Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0000786

Physical Location & Seq

Genomic Coordinates Forward (+)

61580819 .. 61585441

Gene Structure 4623 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00268510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGCCAGACAATGCAACGGAAGAAGTGGAAAAAGTTTTGAAGCGAGGGTTTCAGGTTGAGTACAGCGCGGATTGGGGTCTCTGTAGGTCATGCATGAACTCTAATGGCACCTGTGGATCGAACGCAACGACGGATTCGTTTCTCTGCCTTTGCGGGGATCGTCCTAACAATTCTACTTGTCCAATTGTTCATGACTCTAGCTACTACGAGGCTTGCAAGCCTCAAACATGTGGGAATGGTCCGAATATAAGCTACCCTTTTTGGCTTTCGGATCAACAAGAATCCTATTGTGGCTATCCTAATTTCAAGCTAGCATGCAAGGACAAAAATCCAACACTTACTATTTCTGATGATGATTATATCATCAAAGAAATCTTTTACTCAAACCATTCGTTTCTCGTGGCCAATGGTGCTGTGTATGAAGATGAATGCCCCCTTCCTCTACATAGCTTCAGCCTCGATCGAACACCTTTCAATTATAGTTCCAATCATGTTGATTTTTCCTTGTTCTACAACTGTTCCCAAGAACCTGTGAACAACATGCTTGCATATTCTATTACATGTGCAAGCAATTCCACACTTCATTCTTTTGCTACCATTCACAAAGAGGTATTGCAGTACATGAACCAAACATTATTAGACTCATGCAAGTCTTCGGTTGTTTTACCTTTGGATTATCATGAGGCTGGTGGTGTGAATACCTTGTTGAAAATGAATTATACTGAAATCTTGAAGATGGGGTTCGTTTTGAATTGGACTGCACAAAATTGCAGCAATTGTGAGATGAGCGGTGGGCGCTGTGGATTCGATAACAATGAATTTGTCTGTTTTTGCAGTGATAGACCTCATGAAAACACCTGTGATGATGTTGCAAATTTGCTACTTCTTAAAGTGAGCTCGCCGTTCTCTTCAGGTCTTTGCTCGGTTATTGGAACTATAGCTGTAATGGGCTTCATTTTCTTCATATGGCGACGCCGCAACAGAAATCGATATGGTCCATCATCCTATGCATCTCGAAGCATCTATTCTAAAAGCTATTCCAGAAGTGATACTGAGAAGGGAAGTGCATACCTTGGAGTTCATGTCTTCACCTACAAGGAACTTGAACAAGCAACAAGCTATTTCGACTCATCAAAAGAAATTGGTGATGGAGGCTTTGGCACAGTGTACTATGGAAAAGTTCGTGATGGGCGATCAGTTGCTGTCAAGCGTCTTTACGAAACCAATTACAAGAGAGTTGAGCAGTTCATGAATGAAATCGAGATTTTAGCTCGCCTACGCCACCAAAACCTTGTCTTACTCTATGGATGCACCTCTCGTCACAGCCGTGAACTCCTCCTTGTCTATGAATATGTTCCCAATGGAACTCTTGCTGATCATCTTCACGGTGGAAAAGGAAAACCCGGTGCACTGCCATGGCATACTCGAATCAACATTGCCGTAGAAACTGCAAGTGCATTGTCCTATCTTCATGCGTCTGAGATCATCCACCGCGATGTGAAAACCACTAACATTCTCCTTGACAACAATTTCTGTGTCAAAGTAGCAGATTTTGGACTGTCTCGTCTCTTCCCCACGGATGTCACCCATATCTCAACTGCTCCACAAGGAACTCCGGGTTATGTTGATCCCGATTATAACCAATGCTACCAGCTTACTGCGAAGAGTGATGTCTATAGCTTCGGTGTGGTCCTGGTTGAACTCATATCATCCTTGCCTGCTGTTGATATCACAAGGCATCGACATGAGATCAATTTGTCAAACATGGCTATCAACAAAATTCAGAAACATGCATTGCATGAGCTAGTGGATCCATCCCTTGGGTATGAATCAGACTTTAAAGTAAGAAAAATGATCAATGCAGTGGCGGAATTAGCGTTTCGGTGCCTGCAAAATGAGACTGAAATGAGACCTTCTATGGTTGATGTGGAAAATGAACTAAAGAGGATACAGAGTGATGATTTTAGTAAAGAAAAGGCAGAGGAAATTGATATTTCACCTTCACCAGATTCTGTGACAATAAATTGGGTTAGCAAGTCTTCAACACCAAATGATAGCACTGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010228 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023052 GO:0031668 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0036211 GO:0042221 GO:0042631 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0104004 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

