Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0000786

Physical Location & Seq

Genomic Coordinates Forward (+)

6658271 .. 6664273

Gene Structure 6003 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g11760.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGCTAACTTGTTCACCTTCCTTCCCACAAATTCATACATGCTTTCTTTCTTCTTGTGTTTCTATCTGTTTCTGGATCATGAACAACCCCAAGATGAATCACTTCCATTTATGTGTTTTTACTATCATCTTCACAACCTTGTTCAGACAAGCCTTTTCTGTAGATTCGAGCTACTATGAGGCTTGCAAGCCTCAAACATGTGGGAATGGTCCGAATATAAGCTACCCTTTTTGGCTTTCGGATCAACAAGAATCCTATTGTGGCTATCCTAGTTTCAAACTTGTCTGCAAGGACAAAAATCCAGTGCTTGCTATTTCCAACTCTGATTATATCATCAAAGAAATCTTTTACTCAAACCAGACATTTCTCGTAGCCATCTCTGCTGTCTATGAAGATGAATGTCCTCTCCCTCTACGCAACTTCAGCCTTGATCGAACACCTTTCAACTATAGTTCCAAGAATGCTGATTTTTCCTTCTTCTACAACTGCTCACAAAAACCTTTAGACTACTACGTGTTTACATATCCTATTAGCTGTGCTAGCAATTCCACCTCTCATTCTTTTGCTACTATTCACAAAGAGGTGTTGAAGTACATGAACCATACATTAGTAGACTCATGTGAGTCCCCCGTTGATGTACCGGTGGATTATTTTAGGGCTGCTGGTGTGCATAGCATGTTGAAAATGAGTTATACAGATATCTTGAAGATGGGGTTCCTTTTGAATTGGACTGCACAAGATTGCGGCAATTGTGAGAGGAGTGGTGGGCGGTGTGGATTCGATAAAAATGAAGTTATCTGTTTTTGCAGTGACAGATCTCATGACAAAACCTGTGATGATGGCACTAAGTTCAACTGGAAATTGAAGGTTGTGGTAGGTCTTTGTTCGGTTATTGGAACTACTGCTGCAATGTGCTTCATTTTCTTTATATGGCGACGCCGCAACAGAAATCGATATGGTCCATCATCATCCTATGCATCTCGAAGCATCTTTTCTAAAAGCTATTCCAGAAGTGATACTGAAAAGGGGAGTGCGTACCTTGGAGTTCATGTCTTCACCTACAAAGAACTTGAACAAGCAACAAACTATTTCGATTCATCAAAAGAACTTGGCGATGGAGGTTTTGGCACAGTATACTATGGAAAAGTCCGTGATGGACGATCAGTTGCTGTCAAGCGCCTTTATGAAACCAATTACAAGAGAGTTGAGCAGTTCATGAATGAAATTGAGATTTTGGCTCGCTTACGCCACCAAAACCTTGTTTTACTTTATGGATGCACCTCTCGTCATAGCCGTGAGCTCCTCCTTGTATACGAATATGTTCCTAATGGAACTCTTGCTGATCATCTTCACGGTGGAAAAGCAAAACCAGGTGCACTGCCATGGCATACTCGAATCAACATTGCCGTAGAAACTGCAAGTGCATTGTCCTATCTTCATGCGTCTGAGATCATCCACCGAGATGTGAAAACCACTAACATTCTCCTTGACAACAATTTCTGTGTGAAAGTAGCAGATTTTGGACTATCTCGTCTCTTCCCAACGGATGTCACCCATATCTCAACTGCTCCACAAGGAACTCCAGGTTATGTTGATCCTGATTATAACCAATGCTACCAGCTTACTACTAAGAGTGATGTCTACAGCTTCGGGGTGGTCTTGGTTGAACTCATATCATCCTTGCCTGCTGTTGATATCACAAGGCATCGACAGGAGATCAATTTATCAAACATGGCTATCAACAAGATTCAGAAACATGCATTAGATGAGCTTGTGGATCCATCCCTGGGGTATGAATCAGACTTTAGAGTAAGAAAAATGATCAATGCAGTGGCAGAATTAGCTTTTCGGTGCCTGCAAAATGAGACCGACATGAGACCTTCTATGATGGATGTGGAAAATGAACTAAAGAGGATACAGAGTGATGATTTTAGTAAAGAAAAGGCAGAGGAAATTGAAATTTCAGCTGATGATGTTGTACTGCTAAAGAGTGGTCCTCTGGAAGCTTCACCAGATTCAGTAGATAGGGTTAGCATGTCTCCAAAACCAAATGATAAAACTGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010228 