Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0000786

Physical Location & Seq

Genomic Coordinates Forward (+)

4941664 .. 4952219

Gene Structure 10556 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG070400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGAATCCCTTCCATTTATGTGTTTTTAGTATCATCTTCACAACCATAGTCAGTCTAGCCTTTTCTGTAGACTCTAGCTACTACGAGGCTTGCAAGCCTCAAACATGTGGGAATGGTCCGAATATAAGCTACCCTTTTTGGCTTTCGGATCAACATGAATCCTATTGTGGCTATCCTAGTTTCAAGCTAGCTTGCAAGGACAAAAATCCAACACTTACTATTTCTGATGATGATTATATCATCAAAGAAATCTTTTACTCAAACCATTCGTTTCTCGTGGCCAGTGGTGCTGCGTATGAAGATGAATGTCCCCTTCCTCTACACAGCTTCAGGCTCGATCGAACACCTTTCAATTATAGTTCCAATCATGTTGATTTTTCCTTGTTCTACAACTGTTCCCAAGAACCTGTGAACAACATGCTTACATATTCTATTACATGTGCAAGCAATTCCACACTTCATTCTTTTGCTACTATTCACAAAGAGGTATTGCAGTACATGAACCAAACATTATTAGACTCATGCAAGTCTTCGGTTGTTTTACCTTTGGATTATCATGAGGCTGGTGGTGTGAATACCTGGTTGAAAATGAATTATACTGAAATCTTGAAGATGGGGTTCGTTTTGAATTGGACTGCACAAAATTGCAGCAATTGTGAGATGAGCGGTGGGCGCTGTGGATTCGATAACAATGAATTTGTCTGTTTTTGCAGTGATAGACCTCATGAGAAAAACTGTGATGATGACTCTAGGTTCAGCTGGAAATTGAAGGTTGTCGTAGGTCTTTGCTCGGTTATTGGAACTATAGCCGTAATGTGCTTCATTTTCTTTATATGGCGACGCCGCAACAGAAATCGATATGGTCCATCATCCTATGCATCTCGAAGCATCTATTCTAAAAGCTATTCCAGAAGTGATACTGAGAAGGGAAGTGCATACCTTGGAGTTCATGTCTTCACCTACAAGGAACTTGAACAAGCAACAAACTATTTCGACTCCTCAAAAGAAATTGGGGATGGAGGCTTTGGCACAGTGTACTATGGAAAAGTTCGTGATGGGCGATCAGTTGCTGTCAAGCGTCTTTACGAAACCAATTACAAGAGAGTTGAGCAGTTCATGAATGAAATCGAGATTTTAGCTCGCCTACGCCACCAAAACCTTGTCTTACTCTATGGATGCACCTCTCGTCACAGCCGTGAACTCCTCCTTGTCTATGAATATGTTCCCAACGGAACTCTTGCTGATCATCTTCACGGTGGAAAAGCAAAACCCGGTGCACTGCCATGGCATACTCGAATCAACATTGCCGTAGAAACTGCAAACTCCACCGCCGATCAATATTGTGGTTACCCTGGTTTTGGTCTCAATTGCTCAGAGTCCGGAGAGCCAATACTCAGTCTCCCAAATAATGACTCCTACCATGTGAAAGACATAAACTTTATTGATTCCACCATCACCCTTGTTGACATCGACGCCTTCGATCAACAATGCCCTAGGGCAAGACACAGTATTAGTGTAGGCACGCTCCCATTGGATTACTCCCCATTGGATGTGAACCTGAGCTTCTACTTTAACTGCACTTCCTTTCCTGATCCTGTTGTGCTTCCCATAATCTGCTTGGGAACATGGGGTACCAAAATGTCTTATGTTTTCACGGAGGGAGAGCAATCAGATGGGTTGGAATGGTCTGAAAGTTGTGAGGAGAATGTGGTGGTGACTGTGATGAAGAGTAAGGAGCTTTATATTGACAAGTTGATTGGTGCTTTTGGAGGACTTATGAACCAGGGGTTTGTGCTTAACTGGACCACGGCGAAGGAGTGCGCTTCGTGTGAAAGTGGTGGTGGTTTGTGTGGGTACAACCCCACTAAAGCTGATGAGTTTCTCTGCTTCTGCAAATATAGTGATGGCCTATGCGAGAAGAAAGGTATGCCGTATGCTGCTTTGTTCCTTAATCCTTTCGTAACTTTAAAATCTGCTTGGGCCCAGTTTTGGTATGCCTTCTGTTTGGGTCATATTGATGGGCTTGGGTATGTTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010228 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023052 GO:0031668 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0036211 GO:0042221 GO:0042631 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0104004 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

