Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000194.1

Orthogroup ID

OG0000786

Physical Location & Seq

Genomic Coordinates Reverse (-)

49168 .. 53142

Gene Structure 3975 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000194.1_g000017.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

atgtcatcacctatcccttacctccttgcagctcttctctcacccttgttattcaacttccatggaagcaaagccaactttgtacccacaaaaaattgccccatatacaattgtagtaagggccctgattttcactaccctttttggaaaattgaagactccaccgccgatcaatattgtggttaccctggttttggtctcaattgctcagagtctggagagcccatactgagtctcccaaataatgatttctactatgtgaaagacataaactttactgattccaccatcaccctcgttaacattgacgtcgtcggtcaacaatgccctaagccaagacacagtatgagtgtaggcacgctcccattggattattccccattggatgtgaacctgagcttctacttcaactgcacttcctttcctgatcctgttgtgcctcccataacctgcttggtaatatggggtaccaaaatgtcttatgttttcaaggagggagagcaaccagatgggtttgaatggtctggaagttgtgaggagaatgtggtggtgactgtgatgaagagtaaggagctttatattgataagttgattggtgcttttggaggacttatgaaccaggggtttgtgcttaactggaccacggcgaaggagtgcgcttcgtgtgagagtggtggtggtttgtgtgggtacaaccccactaaagctgatgagtttctctgcttctgcaaatatagtgatggcctatgcgagaagaaagctccagaaaaaaaaatattaggccctgacgagacaccggatatgagacaaccgactcgagtcaggtccggctctcctacgcgcaactggagattgaaggttgtcataggcctttgcttggttattggaactatagctgtaatgtgcttcattttttttatatggcgacgccgcaacagaaatcgatatggtccatcatcctacgcatctcgaatcatctattctaaaagctattccagaagtgatactgagaagggaagtgcatacactggagttcatgtattcacctacaatgaacttgaacaagcaacaaactatttcgattcatctaaagaacttggtggtggaggctttggcagagtttactatggaaaagtccgtgatgggcgagcagttgctgtcaagcgactatatgaaaccaattgcaggagagttgagcagttcctgaatgaaattgagattttagctcgcctacgccaccgaaaccttgtgttactctatgggtgcacctctcgtcacagccgtgaactcctccttgtctacgaatatgttcccaatggaactcttgctgatcatcttcatggtggaaaagcaaaacccggtgcactgccatggcatactcgaatcaacattgccgtagaaactgcaagtgcattgtcctatcttcatgcgtctgagatcatccaccgtgacgtgaaaaccactaacattcttcttgacaacaatttctgtgtcaaagtagcagattttggactatctcgtctcttgcccacggatgtcacccatgtatcaactgctccacaaggaactccaggttatgttgatcctgattataaccaatgctaccagcttactatgaagagtgatgtctatagcttcggtgtggtcctggttgaactcatatcatccttgcctgctgttgatatcacaaggcatcgacaggagatcaatttatcaagcatggctatcaacaagattcagaaacatgcattgcatgagctagtggatccatccctggggtatgaatcggactttaaagtaagaaaaatgatcaatgcagtggcggaattagcgtttcagtgcctgcaaaatgagactgacatgagaccttctatggttgatgtggaaaatgaactaaagaggatacagagtgatgattttagtaaagaaaaggcagaggaaattgatatttcagctgatgatgttgtgctgttaaagagtggtcctttgccaccttcaccagattctgtgacaataaattgggttagcatgtcttcaacaccaaatgatagcactgcttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010228 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023052 GO:0031668 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0036211 GO:0042221 GO:0042631 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0104004 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

686

Amino Acids

76.7

Weight (kDa)

6.06

Isoelectric Point (pI)