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023052 GO:0031668 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0036211 GO:0042221 GO:0042631 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0104004 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

689

Amino Acids

77.98

Weight (kDa)

6.36

Isoelectric Point (pI)

43.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	62 - 124	1.5e-18	Wall-associated receptor kinase galacturonan-binding
WAK_assoc	PF14380	179 - 272	1.2e-15	Wall-associated receptor kinase C-terminal
Pkinase	PF00069	365 - 632	1.1e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	367 - 636	1.6e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18390 AT1G18390
fragaria_vesca	FvH4_5g11760 FvH4_5g11760 FvH4_5g11790
malus_domestica	MD06G1218900.v1.1 MD06G1219200.v1.1 MD14G1228700.v1.1
prunus_persica	Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1
pyrus_communis	pycom06g19560 pycom06g19580 pycom14g19000
rosa_chinensis	RchiOBHm_Chr7g0185891 RchiOBHm_Chr7g0185941 RchiOBHm_Chr7g0185971 RchiOBHm_Chr7g0186001 RchiOBHm_Chr7g0186021 RchiOBHm_Chr7g0209991 RchiOBHm_Chr7g0210001
rosa_laevigata	RLG00000003071 RLG00000004872 RLG00000004873 RLG00000004875 RLG00000005413
rosa_multiflora	Rmu_co8007212.1_g000001 Rmu_co8076798.1_g000001 Rmu_sc0000194.1_g000013 Rmu_sc0000194.1_g000017 Rmu_sc0000194.1_g000019 Rmu_sc0004509.1_g000017 Rmu_sc0004509.1_g000018 Rmu_sc0005665.1_g000002 Rmu_sc0005665.1_g000004 Rmu_sc0005665.1_g000020 Rmu_sc0005665.1_g000023 Rmu_sc0005665.1_g000035
rosa_roxburghii	Rroxscaffold_1G00039510 Rroxscaffold_3G00248670 Rroxscaffold_3G00257880 Rroxscaffold_3G00268500 Rroxscaffold_3G00268510 Rroxscaffold_3G00268530 Rroxscaffold_3G00268580
rosa_rugosa	Rorug06G0471800 Rorug07G0117900
rosa_samantha	Rh1BG104700 Rh4CG290300 Rh7AG070300 Rh7AG070400 Rh7AG070600 Rh7AG251700 Rh7BG086300 Rh7BG086400 Rh7BG246300 Rh7CG077400 Rh7CG077800 Rh7CG078000 Rh7CG268500 Rh7DG077400 Rh7DG077600 Rh7DG077900 Rh7DG078000 Rh7DG258500
