Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000649

Physical Location & Seq

Genomic Coordinates Reverse (-)

61047142 .. 61050501

Gene Structure 3360 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G035320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1179 bp

ATGGCAACCGAAGTACCGGAGCAAGTCCCTGACGACGAAATCAAATCGATGTCGATCGCCAACTCTGAGTCGCAAGACCAGCCCGCAAGCTCGTCCAGTCCATCTGTCCAATTGAGTCTGGATGAGAGGTACAACCTACTTAGGAGCATCGCGGAGGAGTGTATCCTAGAAGAAGAGCTCAAGAATTTGCTGGATAAGAAGGCCGAGCCGATCTGCTACGACGGCTTTGAGCCCTCCGGTAGAATGCATATTGCTCAGGGAGTTTTGAAGGCAATTAATGTGAACAAGATGATTGCCGCAGGCTGCAGAGTGAAGATATGGATTGCCGATTGGTTTGCGCAGCTAAACAATAAGATGGGGGGTGATTTGAACAAGATTGAGACTGTGGGGAAGTATTTTCTTGAGATATGGAGGTCTGTGGGGATGAATCTGGACAGTGGGAAAGTTGAGTTTTTGTGGTCTTCTAAGGAGATCAATGCCAGGTCACATGAGAACTGGCCGCGTGTAATGGATATTGCCAGGAAAAACAAGCTTTCGAGGATCATTAGGTGTAGTCAAATTATGGGTCGTACAGATCAAGAAGAGTTAACTGCTGCCCAGATCCTCTACCCGTGTATGCAATGTGCAGATATTTTCTTCCTGCAGGCTGACATCTGTCAACTCGGTATGGATCAACGTAAAGTGAATGTGCTCGCACGAGAGTACTGTGATGACATCAAGAAGAAAAACAAGCCTATTATCTTGTCACACCATATGCTACCTGGTTTACAGCAAGGGCAGGAGAAAATGTCAAAAAGTGATCTATCCTCCTCCATATTTATGGAAGATGAAGAGGTGGGTTGGCGCGCGGAAGTGAATACAAAGATTAAGAAGGCTTACTGCCCTCCAGAAAAGGTCGAAGACAATCCCTGTTTGGAATACTTACAGTACCTAATTTTTCCTTGGTTTCATGAGTTCACCGTAGAGTGCAGTGAAAAGAACGGTGGAGATAGCACTTTCAAAGAGTTTGAAGAATTGAGTGCTGCTTATGCAAAAGGTGAGGTCCATCCTGGAGACCTCAAACCATCTCTGGCAAAAGCATTGAATAGAATACTCGAGCCTGTACGATCGCATTTCAATAATGACAAAGCTGCCAAACAGCTATTACAAAGTGTAAAGAATTATAGAGTCACCAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004812 GO:0004831 GO:0005488 GO:0005515 GO:0005524 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006437 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016597 GO:0016874 GO:0016875 GO:0017076 GO:0019538 GO:0019752 GO:0030554 GO:0031406 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0034645 GO:0034660 GO:0035639 GO:0036094 GO:0042802 GO:0042803 GO:0043038 GO:0043039 GO:0043043 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043177 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0046483 GO:0046983 GO:0071704 GO:0072545 GO:0090304 GO:0097159 GO:0097367 GO:0140098 GO:0140101 GO:1901265 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_1b

Protein Analysis

392

Amino Acids

44.71

Weight (kDa)

5.69

Isoelectric Point (pI)

