCTTC	1 cut(s)	168
BspTNI	GGTCTC	1 cut(s)	993
BsrDI	GCAATG	1 cut(s)	584
BsrI	ACTGG	3 cut(s)	96, 855, 1044
BssECI	CCNNGG	1 cut(s)	887
BssMI	GATC	8 cut(s)	54, 210, 471, 532, 558, 628, 757, 1052
BssSI	CACGAG	1 cut(s)	654
BssT1I	CCWWGG	1 cut(s)	887
Bst2BI	CACGAG	1 cut(s)	654
Bst2UI	CCWGG	2 cut(s)	720, 996
Bst4CI	ACNGT	5 cut(s)	385, 665, 873, 907, 929
Bst6I	CTCTTC	3 cut(s)	168, 534, 783
BstBAI	YACGTR	1 cut(s)	868
BstC8I	GCNNGC	6 cut(s)	84, 88, 301, 481, 603, 651
BstDEI	CTNAG	4 cut(s)	66, 140, 255, 465
BstF5I	GGATG	3 cut(s)	127, 429, 991
BstFNI	CGCG	2 cut(s)	152, 504
BstHHI	GCGC	2 cut(s)	340, 584
BstKTI	GATC	8 cut(s)	57, 213, 474, 535, 561, 631, 760, 1055
BstMAI	GTCTC	3 cut(s)	374, 708, 993
BstMBI	GATC	8 cut(s)	54, 210, 471, 532, 558, 628, 757, 1052
BstMCI	CGRYCG	1 cut(s)	57
BstMWI	GCNNNNNNNGC	3 cut(s)	79, 222, 974
BstNI	CCWGG	2 cut(s)	720, 996
BstPAI	GACNNNNGTC	1 cut(s)	612
BstSCI	CCNGG	2 cut(s)	718, 994
BstSFI	CTRYAG	2 cut(s)	304, 599
BstSNI	TACGTA	1 cut(s)	868
BstUI	CGCG	2 cut(s)	152, 504
BstV1I	GCAGC	5 cut(s)	290, 352, 538, 955, 1063
BstV2I	GAAGAC	1 cut(s)	453
BstX2I	RGATCY	1 cut(s)	558
BstXI	CCANNNNNNTGG	1 cut(s)	778
BstYI	RGATCY	1 cut(s)	558
Bsu15I	ATCGAT	1 cut(s)	47
BsuI	GTATCC	2 cut(s)	173, 187
BsuRI	GGCC	2 cut(s)	203, 501
BsuTUI	ATCGAT	1 cut(s)	47
BtgZI	GCGATG	1 cut(s)	133
BtsCI	GGATG	3 cut(s)	127, 429, 991
BtsI	GCAGTG	1 cut(s)	922
BtsIMutI	CAGTG	1 cut(s)	922
Cac8I	GCNNGC	6 cut(s)	84, 88, 301, 481, 603, 651
CciI	TCATGA	1 cut(s)	895
CfoI	GCGC	2 cut(s)	340, 584
Cfr13I	GGNCC	1 cut(s)	988
ClaI	ATCGAT	1 cut(s)	47
CsiI	ACCWGGT	1 cut(s)	718
Csp6I	GTAC	7 cut(s)	14, 130, 528, 661, 869, 874, 1049
CviAII	CATG	2 cut(s)	490, 896
CviQI	GTAC	7 cut(s)	14, 130, 528, 661, 869, 874, 1049
DdeI	CTNAG	4 cut(s)	66, 140, 255, 465
DpnI	GATC	8 cut(s)	56, 212, 473, 534, 560, 630, 759, 1054
DpnII	GATC	8 cut(s)	54, 210, 471, 532, 558, 628, 757, 1052
DriI	GACNNNNNGTC	1 cut(s)	67
EaeI	YGGCCR	1 cut(s)	499
Eam1104I	CTCTTC	3 cut(s)	168, 534, 783
Eam1105I	GACNNNNNGTC	1 cut(s)	67
EarI	CTCTTC	3 cut(s)	168, 534, 783
EciI	GGCGGA	1 cut(s)	809
Ecl136II	GAGCTC	1 cut(s)	178
Eco105I	TACGTA	1 cut(s)	868
Eco130I	CCWWGG	1 cut(s)	887
Eco24I	GRGCYC	2 cut(s)	180, 234
Eco31I	GGTCTC	1 cut(s)	993
Eco47I	GGWCC	1 cut(s)	988
Eco53kI	GAGCTC	1 cut(s)	178
EcoICRI	GAGCTC	1 cut(s)	178
EcoRII	CCWGG	2 cut(s)	718, 994
EcoT14I	CCWWGG	1 cut(s)	887
EcoT22I	ATGCAT	1 cut(s)	249
EcoT38I	GRGCYC	2 cut(s)	180, 234
ErhI	CCWWGG	1 cut(s)	887
FaeI	CATG	2 cut(s)	493, 899
FaqI	GGGAC	2 cut(s)	11, 952
