RLG00000004873

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
63254597 .. 63256814
2218 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004873

Sequence Viewer

Length: 1557 bp
ATGCTTACATATTCTATTACATGTGCAAGCAATTCCACACTTCATTCTTTTGCTACTATTCACAAAGAGGTATTGCAGTACATGAACCAAACATTGTTAGACTCATGCAAGTCTTCGGTTGTTTTACCTTTGGATTATCATGAGGCTGGTGGTGTGAATGCCTGGTTGAAAATGAATTATACTGAAATCTTGAAGATGGGGTTCGTTTTGAATTGGACTGCACAAAATTGCAGCAATTGTGAGATGAGCGGTGGGCGCTGTGGATTCGATGATAATGAATTTGTCTGTTTTTGCAGTGATAGACCTCATGAAAAAACCTGTGATGATGGCTCTAAGTTCAACTGGAAATGGAAGGTTGTCGTAGGTCTTTGCTCGGTTATTGGAACTATAGCTGTAATGTGCTTCATTTTCTTTATATGGCGACGCCGCAACAGAAATCGATATGGTCCATCATCCTATGCATCTCGAAGCATCTATTCTAAAAGCTATTCCAGAAGTGATACTGAGAAGGGAAGTGCATACCTTGGAGTTCATGTCTTCACCTACAAGGAACTTGAACAAGCAACAAACTATTTCGACTCATCAAAAGAAATTGGTGATGGAGGCTTTGGCACAGTGTACTATGGAAAAGTTCGTGATGGGCGATCAGTTGCTGTCAAGCGTCTTTATGAAACCAATTACAAGAGAGTTGAGCAGTTCATGAATGAAATTGACATTTTAGCTCGCCTACGCCACCAAAACCTTGTGTTACTCTATGGATGCACCTCTCGTCACAGCCGTGAACTCCTCCTTGTATATGAATATGTTCCTAATGGAACTCTTGCTGATCATCTTCACGGTGGAAAAGCAAAACCCGGTGCACTGCCATGGCATACTCGAATCAACATTGCCATAGAAACTGCAAGTGCATTGTCCTATCTTCATGCGTCTGAGATCATCCACCGTGATGTGAAAACCACTAACATTCTCCTTGACAACAATTTCTGTGTCAAAGTAGCAGATTTTGGACTATCTCGTCTCTTCCCCACGGATGTCACCCATATATCAACTGCTCCACAAGGAACTCCAGGTTATGTCGATCCTGATTATAACCAATGCTACCAGCTTACTACAAAGAGTGATGTTTATAGCTTCGGTGTGGTCCTGGTTGAACTCATATCATCCTTGCCTGCTGTTGATATCACAAGGCATCGACAGGAGATCAATTTGTCAAACATGGCTATCAACAAGATTCAGAAACATGCATTGCATGAGCTAGTGGATCCATCTCTGGGGTATGAATTAGACTTTAAAGTAAGAAAAATGATCAATGCAGTGGCAGAATTAGCGTTTCGGTGCCTGCAAAATGAGACTGACATGAGACCTTCTATGGTTGATGTGGAAAATGAACTAAAGAGGATACAGAGTGATGATTTTACCAAAGAGAAGGCAGAGGAAATTGATATTTCAGCTGATGATGTTGTGGTGCTAAAGAGTGGTCCTCTGCCACCTTCACCAGATTCTGTGACAATAAATTGGGTTAGCAAGTCTTCAACACCAAATGATAGCACTAGTTAA

Protein Analysis

519

Amino Acids

58.45

Weight (kDa)

6.36

Isoelectric Point (pI)

