Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0000786

Physical Location & Seq

Genomic Coordinates Reverse (-)

35158479 .. 35161283

Gene Structure 2805 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1218900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGAATCTCCTCCGTATTATTGTTGTCACCATCATATTCACAACCTTCGCCAACCGAGCTTTCTCCGTAGACCGAAGATTCGAGGCCTGCGAGCCTCAAACGTGTGGAAATGGCCCGAACATAGGCTACCCTTTTTGGCTTTCTGGCAAGCAAGAGTCCTGCGGTTACCCGAGCTTCAAGATCACCTGCAATGAAAAATATCCGGTATTTAGTATTTCCGACGATGATTACATCATTAGAGAAATCTTTTACTCAAACCATTCGTTTGTTCTGGCTAACGCCGCAGTCTATGATGACAAATGTCCACTTCCTCAACACAACTTCAGCCTCGATCGAACGCCTTTCAACTATAGTTCAGATCACGTCAATTTTTCCTTCTTTTATGATTGCCCTGAAGACGATTCGGAATACATGCTTTCATATCCCATTGACTGTGCTAGCAATGGCAGCCATCACTCTTTTGCTACTTTTCACAAGGAGCTAGTTGAGCGCATGAATTCGTTAGACTCGTGCCGGTCTTCAGTTCATTTGCCTTTCGATGGTGCTGCTAATGTCGATGCATTGATGCAAATGAACTACACCGAAATCTTGAAAATGGGGTTCATTTTGAACTGGACTGCGCAGAATTGCAGCAATTGCGAGAGGAGTGGCGGGCGCTGTGGATTCGATGACAATGAATTCGTTTGTTTTTGCAGTGATCGACCTCATGTCAAAACCTGTGATGATGACAATAATTCTTTGAACTGGAAGAGGAAGGTTATTGTAGGTGTTTGCACAGCTGTTGCTACCGTCGCTATAATGTGTGTTATTTTCTTTGTATACCAACGTCGAAACAGAAAACTAAACGATCCATCGTCCCTTGTAACTCGAAGCATCCTTTCGAGTACCTATTCTATGGACGACGATATGGAGAAGGGAAGTACCTACCATGGAGTACATATTTTCAGCTACAAGGAACTTGAAGAAGCAACTAATTATTTCGATTCTGCGAAAGTACTTGGCGATGGAGGCTTTGGCACAGTTTATCATGGAAATGTGCGGGATGGGAGAGCGGTTGCGGTCAAGCGTCTATATGAAAACAATTTCAAGAGAGTTGAGCAGTTCATGAATGAAATCGAGATTTTAGCCCGCCTGCGCCACCAAAATCTTGTGTTGCTCTATGGTTGCACCTCTCGTCACTGCCGAGAACTCCTCCTTGTGTACGAGTACATTCCTAATGGAACTCTTGCTGAACATCTTCACGGAGAAAAAGCAAAACCTGGCTCGCTTCCATGGCTTACTCGAATAAAGATTGCCATCGAAACCGCGAAGGCACTGTCATATCTTCATGCATCTGACATTATCCACCGTGACGTGAAAACTACGAATATTCTCCTTGACAACTTCTTCTGTGTCAAGGTAGCAGATTTTGGACTATCTCGCCTCTTCCCCATGAACGTCACGCACATCTCAACTGCTCCACAAGGGACTCCAGGTTATGTTGATCCCGAGTATAACGAATGCTACCAGCTTACGAGTAAGAGTGATGTCTATAGCTTTGGTGTGGTGCTGATTGAGCTCATATCATCCATGCCAGCCGTTGACATCACGAGGCATCGACACGAGATCAATTTGTCTACCATGGCAATCAACAAGATTCAAAAACAAACATTACATGAGCTAGTAGACCCATACTTAGGGTTTGAATCAGACTCCAGAACACGAAAAATGATCATTGCTGTGGCCGAACTAGCATTTCGCTGTCTGAATAGTGACAAGGACTTGAGACCTTCCATGATTGAGGTGCTTAACGAACTAAAGCGTATACAGAGCGATGATTTTGACATACAAAAAGCAGAGGAGATTGATATTTCAGCAATCGATATTGTGCCGTTAAAGAGTGATCCGCTGCCTGCTTCACCAGATTCCGTGGCATTCAAATGGACTAGCGTGTCTACGACACCAAATGCCAGCGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010228 