Belongs to the class-I aminoacyl-tRNA synthetase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| tRNA-synt_1b | PF00579 | 67 - 314 | 4.5e-55 | tRNA synthetases class I (W and Y) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 339 |
| AciI | CCGC | 4 cut(s) | 30, 84, 500, 836 |
| AclWI | GGATC | 4 cut(s) | 200, 548, 582, 678 |
| AcoI | YGGCCR | 1 cut(s) | 497 |
| AcsI | RAATTY | 1 cut(s) | 184 |
| AfaI | GTAC | 5 cut(s) | 131, 494, 704, 912, 917 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 172 |
| AgsI | TTSAA | 4 cut(s) | 268, 370, 380, 887 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 67 |
| AjnI | CCWGG | 3 cut(s) | 479, 518, 760 |
| AluBI | AGCT | 4 cut(s) | 90, 178, 343, 532 |
| AluI | AGCT | 4 cut(s) | 90, 178, 343, 532 |
| Alw21I | GWGCWC | 1 cut(s) | 180 |
| AlwI | GGATC | 4 cut(s) | 200, 548, 582, 678 |
| AoxI | GGCC | 2 cut(s) | 201, 497 |
| ApeKI | GCWGC | 3 cut(s) | 303, 340, 593 |
| ApoI | RAATTY | 1 cut(s) | 184 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 550, 582 |
| AseI | ATTAAT | 1 cut(s) | 276 |
| AspLEI | GCGC | 2 cut(s) | 340, 957 |
| AsuC2I | CCSGG | 1 cut(s) | 238 |
| AsuHPI | GGTGA | 2 cut(s) | 374, 937 |
| AsuII | TTCGAA | 1 cut(s) | 464 |
| BanII | GRGCYC | 2 cut(s) | 180, 234 |
| BauI | CACGAG | 1 cut(s) | 696 |
| BbsI | GAAGAC | 1 cut(s) | 453 |
| Bbv12I | GWGCWC | 1 cut(s) | 180 |
| BbvI | GCAGC | 3 cut(s) | 290, 352, 580 |
| BccI | CCATC | 2 cut(s) | 109, 349 |
| BceAI | ACGGC | 1 cut(s) | 238 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 317, 351 |
| BciT130I | CCWGG | 3 cut(s) | 481, 520, 762 |
| BciVI | GTATCC | 1 cut(s) | 173 |
| BcnI | CCSGG | 1 cut(s) | 238 |
| BfmI | CTRYAG | 1 cut(s) | 641 |
| BfuI | GTATCC | 1 cut(s) | 173 |
| BglII | AGATCT | 1 cut(s) | 600 |
| BisI | GCNGC | 4 cut(s) | 304, 341, 500, 594 |
| BlsI | GCNGC | 4 cut(s) | 305, 342, 501, 595 |
| BmcAI | AGTACT | 2 cut(s) | 494, 704 |
| Bme1390I | CCNGG | 4 cut(s) | 238, 481, 520, 762 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 67 |
| BmrFI | CCNGG | 4 cut(s) | 238, 481, 520, 762 |
| BmsI | GCATC | 1 cut(s) | 156 |
| BoxI | GACNNNNGTC | 1 cut(s) | 654 |
| BpiI | GAAGAC | 1 cut(s) | 453 |
| BpmI | CTGGAG | 1 cut(s) | 858 |
| Bpu10I | CCTNAGC | 1 cut(s) | 255 |
| Bpu14I | TTCGAA | 1 cut(s) | 464 |
| BpuEI | CTTGAG | 1 cut(s) | 164 |
| BpuMI | CCSGG | 1 cut(s) | 238 |
| Bsa29I | ATCGAT | 1 cut(s) | 47 |
| BsaAI | YACGTR | 1 cut(s) | 910 |
| BsaBI | GATNNNNATC | 1 cut(s) | 53 |
| BsaJI | CCNNGG | 2 cut(s) | 536, 929 |