40.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WAK_assoc PF14380 8 - 101 1.6e-16 Wall-associated receptor kinase C-terminal
Pkinase PF00069 193 - 460 3.3e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 195 - 464 5.6e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1089
AasI GACNNNNNNGTC 1 cut(s) 1014
AccB1I GGYRCC 1 cut(s) 1335
AccBSI CCGCTC 1 cut(s) 249
AciI CCGC 2 cut(s) 249, 427
AclWI GGATC 3 cut(s) 1073, 1256, 1269
AcsI RAATTY 1 cut(s) 278
AcyI GRCGYC 1 cut(s) 424
AfaI GTAC 2 cut(s) 80, 620
AfiI CCNNNNNNNGG 1 cut(s) 1271
AflIII ACRYGT 1 cut(s) 20
AgsI TTSAA 7 cut(s) 169, 193, 211, 340, 557, 1151, 1533
AhlI ACTAGT 1 cut(s) 1550
AjnI CCWGG 3 cut(s) 161, 1066, 1143
AleI CACNNNNGTG 1 cut(s) 777
AluBI AGCT 7 cut(s) 392, 486, 722, 1105, 1131, 1255, 1451
AluI AGCT 7 cut(s) 392, 486, 722, 1105, 1131, 1255, 1451
Alw21I GWGCWC 1 cut(s) 862
Alw26I GTCTC 3 cut(s) 1022, 1343, 1354
Alw44I GTGCAC 1 cut(s) 858
AlwI GGATC 3 cut(s) 1073, 1256, 1269
AlwNI CAGNNNCTG 2 cut(s) 653, 1502
ApaLI GTGCAC 1 cut(s) 858
ApeKI GCWGC 1 cut(s) 231
ApoI RAATTY 1 cut(s) 278
Asp700I GAANNNNTTC 1 cut(s) 804
AspLEI GCGC 1 cut(s) 258
AspS9I GGNCC 3 cut(s) 446, 1141, 1478
AsuC2I CCSGG 1 cut(s) 855
AsuHPI GGTGA 4 cut(s) 532, 608, 1027, 1485
AvaII GGWCC 3 cut(s) 446, 1141, 1478
BaeGI GKGCMC 1 cut(s) 862
BamHI GGATCC 1 cut(s) 1261
BanI GGYRCC 1 cut(s) 1335
BbsI GAAGAC 3 cut(s) 105, 529, 1521
Bbv12I GWGCWC 1 cut(s) 862
BbvI GCAGC 1 cut(s) 243
BccI CCATC 6 cut(s) 190, 320, 457, 593, 632, 1273
BceAI ACGGC 1 cut(s) 762
BciT130I CCWGG 3 cut(s) 163, 1068, 1145
BciVI GTATCC 1 cut(s) 1392
BclI TGATCA 2 cut(s) 826, 1305
BcnI CCSGG 1 cut(s) 855
BcoDI GTCTC 3 cut(s) 1022, 1343, 1354
BcuI ACTAGT 1 cut(s) 1550
BfaI CTAG 2 cut(s) 1256, 1551
BfmI CTRYAG 1 cut(s) 387
BfoI RGCGCY 1 cut(s) 259
BfuI GTATCC 1 cut(s) 1392
BisI GCNGC 2 cut(s) 232, 427
BlsI GCNGC 2 cut(s) 233, 428
Bme1390I CCNGG 4 cut(s) 163, 855, 1068, 1145
Bme18I GGWCC 3 cut(s) 446, 1141, 1478
BmgT120I GGNCC 3 cut(s) 446, 1141, 1478
BmiI GGNNCC 2 cut(s) 1263, 1337
BmrFI CCNGG 4 cut(s) 163, 855, 1068, 1145
BmsI GCATC 4 cut(s) 470, 480, 749, 1198
BpiI GAAGAC 3 cut(s) 105, 529, 1521
BplI GAGNNNNNCTC 2 cut(s) 1465, 1497
BpmI CTGGAG 1 cut(s) 1050
BpuMI CCSGG 1 cut(s) 855
Bsa29I ATCGAT 1 cut(s) 439