57.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1b	PF00579	67 - 365	6.9e-59	tRNA synthetases class I (W and Y)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000649)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33840
fragaria_vesca	FvH4_2g00190 FvH4_4g18133 FvH4_4g36450 FvH4_5g02490 FvH4_5g35150 FvH4_6g35840
malus_domestica	MD04G1034100.v1.1 MD06G1084100.v1.1
prunus_persica	Prupe.2G139100_v2.0.a1 Prupe.5G096900_v2.0.a1 Prupe.5G096900_v2.0.a1 Prupe.5G100500_v2.0.a1 Prupe.5G100500_v2.0.a1 Prupe.5G100500_v2.0.a1
pyrus_communis	pycom04g02850
rosa_chinensis	RchiOBHm_Chr1g0324941 RchiOBHm_Chr1g0340751 RchiOBHm_Chr2g0133721 RchiOBHm_Chr2g0153921 RchiOBHm_Chr4g0396761 RchiOBHm_Chr4g0414291 RchiOBHm_Chr4g0429871 RchiOBHm_Chr4g0446211 RchiOBHm_Chr5g0057181 RchiOBHm_Chr5g0057391 RchiOBHm_Chr5g0077561 RchiOBHm_Chr6g0307121 RchiOBHm_Chr7g0197611
rosa_laevigata	RLG00000003922 RLG00000005681 RLG00000017313 RLG00000029149 RLG00000035152
rosa_multiflora	Rmu_co8043936.1_g000001 Rmu_sc0001164.1_g000009 Rmu_sc0001334.1_g000004 Rmu_sc0004952.1_g000011 Rmu_sc0013154.1_g000007 Rmu_sc0017650.1_g000006 Rmu_sc0018062.1_g000003
rosa_roxburghii	Rroxscaffold_1G00023030 Rroxscaffold_2G00094650 Rroxscaffold_3G00223000 Rroxscaffold_3G00232150 Rroxscaffold_3G00248030 Rroxscaffold_3G00248040 Rroxscaffold_3G00258320
rosa_rugosa	Rorug04G0184600 Rorug04G0368500 Rorug05G0306000 Rorug05G0307100 Rorug07G0041900
rosa_samantha	Rh2CG164400 Rh2DG389300 Rh3AG306800 Rh4AG430600 Rh4BG440000 Rh4CG457300 Rh4DG438500 Rh5AG375500 Rh5BG386300 Rh5CG409700 Rh5DG400300 Rh6CG481100 Rh7AG166300 Rh7AG360600 Rh7BG168400 Rh7CG174700 Rh7DG168000 Rh7DG387600
rosa_wichuraiana	Rw2G022790 Rw4G036780 Rw5G035320 Rw5G035460 Rw7G014480 Rw7G038030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	339
AccII	CGCG	4 cut(s)	152, 502, 846, 848
AciI	CCGC	5 cut(s)	84, 152, 297, 500, 848
AclWI	GGATC	3 cut(s)	548, 595, 678
AcoI	YGGCCR	1 cut(s)	497
AcsI	RAATTY	1 cut(s)	184
AfaI	GTAC	6 cut(s)	15, 131, 571, 704, 929, 1104
AgsI	TTSAA	6 cut(s)	268, 370, 1000, 1010, 1084, 1117
AjnI	CCWGG	4 cut(s)	479, 518, 760, 1048