679

Amino Acids

76.49

Weight (kDa)

5.58

Isoelectric Point (pI)

42.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	31 - 94	3.5e-18	Wall-associated receptor kinase galacturonan-binding
WAK_assoc	PF14380	147 - 240	2e-16	Wall-associated receptor kinase C-terminal
Pkinase	PF00069	332 - 418	4.7e-15	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	334 - 440	1.7e-17	Protein tyrosine and serine/threonine kinase
GUB_WAK_bind	PF13947	445 - 489	2.4e-10	Wall-associated receptor kinase galacturonan-binding
WAK_assoc	PF14380	544 - 632	4.6e-17	Wall-associated receptor kinase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18390 AT1G18390
fragaria_vesca	FvH4_5g11760 FvH4_5g11760 FvH4_5g11790
malus_domestica	MD06G1218900.v1.1 MD06G1219200.v1.1 MD14G1228700.v1.1
prunus_persica	Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1
pyrus_communis	pycom06g19560 pycom06g19580 pycom14g19000
rosa_chinensis	RchiOBHm_Chr7g0185891 RchiOBHm_Chr7g0185941 RchiOBHm_Chr7g0185971 RchiOBHm_Chr7g0186001 RchiOBHm_Chr7g0186021 RchiOBHm_Chr7g0209991 RchiOBHm_Chr7g0210001
rosa_laevigata	RLG00000003071 RLG00000004872 RLG00000004873 RLG00000004875 RLG00000005413
rosa_multiflora	Rmu_co8007212.1_g000001 Rmu_co8076798.1_g000001 Rmu_sc0000194.1_g000013 Rmu_sc0000194.1_g000017 Rmu_sc0000194.1_g000019 Rmu_sc0004509.1_g000017 Rmu_sc0004509.1_g000018 Rmu_sc0005665.1_g000002 Rmu_sc0005665.1_g000004 Rmu_sc0005665.1_g000020 Rmu_sc0005665.1_g000023 Rmu_sc0005665.1_g000035
rosa_roxburghii	Rroxscaffold_1G00039510 Rroxscaffold_3G00248670 Rroxscaffold_3G00257880 Rroxscaffold_3G00268500 Rroxscaffold_3G00268510 Rroxscaffold_3G00268530 Rroxscaffold_3G00268580
rosa_rugosa	Rorug06G0471800 Rorug07G0117900
rosa_samantha	Rh1BG104700 Rh4CG290300 Rh7AG070300 Rh7AG070400 Rh7AG070600 Rh7AG251700 Rh7BG086300 Rh7BG086400 Rh7BG246300 Rh7CG077400 Rh7CG077800 Rh7CG078000 Rh7CG268500 Rh7DG077400 Rh7DG077600 Rh7DG077900 Rh7DG078000 Rh7DG258500
rosa_wichuraiana	Rw7G006440 Rw7G006470 Rw7G006480 Rw7G021370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1631