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023052 GO:0031668 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0036211 GO:0042221 GO:0042631 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0104004 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

653

Amino Acids

73.89

Weight (kDa)

5.62

Isoelectric Point (pI)

43.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	30 - 92	1.9e-16	Wall-associated receptor kinase galacturonan-binding
WAK_assoc	PF14380	150 - 234	7.6e-16	Wall-associated receptor kinase C-terminal
Pkinase	PF00069	329 - 597	5.2e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	330 - 599	4.8e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18390 AT1G18390
fragaria_vesca	FvH4_5g11760 FvH4_5g11760 FvH4_5g11790
malus_domestica	MD06G1218900.v1.1 MD06G1219200.v1.1 MD14G1228700.v1.1
prunus_persica	Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1
pyrus_communis	pycom06g19560 pycom06g19580 pycom14g19000
rosa_chinensis	RchiOBHm_Chr7g0185891 RchiOBHm_Chr7g0185941 RchiOBHm_Chr7g0185971 RchiOBHm_Chr7g0186001 RchiOBHm_Chr7g0186021 RchiOBHm_Chr7g0209991 RchiOBHm_Chr7g0210001
rosa_laevigata	RLG00000003071 RLG00000004872 RLG00000004873 RLG00000004875 RLG00000005413
rosa_multiflora	Rmu_co8007212.1_g000001 Rmu_co8076798.1_g000001 Rmu_sc0000194.1_g000013 Rmu_sc0000194.1_g000017 Rmu_sc0000194.1_g000019 Rmu_sc0004509.1_g000017 Rmu_sc0004509.1_g000018 Rmu_sc0005665.1_g000002 Rmu_sc0005665.1_g000004 Rmu_sc0005665.1_g000020 Rmu_sc0005665.1_g000023 Rmu_sc0005665.1_g000035
rosa_roxburghii	Rroxscaffold_1G00039510 Rroxscaffold_3G00248670 Rroxscaffold_3G00257880 Rroxscaffold_3G00268500 Rroxscaffold_3G00268510 Rroxscaffold_3G00268530 Rroxscaffold_3G00268580
rosa_rugosa	Rorug06G0471800 Rorug07G0117900