AluBI	AGCT	6 cut(s)	90, 178, 343, 532, 1130, 1141
AluI	AGCT	6 cut(s)	90, 178, 343, 532, 1130, 1141
Alw21I	GWGCWC	2 cut(s)	180, 693
Alw26I	GTCTC	2 cut(s)	374, 1047
AlwI	GGATC	3 cut(s)	548, 595, 678
Ama87I	CYCGRG	1 cut(s)	1094
AoxI	GGCC	2 cut(s)	201, 497
ApeKI	GCWGC	5 cut(s)	303, 340, 593, 1022, 1130
ApoI	RAATTY	1 cut(s)	184
ArsI	GACNNNNNNTTYG	2 cut(s)	550, 582
AseI	ATTAAT	1 cut(s)	276
AspLEI	GCGC	3 cut(s)	340, 846, 848
AspS9I	GGNCC	1 cut(s)	1042
AsuHPI	GGTGA	4 cut(s)	374, 949, 1049, 1162
AvaI	CYCGRG	1 cut(s)	1094
AvaII	GGWCC	1 cut(s)	1042
BaeI	ACNNNNGTAYC	1 cut(s)	30
BanII	GRGCYC	2 cut(s)	180, 234
BauI	CACGAG	1 cut(s)	696
BbsI	GAAGAC	2 cut(s)	453, 906
Bbv12I	GWGCWC	2 cut(s)	180, 693
BbvI	GCAGC	5 cut(s)	290, 352, 580, 1009, 1117
BccI	CCATC	4 cut(s)	109, 349, 1053, 1072
BceAI	ACGGC	1 cut(s)	238
BcgI	CGANNNNNNTGC	2 cut(s)	317, 351
BciT130I	CCWGG	4 cut(s)	481, 520, 762, 1050
BciVI	GTATCC	1 cut(s)	173
BcoDI	GTCTC	2 cut(s)	374, 1047
BfaI	CTAG	1 cut(s)	167
BfmI	CTRYAG	2 cut(s)	304, 641
BfuI	GTATCC	1 cut(s)	173
BisI	GCNGC	7 cut(s)	297, 304, 341, 500, 594, 1023, 1131
BlsI	GCNGC	7 cut(s)	298, 305, 342, 501, 595, 1024, 1132
BmcAI	AGTACT	1 cut(s)	704
Bme1390I	CCNGG	4 cut(s)	481, 520, 762, 1050
Bme18I	GGWCC	1 cut(s)	1042
BmeT110I	CYCGRG	1 cut(s)	1094
BmgT120I	GGNCC	1 cut(s)	1042
BmrFI	CCNGG	4 cut(s)	481, 520, 762, 1050
BmsI	GCATC	1 cut(s)	156
BoxI	GACNNNNGTC	1 cut(s)	654
BpiI	GAAGAC	2 cut(s)	453, 906
BpmI	CTGGAG	2 cut(s)	870, 1071
Bpu10I	CCTNAGC	1 cut(s)	255
BpuEI	CTTGAG	2 cut(s)	164, 422
Bsa29I	ATCGAT	1 cut(s)	47
BsaBI	GATNNNNATC	1 cut(s)	53
BsaI	GGTCTC	1 cut(s)	1047
BsaJI	CCNNGG	1 cut(s)	941
BsaWI	WCCGGW	2 cut(s)	16, 236
BsaXI	ACNNNNNCTCC	2 cut(s)	773, 803
Bse1I	ACTGG	2 cut(s)	96, 500
Bse3DI	GCAATG	1 cut(s)	626
Bse8I	GATNNNNATC	1 cut(s)	53
BseBI	CCWGG	4 cut(s)	481, 520, 762, 1050
BseCI	ATCGAT	1 cut(s)	47
BseDI	CCNNGG	1 cut(s)	941
BseGI	GGATG	3 cut(s)	127, 429, 1045
BseJI	GATNNNNATC	1 cut(s)	53
BseMI	GCAATG	1 cut(s)	626
BseMII	CTCAG	2 cut(s)	57, 269
BseNI	ACTGG	2 cut(s)	96, 500
BsePI	GCGCGC	1 cut(s)	844
BseRI	GAGGAG	2 cut(s)	170, 799
BseXI	GCAGC	5 cut(s)	290, 352, 580, 1009, 1117