42.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18390 AT1G18390
fragaria_vesca	FvH4_5g11760 FvH4_5g11760 FvH4_5g11790
malus_domestica	MD06G1218900.v1.1 MD06G1219200.v1.1 MD14G1228700.v1.1
prunus_persica	Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1
pyrus_communis	pycom06g19560 pycom06g19580 pycom14g19000
rosa_chinensis	RchiOBHm_Chr7g0185891 RchiOBHm_Chr7g0185941 RchiOBHm_Chr7g0185971 RchiOBHm_Chr7g0186001 RchiOBHm_Chr7g0186021 RchiOBHm_Chr7g0209991 RchiOBHm_Chr7g0210001
rosa_laevigata	RLG00000003071 RLG00000004872 RLG00000004873 RLG00000004875 RLG00000005413
rosa_multiflora	Rmu_co8007212.1_g000001 Rmu_co8076798.1_g000001 Rmu_sc0000194.1_g000013 Rmu_sc0000194.1_g000017 Rmu_sc0000194.1_g000019 Rmu_sc0004509.1_g000017 Rmu_sc0004509.1_g000018 Rmu_sc0005665.1_g000002 Rmu_sc0005665.1_g000004 Rmu_sc0005665.1_g000020 Rmu_sc0005665.1_g000023 Rmu_sc0005665.1_g000035
rosa_roxburghii	Rroxscaffold_1G00039510 Rroxscaffold_3G00248670 Rroxscaffold_3G00257880 Rroxscaffold_3G00268500 Rroxscaffold_3G00268510 Rroxscaffold_3G00268530 Rroxscaffold_3G00268580
rosa_rugosa	Rorug06G0471800 Rorug07G0117900
rosa_samantha	Rh1BG104700 Rh4CG290300 Rh7AG070300 Rh7AG070400 Rh7AG070600 Rh7AG251700 Rh7BG086300 Rh7BG086400 Rh7BG246300 Rh7CG077400 Rh7CG077800 Rh7CG078000 Rh7CG268500 Rh7DG077400 Rh7DG077600 Rh7DG077900 Rh7DG078000 Rh7DG258500
rosa_wichuraiana	Rw7G006440 Rw7G006470 Rw7G006480 Rw7G021370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1593
AasI	GACNNNNNNGTC	1 cut(s)	1518
AatII	GACGTC	1 cut(s)	312
Acc36I	ACCTGC	1 cut(s)	458
Acc65I	GGTACC	1 cut(s)	467
AccB1I	GGYRCC	1 cut(s)	467
AccI	GTMKAC	1 cut(s)	1299
AccII	CGCG	1 cut(s)	841
AciI	CCGC	3 cut(s)	165, 931, 1823
AclWI	GGATC	4 cut(s)	422, 1577, 1760, 1773
AcyI	GRCGYC	2 cut(s)	309, 928
AfaI	GTAC	3 cut(s)	84, 469, 692
AfiI	CCNNNNNNNGG	4 cut(s)	194, 877, 1185, 1775
AgsI	TTSAA	9 cut(s)	55, 155, 409, 490, 518, 856, 1061, 1655, 2037
AjiI	CACGTC	1 cut(s)	1453
AjnI	CCWGG	5 cut(s)	187, 618, 1570, 1647, 1773
AleI	CACNNNNGTG	1 cut(s)	1281