FatI	CATG	2 cut(s)	489, 895
FauI	CCCGC	1 cut(s)	91
FauNDI	CATATG	1 cut(s)	711
Fnu4HI	GCNGC	7 cut(s)	297, 304, 341, 502, 552, 969, 1077
FokI	GGATG	3 cut(s)	134, 436, 978
FriOI	GRGCYC	2 cut(s)	180, 234
Fsp4HI	GCNGC	7 cut(s)	297, 304, 341, 502, 552, 969, 1077
FspBI	CTAG	2 cut(s)	167, 1119
FspI	TGCGCA	2 cut(s)	339, 583
GlaI	GCGC	2 cut(s)	339, 583
GluI	GCNGC	7 cut(s)	297, 304, 341, 502, 552, 969, 1077
GsuI	CTGGAG	3 cut(s)	816, 1017, 1061
HaeIII	GGCC	2 cut(s)	203, 501
HapII	CCGG	2 cut(s)	17, 237
HhaI	GCGC	2 cut(s)	340, 584
Hin1II	CATG	2 cut(s)	493, 899
Hin6I	GCGC	2 cut(s)	338, 582
HinP1I	GCGC	2 cut(s)	338, 582
HincII	GTYRAC	2 cut(s)	546, 617
HindII	GTYRAC	2 cut(s)	546, 617
HinfI	GANTC	5 cut(s)	62, 68, 115, 427, 1113
HpaI	GTTAAC	1 cut(s)	546
HpaII	CCGG	2 cut(s)	17, 237
HphI	GGTGA	4 cut(s)	374, 698, 895, 995
Hpy166II	GTNNAC	5 cut(s)	283, 546, 617, 725, 903
Hpy188I	TCNGA	1 cut(s)	67
Hpy188III	TCNNGA	8 cut(s)	119, 181, 431, 536, 676, 833, 896, 1063
Hpy8I	GTNNAC	5 cut(s)	283, 546, 617, 725, 903
Hpy99I	CGWCG	2 cut(s)	38, 224
HpyAV	CCTTC	3 cut(s)	193, 262, 811
HpyCH4III	ACNGT	5 cut(s)	385, 665, 873, 907, 929
HpyCH4IV	ACGT	2 cut(s)	634, 867
HpyCH4V	TGCA	6 cut(s)	247, 306, 577, 601, 915, 977
HpyF10VI	GCNNNNNNNGC	3 cut(s)	79, 222, 974
HpyF3I	CTNAG	4 cut(s)	66, 140, 255, 465
HpySE526I	ACGT	2 cut(s)	634, 867
Hsp92II	CATG	2 cut(s)	493, 899
HspAI	GCGC	2 cut(s)	338, 582
KspAI	GTTAAC	1 cut(s)	546
Kzo9I	GATC	8 cut(s)	54, 210, 471, 532, 558, 628, 757, 1052
LguI	GCTCTTC	1 cut(s)	168
LmnI	GCTCC	3 cut(s)	19, 144, 1042
Lsp1109I	GCAGC	5 cut(s)	290, 352, 538, 955, 1063
LweI	GCATC	1 cut(s)	156
MabI	ACCWGGT	1 cut(s)	718
MaeI	CTAG	2 cut(s)	167, 1119
MaeII	ACGT	2 cut(s)	634, 867
MaeIII	GTNAC	2 cut(s)	485, 1114
MalI	GATC	8 cut(s)	56, 212, 473, 534, 560, 630, 759, 1054
MboI	GATC	8 cut(s)	54, 210, 471, 532, 558, 628, 757, 1052
MfeI	CAATTG	1 cut(s)	110
MflI	RGATCY	1 cut(s)	558
MhlI	GDGCHC	3 cut(s)	180, 234, 651
MluCI	AATT	7 cut(s)	110, 184, 273, 443, 516, 959, 1105
MlyI	GAGTC	4 cut(s)	56, 77, 124, 1122
Mph1103I	ATGCAT	1 cut(s)	249
MseI	TTAA	3 cut(s)	276, 545, 813
MslI	CAYNNNNRTG	1 cut(s)	776
MspA1I	CMGCKG	1 cut(s)	483
MspI	CCGG	2 cut(s)	17, 237
MspR9I	CCNGG	2 cut(s)	720, 996
MunI	CAATTG	1 cut(s)	110
Mva1269I	GAATGC	1 cut(s)	249
MvaI	CCWGG	2 cut(s)	720, 996
MvnI	CGCG	2 cut(s)	152, 504
MwoI	GCNNNNNNNGC	3 cut(s)	79, 222, 974
NdeI	CATATG	1 cut(s)	711
NdeII	GATC	8 cut(s)	54, 210, 471, 532, 558, 628, 757, 1052
NlaIII	CATG	2 cut(s)	493, 899
NlaIV	GGNNCC	1 cut(s)	1044