688

Amino Acids

77.23

Weight (kDa)

5.63

Isoelectric Point (pI)

44.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WAK_assoc	PF14380	6 - 53	1.3e-11	Wall-associated receptor kinase C-terminal
GUB_WAK_bind	PF13947	72 - 135	3.1e-18	Wall-associated receptor kinase galacturonan-binding
WAK_assoc	PF14380	188 - 281	4.2e-16	Wall-associated receptor kinase C-terminal
Pkinase	PF00069	376 - 643	2.5e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	378 - 647	1.8e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18390 AT1G18390
fragaria_vesca	FvH4_5g11760 FvH4_5g11760 FvH4_5g11790
malus_domestica	MD06G1218900.v1.1 MD06G1219200.v1.1 MD14G1228700.v1.1
prunus_persica	Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1
pyrus_communis	pycom06g19560 pycom06g19580 pycom14g19000
rosa_chinensis	RchiOBHm_Chr7g0185891 RchiOBHm_Chr7g0185941 RchiOBHm_Chr7g0185971 RchiOBHm_Chr7g0186001 RchiOBHm_Chr7g0186021 RchiOBHm_Chr7g0209991 RchiOBHm_Chr7g0210001
rosa_laevigata	RLG00000003071 RLG00000004872 RLG00000004873 RLG00000004875 RLG00000005413
rosa_multiflora	Rmu_co8007212.1_g000001 Rmu_co8076798.1_g000001 Rmu_sc0000194.1_g000013 Rmu_sc0000194.1_g000017 Rmu_sc0000194.1_g000019 Rmu_sc0004509.1_g000017 Rmu_sc0004509.1_g000018 Rmu_sc0005665.1_g000002 Rmu_sc0005665.1_g000004 Rmu_sc0005665.1_g000020 Rmu_sc0005665.1_g000023 Rmu_sc0005665.1_g000035
rosa_roxburghii	Rroxscaffold_1G00039510 Rroxscaffold_3G00248670 Rroxscaffold_3G00257880 Rroxscaffold_3G00268500 Rroxscaffold_3G00268510 Rroxscaffold_3G00268530 Rroxscaffold_3G00268580
rosa_rugosa	Rorug06G0471800 Rorug07G0117900
rosa_samantha	Rh1BG104700 Rh4CG290300 Rh7AG070300 Rh7AG070400 Rh7AG070600 Rh7AG251700 Rh7BG086300 Rh7BG086400 Rh7BG246300 Rh7CG077400 Rh7CG077800 Rh7CG078000 Rh7CG268500 Rh7DG077400 Rh7DG077600 Rh7DG077900 Rh7DG078000 Rh7DG258500
rosa_wichuraiana	Rw7G006440 Rw7G006470 Rw7G006480 Rw7G021370