rosa_wichuraiana	Rw7G006440 Rw7G006470 Rw7G006480 Rw7G021370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1605
AasI	GACNNNNNNGTC	1 cut(s)	1530
AccB1I	GGYRCC	1 cut(s)	1851
AccI	GTMKAC	4 cut(s)	612, 1134, 1311, 1641
AciI	CCGC	3 cut(s)	744, 769, 940
AclWI	GGATC	5 cut(s)	83, 249, 1589, 1772, 1785
AcsI	RAATTY	2 cut(s)	30, 1959
AcuI	CTGAAG	1 cut(s)	406
AcyI	GRCGYC	1 cut(s)	937
AfaI	GTAC	4 cut(s)	593, 639, 1037, 1980
AfiI	CCNNNNNNNGG	1 cut(s)	1787
AflIII	ACRYGT	2 cut(s)	197, 513
AgeI	ACCGGT	1 cut(s)	640
AjnI	CCWGG	3 cut(s)	1369, 1582, 1785
Alw21I	GWGCWC	2 cut(s)	1302, 1378
Alw26I	GTCTC	4 cut(s)	1538, 1859, 1870, 2043
Alw44I	GTGCAC	1 cut(s)	1374
AlwI	GGATC	5 cut(s)	83, 249, 1589, 1772, 1785
AlwNI	CAGNNNCTG	1 cut(s)	1169
ApaLI	GTGCAC	1 cut(s)	1374
ApeKI	GCWGC	2 cut(s)	659, 905
ApoI	RAATTY	2 cut(s)	30, 1959
AsiGI	ACCGGT	1 cut(s)	640
Asp700I	GAANNNNTTC	2 cut(s)	101, 1320
AspLEI	GCGC	1 cut(s)	1179
AspS9I	GGNCC	3 cut(s)	209, 959, 1994
AsuHPI	GGTGA	4 cut(s)	6, 1048, 1543, 2001
AsuNHI	GCTAGC	1 cut(s)	539
AvaII	GGWCC	3 cut(s)	209, 959, 1994
BaeGI	GKGCMC	1 cut(s)	1378
BamHI	GGATCC	1 cut(s)	1777
BanI	GGYRCC	1 cut(s)	1851
BanII	GRGCYC	1 cut(s)	1302
BbsI	GAAGAC	1 cut(s)	1045
Bbv12I	GWGCWC	2 cut(s)	1302, 1378
BbvI	GCAGC	2 cut(s)	646, 892
BccI	CCATC	8 cut(s)	383, 703, 833, 970, 1109, 1148, 1789, 1882
BceAI	ACGGC	2 cut(s)	1278, 1391
BciT130I	CCWGG	3 cut(s)	1371, 1584, 1787
BciVI	GTATCC	1 cut(s)	1908
BclI	TGATCA	2 cut(s)	1342, 1821
BcoDI	GTCTC	4 cut(s)	1538, 1859, 1870, 2043
BfaI	CTAG	2 cut(s)	270, 540
BfmI	CTRYAG	3 cut(s)	159, 448, 1642
BfoI	RGCGCY	1 cut(s)	1180
BfuI	GTATCC	1 cut(s)	1908
BglII	AGATCT	1 cut(s)	815
BisI	GCNGC	4 cut(s)	660, 745, 906, 940
BlsI	GCNGC	4 cut(s)	661, 746, 907, 941
Bme1390I	CCNGG	3 cut(s)	1371, 1584, 1787
Bme18I	GGWCC	3 cut(s)	209, 959, 1994
BmgT120I	GGNCC	3 cut(s)	209, 959, 1994
BmiI	GGNNCC	3 cut(s)	716, 1779, 1853
BmrFI	CCNGG	3 cut(s)	1371, 1584, 1787
BmsI	GCATC	4 cut(s)	986, 996, 1265, 1714
BmtI	GCTAGC	1 cut(s)	543
BpiI	GAAGAC	1 cut(s)	1045
BplI	GAGNNNNNCTC	2 cut(s)	1981, 2013
