Rorug05G0306000

Belongs to the class-I aminoacyl-tRNA synthetase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
35738773 .. 35741930
3158 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0306000.1

Sequence Viewer

Length: 1779 bp
ATGGCGGGATCACAATCTGCTAGTGTATCGAAGAAGACAAAGTCGAAGGAAAAACATTCGAAGCCTAAGAAGACCAAGTCTTTGAAGTCACCAACAACATCTTCATTTTCTGATGGATCTCACTCAAATAAGGGAAAGTCCAAAAAGAAAGAAGTTGAACCAACCGGGGGACTAAAGTTGCTGAAGCGGCATGCGGTGACTATGTCACGCATTACAAGCCGCAAGAATCGTACACAGAAGAAGGTTGTTTTATTTAACCGAAAAGGGACCCCTTGTGGGAAGGTGGCTAAGCAAATACAAAGCTACATTGGTGTATTGGCAAGAAGGAAGGTACCGACAATAAGGGAAAACTGGAAAGCGGCAACTGATGAAGAGAAGAACAAAATCTGGCAACGTGTTCAGGAAAAGCGTCGTGAGCAACAACAGAGGCGCAACTTGAATAAGTATCCTCATAGAATGTCACGTAAGGGATATGCAGGGTTGGAGGATGAGTTGGCTACCGGAATGAGTGACGAAGAAGTTGATAGGGCCACTTTGTGGATAAAAGGACGACAAACAAAGGATGGCAGTTTCAAGGATGAGGAGTCAAAAAATACTGCTGAAAAGATAGCAAACTTGAAGAGAAAGGTTGCTAGTGGAGAACTAAATGTTGAAGGAACAAATGATGTCTTGACATTGGCTTTGGGGACTCTAGAGCATGGGGGAAGAGTGCGGGGAATAGGTGGTTTTGTCACTCCCTCTACTTACTTCCACCTCCCTAAACGTAGAAAGGAGAGCATAGAAGCTACTGTCAGAGTTAGTGTGCAGAAAATATTGTTAGAGGAGAGAGAGAAGATAGTAGAGGAGGCAAGGGAGAAGATACTAGAGGAGGCAAGGGAGAGGATAATTAAGGAAGCGAAAGAAAAAATACTTGCAGAGGAGCGGGCTATGTGGGAGGCTAAGTTTGCTGAACTTGAAGCAAAGAGCATTTTTGAAGCAATGGAAAACAAAACCCTCATGCATAAAACGAAACGGACAAAGGTGGTTAAGGAAGGTAGGTTGGATAAACGTCTTTGCTCCAAGGGAGGTAATGAGTTTCCCAAGTTGGTTGAGAAAGTAGTTATCAACCGTGATGATGTCACTGAGGCTGTTGAAGAAAATGTCAATCTGACCAAGGAGCCGGAGAATGAGGAGGGGGTAGAATACGTGGATTTGACGATGTGTCCACCCACATCAAAGTCAAAGGTAGCTGAGGTTGAATGCAAGTTGGCAATAGGTTCTGTTGAACATATTGTTGCTTGTGCCACTGTTATGGAGTGCAAGGATCCTTCCCAACTCGTTCATGGCACTCCACTAGGGGATGGCAATGTGCGCGTTTCTATCTATGCCGCGCTTGAGGAGAAAGCAAAAGTGCCATTTCCTGTGAAAGATGAAATTGAAACAGTGAAGCAGGCTATGGGGAGTTGGGTAGCATGGCCTAAACACCTAGTCATAAAATCACATCTCAAGAAACCTCCCAAGGATAGTGCTGAAAAGAAGAAGAAAAGGAAAGAGATAGGGGAAGAGGACTCGGAGATTGAATTTGGCTTGGCTAAATTGGCACCATCATTACCAGCTTCATTGAAGATGTTATGTTTGTGGGGTGAAGATGCATTCAAAGATGGGCATACAATCAGCTTCTACATGGAGCCTGAAGTGTTTGGATTTTCTCGCAAGACTTATATATTGGGAAAAGATGTTCGGCGACTGGCAAGCATGAGGGAATTAACTGGAACTTGCATTGTAGTGTACCAGAGGTAG

Protein Analysis

592

Amino Acids

66.85

Weight (kDa)

9.58

Isoelectric Point (pI)