| BsaWI | WCCGGW | 1 cut(s) | 16 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 773, 803 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 172 |
| Bse1I | ACTGG | 1 cut(s) | 500 |
| Bse3DI | GCAATG | 1 cut(s) | 626 |
| Bse8I | GATNNNNATC | 1 cut(s) | 53 |
| BseBI | CCWGG | 3 cut(s) | 481, 520, 762 |
| BseCI | ATCGAT | 1 cut(s) | 47 |
| BseDI | CCNNGG | 2 cut(s) | 536, 929 |
| BseGI | GGATG | 2 cut(s) | 127, 429 |
| BseJI | GATNNNNATC | 1 cut(s) | 53 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 172 |
| BseMI | GCAATG | 1 cut(s) | 626 |
| BseMII | CTCAG | 2 cut(s) | 57, 269 |
| BseNI | ACTGG | 1 cut(s) | 500 |
| BseRI | GAGGAG | 3 cut(s) | 170, 188, 799 |
| BseXI | GCAGC | 3 cut(s) | 290, 352, 580 |
| BsgI | GTGCAG | 1 cut(s) | 645 |
| Bsh1285I | CGRYCG | 1 cut(s) | 57 |
| BshFI | GGCC | 2 cut(s) | 203, 499 |
| BshVI | ATCGAT | 1 cut(s) | 47 |
| BsiEI | CGRYCG | 1 cut(s) | 57 |
| BsiHKAI | GWGCWC | 1 cut(s) | 180 |
| BsiSI | CCGG | 3 cut(s) | 17, 237, 297 |
| BslFI | GGGAC | 2 cut(s) | 11, 92 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 172 |
| BsmFI | GGGAC | 2 cut(s) | 11, 92 |
| BsmI | GAATGC | 1 cut(s) | 249 |
| BsnI | GGCC | 2 cut(s) | 203, 499 |
| Bsp119I | TTCGAA | 1 cut(s) | 464 |
| Bsp1286I | GDGCHC | 2 cut(s) | 180, 234 |
| Bsp143I | GATC | 9 cut(s) | 54, 205, 210, 471, 540, 574, 600, 670, 799 |
| BspACI | CCGC | 4 cut(s) | 30, 84, 500, 836 |
| BspANI | GGCC | 2 cut(s) | 203, 499 |
| BspCNI | CTCAG | 2 cut(s) | 58, 268 |
| BspDI | ATCGAT | 1 cut(s) | 47 |
| BspHI | TCATGA | 2 cut(s) | 577, 937 |
| BspMAI | CTGCAG | 1 cut(s) | 645 |
| BspPI | GGATC | 4 cut(s) | 200, 548, 582, 678 |
| BspT104I | TTCGAA | 1 cut(s) | 464 |
| BsrDI | GCAATG | 1 cut(s) | 626 |
| BsrI | ACTGG | 1 cut(s) | 500 |
| BssECI | CCNNGG | 2 cut(s) | 536, 929 |
| BssMI | GATC | 9 cut(s) | 54, 205, 210, 471, 540, 574, 600, 670, 799 |
| BssSI | CACGAG | 1 cut(s) | 696 |
| BssT1I | CCWWGG | 1 cut(s) | 929 |
| Bst2BI | CACGAG | 1 cut(s) | 696 |
| Bst2UI | CCWGG | 3 cut(s) | 481, 520, 762 |
| Bst4CI | ACNGT | 6 cut(s) | 385, 437, 707, 915, 949, 971 |
| Bst6I | CTCTTC | 3 cut(s) | 165, 576, 825 |
| BstBAI | YACGTR | 1 cut(s) | 910 |
| BstBI | TTCGAA | 1 cut(s) | 464 |
| BstC8I | GCNNGC | 4 cut(s) | 84, 88, 645, 693 |
| BstDEI | CTNAG | 3 cut(s) | 66, 140, 255 |
| BstF5I | GGATG | 2 cut(s) | 127, 429 |
| BstHHI | GCGC | 2 cut(s) | 340, 957 |
| BstKTI | GATC | 9 cut(s) | 57, 208, 213, 474, 543, 577, 603, 673, 802 |
| BstMBI | GATC | 9 cut(s) | 54, 205, 210, 471, 540, 574, 600, 670, 799 |
| BstMCI | CGRYCG | 1 cut(s) | 57 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 11, 79, 222 |