rosa_samantha	Rh1BG104700 Rh4CG290300 Rh7AG070300 Rh7AG070400 Rh7AG070600 Rh7AG251700 Rh7BG086300 Rh7BG086400 Rh7BG246300 Rh7CG077400 Rh7CG077800 Rh7CG078000 Rh7CG268500 Rh7DG077400 Rh7DG077600 Rh7DG077900 Rh7DG078000 Rh7DG258500
rosa_wichuraiana	Rw7G006440 Rw7G006470 Rw7G006480 Rw7G021370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	194
AasI	GACNNNNNNGTC	1 cut(s)	1930
Acc16I	TGCGCA	1 cut(s)	621
Acc36I	ACCTGC	1 cut(s)	194
AccBSI	CCGCTC	1 cut(s)	1052
AccI	GTMKAC	6 cut(s)	69, 819, 1616, 1665, 1804, 1934
AccII	CGCG	1 cut(s)	1307
AclWI	GGATC	3 cut(s)	842, 1478, 1877
AcoI	YGGCCR	1 cut(s)	1722
AcsI	RAATTY	2 cut(s)	496, 677
AcuI	CTGAAG	3 cut(s)	307, 414, 504
AfaI	GTAC	6 cut(s)	886, 922, 936, 996, 1202, 1208
AfiI	CCNNNNNNNGG	3 cut(s)	122, 539, 1676
AflIII	ACRYGT	1 cut(s)	101
AhdI	GACNNNNNGTC	1 cut(s)	707
AjiI	CACGTC	2 cut(s)	364, 1354
AjnI	CCWGG	2 cut(s)	1258, 1471
AjuI	GAANNNNNNNTTGG	2 cut(s)	44, 76
AluBI	AGCT	9 cut(s)	59, 174, 481, 779, 948, 1510, 1536, 1558, 1660
AluI	AGCT	9 cut(s)	59, 174, 481, 779, 948, 1510, 1536, 1558, 1660
Alw21I	GWGCWC	1 cut(s)	1560
Alw26I	GTCTC	1 cut(s)	1759
AlwI	GGATC	3 cut(s)	842, 1478, 1877
Ama87I	CYCGRG	2 cut(s)	169, 1487
AoxI	GGCC	3 cut(s)	84, 112, 1722
ApeKI	GCWGC	4 cut(s)	447, 545, 630, 1888
ApoI	RAATTY	2 cut(s)	496, 677
ArsI	GACNNNNNNTTYG	6 cut(s)	62, 94, 662, 694, 1301, 1333
Asp700I	GAANNNNTTC	1 cut(s)	1236
AspLEI	GCGC	4 cut(s)	492, 622, 657, 1137
AspS9I	GGNCC	1 cut(s)	113
AsuHPI	GGTGA	3 cut(s)	19, 175, 1890
AsuNHI	GCTAGC	1 cut(s)	437
AvaI	CYCGRG	2 cut(s)	169, 1487
BanII	GRGCYC	1 cut(s)	1560
BauI	CACGAG	3 cut(s)	508, 1588, 1601
BbsI	GAAGAC	2 cut(s)	402, 510
Bbv12I	GWGCWC	1 cut(s)	1560
BbvI	GCAGC	4 cut(s)	459, 532, 642, 1875
BccI	CCATC	7 cut(s)	38, 459, 533, 859, 998, 1037, 1304
BceAI	ACGGC	2 cut(s)	1562, 1855
BcgI	CGANNNNNNTGC	2 cut(s)	527, 561
BciT130I	CCWGG	2 cut(s)	1260, 1473
BclI	TGATCA	1 cut(s)	1710
BcoDI	GTCTC	1 cut(s)	1759
BfaI	CTAG	5 cut(s)	438, 482, 1661, 1730, 1926
BfmI	CTRYAG	2 cut(s)	349, 1531
BfoI	RGCGCY	1 cut(s)	658
BfuAI	ACCTGC	1 cut(s)	194
BisI	GCNGC	6 cut(s)	282, 448, 546, 631, 1889, 1954
BlsI	GCNGC	6 cut(s)	283, 449, 547, 632, 1890, 1955