BpmI	CTGGAG	1 cut(s)	1566
Bsa29I	ATCGAT	1 cut(s)	952
BsaAI	YACGTR	1 cut(s)	514
BsaHI	GRCGYC	1 cut(s)	937
BsaI	GGTCTC	2 cut(s)	1859, 1870
BsaJI	CCNNGG	4 cut(s)	1039, 1382, 1785, 1786
BsaWI	WCCGGW	1 cut(s)	640
BsaXI	ACNNNNNCTCC	2 cut(s)	1035, 1065
Bsc4I	CCNNNNNNNGG	1 cut(s)	1787
Bse118I	RCCGGY	1 cut(s)	640
Bse1I	ACTGG	3 cut(s)	302, 860, 2065
Bse3DI	GCAATG	2 cut(s)	915, 1401
BseBI	CCWGG	3 cut(s)	1371, 1584, 1787
BseCI	ATCGAT	1 cut(s)	952
BseDI	CCNNGG	4 cut(s)	1039, 1382, 1785, 1786
BseGI	GGATG	7 cut(s)	968, 1280, 1452, 1552, 1676, 1781, 1897
BseLI	CCNNNNNNNGG	1 cut(s)	1787
BseMI	GCAATG	2 cut(s)	915, 1401
BseMII	CTCAG	1 cut(s)	1437
BseNI	ACTGG	3 cut(s)	302, 860, 2065
BseRI	GAGGAG	2 cut(s)	772, 1292
BseSI	GKGCMC	1 cut(s)	1378
BseXI	GCAGC	2 cut(s)	646, 892
BsgI	GTGCAG	1 cut(s)	717
BshNI	GGYRCC	1 cut(s)	1851
BshTI	ACCGGT	1 cut(s)	640
BshVI	ATCGAT	1 cut(s)	952
BsiHKAI	GWGCWC	2 cut(s)	1302, 1378
BsiSI	CCGG	1 cut(s)	641
BslFI	GGGAC	1 cut(s)	610
BslI	CCNNNNNNNGG	1 cut(s)	1787
BsmAI	GTCTC	4 cut(s)	1538, 1859, 1870, 2043
BsmBI	CGTCTC	1 cut(s)	1538
BsmFI	GGGAC	1 cut(s)	610
BsmI	GAATGC	1 cut(s)	466
Bso31I	GGTCTC	2 cut(s)	1859, 1870
Bsp1286I	GDGCHC	2 cut(s)	1302, 1378
Bsp19I	CCATGG	1 cut(s)	1382
BspACI	CCGC	3 cut(s)	744, 769, 940
BspCNI	CTCAG	1 cut(s)	1438
BspDI	ATCGAT	1 cut(s)	952
BspHI	TCATGA	3 cut(s)	78, 820, 1215
BspLI	GGNNCC	3 cut(s)	716, 1779, 1853
BspOI	GCTAGC	1 cut(s)	543
BspPI	GGATC	5 cut(s)	83, 249, 1589, 1772, 1785
BspT107I	GGYRCC	1 cut(s)	1851
BspTNI	GGTCTC	2 cut(s)	1859, 1870
BsrDI	GCAATG	2 cut(s)	915, 1401
BsrFI	RCCGGY	1 cut(s)	640
BsrI	ACTGG	3 cut(s)	302, 860, 2065
BssAI	RCCGGY	1 cut(s)	640
BssECI	CCNNGG	4 cut(s)	1039, 1382, 1785, 1786
BssNAI	GTATAC	2 cut(s)	1135, 1312
BssNI	GRCGYC	1 cut(s)	937
BssT1I	CCWWGG	2 cut(s)	1039, 1382
Bst1107I	GTATAC	2 cut(s)	1135, 1312
Bst2UI	CCWGG	3 cut(s)	1371, 1584, 1787
Bst4CI	ACNGT	2 cut(s)	1132, 1355
Bst6I	CTCTTC	1 cut(s)	1541
BstACI	GRCGYC	1 cut(s)	937
BstBAI	YACGTR	1 cut(s)	514
BstC8I	GCNNGC	7 cut(s)	184, 188, 309, 541, 1240, 1686, 1856
BstDEI	CTNAG	3 cut(s)	846, 1446, 1629
BstDSI	CCRYGG	1 cut(s)	1382
BstF5I	GGATG	7 cut(s)	968, 1280, 1452, 1552, 1676, 1781, 1897