NmeAIII	GCCGAG	1 cut(s)	229
NmuCI	GTSAC	2 cut(s)	485, 1114
NsbI	TGCGCA	2 cut(s)	339, 583
NsiI	ATGCAT	1 cut(s)	249
PagI	TCATGA	1 cut(s)	895
PciSI	GCTCTTC	1 cut(s)	168
PctI	GAATGC	1 cut(s)	249
PfeI	GAWTC	1 cut(s)	427
PfoI	TCCNGGA	1 cut(s)	994
PkrI	GCNGC	7 cut(s)	298, 305, 342, 503, 553, 970, 1078
Ple19I	CGATCG	1 cut(s)	57
PleI	GAGTC	4 cut(s)	56, 76, 123, 1121
PpsI	GAGTC	4 cut(s)	56, 76, 123, 1121
Ppu21I	YACGTR	1 cut(s)	868
PshAI	GACNNNNGTC	1 cut(s)	612
PshBI	ATTAAT	1 cut(s)	276
Psp124BI	GAGCTC	1 cut(s)	180
Psp6I	CCWGG	2 cut(s)	718, 994
PspGI	CCWGG	2 cut(s)	718, 994
PspN4I	GGNNCC	1 cut(s)	1044
PspPI	GGNCC	1 cut(s)	988
PstI	CTGCAG	2 cut(s)	308, 603
PsuI	RGATCY	1 cut(s)	558
PvuI	CGATCG	1 cut(s)	57
PvuII	CAGCTG	1 cut(s)	483
RsaI	GTAC	7 cut(s)	15, 131, 529, 662, 870, 875, 1050
RsaNI	GTAC	7 cut(s)	14, 130, 528, 661, 869, 874, 1049
RseI	CAYNNNNRTG	1 cut(s)	776
SacI	GAGCTC	1 cut(s)	180
SapI	GCTCTTC	1 cut(s)	168
SaqAI	TTAA	3 cut(s)	276, 545, 813
SatI	GCNGC	7 cut(s)	297, 304, 341, 502, 552, 969, 1077
Sau3AI	GATC	8 cut(s)	54, 210, 471, 532, 558, 628, 757, 1052
Sau96I	GGNCC	1 cut(s)	988
SbfI	CCTGCAGG	1 cut(s)	603
ScaI	AGTACT	1 cut(s)	662
SchI	GAGTC	4 cut(s)	56, 77, 124, 1122
ScrFI	CCNGG	2 cut(s)	720, 996
SdaI	CCTGCAGG	1 cut(s)	603
SduI	GDGCHC	3 cut(s)	180, 234, 651
SexAI	ACCWGGT	1 cut(s)	718
SfaNI	GCATC	1 cut(s)	156
SfcI	CTRYAG	2 cut(s)	304, 599
SinI	GGWCC	1 cut(s)	988
SmiMI	CAYNNNNRTG	1 cut(s)	776
SmlI	CTYRAG	1 cut(s)	179
SmoI	CTYRAG	1 cut(s)	179
SnaBI	TACGTA	1 cut(s)	868
Sse8387I	CCTGCAGG	1 cut(s)	603
Sse9I	AATT	7 cut(s)	110, 184, 273, 443, 516, 959, 1105
SsiI	CCGC	5 cut(s)	84, 152, 297, 502, 794
SspMI	CTAG	2 cut(s)	167, 1119
SstI	GAGCTC	1 cut(s)	180
StyD4I	CCNGG	2 cut(s)	718, 994
StyI	CCWWGG	1 cut(s)	887
TaaI	ACNGT	5 cut(s)	385, 665, 873, 907, 929
TaiI	ACGT	2 cut(s)	637, 870
TaqI	TCGA	2 cut(s)	47, 53
TasI	AATT	7 cut(s)	110, 184, 273, 443, 516, 959, 1105
TatI	WGTACW	1 cut(s)	660
TauI	GCSGC	2 cut(s)	299, 504
TfiI	GAWTC	1 cut(s)	427
Tru1I	TTAA	3 cut(s)	276, 545, 813
Tru9I	TTAA	3 cut(s)	276, 545, 813
TscAI	CASTG	1 cut(s)	922
TseFI	GTSAC	2 cut(s)	485, 1114
TseI	GCWGC	5 cut(s)	303, 340, 551, 968, 1076
Tsp45I	GTSAC	2 cut(s)	485, 1114
TspDTI	ATGAA	3 cut(s)	440, 801, 884
TspRI	CASTG	1 cut(s)	922
VpaK11BI	GGWCC	1 cut(s)	988
VspI	ATTAAT	1 cut(s)	276
XapI	RAATTY	2 cut(s)	184, 443
XcmI	CCANNNNNNNNNTGG	1 cut(s)	716
XspI	CTAG	2 cut(s)	167, 1119
ZrmI	AGTACT	1 cut(s)	662
Zsp2I	ATGCAT	1 cut(s)	249

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.