BmcAI	AGTACT	1 cut(s)	996
Bme1390I	CCNGG	2 cut(s)	1260, 1473
BmeRI	GACNNNNNGTC	1 cut(s)	707
BmeT110I	CYCGRG	2 cut(s)	169, 1487
BmgBI	CACGTC	2 cut(s)	364, 1354
BmgT120I	GGNCC	1 cut(s)	113
BmrFI	CCNGG	2 cut(s)	1260, 1473
BmsI	GCATC	5 cut(s)	547, 555, 882, 1340, 1603
BmtI	GCTAGC	1 cut(s)	441
BoxI	GACNNNNGTC	1 cut(s)	300
BpiI	GAAGAC	2 cut(s)	402, 510
BplI	GAGNNNNNCTC	2 cut(s)	1176, 1208
BpmI	CTGGAG	2 cut(s)	1455, 1678
BpuEI	CTTGAG	1 cut(s)	1783
Bsa29I	ATCGAT	1 cut(s)	1860
BsaBI	GATNNNNATC	1 cut(s)	1295
BsaI	GGTCTC	1 cut(s)	1759
BsaJI	CCNNGG	4 cut(s)	928, 1271, 1620, 1908
BsaWI	WCCGGW	1 cut(s)	202
Bsc4I	CCNNNNNNNGG	3 cut(s)	122, 539, 1676
Bse118I	RCCGGY	1 cut(s)	513
Bse1I	ACTGG	2 cut(s)	617, 749
Bse3DI	GCAATG	3 cut(s)	196, 448, 1713
Bse8I	GATNNNNATC	1 cut(s)	1295
BseBI	CCWGG	2 cut(s)	1260, 1473
BseCI	ATCGAT	1 cut(s)	1860
BseDI	CCNNGG	4 cut(s)	928, 1271, 1620, 1908
BseGI	GGATG	3 cut(s)	873, 1048, 1565
BseJI	GATNNNNATC	1 cut(s)	1295
BseLI	CCNNNNNNNGG	3 cut(s)	122, 539, 1676
BseMI	GCAATG	3 cut(s)	196, 448, 1713
BseNI	ACTGG	2 cut(s)	617, 749
BseRI	GAGGAG	3 cut(s)	658, 1181, 1853
BseXI	GCAGC	4 cut(s)	459, 532, 642, 1875
Bsh1236I	CGCG	1 cut(s)	1307
Bsh1285I	CGRYCG	1 cut(s)	334
BshFI	GGCC	3 cut(s)	86, 114, 1724
BshVI	ATCGAT	1 cut(s)	1860
BsiEI	CGRYCG	1 cut(s)	334
BsiHKAI	GWGCWC	1 cut(s)	1560
BsiHKCI	CYCGRG	2 cut(s)	169, 1487
BsiSI	CCGG	2 cut(s)	203, 514
BslFI	GGGAC	2 cut(s)	841, 1480
BslI	CCNNNNNNNGG	3 cut(s)	122, 539, 1676
BsmAI	GTCTC	1 cut(s)	1759
BsmFI	GGGAC	2 cut(s)	841, 1480
BsmI	GAATGC	2 cut(s)	1505, 1913
BsnI	GGCC	3 cut(s)	86, 114, 1724
Bso31I	GGTCTC	1 cut(s)	1759
BsoBI	CYCGRG	2 cut(s)	169, 1487
Bsp1286I	GDGCHC	1 cut(s)	1560
Bsp143I	GATC	9 cut(s)	180, 331, 358, 697, 847, 1483, 1605, 1710, 1882
Bsp19I	CCATGG	3 cut(s)	928, 1271, 1620
BspANI	GGCC	3 cut(s)	86, 114, 1724
BspDI	ATCGAT	1 cut(s)	1860
BspFNI	CGCG	1 cut(s)	1307
BspHI	TCATGA	1 cut(s)	1104
BspMI	ACCTGC	1 cut(s)	194
BspOI	GCTAGC	1 cut(s)	441
BspPI	GGATC	3 cut(s)	842, 1478, 1877
BspTNI	GGTCTC	1 cut(s)	1759
BsrBI	CCGCTC	1 cut(s)	1052
BsrDI	GCAATG	3 cut(s)	196, 448, 1713