| BstNI | CCWGG | 3 cut(s) | 481, 520, 762 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 654 |
| BstSCI | CCNGG | 4 cut(s) | 236, 479, 518, 760 |
| BstSFI | CTRYAG | 1 cut(s) | 641 |
| BstSNI | TACGTA | 1 cut(s) | 910 |
| BstV1I | GCAGC | 3 cut(s) | 290, 352, 580 |
| BstV2I | GAAGAC | 1 cut(s) | 453 |
| BstX2I | RGATCY | 1 cut(s) | 600 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 820 |
| BstYI | RGATCY | 1 cut(s) | 600 |
| Bsu15I | ATCGAT | 1 cut(s) | 47 |
| BsuI | GTATCC | 1 cut(s) | 173 |
| BsuRI | GGCC | 2 cut(s) | 203, 499 |
| BsuTUI | ATCGAT | 1 cut(s) | 47 |
| BtgZI | GCGATG | 1 cut(s) | 133 |
| BtsCI | GGATG | 2 cut(s) | 127, 429 |
| BtsI | GCAGTG | 1 cut(s) | 964 |
| BtsIMutI | CAGTG | 2 cut(s) | 442, 964 |
| Cac8I | GCNNGC | 4 cut(s) | 84, 88, 645, 693 |
| CciI | TCATGA | 2 cut(s) | 577, 937 |
| CfoI | GCGC | 2 cut(s) | 340, 957 |
| ClaI | ATCGAT | 1 cut(s) | 47 |
| CsiI | ACCWGGT | 1 cut(s) | 760 |
| Csp6I | GTAC | 5 cut(s) | 130, 493, 703, 911, 916 |
| CviAII | CATG | 3 cut(s) | 488, 578, 938 |
| CviQI | GTAC | 5 cut(s) | 130, 493, 703, 911, 916 |
| DdeI | CTNAG | 3 cut(s) | 66, 140, 255 |
| DpnI | GATC | 9 cut(s) | 56, 207, 212, 473, 542, 576, 602, 672, 801 |
| DpnII | GATC | 9 cut(s) | 54, 205, 210, 471, 540, 574, 600, 670, 799 |
| DriI | GACNNNNNGTC | 1 cut(s) | 67 |
| EaeI | YGGCCR | 1 cut(s) | 497 |
| Eam1104I | CTCTTC | 3 cut(s) | 165, 576, 825 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 67 |
| EarI | CTCTTC | 3 cut(s) | 165, 576, 825 |
| EciI | GGCGGA | 1 cut(s) | 851 |
| Ecl136II | GAGCTC | 1 cut(s) | 178 |
| Eco105I | TACGTA | 1 cut(s) | 910 |
| Eco130I | CCWWGG | 1 cut(s) | 929 |
| Eco24I | GRGCYC | 2 cut(s) | 180, 234 |
| Eco53kI | GAGCTC | 1 cut(s) | 178 |
| EcoICRI | GAGCTC | 1 cut(s) | 178 |
| EcoRII | CCWGG | 3 cut(s) | 479, 518, 760 |
| EcoT14I | CCWWGG | 1 cut(s) | 929 |
| EcoT22I | ATGCAT | 1 cut(s) | 249 |
| EcoT38I | GRGCYC | 2 cut(s) | 180, 234 |
| ErhI | CCWWGG | 1 cut(s) | 929 |
| FaeI | CATG | 3 cut(s) | 491, 581, 941 |
| FaqI | GGGAC | 2 cut(s) | 11, 92 |
| FatI | CATG | 3 cut(s) | 487, 577, 937 |
| FauI | CCCGC | 2 cut(s) | 37, 91 |
| FauNDI | CATATG | 1 cut(s) | 753 |
| Fnu4HI | GCNGC | 4 cut(s) | 304, 341, 500, 594 |
| FokI | GGATG | 2 cut(s) | 134, 436 |
| FriOI | GRGCYC | 2 cut(s) | 180, 234 |
| Fsp4HI | GCNGC | 4 cut(s) | 304, 341, 500, 594 |
| FspI | TGCGCA | 1 cut(s) | 339 |
| GlaI | GCGC | 2 cut(s) | 339, 956 |
| GluI | GCNGC | 4 cut(s) | 304, 341, 500, 594 |
| GsuI | CTGGAG | 1 cut(s) | 858 |
| HaeIII | GGCC | 2 cut(s) | 203, 499 |
| HapII | CCGG | 3 cut(s) | 17, 237, 297 |
| HhaI | GCGC | 2 cut(s) | 340, 957 |