AccB1I	GGYRCC	1 cut(s)	1631
AccBSI	CCGCTC	1 cut(s)	666
AccI	GTMKAC	1 cut(s)	69
AccIII	TCCGGA	1 cut(s)	1379
AciI	CCGC	3 cut(s)	666, 844, 1329
AclWI	GGATC	2 cut(s)	156, 1586
AcoI	YGGCCR	1 cut(s)	279
AcsI	RAATTY	1 cut(s)	695
AcuI	CTGAAG	1 cut(s)	313
AcyI	GRCGYC	2 cut(s)	841, 1473
AfaI	GTAC	4 cut(s)	497, 1037, 1633, 1856
AfiI	CCNNNNNNNGG	2 cut(s)	1358, 1989
AflIII	ACRYGT	2 cut(s)	104, 437
AgsI	TTSAA	7 cut(s)	184, 352, 586, 610, 628, 769, 974
AjnI	CCWGG	3 cut(s)	578, 1351, 1782
AleI	CACNNNNGTG	1 cut(s)	1194
Alw21I	GWGCWC	1 cut(s)	1279
Alw26I	GTCTC	2 cut(s)	1367, 1403
Alw44I	GTGCAC	1 cut(s)	1275
AlwI	GGATC	2 cut(s)	156, 1586
AlwNI	CAGNNNCTG	1 cut(s)	1070
Aor13HI	TCCGGA	1 cut(s)	1379
AoxI	GGCC	3 cut(s)	279, 1906, 1980
ApaI	GGGCCC	1 cut(s)	1984
ApaLI	GTGCAC	1 cut(s)	1275
ApeKI	GCWGC	3 cut(s)	290, 648, 1937
ApoI	RAATTY	1 cut(s)	695
Asp700I	GAANNNNTTC	2 cut(s)	8, 1221
Asp718I	GGTACC	1 cut(s)	1631
AspA2I	CCTAGG	1 cut(s)	1493
AspLEI	GCGC	2 cut(s)	675, 1823
AspS9I	GGNCC	5 cut(s)	116, 863, 1803, 1980, 1981
AsuC2I	CCSGG	1 cut(s)	1272
AsuHPI	GGTGA	3 cut(s)	949, 1447, 1726
AsuNHI	GCTAGC	1 cut(s)	187
AvaII	GGWCC	3 cut(s)	116, 863, 1803
AvrII	CCTAGG	1 cut(s)	1493
BaeGI	GKGCMC	2 cut(s)	1279, 1984
BalI	TGGCCA	1 cut(s)	281
BanI	GGYRCC	1 cut(s)	1631
BanII	GRGCYC	1 cut(s)	1984
BauI	CACGAG	1 cut(s)	275
BbsI	GAAGAC	2 cut(s)	522, 946
Bbv12I	GWGCWC	1 cut(s)	1279
BbvI	GCAGC	3 cut(s)	277, 660, 1924
BccI	CCATC	8 cut(s)	607, 874, 1010, 1049, 1460, 1667, 1898, 2012
BceAI	ACGGC	5 cut(s)	794, 1179, 1292, 1824, 1915
BciT130I	CCWGG	3 cut(s)	580, 1353, 1784
BclI	TGATCA	1 cut(s)	1243
BcnI	CCSGG	1 cut(s)	1272
BcoDI	GTCTC	2 cut(s)	1367, 1403
BfaI	CTAG	6 cut(s)	56, 75, 177, 188, 750, 1494
BfmI	CTRYAG	2 cut(s)	66, 804
BfoI	RGCGCY	1 cut(s)	676
BisI	GCNGC	4 cut(s)	291, 649, 844, 1938
BlnI	CCTAGG	1 cut(s)	1493
BlsI	GCNGC	4 cut(s)	292, 650, 845, 1939
Bme1390I	CCNGG	4 cut(s)	580, 1272, 1353, 1784
Bme18I	GGWCC	3 cut(s)	116, 863, 1803
BmgT120I	GGNCC	5 cut(s)	116, 863, 1803, 1980, 1981
BmiI	GGNNCC	2 cut(s)	1633, 1982
BmrFI	CCNGG	4 cut(s)	580, 1272, 1353, 1784
BmrI	ACTGGG	1 cut(s)	1978
BmsI	GCATC	3 cut(s)	887, 897, 1166
BmtI	GCTAGC	1 cut(s)	191
BmuI	ACTGGG	1 cut(s)	1978
BpiI	GAAGAC	2 cut(s)	522, 946
Bpu10I	CCTNAGC	1 cut(s)	1559
BpuMI	CCSGG	1 cut(s)	1272
Bsa29I	ATCGAT	1 cut(s)	856
BsaHI	GRCGYC	2 cut(s)	841, 1473