BstH2I	RGCGCY	1 cut(s)	1180
BstHHI	GCGC	1 cut(s)	1179
BstMAI	GTCTC	4 cut(s)	1538, 1859, 1870, 2043
BstMWI	GCNNNNNNNGC	4 cut(s)	380, 423, 540, 1841
BstNI	CCWGG	3 cut(s)	1371, 1584, 1787
BstNSI	RCATGY	5 cut(s)	42, 201, 679, 1760, 2038
BstSCI	CCNGG	3 cut(s)	1369, 1582, 1785
BstSFI	CTRYAG	3 cut(s)	159, 448, 1642
BstSLI	GKGCMC	1 cut(s)	1378
BstV1I	GCAGC	2 cut(s)	646, 892
BstV2I	GAAGAC	1 cut(s)	1045
BstX2I	RGATCY	2 cut(s)	815, 1777
BstYI	RGATCY	2 cut(s)	815, 1777
BstZ17I	GTATAC	2 cut(s)	1135, 1312
Bsu15I	ATCGAT	1 cut(s)	952
BsuI	GTATCC	1 cut(s)	1908
BsuTUI	ATCGAT	1 cut(s)	952
BtgI	CCRYGG	1 cut(s)	1382
BtgZI	GCGATG	1 cut(s)	1128
BtsCI	GGATG	7 cut(s)	968, 1280, 1452, 1552, 1676, 1781, 1897
BtsI	GCAGTG	3 cut(s)	814, 1376, 1836
BtsIMutI	CAGTG	4 cut(s)	309, 814, 1376, 1836
Cac8I	GCNNGC	7 cut(s)	184, 188, 309, 541, 1240, 1686, 1856
CaiI	CAGNNNCTG	1 cut(s)	1169
CciI	TCATGA	3 cut(s)	78, 820, 1215
CfoI	GCGC	1 cut(s)	1179
Cfr10I	RCCGGY	1 cut(s)	640
Cfr13I	GGNCC	3 cut(s)	209, 959, 1994
ClaI	ATCGAT	1 cut(s)	952
CseI	GACGC	2 cut(s)	945, 1431
CsiI	ACCWGGT	1 cut(s)	1369
Csp6I	GTAC	4 cut(s)	592, 638, 1036, 1979
CspAI	ACCGGT	1 cut(s)	640
CviQI	GTAC	4 cut(s)	592, 638, 1036, 1979
DdeI	CTNAG	3 cut(s)	846, 1446, 1629
DrdI	GACNNNNNNGTC	1 cut(s)	1530
DseDI	GACNNNNNNGTC	1 cut(s)	1530
Eam1104I	CTCTTC	1 cut(s)	1541
EarI	CTCTTC	1 cut(s)	1541
Ecl136II	GAGCTC	1 cut(s)	1300
Eco130I	CCWWGG	2 cut(s)	1039, 1382
Eco24I	GRGCYC	1 cut(s)	1302
Eco31I	GGTCTC	2 cut(s)	1859, 1870
Eco32I	GATATC	2 cut(s)	700, 1696
Eco47I	GGWCC	3 cut(s)	209, 959, 1994
Eco53kI	GAGCTC	1 cut(s)	1300
Eco57I	CTGAAG	1 cut(s)	406
EcoICRI	GAGCTC	1 cut(s)	1300
EcoRII	CCWGG	3 cut(s)	1369, 1582, 1785
EcoRV	GATATC	2 cut(s)	700, 1696
EcoT14I	CCWWGG	2 cut(s)	1039, 1382
EcoT22I	ATGCAT	2 cut(s)	979, 1762
EcoT38I	GRGCYC	1 cut(s)	1302
ErhI	CCWWGG	2 cut(s)	1039, 1382
Esp3I	CGTCTC	1 cut(s)	1538
FalI	AAGNNNNNCTT	2 cut(s)	211, 243
FaqI	GGGAC	1 cut(s)	610
FbaI	TGATCA	2 cut(s)	1342, 1821
FblI	GTMKAC	4 cut(s)	612, 1134, 1311, 1641
Fnu4HI	GCNGC	4 cut(s)	660, 745, 906, 940
FokI	GGATG	7 cut(s)	955, 1287, 1439, 1559, 1663, 1768, 1904
FriOI	GRGCYC	1 cut(s)	1302
Fsp4HI	GCNGC	4 cut(s)	660, 745, 906, 940