47.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transposase_24 PF03004 129 - 246 6.7e-12 Plant transposase (Ptta/En/Spm family)
DUF8039 PF26133 412 - 491 2.1e-13 Domain of unknown function (DUF8039)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000649)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G33840
fragaria_vesca FvH4_2g00190 FvH4_4g18133 FvH4_4g36450 FvH4_5g02490 FvH4_5g35150 FvH4_6g35840
malus_domestica MD04G1034100.v1.1 MD06G1084100.v1.1
prunus_persica Prupe.2G139100_v2.0.a1 Prupe.5G096900_v2.0.a1 Prupe.5G096900_v2.0.a1 Prupe.5G100500_v2.0.a1 Prupe.5G100500_v2.0.a1 Prupe.5G100500_v2.0.a1
pyrus_communis pycom04g02850
rosa_chinensis RchiOBHm_Chr1g0324941 RchiOBHm_Chr1g0340751 RchiOBHm_Chr2g0133721 RchiOBHm_Chr2g0153921 RchiOBHm_Chr4g0396761 RchiOBHm_Chr4g0414291 RchiOBHm_Chr4g0429871 RchiOBHm_Chr4g0446211 RchiOBHm_Chr5g0057181 RchiOBHm_Chr5g0057391 RchiOBHm_Chr5g0077561 RchiOBHm_Chr6g0307121 RchiOBHm_Chr7g0197611
rosa_laevigata RLG00000003922 RLG00000005681 RLG00000017313 RLG00000029149 RLG00000035152
rosa_multiflora Rmu_co8043936.1_g000001 Rmu_sc0001164.1_g000009 Rmu_sc0001334.1_g000004 Rmu_sc0004952.1_g000011 Rmu_sc0013154.1_g000007 Rmu_sc0017650.1_g000006 Rmu_sc0018062.1_g000003
rosa_roxburghii Rroxscaffold_1G00023030 Rroxscaffold_2G00094650 Rroxscaffold_3G00223000 Rroxscaffold_3G00232150 Rroxscaffold_3G00248030 Rroxscaffold_3G00248040 Rroxscaffold_3G00258320
rosa_rugosa Rorug04G0184600 Rorug04G0368500 Rorug05G0306000 Rorug05G0307100 Rorug07G0041900
rosa_samantha Rh2CG164400 Rh2DG389300 Rh3AG306800 Rh4AG430600 Rh4BG440000 Rh4CG457300 Rh4DG438500 Rh5AG375500 Rh5BG386300 Rh5CG409700 Rh5DG400300 Rh6CG481100 Rh7AG166300 Rh7AG360600 Rh7BG168400 Rh7CG174700 Rh7DG168000 Rh7DG387600
rosa_wichuraiana Rw2G022790 Rw4G036780 Rw5G035320 Rw5G035460 Rw7G014480 Rw7G038030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 331
AccB1I GGYRCC 2 cut(s) 331, 1579
AccB7I CCANNNNNTGG 1 cut(s) 537
AccBSI CCGCTC 1 cut(s) 922
AccII CGCG 2 cut(s) 1353, 1370
AciI CCGC 8 cut(s) 5, 187, 194, 220, 359, 712, 922, 1368
AclWI GGATC 4 cut(s) 16, 124, 1298, 1311
AcsI RAATTY 1 cut(s) 1559
AcuI CTGAAG 2 cut(s) 203, 1692
AdeI CACNNNGTG 1 cut(s) 537
AfaI GTAC 3 cut(s) 232, 333, 1769
AfiI CCNNNNNNNGG 3 cut(s) 167, 276, 537
AflIII ACRYGT 1 cut(s) 394
AhdI GACNNNNNGTC 1 cut(s) 1200