Alw21I	GWGCWC	2 cut(s)	1268, 1366
Alw26I	GTCTC	7 cut(s)	203, 239, 785, 799, 1526, 1847, 1858
Alw44I	GTGCAC	2 cut(s)	1264, 1362
AlwI	GGATC	4 cut(s)	422, 1577, 1760, 1773
AlwNI	CAGNNNCTG	5 cut(s)	215, 1157, 1204, 1843, 2006
Ama87I	CYCGRG	1 cut(s)	816
AoxI	GGCC	4 cut(s)	121, 742, 781, 868
ApaI	GGGCCC	1 cut(s)	125
ApaLI	GTGCAC	2 cut(s)	1264, 1362
ApeKI	GCWGC	1 cut(s)	29
Asp700I	GAANNNNTTC	1 cut(s)	1308
Asp718I	GGTACC	1 cut(s)	467
AspLEI	GCGC	2 cut(s)	659, 843
AspS9I	GGNCC	8 cut(s)	121, 122, 639, 782, 825, 950, 1645, 1982
AsuC2I	CCSGG	1 cut(s)	1359
AsuHPI	GGTGA	6 cut(s)	33, 283, 562, 1036, 1531, 1989
AvaI	CYCGRG	1 cut(s)	816
AvaII	GGWCC	5 cut(s)	639, 825, 950, 1645, 1982
BaeGI	GKGCMC	3 cut(s)	125, 1268, 1366
BaeI	ACNNNNGTAYC	2 cut(s)	1530, 1563
BamHI	GGATCC	1 cut(s)	1765
BanI	GGYRCC	1 cut(s)	467
BanII	GRGCYC	2 cut(s)	125, 225
BbsI	GAAGAC	2 cut(s)	162, 2025
Bbv12I	GWGCWC	2 cut(s)	1268, 1366
BbvI	GCAGC	1 cut(s)	41
BccI	CCATC	6 cut(s)	296, 503, 734, 961, 1136, 1777
BceAI	ACGGC	3 cut(s)	660, 1266, 1379
BciT130I	CCWGG	5 cut(s)	189, 620, 1572, 1649, 1775
BciVI	GTATCC	1 cut(s)	1896
BclI	TGATCA	2 cut(s)	1330, 1809
BcnI	CCSGG	1 cut(s)	1359
BcoDI	GTCTC	7 cut(s)	203, 239, 785, 799, 1526, 1847, 1858
BfaI	CTAG	1 cut(s)	1760
BfmI	CTRYAG	2 cut(s)	891, 1630
BfuAI	ACCTGC	1 cut(s)	458
BfuI	GTATCC	1 cut(s)	1896
BisI	GCNGC	2 cut(s)	30, 931
BlsI	GCNGC	2 cut(s)	31, 932
Bme1390I	CCNGG	6 cut(s)	189, 620, 1359, 1572, 1649, 1775
Bme18I	GGWCC	5 cut(s)	639, 825, 950, 1645, 1982
BmeT110I	CYCGRG	1 cut(s)	816
BmgBI	CACGTC	1 cut(s)	1453
BmgT120I	GGNCC	8 cut(s)	121, 122, 639, 782, 825, 950, 1645, 1982
BmiI	GGNNCC	3 cut(s)	123, 469, 1767
BmrFI	CCNGG	6 cut(s)	189, 620, 1359, 1572, 1649, 1775
BmsI	GCATC	2 cut(s)	974, 1702
BoxI	GACNNNNGTC	1 cut(s)	818
BpiI	GAAGAC	2 cut(s)	162, 2025
BpmI	CTGGAG	5 cut(s)	237, 747, 868, 1050, 1554
Bpu10I	CCTNAGC	2 cut(s)	330, 395
BpuMI	CCSGG	1 cut(s)	1359
Bsa29I	ATCGAT	1 cut(s)	943
BsaHI	GRCGYC	2 cut(s)	309, 928
BsaI	GGTCTC	2 cut(s)	203, 1858
BsaJI	CCNNGG	8 cut(s)	61, 187, 619, 642, 1370, 1530, 1773, 1774