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1638
AasI	GACNNNNNNGTC	1 cut(s)	1563
AccB1I	GGYRCC	2 cut(s)	107, 1884
AccB7I	CCANNNNNTGG	1 cut(s)	1820
AccBSI	CCGCTC	1 cut(s)	789
AccII	CGCG	2 cut(s)	68, 1494
AciI	CCGC	6 cut(s)	68, 153, 789, 976, 1492, 1868
AclWI	GGATC	6 cut(s)	124, 165, 279, 1622, 1805, 1818
AcoI	YGGCCR	1 cut(s)	402
AcsI	RAATTY	3 cut(s)	818, 874, 1779
AcuI	CTGAAG	2 cut(s)	436, 894
AcyI	GRCGYC	1 cut(s)	973
AfaI	GTAC	3 cut(s)	62, 620, 1169
AfiI	CCNNNNNNNGG	2 cut(s)	154, 1820
AflIII	ACRYGT	2 cut(s)	227, 560
AgsI	TTSAA	9 cut(s)	40, 307, 475, 709, 733, 751, 1106, 1700, 2043
AjnI	CCWGG	1 cut(s)	1692
AleI	CACNNNNGTG	1 cut(s)	1326
Alw21I	GWGCWC	2 cut(s)	899, 1411
Alw26I	GTCTC	5 cut(s)	83, 1566, 1571, 1892, 1903
Alw44I	GTGCAC	1 cut(s)	1407
AlwI	GGATC	6 cut(s)	124, 165, 279, 1622, 1805, 1818
AlwNI	CAGNNNCTG	2 cut(s)	1202, 2012
AoxI	GGCC	1 cut(s)	402
ApaLI	GTGCAC	1 cut(s)	1407
ApeKI	GCWGC	1 cut(s)	771
ApoI	RAATTY	3 cut(s)	818, 874, 1779
Asp700I	GAANNNNTTC	1 cut(s)	1353
AspLEI	GCGC	2 cut(s)	68, 798
AspS9I	GGNCC	3 cut(s)	239, 995, 1690
AsuC2I	CCSGG	2 cut(s)	1404, 1617
AsuHPI	GGTGA	5 cut(s)	1081, 1157, 1576, 1989, 1995
AsuNHI	GCTAGC	1 cut(s)	310
AvaII	GGWCC	3 cut(s)	239, 995, 1690
BaeGI	GKGCMC	1 cut(s)	1411
BalI	TGGCCA	1 cut(s)	404
BamHI	GGATCC	1 cut(s)	1810
BanI	GGYRCC	2 cut(s)	107, 1884
BanII	GRGCYC	1 cut(s)	899
BauI	CACGAG	1 cut(s)	398
BbsI	GAAGAC	3 cut(s)	645, 1078, 2031
Bbv12I	GWGCWC	2 cut(s)	899, 1411
BbvI	GCAGC	1 cut(s)	783
BccI	CCATC	5 cut(s)	730, 1006, 1142, 1181, 1822
BceAI	ACGGC	3 cut(s)	886, 1311, 1424
BciT130I	CCWGG	1 cut(s)	1694
BciVI	GTATCC	1 cut(s)	1941
BclI	TGATCA	2 cut(s)	1375, 1854
BcnI	CCSGG	2 cut(s)	1404, 1617
BcoDI	GTCTC	5 cut(s)	83, 1566, 1571, 1892, 1903
BfaI	CTAG	3 cut(s)	198, 311, 1805
BfmI	CTRYAG	3 cut(s)	82, 936, 1675
BfoI	RGCGCY	1 cut(s)	799
BfuI	GTATCC	1 cut(s)	1941
BisI	GCNGC	2 cut(s)	772, 976
BlsI	GCNGC	2 cut(s)	773, 977
Bme1390I	CCNGG	3 cut(s)	1404, 1617, 1694
Bme18I	GGWCC	3 cut(s)	239, 995, 1690
BmgT120I	GGNCC	3 cut(s)	239, 995, 1690
BmiI	GGNNCC	3 cut(s)	109, 1812, 1886
BmrFI	CCNGG	3 cut(s)	1404, 1617, 1694
BmsI	GCATC	4 cut(s)	1019, 1029, 1298, 1747