| Hin1II | CATG | 3 cut(s) | 491, 581, 941 |
| Hin6I | GCGC | 2 cut(s) | 338, 955 |
| HinP1I | GCGC | 2 cut(s) | 338, 955 |
| HincII | GTYRAC | 2 cut(s) | 588, 659 |
| HindII | GTYRAC | 2 cut(s) | 588, 659 |
| HindIII | AAGCTT | 1 cut(s) | 530 |
| HinfI | GANTC | 3 cut(s) | 62, 68, 427 |
| HpaI | GTTAAC | 1 cut(s) | 588 |
| HpaII | CCGG | 3 cut(s) | 17, 237, 297 |
| HphI | GGTGA | 2 cut(s) | 374, 937 |
| Hpy166II | GTNNAC | 6 cut(s) | 96, 283, 588, 659, 767, 945 |
| Hpy188I | TCNGA | 3 cut(s) | 67, 210, 537 |
| Hpy188III | TCNNGA | 6 cut(s) | 181, 431, 578, 718, 875, 938 |
| Hpy8I | GTNNAC | 6 cut(s) | 96, 283, 588, 659, 767, 945 |
| Hpy99I | CGWCG | 2 cut(s) | 38, 224 |
| HpyAV | CCTTC | 5 cut(s) | 193, 262, 460, 853, 881 |
| HpyCH4III | ACNGT | 6 cut(s) | 385, 437, 707, 915, 949, 971 |
| HpyCH4IV | ACGT | 2 cut(s) | 676, 909 |
| HpyCH4V | TGCA | 6 cut(s) | 247, 306, 619, 626, 643, 695 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 11, 79, 222 |
| HpyF3I | CTNAG | 3 cut(s) | 66, 140, 255 |
| HpySE526I | ACGT | 2 cut(s) | 676, 909 |
| Hsp92II | CATG | 3 cut(s) | 491, 581, 941 |
| HspAI | GCGC | 2 cut(s) | 338, 955 |
| KspAI | GTTAAC | 1 cut(s) | 588 |
| Kzo9I | GATC | 9 cut(s) | 54, 205, 210, 471, 540, 574, 600, 670, 799 |
| LmnI | GCTCC | 3 cut(s) | 19, 144, 175 |
| Lsp1109I | GCAGC | 3 cut(s) | 290, 352, 580 |
| LweI | GCATC | 1 cut(s) | 156 |
| MabI | ACCWGGT | 1 cut(s) | 760 |
| MaeII | ACGT | 2 cut(s) | 676, 909 |
| MaeIII | GTNAC | 2 cut(s) | 483, 744 |
| MalI | GATC | 9 cut(s) | 56, 207, 212, 473, 542, 576, 602, 672, 801 |
| MboI | GATC | 9 cut(s) | 54, 205, 210, 471, 540, 574, 600, 670, 799 |
| MflI | RGATCY | 1 cut(s) | 600 |
| MhlI | GDGCHC | 2 cut(s) | 180, 234 |
| MluCI | AATT | 3 cut(s) | 184, 273, 558 |
| MlyI | GAGTC | 2 cut(s) | 56, 77 |
| Mph1103I | ATGCAT | 1 cut(s) | 249 |
| MseI | TTAA | 3 cut(s) | 276, 587, 855 |
| MslI | CAYNNNNRTG | 1 cut(s) | 818 |
| MspI | CCGG | 3 cut(s) | 17, 237, 297 |
| MspR9I | CCNGG | 4 cut(s) | 238, 481, 520, 762 |
| Mva1269I | GAATGC | 1 cut(s) | 249 |
| MvaI | CCWGG | 3 cut(s) | 481, 520, 762 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 11, 79, 222 |
| NciI | CCSGG | 1 cut(s) | 238 |
| NdeI | CATATG | 1 cut(s) | 753 |
| NdeII | GATC | 9 cut(s) | 54, 205, 210, 471, 540, 574, 600, 670, 799 |
| NlaIII | CATG | 3 cut(s) | 491, 581, 941 |
| NmuCI | GTSAC | 2 cut(s) | 483, 744 |
| NsbI | TGCGCA | 1 cut(s) | 339 |
| NsiI | ATGCAT | 1 cut(s) | 249 |
| NspV | TTCGAA | 1 cut(s) | 464 |
| PagI | TCATGA | 2 cut(s) | 577, 937 |
| PctI | GAATGC | 1 cut(s) | 249 |
| PfeI | GAWTC | 1 cut(s) | 427 |