BsaWI	WCCGGW	1 cut(s)	796
BsaXI	ACNNNNNCTCC	4 cut(s)	219, 249, 1023, 1053
Bsc4I	CCNNNNNNNGG	4 cut(s)	194, 877, 1185, 1775
Bse1I	ACTGG	3 cut(s)	641, 851, 1033
Bse3DI	GCAATG	2 cut(s)	1389, 1748
BseBI	CCWGG	5 cut(s)	189, 620, 1572, 1649, 1775
BseCI	ATCGAT	1 cut(s)	943
BseDI	CCNNGG	8 cut(s)	61, 187, 619, 642, 1370, 1530, 1773, 1774
BseGI	GGATG	6 cut(s)	391, 956, 1440, 1540, 1664, 1769
BseLI	CCNNNNNNNGG	4 cut(s)	194, 877, 1185, 1775
BseMI	GCAATG	2 cut(s)	1389, 1748
BseMII	CTCAG	5 cut(s)	221, 222, 386, 999, 1425
BseNI	ACTGG	3 cut(s)	641, 851, 1033
BseRI	GAGGAG	2 cut(s)	551, 1280
BseSI	GKGCMC	3 cut(s)	125, 1268, 1366
BseXI	GCAGC	1 cut(s)	41
BsgI	GTGCAG	1 cut(s)	397
Bsh1236I	CGCG	1 cut(s)	841
BshFI	GGCC	4 cut(s)	123, 744, 783, 870
BshNI	GGYRCC	1 cut(s)	467
BshVI	ATCGAT	1 cut(s)	943
BsiHKAI	GWGCWC	2 cut(s)	1268, 1366
BsiHKCI	CYCGRG	1 cut(s)	816
BsiSI	CCGG	3 cut(s)	797, 828, 1359
BslI	CCNNNNNNNGG	4 cut(s)	194, 877, 1185, 1775
BsmAI	GTCTC	7 cut(s)	203, 239, 785, 799, 1526, 1847, 1858
BsmBI	CGTCTC	1 cut(s)	1526
BsnI	GGCC	4 cut(s)	123, 744, 783, 870
Bso31I	GGTCTC	2 cut(s)	203, 1858
BsoBI	CYCGRG	1 cut(s)	816
Bsp120I	GGGCCC	1 cut(s)	121
Bsp1286I	GDGCHC	4 cut(s)	125, 225, 1268, 1366
Bsp143I	GATC	8 cut(s)	169, 427, 1330, 1437, 1582, 1704, 1765, 1809
Bsp19I	CCATGG	2 cut(s)	61, 1370
BspACI	CCGC	3 cut(s)	165, 931, 1823
BspANI	GGCC	4 cut(s)	123, 744, 783, 870
BspCNI	CTCAG	5 cut(s)	221, 222, 387, 1000, 1426
BspDI	ATCGAT	1 cut(s)	943
BspFNI	CGCG	1 cut(s)	841
BspLI	GGNNCC	3 cut(s)	123, 469, 1767
BspMI	ACCTGC	1 cut(s)	458
BspPI	GGATC	4 cut(s)	422, 1577, 1760, 1773
BspQI	GCTCTTC	1 cut(s)	39
BspT107I	GGYRCC	1 cut(s)	467
BspTNI	GGTCTC	2 cut(s)	203, 1858
BsrDI	GCAATG	2 cut(s)	1389, 1748
BsrI	ACTGG	3 cut(s)	641, 851, 1033
BssECI	CCNNGG	8 cut(s)	61, 187, 619, 642, 1370, 1530, 1773, 1774
BssMI	GATC	8 cut(s)	169, 427, 1330, 1437, 1582, 1704, 1765, 1809
BssNI	GRCGYC	2 cut(s)	309, 928
BssT1I	CCWWGG	2 cut(s)	61, 1370
Bst2UI	CCWGG	5 cut(s)	189, 620, 1572, 1649, 1775
Bst4CI	ACNGT	3 cut(s)	344, 556, 1448
Bst6I	CTCTTC	3 cut(s)	39, 557, 1613