BmtI	GCTAGC	1 cut(s)	314
BpiI	GAAGAC	3 cut(s)	645, 1078, 2031
BpuMI	CCSGG	2 cut(s)	1404, 1617
Bsa29I	ATCGAT	1 cut(s)	988
BsaHI	GRCGYC	1 cut(s)	973
BsaI	GGTCTC	2 cut(s)	83, 1903
BsaJI	CCNNGG	4 cut(s)	1072, 1415, 1575, 1819
BsaXI	ACNNNNNCTCC	2 cut(s)	1068, 1098
Bsc4I	CCNNNNNNNGG	2 cut(s)	154, 1820
Bse1I	ACTGG	1 cut(s)	2065
Bse3DI	GCAATG	2 cut(s)	1434, 1793
BseBI	CCWGG	1 cut(s)	1694
BseCI	ATCGAT	1 cut(s)	988
BseDI	CCNNGG	4 cut(s)	1072, 1415, 1575, 1819
BseGI	GGATG	6 cut(s)	1001, 1313, 1485, 1585, 1709, 1814
BseLI	CCNNNNNNNGG	2 cut(s)	154, 1820
BseMI	GCAATG	2 cut(s)	1434, 1793
BseMII	CTCAG	2 cut(s)	1044, 1470
BseNI	ACTGG	1 cut(s)	2065
BseRI	GAGGAG	1 cut(s)	1325
BseSI	GKGCMC	1 cut(s)	1411
BseXI	GCAGC	1 cut(s)	783
BsgI	GTGCAG	1 cut(s)	744
Bsh1236I	CGCG	2 cut(s)	68, 1494
Bsh1285I	CGRYCG	1 cut(s)	463
BshFI	GGCC	1 cut(s)	404
BshNI	GGYRCC	2 cut(s)	107, 1884
BshVI	ATCGAT	1 cut(s)	988
BsiEI	CGRYCG	1 cut(s)	463
BsiHKAI	GWGCWC	2 cut(s)	899, 1411
BsiSI	CCGG	2 cut(s)	1404, 1616
BslI	CCNNNNNNNGG	2 cut(s)	154, 1820
BsmAI	GTCTC	5 cut(s)	83, 1566, 1571, 1892, 1903
BsmBI	CGTCTC	1 cut(s)	1571
BsmI	GAATGC	1 cut(s)	434
BsnI	GGCC	1 cut(s)	404
Bso31I	GGTCTC	2 cut(s)	83, 1903
Bsp1286I	GDGCHC	2 cut(s)	899, 1411
Bsp19I	CCATGG	1 cut(s)	1415
BspACI	CCGC	6 cut(s)	68, 153, 789, 976, 1492, 1868
BspANI	GGCC	1 cut(s)	404
BspCNI	CTCAG	2 cut(s)	1045, 1471
BspDI	ATCGAT	1 cut(s)	988
BspFNI	CGCG	2 cut(s)	68, 1494
BspHI	TCATGA	4 cut(s)	190, 679, 847, 1248
BspLI	GGNNCC	3 cut(s)	109, 1812, 1886
BspOI	GCTAGC	1 cut(s)	314
BspPI	GGATC	6 cut(s)	124, 165, 279, 1622, 1805, 1818
BspT107I	GGYRCC	2 cut(s)	107, 1884
BspTNI	GGTCTC	2 cut(s)	83, 1903
BsrBI	CCGCTC	1 cut(s)	789
BsrDI	GCAATG	2 cut(s)	1434, 1793
BsrI	ACTGG	1 cut(s)	2065
BssECI	CCNNGG	4 cut(s)	1072, 1415, 1575, 1819
BssNI	GRCGYC	1 cut(s)	973
BssSI	CACGAG	1 cut(s)	398
BssT1I	CCWWGG	3 cut(s)	1072, 1415, 1819
Bst2BI	CACGAG	1 cut(s)	398
Bst2UI	CCWGG	1 cut(s)	1694
Bst4CI	ACNGT	4 cut(s)	518, 1165, 1388, 1560
Bst6I	CTCTTC	3 cut(s)	913, 1574, 1658
BstACI	GRCGYC	1 cut(s)	973
BstDEI	CTNAG	2 cut(s)	1053, 1479
BstDSI	CCRYGG	2 cut(s)	1415, 1575
BstF5I	GGATG	6 cut(s)	1001, 1313, 1485, 1585, 1709, 1814