AjuI GAANNNNNNNTTGG 2 cut(s) 85, 117
AloI GAACNNNNNNTCC 2 cut(s) 1701, 1733
AluBI AGCT 5 cut(s) 303, 785, 1229, 1595, 1656
AluI AGCT 5 cut(s) 303, 785, 1229, 1595, 1656
AlwI GGATC 4 cut(s) 16, 124, 1298, 1311
AoxI GGCC 2 cut(s) 528, 1454
ApoI RAATTY 1 cut(s) 1559
ArsI GACNNNNNNTTYG 4 cut(s) 64, 96, 664, 696
Asp718I GGTACC 1 cut(s) 331
AspLEI GCGC 3 cut(s) 432, 1353, 1372
AspS9I GGNCC 2 cut(s) 267, 528
AsuC2I CCSGG 1 cut(s) 166
AsuHPI GGTGA 3 cut(s) 81, 208, 1634
AsuII TTCGAA 1 cut(s) 59
AvaII GGWCC 1 cut(s) 267
BamHI GGATCC 1 cut(s) 1303
BanI GGYRCC 2 cut(s) 331, 1579
BbsI GAAGAC 2 cut(s) 41, 77
BbvCI CCTCAGC 1 cut(s) 1230
BccI CCATC 5 cut(s) 107, 557, 1334, 1591, 1634
BciVI GTATCC 1 cut(s) 456
BcnI CCSGG 1 cut(s) 166
BfaI CTAG 6 cut(s) 21, 633, 692, 863, 1334, 1466
BfuI GTATCC 1 cut(s) 456
BisI GCNGC 4 cut(s) 188, 220, 360, 1368
BlpI GCTNAGC 1 cut(s) 288
BlsI GCNGC 4 cut(s) 189, 221, 361, 1369
Bme1390I CCNGG 1 cut(s) 166
Bme18I GGWCC 1 cut(s) 267
BmeRI GACNNNNNGTC 1 cut(s) 1200
BmgT120I GGNCC 2 cut(s) 267, 528
BmiI GGNNCC 7 cut(s) 268, 269, 333, 1158, 1305, 1581, 1668
BmrFI CCNGG 1 cut(s) 166
BmsI GCATC 1 cut(s) 1618
BpiI GAAGAC 2 cut(s) 41, 77
Bpu10I CCTNAGC 1 cut(s) 1230
Bpu1102I GCTNAGC 1 cut(s) 288
Bpu14I TTCGAA 1 cut(s) 59
BpuEI CTTGAG 2 cut(s) 1394, 1469
BpuMI CCSGG 1 cut(s) 166
BsaAI YACGTR 2 cut(s) 464, 1186
BsaBI GATNNNNATC 1 cut(s) 13
BsaJI CCNNGG 4 cut(s) 165, 1059, 1152, 1497
BsaWI WCCGGW 1 cut(s) 500
BsaXI ACNNNNNCTCC 4 cut(s) 476, 506, 926, 956
Bsc4I CCNNNNNNNGG 3 cut(s) 167, 276, 537
Bse1I ACTGG 3 cut(s) 356, 1731, 1753
Bse3DI GCAATG 2 cut(s) 984, 1351
Bse8I GATNNNNATC 1 cut(s) 13
BseDI CCNNGG 4 cut(s) 165, 1059, 1152, 1497
BseGI GGATG 4 cut(s) 493, 568, 583, 1345
BseJI GATNNNNATC 1 cut(s) 13
BseLI CCNNNNNNNGG 3 cut(s) 167, 276, 537
BseMI GCAATG 2 cut(s) 984, 1351
BseMII CTCAG 2 cut(s) 1113, 1221
BseNI ACTGG 3 cut(s) 356, 1731, 1753
BseRI GAGGAG 7 cut(s) 596, 836, 857, 881, 932, 1184, 1391
BsgI GTGCAG 1 cut(s) 824
Bsh1236I CGCG 2 cut(s) 1353, 1370
BshFI GGCC 2 cut(s) 530, 1456
BshNI GGYRCC 2 cut(s) 331, 1579
BsiSI CCGG 3 cut(s) 165, 501, 1160
BslFI GGGAC 3 cut(s) 183, 280, 700
BslI CCNNNNNNNGG 3 cut(s) 167, 276, 537
BsmFI GGGAC 3 cut(s) 183, 280, 700
BsmI GAATGC 2 cut(s) 1244, 1631
BsnI GGCC 2 cut(s) 530, 1456
Bsp119I TTCGAA 1 cut(s) 59
Bsp143I GATC 3 cut(s) 8, 116, 1303
Bsp1720I GCTNAGC 1 cut(s) 288