BstACI	GRCGYC	2 cut(s)	309, 928
BstC8I	GCNNGC	5 cut(s)	359, 1149, 1228, 1674, 1844
BstDEI	CTNAG	6 cut(s)	208, 230, 330, 395, 1008, 1434
BstDSI	CCRYGG	4 cut(s)	61, 642, 1370, 1530
BstEII	GGTNACC	1 cut(s)	182
BstF5I	GGATG	6 cut(s)	391, 956, 1440, 1540, 1664, 1769
BstFNI	CGCG	1 cut(s)	841
BstHHI	GCGC	2 cut(s)	659, 843
BstKTI	GATC	8 cut(s)	172, 430, 1333, 1440, 1585, 1707, 1768, 1812
BstMAI	GTCTC	7 cut(s)	203, 239, 785, 799, 1526, 1847, 1858
BstMBI	GATC	8 cut(s)	169, 427, 1330, 1437, 1582, 1704, 1765, 1809
BstMWI	GCNNNNNNNGC	1 cut(s)	1829
BstNI	CCWGG	5 cut(s)	189, 620, 1572, 1649, 1775
BstNSI	RCATGY	2 cut(s)	1748, 2032
BstPAI	GACNNNNGTC	1 cut(s)	818
BstPI	GGTNACC	1 cut(s)	182
BstSCI	CCNGG	6 cut(s)	187, 618, 1357, 1570, 1647, 1773
BstSFI	CTRYAG	2 cut(s)	891, 1630
BstSLI	GKGCMC	3 cut(s)	125, 1268, 1366
BstUI	CGCG	1 cut(s)	841
BstV1I	GCAGC	1 cut(s)	41
BstV2I	GAAGAC	2 cut(s)	162, 2025
BstX2I	RGATCY	1 cut(s)	1765
BstYI	RGATCY	1 cut(s)	1765
Bsu15I	ATCGAT	1 cut(s)	943
BsuI	GTATCC	1 cut(s)	1896
BsuRI	GGCC	4 cut(s)	123, 744, 783, 870
BsuTUI	ATCGAT	1 cut(s)	943
BtgI	CCRYGG	4 cut(s)	61, 642, 1370, 1530
BtrI	CACGTC	1 cut(s)	1453
BtsCI	GGATG	6 cut(s)	391, 956, 1440, 1540, 1664, 1769
BtsI	GCAGTG	3 cut(s)	1364, 1824, 2052
BtsIMutI	CAGTG	5 cut(s)	1026, 1364, 1824, 1844, 2052
BveI	ACCTGC	1 cut(s)	458
Cac8I	GCNNGC	5 cut(s)	359, 1149, 1228, 1674, 1844
CaiI	CAGNNNCTG	5 cut(s)	215, 1157, 1204, 1843, 2006
CfoI	GCGC	2 cut(s)	659, 843
Cfr13I	GGNCC	8 cut(s)	121, 122, 639, 782, 825, 950, 1645, 1982
ClaI	ATCGAT	1 cut(s)	943
CseI	GACGC	2 cut(s)	936, 1419
Csp6I	GTAC	3 cut(s)	83, 468, 691
CviQI	GTAC	3 cut(s)	83, 468, 691
DdeI	CTNAG	6 cut(s)	208, 230, 330, 395, 1008, 1434
DpnI	GATC	8 cut(s)	171, 429, 1332, 1439, 1584, 1706, 1767, 1811
DpnII	GATC	8 cut(s)	169, 427, 1330, 1437, 1582, 1704, 1765, 1809
DraI	TTTAAA	1 cut(s)	1795
DrdI	GACNNNNNNGTC	1 cut(s)	1518
DseDI	GACNNNNNNGTC	1 cut(s)	1518
Eam1104I	CTCTTC	3 cut(s)	39, 557, 1613
EarI	CTCTTC	3 cut(s)	39, 557, 1613
EciI	GGCGGA	1 cut(s)	1838
Eco130I	CCWWGG	2 cut(s)	61, 1370