BstFNI	CGCG	2 cut(s)	68, 1494
BstH2I	RGCGCY	1 cut(s)	799
BstHHI	GCGC	2 cut(s)	68, 798
BstMAI	GTCTC	5 cut(s)	83, 1566, 1571, 1892, 1903
BstMCI	CGRYCG	1 cut(s)	463
BstMWI	GCNNNNNNNGC	3 cut(s)	410, 795, 1874
BstNI	CCWGG	1 cut(s)	1694
BstNSI	RCATGY	5 cut(s)	231, 318, 544, 564, 1793
BstSCI	CCNGG	3 cut(s)	1402, 1615, 1692
BstSFI	CTRYAG	3 cut(s)	82, 936, 1675
BstSLI	GKGCMC	1 cut(s)	1411
BstUI	CGCG	2 cut(s)	68, 1494
BstV1I	GCAGC	1 cut(s)	783
BstV2I	GAAGAC	3 cut(s)	645, 1078, 2031
BstX2I	RGATCY	1 cut(s)	1810
BstYI	RGATCY	1 cut(s)	1810
Bsu15I	ATCGAT	1 cut(s)	988
BsuI	GTATCC	1 cut(s)	1941
BsuRI	GGCC	1 cut(s)	404
BsuTUI	ATCGAT	1 cut(s)	988
BtgI	CCRYGG	2 cut(s)	1415, 1575
BtgZI	GCGATG	1 cut(s)	1509
BtsCI	GGATG	6 cut(s)	1001, 1313, 1485, 1585, 1709, 1814
BtsI	GCAGTG	3 cut(s)	841, 1409, 1869
BtsIMutI	CAGTG	5 cut(s)	841, 1170, 1409, 1869, 2058
CaiI	CAGNNNCTG	2 cut(s)	1202, 2012
CciI	TCATGA	4 cut(s)	190, 679, 847, 1248
CfoI	GCGC	2 cut(s)	68, 798
Cfr13I	GGNCC	3 cut(s)	239, 995, 1690
ClaI	ATCGAT	1 cut(s)	988
CseI	GACGC	3 cut(s)	981, 1199, 1464
Csp6I	GTAC	3 cut(s)	61, 619, 1168
CviQI	GTAC	3 cut(s)	61, 619, 1168
DdeI	CTNAG	2 cut(s)	1053, 1479
DraI	TTTAAA	1 cut(s)	1840
DrdI	GACNNNNNNGTC	1 cut(s)	1563
DseDI	GACNNNNNNGTC	1 cut(s)	1563
EaeI	YGGCCR	1 cut(s)	402
Eam1104I	CTCTTC	3 cut(s)	913, 1574, 1658
EarI	CTCTTC	3 cut(s)	913, 1574, 1658
EciI	GGCGGA	1 cut(s)	1883
Ecl136II	GAGCTC	1 cut(s)	897
Eco130I	CCWWGG	3 cut(s)	1072, 1415, 1819
Eco24I	GRGCYC	1 cut(s)	899
Eco31I	GGTCTC	2 cut(s)	83, 1903
Eco32I	GATATC	1 cut(s)	1729
Eco47I	GGWCC	3 cut(s)	239, 995, 1690
Eco53kI	GAGCTC	1 cut(s)	897
Eco57I	CTGAAG	2 cut(s)	436, 894
EcoICRI	GAGCTC	1 cut(s)	897
EcoRII	CCWGG	1 cut(s)	1692
EcoRV	GATATC	1 cut(s)	1729
EcoT14I	CCWWGG	3 cut(s)	1072, 1415, 1819
EcoT22I	ATGCAT	3 cut(s)	95, 1012, 1795
EcoT38I	GRGCYC	1 cut(s)	899
ErhI	CCWWGG	3 cut(s)	1072, 1415, 1819
Esp3I	CGTCTC	1 cut(s)	1571
FalI	AAGNNNNNCTT	2 cut(s)	241, 273
FauI	CCCGC	1 cut(s)	146
FauNDI	CATATG	1 cut(s)	965
FbaI	TGATCA	2 cut(s)	1375, 1854
Fnu4HI	GCNGC	2 cut(s)	772, 976
FokI	GGATG	6 cut(s)	988, 1320, 1472, 1592, 1696, 1801
FriOI	GRGCYC	1 cut(s)	899
Fsp4HI	GCNGC	2 cut(s)	772, 976