BsaI	GGTCTC	1 cut(s)	1367
BsaJI	CCNNGG	6 cut(s)	940, 1283, 1351, 1493, 1783, 1806
BsaWI	WCCGGW	1 cut(s)	1379
BsaXI	ACNNNNNCTCC	4 cut(s)	936, 966, 1383, 1413
Bsc4I	CCNNNNNNNGG	2 cut(s)	1358, 1989
Bse1I	ACTGG	3 cut(s)	282, 1805, 1984
Bse3DI	GCAATG	1 cut(s)	1302
BseAI	TCCGGA	1 cut(s)	1379
BseBI	CCWGG	3 cut(s)	580, 1353, 1784
BseCI	ATCGAT	1 cut(s)	856
BseDI	CCNNGG	6 cut(s)	940, 1283, 1351, 1493, 1783, 1806
BseGI	GGATG	4 cut(s)	869, 1021, 1181, 1555
BseLI	CCNNNNNNNGG	2 cut(s)	1358, 1989
BseMI	GCAATG	1 cut(s)	1302
BseMII	CTCAG	4 cut(s)	912, 1386, 1408, 1550
BseNI	ACTGG	3 cut(s)	282, 1805, 1984
BseRI	GAGGAG	3 cut(s)	988, 1193, 1715
BseSI	GKGCMC	2 cut(s)	1279, 1984
BseXI	GCAGC	3 cut(s)	277, 660, 1924
BsgI	GTGCAG	2 cut(s)	621, 1561
Bsh1285I	CGRYCG	1 cut(s)	340
BshFI	GGCC	3 cut(s)	281, 1908, 1982
BshNI	GGYRCC	1 cut(s)	1631
BshVI	ATCGAT	1 cut(s)	856
BsiEI	CGRYCG	1 cut(s)	340
BsiHKAI	GWGCWC	1 cut(s)	1279
BsiSI	CCGG	2 cut(s)	1272, 1380
BslFI	GGGAC	1 cut(s)	294
BslI	CCNNNNNNNGG	2 cut(s)	1358, 1989
BsmAI	GTCTC	2 cut(s)	1367, 1403
BsmFI	GGGAC	1 cut(s)	294
BsnI	GGCC	3 cut(s)	281, 1908, 1982
Bso31I	GGTCTC	1 cut(s)	1367
Bsp120I	GGGCCC	1 cut(s)	1980
Bsp1286I	GDGCHC	2 cut(s)	1279, 1984
Bsp13I	TCCGGA	1 cut(s)	1379
Bsp143I	GATC	7 cut(s)	148, 337, 1061, 1243, 1333, 1480, 1591
Bsp19I	CCATGG	1 cut(s)	1283
BspACI	CCGC	3 cut(s)	666, 844, 1329
BspANI	GGCC	3 cut(s)	281, 1908, 1982
BspCNI	CTCAG	4 cut(s)	913, 1385, 1407, 1551
BspDI	ATCGAT	1 cut(s)	856
BspEI	TCCGGA	1 cut(s)	1379
BspHI	TCATGA	3 cut(s)	556, 724, 1116
BspLI	GGNNCC	2 cut(s)	1633, 1982
BspOI	GCTAGC	1 cut(s)	191
BspPI	GGATC	2 cut(s)	156, 1586
BspT107I	GGYRCC	1 cut(s)	1631
BspTNI	GGTCTC	1 cut(s)	1367
BsrBI	CCGCTC	1 cut(s)	666
BsrDI	GCAATG	1 cut(s)	1302
BsrI	ACTGG	3 cut(s)	282, 1805, 1984
BssECI	CCNNGG	6 cut(s)	940, 1283, 1351, 1493, 1783, 1806
BssMI	GATC	7 cut(s)	148, 337, 1061, 1243, 1333, 1480, 1591
BssNI	GRCGYC	2 cut(s)	841, 1473
BssSI	CACGAG	1 cut(s)	275
BssT1I	CCWWGG	3 cut(s)	940, 1283, 1493
Bst2BI	CACGAG	1 cut(s)	275
Bst2UI	CCWGG	3 cut(s)	580, 1353, 1784
Bst4CI	ACNGT	6 cut(s)	395, 737, 1033, 1256, 1508, 1720
Bst6I	CTCTTC	1 cut(s)	1721
BstACI	GRCGYC	2 cut(s)	841, 1473
BstC8I	GCNNGC	7 cut(s)	91, 95, 189, 193, 445, 1141, 1523
BstDEI	CTNAG	4 cut(s)	921, 1372, 1394, 1559
BstDSI	CCRYGG	2 cut(s)	1283, 1806
BstEII	GGTNACC	1 cut(s)	1346