BsgI	GTGCAG	2 cut(s)	645, 988
Bsh1236I	CGCG	4 cut(s)	152, 502, 846, 848
Bsh1285I	CGRYCG	2 cut(s)	57, 1109
BshFI	GGCC	2 cut(s)	203, 499
BshVI	ATCGAT	1 cut(s)	47
BsiEI	CGRYCG	2 cut(s)	57, 1109
BsiHKAI	GWGCWC	2 cut(s)	180, 693
BsiHKCI	CYCGRG	1 cut(s)	1094
BsiSI	CCGG	2 cut(s)	17, 237
BslFI	GGGAC	1 cut(s)	11
BsmAI	GTCTC	2 cut(s)	374, 1047
BsmFI	GGGAC	1 cut(s)	11
BsmI	GAATGC	1 cut(s)	249
BsnI	GGCC	2 cut(s)	203, 499
Bso31I	GGTCTC	1 cut(s)	1047
BsoBI	CYCGRG	1 cut(s)	1094
Bsp1286I	GDGCHC	3 cut(s)	180, 234, 693
Bsp143I	GATC	9 cut(s)	54, 210, 471, 540, 574, 600, 670, 799, 1106
BspACI	CCGC	5 cut(s)	84, 152, 297, 500, 848
BspANI	GGCC	2 cut(s)	203, 499
BspCNI	CTCAG	2 cut(s)	58, 268
BspDI	ATCGAT	1 cut(s)	47
BspFNI	CGCG	4 cut(s)	152, 502, 846, 848
BspHI	TCATGA	1 cut(s)	949
BspMAI	CTGCAG	2 cut(s)	308, 645
BspPI	GGATC	3 cut(s)	548, 595, 678
BspQI	GCTCTTC	1 cut(s)	168
BspTNI	GGTCTC	1 cut(s)	1047
BsrDI	GCAATG	1 cut(s)	626
BsrI	ACTGG	2 cut(s)	96, 500
BssECI	CCNNGG	1 cut(s)	941
BssHII	GCGCGC	1 cut(s)	844
BssMI	GATC	9 cut(s)	54, 210, 471, 540, 574, 600, 670, 799, 1106
BssSI	CACGAG	1 cut(s)	696
BssT1I	CCWWGG	1 cut(s)	941
Bst2BI	CACGAG	1 cut(s)	696
Bst2UI	CCWGG	4 cut(s)	481, 520, 762, 1050
Bst4CI	ACNGT	6 cut(s)	385, 437, 707, 927, 961, 983
Bst6I	CTCTTC	3 cut(s)	168, 576, 825
BstC8I	GCNNGC	6 cut(s)	84, 88, 301, 645, 693, 846
BstDEI	CTNAG	4 cut(s)	66, 140, 255, 465
BstF5I	GGATG	3 cut(s)	127, 429, 1045
BstFNI	CGCG	4 cut(s)	152, 502, 846, 848
BstHHI	GCGC	3 cut(s)	340, 846, 848
BstKTI	GATC	9 cut(s)	57, 213, 474, 543, 577, 603, 673, 802, 1109
BstMAI	GTCTC	2 cut(s)	374, 1047
BstMBI	GATC	9 cut(s)	54, 210, 471, 540, 574, 600, 670, 799, 1106
BstMCI	CGRYCG	2 cut(s)	57, 1109
BstMWI	GCNNNNNNNGC	3 cut(s)	79, 222, 1028
BstNI	CCWGG	4 cut(s)	481, 520, 762, 1050
BstPAI	GACNNNNGTC	1 cut(s)	654
BstSCI	CCNGG	4 cut(s)	479, 518, 760, 1048
BstSFI	CTRYAG	2 cut(s)	304, 641
BstUI	CGCG	4 cut(s)	152, 502, 846, 848
BstV1I	GCAGC	5 cut(s)	290, 352, 580, 1009, 1117
BstV2I	GAAGAC	2 cut(s)	453, 906
BstX2I	RGATCY	1 cut(s)	600
BstXI	CCANNNNNNTGG	1 cut(s)	820
BstYI	RGATCY	1 cut(s)	600
Bsu15I	ATCGAT	1 cut(s)	47
BsuI	GTATCC	1 cut(s)	173