BsrFI	RCCGGY	1 cut(s)	513
BsrI	ACTGG	2 cut(s)	617, 749
BssAI	RCCGGY	1 cut(s)	513
BssECI	CCNNGG	4 cut(s)	928, 1271, 1620, 1908
BssMI	GATC	9 cut(s)	180, 331, 358, 697, 847, 1483, 1605, 1710, 1882
BssNAI	GTATAC	2 cut(s)	820, 1805
BssSI	CACGAG	3 cut(s)	508, 1588, 1601
BssT1I	CCWWGG	3 cut(s)	928, 1271, 1620
Bst1107I	GTATAC	2 cut(s)	820, 1805
Bst2BI	CACGAG	3 cut(s)	508, 1588, 1601
Bst2UI	CCWGG	2 cut(s)	1260, 1473
Bst4CI	ACNGT	5 cut(s)	434, 790, 1021, 1317, 1349
Bst6I	CTCTTC	2 cut(s)	743, 1430
BstAPI	GCANNNNNTGC	1 cut(s)	636
BstDEI	CTNAG	1 cut(s)	1675
BstDSI	CCRYGG	4 cut(s)	928, 1271, 1620, 1908
BstEII	GGTNACC	1 cut(s)	164
BstF5I	GGATG	3 cut(s)	873, 1048, 1565
BstFNI	CGCG	1 cut(s)	1307
BstH2I	RGCGCY	1 cut(s)	658
BstHHI	GCGC	4 cut(s)	492, 622, 657, 1137
BstKTI	GATC	9 cut(s)	183, 334, 361, 700, 850, 1486, 1608, 1713, 1885
BstMAI	GTCTC	1 cut(s)	1759
BstMBI	GATC	9 cut(s)	180, 331, 358, 697, 847, 1483, 1605, 1710, 1882
BstMCI	CGRYCG	1 cut(s)	334
BstNI	CCWGG	2 cut(s)	1260, 1473
BstNSI	RCATGY	1 cut(s)	415
BstPAI	GACNNNNGTC	1 cut(s)	300
BstPI	GGTNACC	1 cut(s)	164
BstSCI	CCNGG	2 cut(s)	1258, 1471
BstSFI	CTRYAG	2 cut(s)	349, 1531
BstUI	CGCG	1 cut(s)	1307
BstV1I	GCAGC	4 cut(s)	459, 532, 642, 1875
BstV2I	GAAGAC	2 cut(s)	402, 510
BstZ17I	GTATAC	2 cut(s)	820, 1805
Bsu15I	ATCGAT	1 cut(s)	1860
BsuRI	GGCC	3 cut(s)	86, 114, 1724
BsuTUI	ATCGAT	1 cut(s)	1860
BtgI	CCRYGG	4 cut(s)	928, 1271, 1620, 1908
BtgZI	GCGATG	2 cut(s)	1017, 1827
BtrI	CACGTC	2 cut(s)	364, 1354
BtsCI	GGATG	3 cut(s)	873, 1048, 1565
BtsI	GCAGTG	2 cut(s)	700, 1177
BtsIMutI	CAGTG	3 cut(s)	700, 1177, 1313
BveI	ACCTGC	1 cut(s)	194
CciI	TCATGA	1 cut(s)	1104
CfoI	GCGC	4 cut(s)	492, 622, 657, 1137
Cfr10I	RCCGGY	1 cut(s)	513
Cfr13I	GGNCC	1 cut(s)	113
ClaI	ATCGAT	1 cut(s)	1860
CseI	GACGC	1 cut(s)	1055
Csp6I	GTAC	6 cut(s)	885, 921, 935, 995, 1201, 1207
CviQI	GTAC	6 cut(s)	885, 921, 935, 995, 1201, 1207
DdeI	CTNAG	1 cut(s)	1675
DpnI	GATC	9 cut(s)	182, 333, 360, 699, 849, 1485, 1607, 1712, 1884
DpnII	GATC	9 cut(s)	180, 331, 358, 697, 847, 1483, 1605, 1710, 1882
DrdI	GACNNNNNNGTC	1 cut(s)	1930