FspBI	CTAG	3 cut(s)	198, 311, 1805
GlaI	GCGC	2 cut(s)	67, 797
GluI	GCNGC	2 cut(s)	772, 976
HaeII	RGCGCY	1 cut(s)	799
HaeIII	GGCC	1 cut(s)	404
HapII	CCGG	2 cut(s)	1404, 1616
HgaI	GACGC	3 cut(s)	981, 1199, 1464
HhaI	GCGC	2 cut(s)	68, 798
Hin1I	GRCGYC	1 cut(s)	973
Hin6I	GCGC	2 cut(s)	66, 796
HinP1I	GCGC	2 cut(s)	66, 796
HinfI	GANTC	9 cut(s)	134, 194, 281, 641, 804, 1127, 1428, 1829, 2009
HpaII	CCGG	2 cut(s)	1404, 1616
HphI	GGTGA	5 cut(s)	1081, 1157, 1576, 1989, 1995
Hpy166II	GTNNAC	4 cut(s)	535, 1168, 1331, 1409
Hpy188I	TCNGA	6 cut(s)	243, 271, 349, 1480, 1785, 1834
Hpy8I	GTNNAC	4 cut(s)	535, 1168, 1331, 1409
Hpy99I	CGWCG	2 cut(s)	133, 975
HpyAV	CCTTC	4 cut(s)	446, 1051, 1923, 2010
HpyCH4III	ACNGT	4 cut(s)	518, 1165, 1388, 1560
HpyF10VI	GCNNNNNNNGC	3 cut(s)	410, 795, 1874
HpyF3I	CTNAG	2 cut(s)	1053, 1479
Hsp92I	GRCGYC	1 cut(s)	973
HspAI	GCGC	2 cut(s)	66, 796
Ksp22I	TGATCA	2 cut(s)	1375, 1854
LmnI	GCTCC	1 cut(s)	1606
Lsp1109I	GCAGC	1 cut(s)	783
LweI	GCATC	4 cut(s)	1019, 1029, 1298, 1747
MaeI	CTAG	3 cut(s)	198, 311, 1805
MaeIII	GTNAC	3 cut(s)	1319, 1582, 2014
MbiI	CCGCTC	1 cut(s)	789
MfeI	CAATTG	2 cut(s)	183, 775
MflI	RGATCY	1 cut(s)	1810
MhlI	GDGCHC	2 cut(s)	899, 1411
MlsI	TGGCCA	1 cut(s)	404
MluNI	TGGCCA	1 cut(s)	404
MlyI	GAGTC	3 cut(s)	188, 635, 1121
MmeI	TCCRAC	1 cut(s)	356
Mox20I	TGGCCA	1 cut(s)	404
Mph1103I	ATGCAT	3 cut(s)	95, 1012, 1795
MroXI	GAANNNNTTC	1 cut(s)	1353
MscI	TGGCCA	1 cut(s)	404
MseI	TTAA	3 cut(s)	888, 1839, 2065
MslI	CAYNNNNRTG	4 cut(s)	1326, 1414, 1494, 1743
Msp20I	TGGCCA	1 cut(s)	404
MspI	CCGG	2 cut(s)	1404, 1616
MspR9I	CCNGG	3 cut(s)	1404, 1617, 1694
MunI	CAATTG	2 cut(s)	183, 775
Mva1269I	GAATGC	1 cut(s)	434
MvaI	CCWGG	1 cut(s)	1694
MvnI	CGCG	2 cut(s)	68, 1494
MwoI	GCNNNNNNNGC	3 cut(s)	410, 795, 1874
NciI	CCSGG	2 cut(s)	1404, 1617
NcoI	CCATGG	1 cut(s)	1415
NdeI	CATATG	1 cut(s)	965
NheI	GCTAGC	1 cut(s)	310
NlaIV	GGNNCC	3 cut(s)	109, 1812, 1886
NmuCI	GTSAC	3 cut(s)	1319, 1582, 2014
NsiI	ATGCAT	3 cut(s)	95, 1012, 1795
NspI	RCATGY	5 cut(s)	231, 318, 544, 564, 1793
OliI	CACNNNNGTG	1 cut(s)	1326
PaeI	GCATGC	1 cut(s)	318
PagI	TCATGA	4 cut(s)	190, 679, 847, 1248
PciI	ACATGT	2 cut(s)	227, 560