BstF5I	GGATG	4 cut(s)	869, 1021, 1181, 1555
BstH2I	RGCGCY	1 cut(s)	676
BstHHI	GCGC	2 cut(s)	675, 1823
BstKTI	GATC	7 cut(s)	151, 340, 1064, 1246, 1336, 1483, 1594
BstMAI	GTCTC	2 cut(s)	1367, 1403
BstMBI	GATC	7 cut(s)	148, 337, 1061, 1243, 1333, 1480, 1591
BstMCI	CGRYCG	1 cut(s)	340
BstMWI	GCNNNNNNNGC	2 cut(s)	287, 672
BstNI	CCWGG	3 cut(s)	580, 1353, 1784
BstNSI	RCATGY	3 cut(s)	108, 421, 441
BstPI	GGTNACC	1 cut(s)	1346
BstSCI	CCNGG	4 cut(s)	578, 1270, 1351, 1782
BstSFI	CTRYAG	2 cut(s)	66, 804
BstSLI	GKGCMC	2 cut(s)	1279, 1984
BstV1I	GCAGC	3 cut(s)	277, 660, 1924
BstV2I	GAAGAC	2 cut(s)	522, 946
Bsu15I	ATCGAT	1 cut(s)	856
BsuRI	GGCC	3 cut(s)	281, 1908, 1982
BsuTUI	ATCGAT	1 cut(s)	856
BtgI	CCRYGG	2 cut(s)	1283, 1806
BtsCI	GGATG	4 cut(s)	869, 1021, 1181, 1555
BtsI	GCAGTG	2 cut(s)	718, 1277
BtsIMutI	CAGTG	4 cut(s)	289, 718, 1038, 1277
Cac8I	GCNNGC	7 cut(s)	91, 95, 189, 193, 445, 1141, 1523
CaiI	CAGNNNCTG	1 cut(s)	1070
CciI	TCATGA	3 cut(s)	556, 724, 1116
CfoI	GCGC	2 cut(s)	675, 1823
Cfr13I	GGNCC	5 cut(s)	116, 863, 1803, 1980, 1981
ClaI	ATCGAT	1 cut(s)	856
CseI	GACGC	3 cut(s)	849, 1067, 1481
CsiI	ACCWGGT	1 cut(s)	578
Csp6I	GTAC	4 cut(s)	496, 1036, 1632, 1855
CviQI	GTAC	4 cut(s)	496, 1036, 1632, 1855
DdeI	CTNAG	4 cut(s)	921, 1372, 1394, 1559
DpnI	GATC	7 cut(s)	150, 339, 1063, 1245, 1335, 1482, 1593
DpnII	GATC	7 cut(s)	148, 337, 1061, 1243, 1333, 1480, 1591
DraI	TTTAAA	1 cut(s)	1968
EaeI	YGGCCR	1 cut(s)	279
Eam1104I	CTCTTC	1 cut(s)	1721
EarI	CTCTTC	1 cut(s)	1721
Eco130I	CCWWGG	3 cut(s)	940, 1283, 1493
Eco24I	GRGCYC	1 cut(s)	1984
Eco31I	GGTCTC	1 cut(s)	1367
Eco47I	GGWCC	3 cut(s)	116, 863, 1803
Eco57I	CTGAAG	1 cut(s)	313
Eco91I	GGTNACC	1 cut(s)	1346
EcoO65I	GGTNACC	1 cut(s)	1346
EcoRII	CCWGG	3 cut(s)	578, 1351, 1782
EcoT14I	CCWWGG	3 cut(s)	940, 1283, 1493
EcoT22I	ATGCAT	1 cut(s)	880
EcoT38I	GRGCYC	1 cut(s)	1984
ErhI	CCWWGG	3 cut(s)	940, 1283, 1493
FalI	AAGNNNNNCTT	2 cut(s)	118, 150
FaqI	GGGAC	1 cut(s)	294
FbaI	TGATCA	1 cut(s)	1243
FblI	GTMKAC	1 cut(s)	69
Fnu4HI	GCNGC	4 cut(s)	291, 649, 844, 1938
FokI	GGATG	4 cut(s)	856, 1028, 1188, 1562
FriOI	GRGCYC	1 cut(s)	1984
Fsp4HI	GCNGC	4 cut(s)	291, 649, 844, 1938
FspBI	CTAG	6 cut(s)	56, 75, 177, 188, 750, 1494
GlaI	GCGC	2 cut(s)	674, 1822
GluI	GCNGC	4 cut(s)	291, 649, 844, 1938
HaeII	RGCGCY	1 cut(s)	676
HaeIII	GGCC	3 cut(s)	281, 1908, 1982
HapII	CCGG	2 cut(s)	1272, 1380