DriI	GACNNNNNGTC	1 cut(s)	707
DseDI	GACNNNNNNGTC	1 cut(s)	1930
EaeI	YGGCCR	1 cut(s)	1722
Eam1104I	CTCTTC	2 cut(s)	743, 1430
Eam1105I	GACNNNNNGTC	1 cut(s)	707
EarI	CTCTTC	2 cut(s)	743, 1430
Ecl136II	GAGCTC	1 cut(s)	1558
Eco130I	CCWWGG	3 cut(s)	928, 1271, 1620
Eco147I	AGGCCT	1 cut(s)	86
Eco24I	GRGCYC	1 cut(s)	1560
Eco31I	GGTCTC	1 cut(s)	1759
Eco53kI	GAGCTC	1 cut(s)	1558
Eco57I	CTGAAG	3 cut(s)	307, 414, 504
Eco88I	CYCGRG	2 cut(s)	169, 1487
Eco91I	GGTNACC	1 cut(s)	164
EcoICRI	GAGCTC	1 cut(s)	1558
EcoO65I	GGTNACC	1 cut(s)	164
EcoRI	GAATTC	2 cut(s)	496, 677
EcoRII	CCWGG	2 cut(s)	1258, 1471
EcoT14I	CCWWGG	3 cut(s)	928, 1271, 1620
EcoT22I	ATGCAT	2 cut(s)	562, 1333
EcoT38I	GRGCYC	1 cut(s)	1560
ErhI	CCWWGG	3 cut(s)	928, 1271, 1620
FaqI	GGGAC	2 cut(s)	841, 1480
FauI	CCCGC	3 cut(s)	644, 1032, 1136
FbaI	TGATCA	1 cut(s)	1710
FblI	GTMKAC	6 cut(s)	69, 819, 1616, 1665, 1804, 1934
Fnu4HI	GCNGC	6 cut(s)	282, 448, 546, 631, 1889, 1954
FokI	GGATG	3 cut(s)	860, 1055, 1552
FriOI	GRGCYC	1 cut(s)	1560
Fsp4HI	GCNGC	6 cut(s)	282, 448, 546, 631, 1889, 1954
FspBI	CTAG	5 cut(s)	438, 482, 1661, 1730, 1926
FspI	TGCGCA	1 cut(s)	621
GlaI	GCGC	4 cut(s)	491, 621, 656, 1136
GluI	GCNGC	6 cut(s)	282, 448, 546, 631, 1889, 1954
GsuI	CTGGAG	2 cut(s)	1455, 1678
HaeII	RGCGCY	1 cut(s)	658
HaeIII	GGCC	3 cut(s)	86, 114, 1724
HapII	CCGG	2 cut(s)	203, 514
HgaI	GACGC	1 cut(s)	1055
HhaI	GCGC	4 cut(s)	492, 622, 657, 1137
Hin6I	GCGC	4 cut(s)	490, 620, 655, 1135
HinP1I	GCGC	4 cut(s)	490, 620, 655, 1135
HincII	GTYRAC	1 cut(s)	1582
HindII	GTYRAC	1 cut(s)	1582
HpaII	CCGG	2 cut(s)	203, 514
HphI	GGTGA	3 cut(s)	19, 175, 1890
Hpy166II	GTNNAC	9 cut(s)	70, 305, 820, 1201, 1582, 1617, 1666, 1805, 1935
Hpy188I	TCNGA	6 cut(s)	220, 358, 406, 1336, 1690, 1746
Hpy188III	TCNNGA	8 cut(s)	178, 589, 1087, 1105, 1117, 1487, 1588, 1695
Hpy8I	GTNNAC	9 cut(s)	70, 305, 820, 1201, 1582, 1617, 1666, 1805, 1935
Hpy99I	CGWCG	4 cut(s)	224, 794, 831, 905
HpyAV	CCTTC	6 cut(s)	55, 385, 748, 907, 1303, 1779
HpyCH4III	ACNGT	5 cut(s)	434, 790, 1021, 1317, 1349
HpyCH4IV	ACGT	5 cut(s)	101, 363, 826, 1353, 1437