BspACI CCGC 8 cut(s) 5, 187, 194, 220, 359, 712, 922, 1368
BspANI GGCC 2 cut(s) 530, 1456
BspCNI CTCAG 2 cut(s) 1114, 1222
BspFNI CGCG 2 cut(s) 1353, 1370
BspLI GGNNCC 7 cut(s) 268, 269, 333, 1158, 1305, 1581, 1668
BspPI GGATC 4 cut(s) 16, 124, 1298, 1311
BspT104I TTCGAA 1 cut(s) 59
BspT107I GGYRCC 2 cut(s) 331, 1579
BsrBI CCGCTC 1 cut(s) 922
BsrDI GCAATG 2 cut(s) 984, 1351
BsrI ACTGG 3 cut(s) 356, 1731, 1753
BssECI CCNNGG 4 cut(s) 165, 1059, 1152, 1497
BssMI GATC 3 cut(s) 8, 116, 1303
BssT1I CCWWGG 3 cut(s) 1059, 1152, 1497
Bst4CI ACNGT 4 cut(s) 790, 1109, 1288, 1423
Bst6I CTCTTC 4 cut(s) 366, 614, 700, 1536
BstBAI YACGTR 2 cut(s) 464, 1186
BstBI TTCGAA 1 cut(s) 59
BstC8I GCNNGC 4 cut(s) 192, 924, 1431, 1732
BstDEI CTNAG 5 cut(s) 66, 288, 939, 1122, 1230
BstF5I GGATG 4 cut(s) 493, 568, 583, 1345
BstFNI CGCG 2 cut(s) 1353, 1370
BstHHI GCGC 3 cut(s) 432, 1353, 1372
BstKTI GATC 3 cut(s) 11, 119, 1306
BstMBI GATC 3 cut(s) 8, 116, 1303
BstMWI GCNNNNNNNGC 6 cut(s) 187, 216, 415, 944, 1350, 1577
BstNSI RCATGY 1 cut(s) 194
BstSCI CCNGG 1 cut(s) 164
BstUI CGCG 2 cut(s) 1353, 1370
BstV2I GAAGAC 2 cut(s) 41, 77
BstX2I RGATCY 2 cut(s) 116, 1303
BstXI CCANNNNNNTGG 1 cut(s) 1291
BstYI RGATCY 2 cut(s) 116, 1303
BsuI GTATCC 1 cut(s) 456
BsuRI GGCC 2 cut(s) 530, 1456
BtsCI GGATG 4 cut(s) 493, 568, 583, 1345
BtsIMutI CAGTG 3 cut(s) 1119, 1284, 1428
Cac8I GCNNGC 4 cut(s) 192, 924, 1431, 1732
CfoI GCGC 3 cut(s) 432, 1353, 1372
Cfr13I GGNCC 2 cut(s) 267, 528
CseI GACGC 1 cut(s) 398
Csp6I GTAC 3 cut(s) 231, 332, 1768
CviAII CATG 7 cut(s) 191, 698, 997, 1322, 1452, 1663, 1735
CviQI GTAC 3 cut(s) 231, 332, 1768
DdeI CTNAG 5 cut(s) 66, 288, 939, 1122, 1230
DpnI GATC 3 cut(s) 10, 118, 1305
DpnII GATC 3 cut(s) 8, 116, 1303
DraIII CACNNNGTG 1 cut(s) 537
DriI GACNNNNNGTC 1 cut(s) 1200
Eam1104I CTCTTC 4 cut(s) 366, 614, 700, 1536
Eam1105I GACNNNNNGTC 1 cut(s) 1200
EarI CTCTTC 4 cut(s) 366, 614, 700, 1536
Eco130I CCWWGG 3 cut(s) 1059, 1152, 1497
Eco47I GGWCC 1 cut(s) 267
Eco57I CTGAAG 2 cut(s) 203, 1692
EcoO109I RGGNCCY 1 cut(s) 267
EcoT14I CCWWGG 3 cut(s) 1059, 1152, 1497
EcoT22I ATGCAT 2 cut(s) 1002, 1633
ErhI CCWWGG 3 cut(s) 1059, 1152, 1497
FaeI CATG 7 cut(s) 194, 701, 1000, 1325, 1455, 1666, 1738
FaqI GGGAC 3 cut(s) 183, 280, 700
FatI CATG 7 cut(s) 190, 697, 996, 1321, 1451, 1662, 1734
FauI CCCGC 2 cut(s) 705, 915