PcsI	WCGNNNNNNNCGW	4 cut(s)	125, 134, 1189, 1324
PctI	GAATGC	1 cut(s)	434
PdmI	GAANNNNTTC	1 cut(s)	1353
PfeI	GAWTC	6 cut(s)	134, 281, 804, 1428, 1829, 2009
PflMI	CCANNNNNTGG	1 cut(s)	1820
PkrI	GCNGC	2 cut(s)	773, 977
Ple19I	CGATCG	1 cut(s)	463
PleI	GAGTC	3 cut(s)	188, 635, 1121
PpsI	GAGTC	3 cut(s)	188, 635, 1121
PscI	ACATGT	2 cut(s)	227, 560
PsiI	TTATAA	1 cut(s)	1638
Psp124BI	GAGCTC	1 cut(s)	899
Psp6I	CCWGG	1 cut(s)	1692
PspGI	CCWGG	1 cut(s)	1692
PspN4I	GGNNCC	3 cut(s)	109, 1812, 1886
PspPI	GGNCC	3 cut(s)	239, 995, 1690
PstNI	CAGNNNCTG	2 cut(s)	1202, 2012
PsuI	RGATCY	1 cut(s)	1810
PvuI	CGATCG	1 cut(s)	463
RsaI	GTAC	3 cut(s)	62, 620, 1169
RsaNI	GTAC	3 cut(s)	61, 619, 1168
RseI	CAYNNNNRTG	4 cut(s)	1326, 1414, 1494, 1743
SacI	GAGCTC	1 cut(s)	899
SaqAI	TTAA	3 cut(s)	888, 1839, 2065
SatI	GCNGC	2 cut(s)	772, 976
Sau96I	GGNCC	3 cut(s)	239, 995, 1690
SchI	GAGTC	3 cut(s)	188, 635, 1121
ScrFI	CCNGG	3 cut(s)	1404, 1617, 1694
SduI	GDGCHC	2 cut(s)	899, 1411
SfaNI	GCATC	4 cut(s)	1019, 1029, 1298, 1747
SfcI	CTRYAG	3 cut(s)	82, 936, 1675
SinI	GGWCC	3 cut(s)	239, 995, 1690
SmiMI	CAYNNNNRTG	4 cut(s)	1326, 1414, 1494, 1743
SphI	GCATGC	1 cut(s)	318
SsiI	CCGC	6 cut(s)	68, 153, 789, 976, 1492, 1868
SspMI	CTAG	3 cut(s)	198, 311, 1805
SstI	GAGCTC	1 cut(s)	899
StyD4I	CCNGG	3 cut(s)	1402, 1615, 1692
StyI	CCWWGG	3 cut(s)	1072, 1415, 1819
TaaI	ACNGT	4 cut(s)	518, 1165, 1388, 1560
TatI	WGTACW	3 cut(s)	60, 618, 1167
TauI	GCSGC	1 cut(s)	978
TfiI	GAWTC	6 cut(s)	134, 281, 804, 1428, 1829, 2009
Tru1I	TTAA	3 cut(s)	888, 1839, 2065
Tru9I	TTAA	3 cut(s)	888, 1839, 2065
TscAI	CASTG	5 cut(s)	841, 1170, 1416, 1869, 2065
TseFI	GTSAC	3 cut(s)	1319, 1582, 2014
TseI	GCWGC	1 cut(s)	771
Tsp45I	GTSAC	3 cut(s)	1319, 1582, 2014
TspGWI	ACGGA	3 cut(s)	32, 146, 1592
TspRI	CASTG	5 cut(s)	841, 1170, 1416, 1869, 2065
Van91I	CCANNNNNTGG	1 cut(s)	1820
VneI	GTGCAC	1 cut(s)	1407
VpaK11BI	GGWCC	3 cut(s)	239, 995, 1690
XapI	RAATTY	3 cut(s)	818, 874, 1779
XceI	RCATGY	5 cut(s)	231, 318, 544, 564, 1793
XmnI	GAANNNNTTC	1 cut(s)	1353
XspI	CTAG	3 cut(s)	198, 311, 1805
Zsp2I	ATGCAT	3 cut(s)	95, 1012, 1795

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.