HpyCH4V	TGCA	8 cut(s)	189, 560, 568, 630, 693, 774, 1167, 1331
HpyF3I	CTNAG	1 cut(s)	1675
HpySE526I	ACGT	5 cut(s)	101, 363, 826, 1353, 1437
HspAI	GCGC	4 cut(s)	490, 620, 655, 1135
Ksp22I	TGATCA	1 cut(s)	1710
Kzo9I	GATC	9 cut(s)	180, 331, 358, 697, 847, 1483, 1605, 1710, 1882
LmnI	GCTCC	2 cut(s)	478, 1462
Lsp1109I	GCAGC	4 cut(s)	459, 532, 642, 1875
LweI	GCATC	5 cut(s)	547, 555, 882, 1340, 1603
MaeI	CTAG	5 cut(s)	438, 482, 1661, 1730, 1926
MaeII	ACGT	5 cut(s)	101, 363, 826, 1353, 1437
MaeIII	GTNAC	7 cut(s)	25, 164, 862, 1175, 1349, 1438, 1751
MalI	GATC	9 cut(s)	182, 333, 360, 699, 849, 1485, 1607, 1712, 1884
MbiI	CCGCTC	1 cut(s)	1052
MboI	GATC	9 cut(s)	180, 331, 358, 697, 847, 1483, 1605, 1710, 1882
MboII	GAAGA	9 cut(s)	87, 407, 510, 760, 974, 1229, 1316, 1378, 1417
MfeI	CAATTG	1 cut(s)	634
MhlI	GDGCHC	1 cut(s)	1560
MluCI	AATT	9 cut(s)	367, 496, 625, 634, 677, 733, 973, 1081, 1609
MlyI	GAGTC	4 cut(s)	164, 500, 1462, 1685
MmeI	TCCRAC	1 cut(s)	243
Mph1103I	ATGCAT	2 cut(s)	562, 1333
MroXI	GAANNNNTTC	1 cut(s)	1236
MseI	TTAA	2 cut(s)	1788, 1874
MslI	CAYNNNNRTG	3 cut(s)	1032, 1718, 1918
MspA1I	CMGCKG	3 cut(s)	779, 1888, 1953
MspI	CCGG	2 cut(s)	203, 514
MspR9I	CCNGG	2 cut(s)	1260, 1473
MunI	CAATTG	1 cut(s)	634
Mva1269I	GAATGC	2 cut(s)	1505, 1913
MvaI	CCWGG	2 cut(s)	1260, 1473
MvnI	CGCG	1 cut(s)	1307
NcoI	CCATGG	3 cut(s)	928, 1271, 1620
NdeII	GATC	9 cut(s)	180, 331, 358, 697, 847, 1483, 1605, 1710, 1882
NheI	GCTAGC	1 cut(s)	437
NmeAIII	GCCGAG	1 cut(s)	1208
NmuCI	GTSAC	5 cut(s)	25, 1175, 1349, 1438, 1751
NsbI	TGCGCA	1 cut(s)	621
NsiI	ATGCAT	2 cut(s)	562, 1333
NspI	RCATGY	1 cut(s)	415
PagI	TCATGA	1 cut(s)	1104
PaqCI	CACCTGC	1 cut(s)	194
PceI	AGGCCT	1 cut(s)	86
PcsI	WCGNNNNNNNCGW	3 cut(s)	87, 506, 1180
PctI	GAATGC	2 cut(s)	1505, 1913
PdmI	GAANNNNTTC	1 cut(s)	1236
PfeI	GAWTC	8 cut(s)	4, 78, 401, 663, 983, 1636, 1685, 1904
PkrI	GCNGC	6 cut(s)	283, 449, 547, 632, 1890, 1955
Ple19I	CGATCG	1 cut(s)	334
PleI	GAGTC	4 cut(s)	163, 500, 1462, 1685
PpsI	GAGTC	4 cut(s)	163, 500, 1462, 1685
PshAI	GACNNNNGTC	1 cut(s)	300
Psp124BI	GAGCTC	1 cut(s)	1560