BsuRI	GGCC	2 cut(s)	203, 499
BsuTUI	ATCGAT	1 cut(s)	47
BtgZI	GCGATG	1 cut(s)	133
BtsCI	GGATG	3 cut(s)	127, 429, 1045
BtsI	GCAGTG	1 cut(s)	976
BtsIMutI	CAGTG	2 cut(s)	442, 976
Cac8I	GCNNGC	6 cut(s)	84, 88, 301, 645, 693, 846
CciI	TCATGA	1 cut(s)	949
CfoI	GCGC	3 cut(s)	340, 846, 848
Cfr13I	GGNCC	1 cut(s)	1042
ClaI	ATCGAT	1 cut(s)	47
CsiI	ACCWGGT	1 cut(s)	760
Csp6I	GTAC	6 cut(s)	14, 130, 570, 703, 928, 1103
CviAII	CATG	2 cut(s)	488, 950
CviQI	GTAC	6 cut(s)	14, 130, 570, 703, 928, 1103
DdeI	CTNAG	4 cut(s)	66, 140, 255, 465
DpnI	GATC	9 cut(s)	56, 212, 473, 542, 576, 602, 672, 801, 1108
DpnII	GATC	9 cut(s)	54, 210, 471, 540, 574, 600, 670, 799, 1106
EaeI	YGGCCR	1 cut(s)	497
Eam1104I	CTCTTC	3 cut(s)	168, 576, 825
EarI	CTCTTC	3 cut(s)	168, 576, 825
Ecl136II	GAGCTC	1 cut(s)	178
Eco130I	CCWWGG	1 cut(s)	941
Eco24I	GRGCYC	2 cut(s)	180, 234
Eco31I	GGTCTC	1 cut(s)	1047
Eco47I	GGWCC	1 cut(s)	1042
Eco53kI	GAGCTC	1 cut(s)	178
Eco88I	CYCGRG	1 cut(s)	1094
EcoICRI	GAGCTC	1 cut(s)	178
EcoRII	CCWGG	4 cut(s)	479, 518, 760, 1048
EcoT14I	CCWWGG	1 cut(s)	941
EcoT22I	ATGCAT	1 cut(s)	249
EcoT38I	GRGCYC	2 cut(s)	180, 234
ErhI	CCWWGG	1 cut(s)	941
FaeI	CATG	2 cut(s)	491, 953
FaqI	GGGAC	1 cut(s)	11
FatI	CATG	2 cut(s)	487, 949
FauI	CCCGC	1 cut(s)	91
FauNDI	CATATG	1 cut(s)	753
Fnu4HI	GCNGC	7 cut(s)	297, 304, 341, 500, 594, 1023, 1131
FokI	GGATG	3 cut(s)	134, 436, 1032
FriOI	GRGCYC	2 cut(s)	180, 234
Fsp4HI	GCNGC	7 cut(s)	297, 304, 341, 500, 594, 1023, 1131
FspBI	CTAG	1 cut(s)	167
FspI	TGCGCA	1 cut(s)	339
GlaI	GCGC	3 cut(s)	339, 845, 847
GluI	GCNGC	7 cut(s)	297, 304, 341, 500, 594, 1023, 1131
GsuI	CTGGAG	2 cut(s)	870, 1071
HaeIII	GGCC	2 cut(s)	203, 499
HapII	CCGG	2 cut(s)	17, 237
HhaI	GCGC	3 cut(s)	340, 846, 848
Hin1II	CATG	2 cut(s)	491, 953
Hin6I	GCGC	3 cut(s)	338, 844, 846
HinP1I	GCGC	3 cut(s)	338, 844, 846
HincII	GTYRAC	2 cut(s)	588, 659
HindII	GTYRAC	2 cut(s)	588, 659
HindIII	AAGCTT	1 cut(s)	530
HinfI	GANTC	4 cut(s)	68, 115, 427, 1167
HpaI	GTTAAC	1 cut(s)	588
HpaII	CCGG	2 cut(s)	17, 237
HphI	GGTGA	4 cut(s)	374, 949, 1049, 1162
Hpy166II	GTNNAC	5 cut(s)	283, 588, 659, 767, 957
Hpy188I	TCNGA	1 cut(s)	67