Fnu4HI GCNGC 4 cut(s) 188, 220, 360, 1368
FokI GGATG 4 cut(s) 500, 575, 590, 1352
Fsp4HI GCNGC 4 cut(s) 188, 220, 360, 1368
FspBI CTAG 6 cut(s) 21, 633, 692, 863, 1334, 1466
GlaI GCGC 3 cut(s) 431, 1352, 1371
GluI GCNGC 4 cut(s) 188, 220, 360, 1368
HaeIII GGCC 2 cut(s) 530, 1456
HapII CCGG 3 cut(s) 165, 501, 1160
HgaI GACGC 1 cut(s) 398
HhaI GCGC 3 cut(s) 432, 1353, 1372
Hin1II CATG 7 cut(s) 194, 701, 1000, 1325, 1455, 1666, 1738
Hin6I GCGC 3 cut(s) 430, 1351, 1370
HinP1I GCGC 3 cut(s) 430, 1351, 1370
HinfI GANTC 4 cut(s) 226, 584, 688, 1547
HpaII CCGG 3 cut(s) 165, 501, 1160
HphI GGTGA 3 cut(s) 81, 208, 1634
Hpy166II GTNNAC 3 cut(s) 233, 1205, 1768
Hpy188I TCNGA 4 cut(s) 112, 794, 1149, 1552
Hpy188III TCNNGA 5 cut(s) 401, 413, 670, 692, 1486
Hpy8I GTNNAC 3 cut(s) 233, 1205, 1768
Hpy99I CGWCG 1 cut(s) 414
HpyAV CCTTC 8 cut(s) 40, 235, 274, 318, 322, 647, 1025, 1317
HpyCH4III ACNGT 4 cut(s) 790, 1109, 1288, 1423
HpyCH4IV ACGT 5 cut(s) 394, 463, 763, 1048, 1185
HpyCH4V TGCA 8 cut(s) 476, 805, 914, 1000, 1242, 1299, 1631, 1758
HpyF10VI GCNNNNNNNGC 6 cut(s) 187, 216, 415, 944, 1350, 1577
HpyF3I CTNAG 5 cut(s) 66, 288, 939, 1122, 1230
HpySE526I ACGT 5 cut(s) 394, 463, 763, 1048, 1185
Hsp92II CATG 7 cut(s) 194, 701, 1000, 1325, 1455, 1666, 1738
HspAI GCGC 3 cut(s) 430, 1351, 1370
KflI GGGWCCC 1 cut(s) 267
KpnI GGTACC 1 cut(s) 335
Kzo9I GATC 3 cut(s) 8, 116, 1303
LmnI GCTCC 4 cut(s) 919, 1061, 1156, 1666
LweI GCATC 1 cut(s) 1618
MaeI CTAG 6 cut(s) 21, 633, 692, 863, 1334, 1466
MaeII ACGT 5 cut(s) 394, 463, 763, 1048, 1185
MaeIII GTNAC 7 cut(s) 87, 196, 204, 459, 509, 730, 1117
MalI GATC 3 cut(s) 10, 118, 1305
MbiI CCGCTC 1 cut(s) 922
MboI GATC 3 cut(s) 8, 116, 1303
MflI RGATCY 2 cut(s) 116, 1303
MluCI AATT 5 cut(s) 885, 1413, 1559, 1574, 1742
MlyI GAGTC 3 cut(s) 593, 682, 1541
MmeI TCCRAC 2 cut(s) 462, 1020
Mph1103I ATGCAT 2 cut(s) 1002, 1633
MseI TTAA 4 cut(s) 255, 888, 1026, 1745
MslI CAYNNNNRTG 2 cut(s) 1289, 1763
MspI CCGG 3 cut(s) 165, 501, 1160
MspR9I CCNGG 1 cut(s) 166
Mva1269I GAATGC 2 cut(s) 1244, 1631
MvnI CGCG 2 cut(s) 1353, 1370
MwoI GCNNNNNNNGC 6 cut(s) 187, 216, 415, 944, 1350, 1577
NciI CCSGG 1 cut(s) 166
NdeII GATC 3 cut(s) 8, 116, 1303
NlaIII CATG 7 cut(s) 194, 701, 1000, 1325, 1455, 1666, 1738
NlaIV GGNNCC 7 cut(s) 268, 269, 333, 1158, 1305, 1581, 1668