Psp6I	CCWGG	2 cut(s)	1258, 1471
PspEI	GGTNACC	1 cut(s)	164
PspGI	CCWGG	2 cut(s)	1258, 1471
PspPI	GGNCC	1 cut(s)	113
PsrI	GAACNNNNNNTAC	2 cut(s)	110, 142
PvuI	CGATCG	1 cut(s)	334
PvuII	CAGCTG	1 cut(s)	779
RsaI	GTAC	6 cut(s)	886, 922, 936, 996, 1202, 1208
RsaNI	GTAC	6 cut(s)	885, 921, 935, 995, 1201, 1207
RseI	CAYNNNNRTG	3 cut(s)	1032, 1718, 1918
SacI	GAGCTC	1 cut(s)	1560
SaqAI	TTAA	2 cut(s)	1788, 1874
SatI	GCNGC	6 cut(s)	282, 448, 546, 631, 1889, 1954
Sau3AI	GATC	9 cut(s)	180, 331, 358, 697, 847, 1483, 1605, 1710, 1882
Sau96I	GGNCC	1 cut(s)	113
ScaI	AGTACT	1 cut(s)	996
SchI	GAGTC	4 cut(s)	164, 500, 1462, 1685
ScrFI	CCNGG	2 cut(s)	1260, 1473
SduI	GDGCHC	1 cut(s)	1560
SfaNI	GCATC	5 cut(s)	547, 555, 882, 1340, 1603
SfcI	CTRYAG	2 cut(s)	349, 1531
SmiMI	CAYNNNNRTG	3 cut(s)	1032, 1718, 1918
SmlI	CTYRAG	1 cut(s)	1762
SmoI	CTYRAG	1 cut(s)	1762
Sse9I	AATT	9 cut(s)	367, 496, 625, 634, 677, 733, 973, 1081, 1609
SseBI	AGGCCT	1 cut(s)	86
SspI	AATATT	1 cut(s)	1369
SspMI	CTAG	5 cut(s)	438, 482, 1661, 1730, 1926
SstI	GAGCTC	1 cut(s)	1560
StuI	AGGCCT	1 cut(s)	86
StyD4I	CCNGG	2 cut(s)	1258, 1471
StyI	CCWWGG	3 cut(s)	928, 1271, 1620
TaaI	ACNGT	5 cut(s)	434, 790, 1021, 1317, 1349
TaiI	ACGT	5 cut(s)	104, 366, 829, 1356, 1440
TaqII	GACCGA	1 cut(s)	87
TasI	AATT	9 cut(s)	367, 496, 625, 634, 677, 733, 973, 1081, 1609
TatI	WGTACW	3 cut(s)	934, 994, 1206
TauI	GCSGC	2 cut(s)	284, 1956
TfiI	GAWTC	8 cut(s)	4, 78, 401, 663, 983, 1636, 1685, 1904
Tru1I	TTAA	2 cut(s)	1788, 1874
Tru9I	TTAA	2 cut(s)	1788, 1874
TscAI	CASTG	3 cut(s)	700, 1184, 1320
TseFI	GTSAC	5 cut(s)	25, 1175, 1349, 1438, 1751
TseI	GCWGC	4 cut(s)	447, 545, 630, 1888
Tsp45I	GTSAC	5 cut(s)	25, 1175, 1349, 1438, 1751
TspGWI	ACGGA	3 cut(s)	55, 1257, 1897
TspRI	CASTG	3 cut(s)	700, 1184, 1320
XapI	RAATTY	2 cut(s)	496, 677
XceI	RCATGY	1 cut(s)	415
XmiI	GTMKAC	6 cut(s)	69, 819, 1616, 1665, 1804, 1934
XmnI	GAANNNNTTC	1 cut(s)	1236
XspI	CTAG	5 cut(s)	438, 482, 1661, 1730, 1926
ZrmI	AGTACT	1 cut(s)	996
Zsp2I	ATGCAT	2 cut(s)	562, 1333

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.