| PfoI | TCCNGGA | 1 cut(s) | 236 |
| PkrI | GCNGC | 4 cut(s) | 305, 342, 501, 595 |
| Ple19I | CGATCG | 1 cut(s) | 57 |
| PleI | GAGTC | 2 cut(s) | 56, 76 |
| PpsI | GAGTC | 2 cut(s) | 56, 76 |
| Ppu21I | YACGTR | 1 cut(s) | 910 |
| PshAI | GACNNNNGTC | 1 cut(s) | 654 |
| PshBI | ATTAAT | 1 cut(s) | 276 |
| Psp124BI | GAGCTC | 1 cut(s) | 180 |
| Psp6I | CCWGG | 3 cut(s) | 479, 518, 760 |
| PspGI | CCWGG | 3 cut(s) | 479, 518, 760 |
| PstI | CTGCAG | 1 cut(s) | 645 |
| PsuI | RGATCY | 1 cut(s) | 600 |
| PvuI | CGATCG | 1 cut(s) | 57 |
| RsaI | GTAC | 5 cut(s) | 131, 494, 704, 912, 917 |
| RsaNI | GTAC | 5 cut(s) | 130, 493, 703, 911, 916 |
| RseI | CAYNNNNRTG | 1 cut(s) | 818 |
| SacI | GAGCTC | 1 cut(s) | 180 |
| SaqAI | TTAA | 3 cut(s) | 276, 587, 855 |
| SatI | GCNGC | 4 cut(s) | 304, 341, 500, 594 |
| Sau3AI | GATC | 9 cut(s) | 54, 205, 210, 471, 540, 574, 600, 670, 799 |
| SbfI | CCTGCAGG | 1 cut(s) | 645 |
| ScaI | AGTACT | 2 cut(s) | 494, 704 |
| SchI | GAGTC | 2 cut(s) | 56, 77 |
| ScrFI | CCNGG | 4 cut(s) | 238, 481, 520, 762 |
| SdaI | CCTGCAGG | 1 cut(s) | 645 |
| SduI | GDGCHC | 2 cut(s) | 180, 234 |
| SexAI | ACCWGGT | 1 cut(s) | 760 |
| SfaNI | GCATC | 1 cut(s) | 156 |
| SfcI | CTRYAG | 1 cut(s) | 641 |
| SfuI | TTCGAA | 1 cut(s) | 464 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 818 |
| SmlI | CTYRAG | 1 cut(s) | 179 |
| SmoI | CTYRAG | 1 cut(s) | 179 |
| SnaBI | TACGTA | 1 cut(s) | 910 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 645 |
| Sse9I | AATT | 3 cut(s) | 184, 273, 558 |
| SsiI | CCGC | 4 cut(s) | 30, 84, 500, 836 |
| SstI | GAGCTC | 1 cut(s) | 180 |
| StyD4I | CCNGG | 4 cut(s) | 236, 479, 518, 760 |
| StyI | CCWWGG | 1 cut(s) | 929 |
| TaaI | ACNGT | 6 cut(s) | 385, 437, 707, 915, 949, 971 |
| TaiI | ACGT | 2 cut(s) | 679, 912 |
| TaqI | TCGA | 4 cut(s) | 47, 53, 464, 568 |
| TasI | AATT | 3 cut(s) | 184, 273, 558 |
| TatI | WGTACW | 2 cut(s) | 492, 702 |
| TauI | GCSGC | 1 cut(s) | 502 |
| TfiI | GAWTC | 1 cut(s) | 427 |
| Tru1I | TTAA | 3 cut(s) | 276, 587, 855 |
| Tru9I | TTAA | 3 cut(s) | 276, 587, 855 |
| TscAI | CASTG | 2 cut(s) | 442, 964 |
| TseFI | GTSAC | 2 cut(s) | 483, 744 |
| TseI | GCWGC | 3 cut(s) | 303, 340, 593 |
| Tsp45I | GTSAC | 2 cut(s) | 483, 744 |
| TspDTI | ATGAA | 4 cut(s) | 440, 594, 843, 926 |
| TspGWI | ACGGA | 1 cut(s) | 587 |
| TspRI | CASTG | 2 cut(s) | 442, 964 |
| VspI | ATTAAT | 1 cut(s) | 276 |
| XapI | RAATTY | 1 cut(s) | 184 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 758 |
| ZrmI | AGTACT | 2 cut(s) | 494, 704 |
| Zsp2I | ATGCAT | 1 cut(s) | 249 |