NmuCI GTSAC 7 cut(s) 87, 196, 204, 459, 509, 730, 1117
NsiI ATGCAT 2 cut(s) 1002, 1633
NspI RCATGY 1 cut(s) 194
NspV TTCGAA 1 cut(s) 59
PaeI GCATGC 1 cut(s) 194
PctI GAATGC 2 cut(s) 1244, 1631
PfeI GAWTC 1 cut(s) 226
PflFI GACNNNGTC 3 cut(s) 40, 76, 202
PflMI CCANNNNNTGG 1 cut(s) 537
PkrI GCNGC 4 cut(s) 189, 221, 361, 1369
PleI GAGTC 3 cut(s) 592, 682, 1541
PpsI GAGTC 3 cut(s) 592, 682, 1541
Ppu21I YACGTR 2 cut(s) 464, 1186
PpuMI RGGWCCY 1 cut(s) 267
Psp5II RGGWCCY 1 cut(s) 267
PspN4I GGNNCC 7 cut(s) 268, 269, 333, 1158, 1305, 1581, 1668
PspPI GGNCC 2 cut(s) 267, 528
PspPPI RGGWCCY 1 cut(s) 267
PsuI RGATCY 2 cut(s) 116, 1303
PsyI GACNNNGTC 3 cut(s) 40, 76, 202
RsaI GTAC 3 cut(s) 232, 333, 1769
RsaNI GTAC 3 cut(s) 231, 332, 1768
RseI CAYNNNNRTG 2 cut(s) 1289, 1763
SaqAI TTAA 4 cut(s) 255, 888, 1026, 1745
SatI GCNGC 4 cut(s) 188, 220, 360, 1368
Sau3AI GATC 3 cut(s) 8, 116, 1303
Sau96I GGNCC 2 cut(s) 267, 528
SchI GAGTC 3 cut(s) 593, 682, 1541
ScrFI CCNGG 1 cut(s) 166
SfaNI GCATC 1 cut(s) 1618
SfuI TTCGAA 1 cut(s) 59
SinI GGWCC 1 cut(s) 267
SmiMI CAYNNNNRTG 2 cut(s) 1289, 1763
SmlI CTYRAG 2 cut(s) 1373, 1484
SmoI CTYRAG 2 cut(s) 1373, 1484
SphI GCATGC 1 cut(s) 194
Sse9I AATT 5 cut(s) 885, 1413, 1559, 1574, 1742
SsiI CCGC 8 cut(s) 5, 187, 194, 220, 359, 712, 922, 1368
SspI AATATT 1 cut(s) 813
SspMI CTAG 6 cut(s) 21, 633, 692, 863, 1334, 1466
StyD4I CCNGG 1 cut(s) 164
StyI CCWWGG 3 cut(s) 1059, 1152, 1497
TaaI ACNGT 4 cut(s) 790, 1109, 1288, 1423
TaiI ACGT 5 cut(s) 397, 466, 766, 1051, 1188
TaqI TCGA 3 cut(s) 29, 44, 59
TasI AATT 5 cut(s) 885, 1413, 1559, 1574, 1742
TauI GCSGC 4 cut(s) 190, 222, 362, 1370
TfiI GAWTC 1 cut(s) 226
Tru1I TTAA 4 cut(s) 255, 888, 1026, 1745
Tru9I TTAA 4 cut(s) 255, 888, 1026, 1745
TscAI CASTG 3 cut(s) 1126, 1291, 1428
TseFI GTSAC 7 cut(s) 87, 196, 204, 459, 509, 730, 1117
Tsp45I GTSAC 7 cut(s) 87, 196, 204, 459, 509, 730, 1117
TspDTI ATGAA 5 cut(s) 93, 384, 1310, 1425, 1587
TspGWI ACGGA 1 cut(s) 1027
TspRI CASTG 3 cut(s) 1126, 1291, 1428
Tth111I GACNNNGTC 3 cut(s) 40, 76, 202
Van91I CCANNNNNTGG 1 cut(s) 537
VpaK11BI GGWCC 1 cut(s) 267
XapI RAATTY 1 cut(s) 1559
XbaI TCTAGA 1 cut(s) 691
XceI RCATGY 1 cut(s) 194
XcmI CCANNNNNNNNNTGG 1 cut(s) 1319
XspI CTAG 6 cut(s) 21, 633, 692, 863, 1334, 1466
Zsp2I ATGCAT 2 cut(s) 1002, 1633
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.