Eco147I	AGGCCT	1 cut(s)	870
Eco24I	GRGCYC	2 cut(s)	125, 225
Eco31I	GGTCTC	2 cut(s)	203, 1858
Eco32I	GATATC	1 cut(s)	1684
Eco47I	GGWCC	5 cut(s)	639, 825, 950, 1645, 1982
Eco88I	CYCGRG	1 cut(s)	816
Eco91I	GGTNACC	1 cut(s)	182
EcoO109I	RGGNCCY	3 cut(s)	121, 122, 782
EcoO65I	GGTNACC	1 cut(s)	182
EcoRII	CCWGG	5 cut(s)	187, 618, 1570, 1647, 1773
EcoRV	GATATC	1 cut(s)	1684
EcoT14I	CCWWGG	2 cut(s)	61, 1370
EcoT22I	ATGCAT	1 cut(s)	1750
EcoT38I	GRGCYC	2 cut(s)	125, 225
ErhI	CCWWGG	2 cut(s)	61, 1370
Esp3I	CGTCTC	1 cut(s)	1526
FbaI	TGATCA	2 cut(s)	1330, 1809
FblI	GTMKAC	1 cut(s)	1299
Fnu4HI	GCNGC	2 cut(s)	30, 931
FokI	GGATG	6 cut(s)	398, 943, 1427, 1547, 1651, 1756
FriOI	GRGCYC	2 cut(s)	125, 225
Fsp4HI	GCNGC	2 cut(s)	30, 931
FspBI	CTAG	1 cut(s)	1760
GlaI	GCGC	2 cut(s)	658, 842
GluI	GCNGC	2 cut(s)	30, 931
GsuI	CTGGAG	5 cut(s)	237, 747, 868, 1050, 1554
HaeIII	GGCC	4 cut(s)	123, 744, 783, 870
HapII	CCGG	3 cut(s)	797, 828, 1359
HgaI	GACGC	2 cut(s)	936, 1419
HhaI	GCGC	2 cut(s)	659, 843
Hin1I	GRCGYC	2 cut(s)	309, 928
Hin6I	GCGC	2 cut(s)	657, 841
HinP1I	GCGC	2 cut(s)	657, 841
HincII	GTYRAC	2 cut(s)	301, 320
HindII	GTYRAC	2 cut(s)	301, 320
HpaI	GTTAAC	1 cut(s)	301
HpaII	CCGG	3 cut(s)	797, 828, 1359
HphI	GGTGA	6 cut(s)	33, 283, 562, 1036, 1531, 1989
Hpy166II	GTNNAC	8 cut(s)	301, 320, 391, 1123, 1266, 1286, 1300, 1364
Hpy188I	TCNGA	4 cut(s)	211, 1435, 1740, 1789
Hpy188III	TCNNGA	9 cut(s)	216, 425, 525, 764, 969, 996, 1204, 1475, 1586
Hpy8I	GTNNAC	8 cut(s)	301, 320, 391, 1123, 1266, 1286, 1300, 1364
Hpy99I	CGWCG	3 cut(s)	314, 317, 930
HpyAV	CCTTC	5 cut(s)	643, 850, 1006, 1878, 2004
HpyCH4III	ACNGT	3 cut(s)	344, 556, 1448
HpyCH4IV	ACGT	2 cut(s)	309, 1452
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1829
HpyF3I	CTNAG	6 cut(s)	208, 230, 330, 395, 1008, 1434
HpySE526I	ACGT	2 cut(s)	309, 1452
Hsp92I	GRCGYC	2 cut(s)	309, 928
HspAI	GCGC	2 cut(s)	657, 841
KpnI	GGTACC	1 cut(s)	471
Ksp22I	TGATCA	2 cut(s)	1330, 1809
KspAI	GTTAAC	1 cut(s)	301
Kzo9I	GATC	8 cut(s)	169, 427, 1330, 1437, 1582, 1704, 1765, 1809