Hpy188III	TCNNGA	8 cut(s)	119, 181, 401, 431, 578, 718, 887, 950
Hpy8I	GTNNAC	5 cut(s)	283, 588, 659, 767, 957
Hpy99I	CGWCG	2 cut(s)	38, 224
HpyAV	CCTTC	3 cut(s)	193, 262, 865
HpyCH4III	ACNGT	6 cut(s)	385, 437, 707, 927, 961, 983
HpyCH4IV	ACGT	1 cut(s)	676
HpyCH4V	TGCA	7 cut(s)	247, 306, 619, 626, 643, 969, 1031
HpyF10VI	GCNNNNNNNGC	3 cut(s)	79, 222, 1028
HpyF3I	CTNAG	4 cut(s)	66, 140, 255, 465
HpySE526I	ACGT	1 cut(s)	676
Hsp92II	CATG	2 cut(s)	491, 953
HspAI	GCGC	3 cut(s)	338, 844, 846
KspAI	GTTAAC	1 cut(s)	588
Kzo9I	GATC	9 cut(s)	54, 210, 471, 540, 574, 600, 670, 799, 1106
LguI	GCTCTTC	1 cut(s)	168
LmnI	GCTCC	2 cut(s)	19, 144
Lsp1109I	GCAGC	5 cut(s)	290, 352, 580, 1009, 1117
LweI	GCATC	1 cut(s)	156
MabI	ACCWGGT	1 cut(s)	760
MaeI	CTAG	1 cut(s)	167
MaeII	ACGT	1 cut(s)	676
MaeIII	GTNAC	3 cut(s)	483, 744, 1168
MalI	GATC	9 cut(s)	56, 212, 473, 542, 576, 602, 672, 801, 1108
MboI	GATC	9 cut(s)	54, 210, 471, 540, 574, 600, 670, 799, 1106
MfeI	CAATTG	1 cut(s)	110
MflI	RGATCY	1 cut(s)	600
MhlI	GDGCHC	3 cut(s)	180, 234, 693
MluCI	AATT	7 cut(s)	110, 184, 273, 558, 933, 1013, 1159
MlyI	GAGTC	3 cut(s)	77, 124, 1176
Mph1103I	ATGCAT	1 cut(s)	249
MseI	TTAA	3 cut(s)	276, 587, 867
MslI	CAYNNNNRTG	1 cut(s)	818
MspI	CCGG	2 cut(s)	17, 237
MspR9I	CCNGG	4 cut(s)	481, 520, 762, 1050
MunI	CAATTG	1 cut(s)	110
Mva1269I	GAATGC	1 cut(s)	249
MvaI	CCWGG	4 cut(s)	481, 520, 762, 1050
MvnI	CGCG	4 cut(s)	152, 502, 846, 848
MwoI	GCNNNNNNNGC	3 cut(s)	79, 222, 1028
NdeI	CATATG	1 cut(s)	753
NdeII	GATC	9 cut(s)	54, 210, 471, 540, 574, 600, 670, 799, 1106
NlaIII	CATG	2 cut(s)	491, 953
NmeAIII	GCCGAG	1 cut(s)	229
NmuCI	GTSAC	3 cut(s)	483, 744, 1168
NsbI	TGCGCA	1 cut(s)	339
NsiI	ATGCAT	1 cut(s)	249
PaeR7I	CTCGAG	1 cut(s)	1094
PagI	TCATGA	1 cut(s)	949
PauI	GCGCGC	1 cut(s)	844
PciSI	GCTCTTC	1 cut(s)	168
PctI	GAATGC	1 cut(s)	249
PfeI	GAWTC	1 cut(s)	427
PfoI	TCCNGGA	1 cut(s)	1048
PkrI	GCNGC	7 cut(s)	298, 305, 342, 501, 595, 1024, 1132
Ple19I	CGATCG	2 cut(s)	57, 1109
PleI	GAGTC	3 cut(s)	76, 123, 1175
PpsI	GAGTC	3 cut(s)	76, 123, 1175
PshAI	GACNNNNGTC	1 cut(s)	654
PshBI	ATTAAT	1 cut(s)	276
Psp124BI	GAGCTC	1 cut(s)	180