FspBI	CTAG	2 cut(s)	270, 540
GlaI	GCGC	1 cut(s)	1178
GluI	GCNGC	4 cut(s)	660, 745, 906, 940
GsuI	CTGGAG	1 cut(s)	1566
HaeII	RGCGCY	1 cut(s)	1180
HapII	CCGG	1 cut(s)	641
HgaI	GACGC	2 cut(s)	945, 1431
HhaI	GCGC	1 cut(s)	1179
Hin1I	GRCGYC	1 cut(s)	937
Hin6I	GCGC	1 cut(s)	1177
HinP1I	GCGC	1 cut(s)	1177
HindIII	AAGCTT	1 cut(s)	2004
HpaII	CCGG	1 cut(s)	641
HphI	GGTGA	4 cut(s)	6, 1048, 1543, 2001
Hpy166II	GTNNAC	7 cut(s)	14, 519, 613, 1135, 1312, 1376, 1642
Hpy188I	TCNGA	7 cut(s)	146, 213, 241, 325, 1447, 1752, 1801
Hpy188III	TCNNGA	9 cut(s)	73, 79, 703, 821, 981, 1008, 1216, 1598, 2000
Hpy8I	GTNNAC	7 cut(s)	14, 519, 613, 1135, 1312, 1376, 1642
Hpy99I	CGWCG	1 cut(s)	939
HpyAV	CCTTC	5 cut(s)	27, 31, 484, 859, 1890
HpyCH4III	ACNGT	2 cut(s)	1132, 1355
HpyCH4IV	ACGT	1 cut(s)	513
HpyF10VI	GCNNNNNNNGC	4 cut(s)	380, 423, 540, 1841
HpyF3I	CTNAG	3 cut(s)	846, 1446, 1629
HpySE526I	ACGT	1 cut(s)	513
Hsp92I	GRCGYC	1 cut(s)	937
HspAI	GCGC	1 cut(s)	1177
Ksp22I	TGATCA	2 cut(s)	1342, 1821
LmnI	GCTCC	2 cut(s)	1305, 1573
Lsp1109I	GCAGC	2 cut(s)	646, 892
LweI	GCATC	4 cut(s)	986, 996, 1265, 1714
MabI	ACCWGGT	1 cut(s)	1369
MaeI	CTAG	2 cut(s)	270, 540
MaeII	ACGT	1 cut(s)	513
MaeIII	GTNAC	2 cut(s)	809, 1549
MboII	GAAGA	9 cut(s)	42, 121, 404, 469, 718, 1045, 1340, 1427, 1528
MfeI	CAATTG	1 cut(s)	748
MflI	RGATCY	2 cut(s)	815, 1777
MhlI	GDGCHC	2 cut(s)	1302, 1378
MlyI	GAGTC	2 cut(s)	608, 632
MmeI	TCCRAC	1 cut(s)	342
Mph1103I	ATGCAT	2 cut(s)	979, 1762
MroXI	GAANNNNTTC	2 cut(s)	101, 1320
MseI	TTAA	1 cut(s)	2065
MslI	CAYNNNNRTG	4 cut(s)	111, 1293, 1381, 1461
MspA1I	CMGCKG	1 cut(s)	1967
MspI	CCGG	1 cut(s)	641
MspR9I	CCNGG	3 cut(s)	1371, 1584, 1787
MunI	CAATTG	1 cut(s)	748
Mva1269I	GAATGC	1 cut(s)	466
MvaI	CCWGG	3 cut(s)	1371, 1584, 1787
MwoI	GCNNNNNNNGC	4 cut(s)	380, 423, 540, 1841
NcoI	CCATGG	1 cut(s)	1382
NheI	GCTAGC	1 cut(s)	539
NlaIV	GGNNCC	3 cut(s)	716, 1779, 1853
NmuCI	GTSAC	2 cut(s)	809, 1549
NsiI	ATGCAT	2 cut(s)	979, 1762
NspI	RCATGY	5 cut(s)	42, 201, 679, 1760, 2038
PagI	TCATGA	3 cut(s)	78, 820, 1215
PasI	CCCWGGG	1 cut(s)	1786
PciI	ACATGT	1 cut(s)	197
PcsI	WCGNNNNNNNCGW	1 cut(s)	1291
PctI	GAATGC	1 cut(s)	466