LguI	GCTCTTC	1 cut(s)	39
LmnI	GCTCC	4 cut(s)	366, 571, 766, 1561
Lsp1109I	GCAGC	1 cut(s)	41
LweI	GCATC	2 cut(s)	974, 1702
MaeI	CTAG	1 cut(s)	1760
MaeII	ACGT	2 cut(s)	309, 1452
MaeIII	GTNAC	7 cut(s)	182, 550, 1251, 1274, 1448, 1537, 2008
MalI	GATC	8 cut(s)	171, 429, 1332, 1439, 1584, 1706, 1767, 1811
MboI	GATC	8 cut(s)	169, 427, 1330, 1437, 1582, 1704, 1765, 1809
MboII	GAAGA	9 cut(s)	26, 167, 574, 766, 1328, 1415, 1463, 1630, 2025
MfeI	CAATTG	3 cut(s)	109, 202, 1180
MflI	RGATCY	1 cut(s)	1765
MhlI	GDGCHC	4 cut(s)	125, 225, 1268, 1366
MlyI	GAGTC	5 cut(s)	152, 221, 241, 808, 828
Mph1103I	ATGCAT	1 cut(s)	1750
MroXI	GAANNNNTTC	1 cut(s)	1308
MseI	TTAA	5 cut(s)	300, 633, 1794, 1973, 2059
MslI	CAYNNNNRTG	3 cut(s)	1281, 1338, 1369
MspA1I	CMGCKG	1 cut(s)	1955
MspI	CCGG	3 cut(s)	797, 828, 1359
MspR9I	CCNGG	6 cut(s)	189, 620, 1359, 1572, 1649, 1775
MunI	CAATTG	3 cut(s)	109, 202, 1180
MvaI	CCWGG	5 cut(s)	189, 620, 1572, 1649, 1775
MvnI	CGCG	1 cut(s)	841
MwoI	GCNNNNNNNGC	1 cut(s)	1829
NciI	CCSGG	1 cut(s)	1359
NcoI	CCATGG	2 cut(s)	61, 1370
NdeII	GATC	8 cut(s)	169, 427, 1330, 1437, 1582, 1704, 1765, 1809
NlaIV	GGNNCC	3 cut(s)	123, 469, 1767
NmuCI	GTSAC	5 cut(s)	550, 1274, 1448, 1537, 2008
NsiI	ATGCAT	1 cut(s)	1750
NspI	RCATGY	2 cut(s)	1748, 2032
OliI	CACNNNNGTG	1 cut(s)	1281
PaeR7I	CTCGAG	1 cut(s)	816
PasI	CCCWGGG	1 cut(s)	1774
PceI	AGGCCT	1 cut(s)	870
PciSI	GCTCTTC	1 cut(s)	39
PcsI	WCGNNNNNNNCGW	1 cut(s)	1279
PdmI	GAANNNNTTC	1 cut(s)	1308
PfeI	GAWTC	7 cut(s)	281, 972, 1082, 1383, 1735, 1784, 2003
PflFI	GACNNNGTC	1 cut(s)	311
PkrI	GCNGC	2 cut(s)	31, 932
PleI	GAGTC	5 cut(s)	152, 220, 240, 808, 827
PpsI	GAGTC	5 cut(s)	152, 220, 240, 808, 827
PshAI	GACNNNNGTC	1 cut(s)	818
PsiI	TTATAA	1 cut(s)	1593
Psp6I	CCWGG	5 cut(s)	187, 618, 1570, 1647, 1773
PspEI	GGTNACC	1 cut(s)	182
PspGI	CCWGG	5 cut(s)	187, 618, 1570, 1647, 1773
PspN4I	GGNNCC	3 cut(s)	123, 469, 1767
PspOMI	GGGCCC	1 cut(s)	121
PspPI	GGNCC	8 cut(s)	121, 122, 639, 782, 825, 950, 1645, 1982
PspXI	VCTCGAGB	1 cut(s)	816
PstNI	CAGNNNCTG	5 cut(s)	215, 1157, 1204, 1843, 2006