HgaI	GACGC	3 cut(s)	849, 1067, 1481
HhaI	GCGC	2 cut(s)	675, 1823
Hin1I	GRCGYC	2 cut(s)	841, 1473
Hin6I	GCGC	2 cut(s)	673, 1821
HinP1I	GCGC	2 cut(s)	673, 1821
HincII	GTYRAC	1 cut(s)	1465
HindII	GTYRAC	1 cut(s)	1465
HpaII	CCGG	2 cut(s)	1272, 1380
HphI	GGTGA	3 cut(s)	949, 1447, 1726
Hpy166II	GTNNAC	7 cut(s)	70, 412, 1036, 1199, 1277, 1465, 1555
Hpy188I	TCNGA	6 cut(s)	120, 148, 226, 1375, 1672, 1690
Hpy8I	GTNNAC	7 cut(s)	70, 412, 1036, 1199, 1277, 1465, 1555
Hpy99I	CGWCG	2 cut(s)	843, 1475
HpyAV	CCTTC	7 cut(s)	19, 323, 763, 919, 1486, 1807, 2008
HpyCH4III	ACNGT	6 cut(s)	395, 737, 1033, 1256, 1508, 1720
HpyF10VI	GCNNNNNNNGC	2 cut(s)	287, 672
HpyF3I	CTNAG	4 cut(s)	921, 1372, 1394, 1559
Hsp92I	GRCGYC	2 cut(s)	841, 1473
HspAI	GCGC	2 cut(s)	673, 1821
Kpn2I	TCCGGA	1 cut(s)	1379
KpnI	GGTACC	1 cut(s)	1635
Ksp22I	TGATCA	1 cut(s)	1243
Kzo9I	GATC	7 cut(s)	148, 337, 1061, 1243, 1333, 1480, 1591
LmnI	GCTCC	2 cut(s)	1530, 1735
Lsp1109I	GCAGC	3 cut(s)	277, 660, 1924
LweI	GCATC	3 cut(s)	887, 897, 1166
MabI	ACCWGGT	1 cut(s)	578
MaeI	CTAG	6 cut(s)	56, 75, 177, 188, 750, 1494
MaeIII	GTNAC	4 cut(s)	1187, 1346, 1714, 1960
MalI	GATC	7 cut(s)	150, 339, 1063, 1245, 1335, 1482, 1593
MbiI	CCGCTC	1 cut(s)	666
MboI	GATC	7 cut(s)	148, 337, 1061, 1243, 1333, 1480, 1591
MboII	GAAGA	8 cut(s)	28, 311, 522, 622, 946, 1241, 1738, 1930
MfeI	CAATTG	2 cut(s)	652, 1366
MhlI	GDGCHC	2 cut(s)	1279, 1984
MlsI	TGGCCA	1 cut(s)	281
MluNI	TGGCCA	1 cut(s)	281
MlyI	GAGTC	6 cut(s)	65, 512, 740, 989, 1385, 1406
MmeI	TCCRAC	2 cut(s)	233, 1659
Mox20I	TGGCCA	1 cut(s)	281
Mph1103I	ATGCAT	1 cut(s)	880
MroI	TCCGGA	1 cut(s)	1379
MroXI	GAANNNNTTC	2 cut(s)	8, 1221
MscI	TGGCCA	1 cut(s)	281
MseI	TTAA	4 cut(s)	1572, 1797, 1950, 1967
MslI	CAYNNNNRTG	4 cut(s)	18, 1194, 1282, 2016
Msp20I	TGGCCA	1 cut(s)	281
MspA1I	CMGCKG	1 cut(s)	759
MspI	CCGG	2 cut(s)	1272, 1380
MspR9I	CCNGG	4 cut(s)	580, 1272, 1353, 1784
MunI	CAATTG	2 cut(s)	652, 1366
MvaI	CCWGG	3 cut(s)	580, 1353, 1784
MwoI	GCNNNNNNNGC	2 cut(s)	287, 672
NciI	CCSGG	1 cut(s)	1272
NcoI	CCATGG	1 cut(s)	1283
NdeII	GATC	7 cut(s)	148, 337, 1061, 1243, 1333, 1480, 1591
NheI	GCTAGC	1 cut(s)	187
NlaIV	GGNNCC	2 cut(s)	1633, 1982
NmuCI	GTSAC	2 cut(s)	1187, 1714
NsiI	ATGCAT	1 cut(s)	880
NspI	RCATGY	3 cut(s)	108, 421, 441
OliI	CACNNNNGTG	1 cut(s)	1194
PagI	TCATGA	3 cut(s)	556, 724, 1116
PciI	ACATGT	2 cut(s)	104, 437