BsaHI GRCGYC 1 cut(s) 424
BsaI GGTCTC 1 cut(s) 1354
BsaJI CCNNGG 3 cut(s) 523, 866, 1026
BsaXI ACNNNNNCTCC 2 cut(s) 519, 549
Bsc4I CCNNNNNNNGG 1 cut(s) 1271
Bse1I ACTGG 1 cut(s) 347
Bse3DI GCAATG 2 cut(s) 885, 1244
BseBI CCWGG 3 cut(s) 163, 1068, 1145
BseCI ATCGAT 1 cut(s) 439
BseDI CCNNGG 3 cut(s) 523, 866, 1026
BseGI GGATG 5 cut(s) 452, 764, 936, 1036, 1160
BseLI CCNNNNNNNGG 1 cut(s) 1271
BseMI GCAATG 2 cut(s) 885, 1244
BseMII CTCAG 2 cut(s) 495, 921
BseNI ACTGG 1 cut(s) 347
BseRI GAGGAG 1 cut(s) 776
BseSI GKGCMC 1 cut(s) 862
BseXI GCAGC 1 cut(s) 243
BsgI GTGCAG 1 cut(s) 204
BshNI GGYRCC 1 cut(s) 1335
BshVI ATCGAT 1 cut(s) 439
BsiHKAI GWGCWC 1 cut(s) 862
BsiSI CCGG 1 cut(s) 855
BslI CCNNNNNNNGG 1 cut(s) 1271
BsmAI GTCTC 3 cut(s) 1022, 1343, 1354
BsmBI CGTCTC 1 cut(s) 1022
BsmI GAATGC 1 cut(s) 163
Bso31I GGTCTC 1 cut(s) 1354
Bsp1286I GDGCHC 1 cut(s) 862
Bsp143I GATC 7 cut(s) 644, 826, 933, 1078, 1200, 1261, 1305
Bsp19I CCATGG 1 cut(s) 866
BspACI CCGC 2 cut(s) 249, 427
BspCNI CTCAG 2 cut(s) 496, 922
BspDI ATCGAT 1 cut(s) 439
BspHI TCATGA 3 cut(s) 139, 307, 699
BspLI GGNNCC 2 cut(s) 1263, 1337
BspPI GGATC 3 cut(s) 1073, 1256, 1269
BspT107I GGYRCC 1 cut(s) 1335
BspTNI GGTCTC 1 cut(s) 1354
BsrBI CCGCTC 1 cut(s) 249
BsrDI GCAATG 2 cut(s) 885, 1244
BsrI ACTGG 1 cut(s) 347
BssECI CCNNGG 3 cut(s) 523, 866, 1026
BssMI GATC 7 cut(s) 644, 826, 933, 1078, 1200, 1261, 1305
BssNI GRCGYC 1 cut(s) 424
BssT1I CCWWGG 2 cut(s) 523, 866
Bst2UI CCWGG 3 cut(s) 163, 1068, 1145
Bst4CI ACNGT 3 cut(s) 616, 839, 944
Bst6I CTCTTC 1 cut(s) 1025
BstACI GRCGYC 1 cut(s) 424
BstC8I GCNNGC 4 cut(s) 28, 724, 1170, 1340
BstDEI CTNAG 3 cut(s) 333, 504, 930
BstDSI CCRYGG 2 cut(s) 866, 1026
BstF5I GGATG 5 cut(s) 452, 764, 936, 1036, 1160
BstH2I RGCGCY 1 cut(s) 259
BstHHI GCGC 1 cut(s) 258
BstKTI GATC 7 cut(s) 647, 829, 936, 1081, 1203, 1264, 1308
BstMAI GTCTC 3 cut(s) 1022, 1343, 1354
BstMBI GATC 7 cut(s) 644, 826, 933, 1078, 1200, 1261, 1305
BstMWI GCNNNNNNNGC 2 cut(s) 255, 1325
BstNI CCWGG 3 cut(s) 163, 1068, 1145
BstNSI RCATGY 2 cut(s) 24, 1244
BstSCI CCNGG 4 cut(s) 161, 853, 1066, 1143
BstSFI CTRYAG 1 cut(s) 387
BstSLI GKGCMC 1 cut(s) 862
BstV1I GCAGC 1 cut(s) 243
BstV2I GAAGAC 3 cut(s) 105, 529, 1521
BstX2I RGATCY 1 cut(s) 1261
BstYI RGATCY 1 cut(s) 1261