PdmI	GAANNNNTTC	2 cut(s)	101, 1320
PfeI	GAWTC	9 cut(s)	97, 164, 251, 777, 1094, 1395, 1747, 1796, 2015
PinAI	ACCGGT	1 cut(s)	640
PkrI	GCNGC	4 cut(s)	661, 746, 907, 941
PleI	GAGTC	2 cut(s)	608, 631
PpsI	GAGTC	2 cut(s)	608, 631
Ppu21I	YACGTR	1 cut(s)	514
PscI	ACATGT	1 cut(s)	197
PsiI	TTATAA	1 cut(s)	1605
Psp124BI	GAGCTC	1 cut(s)	1302
Psp6I	CCWGG	3 cut(s)	1369, 1582, 1785
PspGI	CCWGG	3 cut(s)	1369, 1582, 1785
PspN4I	GGNNCC	3 cut(s)	716, 1779, 1853
PspPI	GGNCC	3 cut(s)	209, 959, 1994
PstNI	CAGNNNCTG	1 cut(s)	1169
PsuI	RGATCY	2 cut(s)	815, 1777
PvuII	CAGCTG	1 cut(s)	1967
RsaI	GTAC	4 cut(s)	593, 639, 1037, 1980
RsaNI	GTAC	4 cut(s)	592, 638, 1036, 1979
RseI	CAYNNNNRTG	4 cut(s)	111, 1293, 1381, 1461
SacI	GAGCTC	1 cut(s)	1302
SaqAI	TTAA	1 cut(s)	2065
SatI	GCNGC	4 cut(s)	660, 745, 906, 940
Sau96I	GGNCC	3 cut(s)	209, 959, 1994
SchI	GAGTC	2 cut(s)	608, 632
ScrFI	CCNGG	3 cut(s)	1371, 1584, 1787
SduI	GDGCHC	2 cut(s)	1302, 1378
SexAI	ACCWGGT	1 cut(s)	1369
SfaNI	GCATC	4 cut(s)	986, 996, 1265, 1714
SfcI	CTRYAG	3 cut(s)	159, 448, 1642
SinI	GGWCC	3 cut(s)	209, 959, 1994
SmiMI	CAYNNNNRTG	4 cut(s)	111, 1293, 1381, 1461
SsiI	CCGC	3 cut(s)	744, 769, 940
SspMI	CTAG	2 cut(s)	270, 540
SstI	GAGCTC	1 cut(s)	1302
StyD4I	CCNGG	3 cut(s)	1369, 1582, 1785
StyI	CCWWGG	2 cut(s)	1039, 1382
TaaI	ACNGT	2 cut(s)	1132, 1355
TaiI	ACGT	1 cut(s)	516
TaqI	TCGA	8 cut(s)	167, 433, 780, 952, 982, 1092, 1393, 1708
TaqII	GACCGA	1 cut(s)	1883
TatI	WGTACW	2 cut(s)	591, 1978
TauI	GCSGC	2 cut(s)	747, 942
TfiI	GAWTC	9 cut(s)	97, 164, 251, 777, 1094, 1395, 1747, 1796, 2015
Tru1I	TTAA	1 cut(s)	2065
Tru9I	TTAA	1 cut(s)	2065
TscAI	CASTG	4 cut(s)	309, 814, 1383, 1836
TseFI	GTSAC	2 cut(s)	809, 1549
TseI	GCWGC	2 cut(s)	659, 905
Tsp45I	GTSAC	2 cut(s)	809, 1549
TspGWI	ACGGA	2 cut(s)	1139, 1559
TspRI	CASTG	4 cut(s)	309, 814, 1383, 1836
VneI	GTGCAC	1 cut(s)	1374
VpaK11BI	GGWCC	3 cut(s)	209, 959, 1994
XapI	RAATTY	2 cut(s)	30, 1959
XceI	RCATGY	5 cut(s)	42, 201, 679, 1760, 2038
XmiI	GTMKAC	4 cut(s)	612, 1134, 1311, 1641
XmnI	GAANNNNTTC	2 cut(s)	101, 1320
XspI	CTAG	2 cut(s)	270, 540
Zsp2I	ATGCAT	2 cut(s)	979, 1762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.