PcsI	WCGNNNNNNNCGW	3 cut(s)	1057, 1192, 1476
PdmI	GAANNNNTTC	2 cut(s)	8, 1221
PfeI	GAWTC	5 cut(s)	4, 158, 681, 1296, 1445
PkrI	GCNGC	4 cut(s)	292, 650, 845, 1939
Ple19I	CGATCG	1 cut(s)	340
PleI	GAGTC	6 cut(s)	65, 512, 740, 989, 1384, 1406
PpsI	GAGTC	6 cut(s)	65, 512, 740, 989, 1384, 1406
PscI	ACATGT	2 cut(s)	104, 437
Psp6I	CCWGG	3 cut(s)	578, 1351, 1782
PspEI	GGTNACC	1 cut(s)	1346
PspGI	CCWGG	3 cut(s)	578, 1351, 1782
PspN4I	GGNNCC	2 cut(s)	1633, 1982
PspOMI	GGGCCC	1 cut(s)	1980
PspPI	GGNCC	5 cut(s)	116, 863, 1803, 1980, 1981
PsrI	GAACNNNNNNTAC	2 cut(s)	1615, 1647
PstNI	CAGNNNCTG	1 cut(s)	1070
PvuI	CGATCG	1 cut(s)	340
PvuII	CAGCTG	1 cut(s)	759
RsaI	GTAC	4 cut(s)	497, 1037, 1633, 1856
RsaNI	GTAC	4 cut(s)	496, 1036, 1632, 1855
RseI	CAYNNNNRTG	4 cut(s)	18, 1194, 1282, 2016
SaqAI	TTAA	4 cut(s)	1572, 1797, 1950, 1967
SatI	GCNGC	4 cut(s)	291, 649, 844, 1938
Sau3AI	GATC	7 cut(s)	148, 337, 1061, 1243, 1333, 1480, 1591
Sau96I	GGNCC	5 cut(s)	116, 863, 1803, 1980, 1981
SchI	GAGTC	6 cut(s)	65, 512, 740, 989, 1385, 1406
ScrFI	CCNGG	4 cut(s)	580, 1272, 1353, 1784
SduI	GDGCHC	2 cut(s)	1279, 1984
SexAI	ACCWGGT	1 cut(s)	578
SfaNI	GCATC	3 cut(s)	887, 897, 1166
SfcI	CTRYAG	2 cut(s)	66, 804
SinI	GGWCC	3 cut(s)	116, 863, 1803
SmiMI	CAYNNNNRTG	4 cut(s)	18, 1194, 1282, 2016
SsiI	CCGC	3 cut(s)	666, 844, 1329
SspI	AATATT	1 cut(s)	1340
SspMI	CTAG	6 cut(s)	56, 75, 177, 188, 750, 1494
StyD4I	CCNGG	4 cut(s)	578, 1270, 1351, 1782
StyI	CCWWGG	3 cut(s)	940, 1283, 1493
TaaI	ACNGT	6 cut(s)	395, 737, 1033, 1256, 1508, 1720
TatI	WGTACW	2 cut(s)	495, 1035
TauI	GCSGC	1 cut(s)	846
TfiI	GAWTC	5 cut(s)	4, 158, 681, 1296, 1445
Tru1I	TTAA	4 cut(s)	1572, 1797, 1950, 1967
Tru9I	TTAA	4 cut(s)	1572, 1797, 1950, 1967
TscAI	CASTG	4 cut(s)	289, 718, 1038, 1284
TseFI	GTSAC	2 cut(s)	1187, 1714
TseI	GCWGC	3 cut(s)	290, 648, 1937
Tsp45I	GTSAC	2 cut(s)	1187, 1714
TspGWI	ACGGA	2 cut(s)	1245, 1670
TspRI	CASTG	4 cut(s)	289, 718, 1038, 1284
VneI	GTGCAC	1 cut(s)	1275
VpaK11BI	GGWCC	3 cut(s)	116, 863, 1803
XapI	RAATTY	1 cut(s)	695
XceI	RCATGY	3 cut(s)	108, 421, 441
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1615
XmaJI	CCTAGG	1 cut(s)	1493
XmiI	GTMKAC	1 cut(s)	69
XmnI	GAANNNNTTC	2 cut(s)	8, 1221
XspI	CTAG	6 cut(s)	56, 75, 177, 188, 750, 1494
Zsp2I	ATGCAT	1 cut(s)	880

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.