Psp6I	CCWGG	4 cut(s)	479, 518, 760, 1048
PspGI	CCWGG	4 cut(s)	479, 518, 760, 1048
PspPI	GGNCC	1 cut(s)	1042
PspXI	VCTCGAGB	1 cut(s)	1094
PstI	CTGCAG	2 cut(s)	308, 645
PsuI	RGATCY	1 cut(s)	600
PteI	GCGCGC	1 cut(s)	844
PvuI	CGATCG	2 cut(s)	57, 1109
RsaI	GTAC	6 cut(s)	15, 131, 571, 704, 929, 1104
RsaNI	GTAC	6 cut(s)	14, 130, 570, 703, 928, 1103
RseI	CAYNNNNRTG	1 cut(s)	818
SacI	GAGCTC	1 cut(s)	180
SapI	GCTCTTC	1 cut(s)	168
SaqAI	TTAA	3 cut(s)	276, 587, 867
SatI	GCNGC	7 cut(s)	297, 304, 341, 500, 594, 1023, 1131
Sau3AI	GATC	9 cut(s)	54, 210, 471, 540, 574, 600, 670, 799, 1106
Sau96I	GGNCC	1 cut(s)	1042
SbfI	CCTGCAGG	1 cut(s)	645
ScaI	AGTACT	1 cut(s)	704
SchI	GAGTC	3 cut(s)	77, 124, 1176
ScrFI	CCNGG	4 cut(s)	481, 520, 762, 1050
SdaI	CCTGCAGG	1 cut(s)	645
SduI	GDGCHC	3 cut(s)	180, 234, 693
SexAI	ACCWGGT	1 cut(s)	760
SfaNI	GCATC	1 cut(s)	156
SfcI	CTRYAG	2 cut(s)	304, 641
Sfr274I	CTCGAG	1 cut(s)	1094
SinI	GGWCC	1 cut(s)	1042
SlaI	CTCGAG	1 cut(s)	1094
SmiMI	CAYNNNNRTG	1 cut(s)	818
SmlI	CTYRAG	3 cut(s)	179, 401, 1094
SmoI	CTYRAG	3 cut(s)	179, 401, 1094
Sse8387I	CCTGCAGG	1 cut(s)	645
Sse9I	AATT	7 cut(s)	110, 184, 273, 558, 933, 1013, 1159
SsiI	CCGC	5 cut(s)	84, 152, 297, 500, 848
SspMI	CTAG	1 cut(s)	167
SstI	GAGCTC	1 cut(s)	180
StyD4I	CCNGG	4 cut(s)	479, 518, 760, 1048
StyI	CCWWGG	1 cut(s)	941
TaaI	ACNGT	6 cut(s)	385, 437, 707, 927, 961, 983
TaiI	ACGT	1 cut(s)	679
TaqI	TCGA	5 cut(s)	47, 53, 536, 897, 1095
TasI	AATT	7 cut(s)	110, 184, 273, 558, 933, 1013, 1159
TatI	WGTACW	1 cut(s)	702
TauI	GCSGC	2 cut(s)	299, 502
TfiI	GAWTC	1 cut(s)	427
Tru1I	TTAA	3 cut(s)	276, 587, 867
Tru9I	TTAA	3 cut(s)	276, 587, 867
TscAI	CASTG	2 cut(s)	442, 976
TseFI	GTSAC	3 cut(s)	483, 744, 1168
TseI	GCWGC	5 cut(s)	303, 340, 593, 1022, 1130
Tsp45I	GTSAC	3 cut(s)	483, 744, 1168
TspDTI	ATGAA	3 cut(s)	440, 843, 938
TspRI	CASTG	2 cut(s)	442, 976
VpaK11BI	GGWCC	1 cut(s)	1042
VspI	ATTAAT	1 cut(s)	276
XapI	RAATTY	1 cut(s)	184
XcmI	CCANNNNNNNNNTGG	1 cut(s)	758
XhoI	CTCGAG	1 cut(s)	1094
XspI	CTAG	1 cut(s)	167
ZrmI	AGTACT	1 cut(s)	704
Zsp2I	ATGCAT	1 cut(s)	249

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.