PsuI	RGATCY	1 cut(s)	1765
PsyI	GACNNNGTC	1 cut(s)	311
PvuII	CAGCTG	1 cut(s)	1955
RsaI	GTAC	3 cut(s)	84, 469, 692
RsaNI	GTAC	3 cut(s)	83, 468, 691
RseI	CAYNNNNRTG	3 cut(s)	1281, 1338, 1369
SapI	GCTCTTC	1 cut(s)	39
SaqAI	TTAA	5 cut(s)	300, 633, 1794, 1973, 2059
SatI	GCNGC	2 cut(s)	30, 931
Sau3AI	GATC	8 cut(s)	169, 427, 1330, 1437, 1582, 1704, 1765, 1809
Sau96I	GGNCC	8 cut(s)	121, 122, 639, 782, 825, 950, 1645, 1982
SchI	GAGTC	5 cut(s)	152, 221, 241, 808, 828
ScrFI	CCNGG	6 cut(s)	189, 620, 1359, 1572, 1649, 1775
SduI	GDGCHC	4 cut(s)	125, 225, 1268, 1366
SfaNI	GCATC	2 cut(s)	974, 1702
SfcI	CTRYAG	2 cut(s)	891, 1630
Sfr274I	CTCGAG	1 cut(s)	816
SinI	GGWCC	5 cut(s)	639, 825, 950, 1645, 1982
SlaI	CTCGAG	1 cut(s)	816
SmiMI	CAYNNNNRTG	3 cut(s)	1281, 1338, 1369
SmlI	CTYRAG	1 cut(s)	816
SmoI	CTYRAG	1 cut(s)	816
SseBI	AGGCCT	1 cut(s)	870
SsiI	CCGC	3 cut(s)	165, 931, 1823
SspI	AATATT	2 cut(s)	176, 777
SspMI	CTAG	1 cut(s)	1760
StuI	AGGCCT	1 cut(s)	870
StyD4I	CCNGG	6 cut(s)	187, 618, 1357, 1570, 1647, 1773
StyI	CCWWGG	2 cut(s)	61, 1370
TaaI	ACNGT	3 cut(s)	344, 556, 1448
TaiI	ACGT	2 cut(s)	312, 1455
TaqI	TCGA	6 cut(s)	817, 943, 970, 1080, 1381, 1696
TaqII	GACCGA	1 cut(s)	305
TauI	GCSGC	1 cut(s)	933
TfiI	GAWTC	7 cut(s)	281, 972, 1082, 1383, 1735, 1784, 2003
Tru1I	TTAA	5 cut(s)	300, 633, 1794, 1973, 2059
Tru9I	TTAA	5 cut(s)	300, 633, 1794, 1973, 2059
TscAI	CASTG	5 cut(s)	1033, 1371, 1824, 1844, 2059
TseFI	GTSAC	5 cut(s)	550, 1274, 1448, 1537, 2008
TseI	GCWGC	1 cut(s)	29
Tsp45I	GTSAC	5 cut(s)	550, 1274, 1448, 1537, 2008
TspGWI	ACGGA	2 cut(s)	1127, 1547
TspRI	CASTG	5 cut(s)	1033, 1371, 1824, 1844, 2059
Tth111I	GACNNNGTC	1 cut(s)	311
VneI	GTGCAC	2 cut(s)	1264, 1362
VpaK11BI	GGWCC	5 cut(s)	639, 825, 950, 1645, 1982
XceI	RCATGY	2 cut(s)	1748, 2032
XcmI	CCANNNNNNNNNTGG	1 cut(s)	451
XhoI	CTCGAG	1 cut(s)	816
XmiI	GTMKAC	1 cut(s)	1299
XmnI	GAANNNNTTC	1 cut(s)	1308
XspI	CTAG	1 cut(s)	1760
ZraI	GACGTC	1 cut(s)	310
Zsp2I	ATGCAT	1 cut(s)	1750

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.