Bsu15I ATCGAT 1 cut(s) 439
BsuI GTATCC 1 cut(s) 1392
BsuTUI ATCGAT 1 cut(s) 439
BtgI CCRYGG 2 cut(s) 866, 1026
BtsCI GGATG 5 cut(s) 452, 764, 936, 1036, 1160
BtsI GCAGTG 3 cut(s) 301, 860, 1320
BtsIMutI CAGTG 4 cut(s) 301, 621, 860, 1320
Cac8I GCNNGC 4 cut(s) 28, 724, 1170, 1340
CaiI CAGNNNCTG 2 cut(s) 653, 1502
CciI TCATGA 3 cut(s) 139, 307, 699
CfoI GCGC 1 cut(s) 258
Cfr13I GGNCC 3 cut(s) 446, 1141, 1478
ClaI ATCGAT 1 cut(s) 439
CseI GACGC 3 cut(s) 432, 650, 915
Csp6I GTAC 2 cut(s) 79, 619
CviQI GTAC 2 cut(s) 79, 619
DdeI CTNAG 3 cut(s) 333, 504, 930
DpnI GATC 7 cut(s) 646, 828, 935, 1080, 1202, 1263, 1307
DpnII GATC 7 cut(s) 644, 826, 933, 1078, 1200, 1261, 1305
DraI TTTAAA 1 cut(s) 1291
DrdI GACNNNNNNGTC 1 cut(s) 1014
DseDI GACNNNNNNGTC 1 cut(s) 1014
Eam1104I CTCTTC 1 cut(s) 1025
EarI CTCTTC 1 cut(s) 1025
Eco130I CCWWGG 2 cut(s) 523, 866
Eco31I GGTCTC 1 cut(s) 1354
Eco32I GATATC 1 cut(s) 1180
Eco47I GGWCC 3 cut(s) 446, 1141, 1478
EcoRII CCWGG 3 cut(s) 161, 1066, 1143
EcoRV GATATC 1 cut(s) 1180
EcoT14I CCWWGG 2 cut(s) 523, 866
EcoT22I ATGCAT 2 cut(s) 463, 1246
ErhI CCWWGG 2 cut(s) 523, 866
Esp3I CGTCTC 1 cut(s) 1022
FbaI TGATCA 2 cut(s) 826, 1305
Fnu4HI GCNGC 2 cut(s) 232, 427
FokI GGATG 5 cut(s) 439, 771, 923, 1043, 1147
Fsp4HI GCNGC 2 cut(s) 232, 427
FspBI CTAG 2 cut(s) 1256, 1551
GlaI GCGC 1 cut(s) 257
GluI GCNGC 2 cut(s) 232, 427
GsuI CTGGAG 1 cut(s) 1050
HaeII RGCGCY 1 cut(s) 259
HapII CCGG 1 cut(s) 855
HgaI GACGC 3 cut(s) 432, 650, 915
HhaI GCGC 1 cut(s) 258
Hin1I GRCGYC 1 cut(s) 424
Hin6I GCGC 1 cut(s) 256
HinP1I GCGC 1 cut(s) 256
HinfI GANTC 6 cut(s) 101, 264, 578, 879, 1231, 1499
HpaII CCGG 1 cut(s) 855
HphI GGTGA 4 cut(s) 532, 608, 1027, 1485
Hpy166II GTNNAC 3 cut(s) 619, 782, 860
Hpy188I TCNGA 2 cut(s) 931, 1236
Hpy188III TCNNGA 8 cut(s) 140, 190, 308, 465, 492, 635, 700, 1082
Hpy8I GTNNAC 3 cut(s) 619, 782, 860
Hpy99I CGWCG 1 cut(s) 426
HpyAV CCTTC 5 cut(s) 346, 502, 1374, 1420, 1500
HpyCH4III ACNGT 3 cut(s) 616, 839, 944
HpyF10VI GCNNNNNNNGC 2 cut(s) 255, 1325
HpyF3I CTNAG 3 cut(s) 333, 504, 930
Hsp92I GRCGYC 1 cut(s) 424
HspAI GCGC 1 cut(s) 256
Ksp22I TGATCA 2 cut(s) 826, 1305
Kzo9I GATC 7 cut(s) 644, 826, 933, 1078, 1200, 1261, 1305
LmnI GCTCC 1 cut(s) 1057
Lsp1109I GCAGC 1 cut(s) 243
LweI GCATC 4 cut(s) 470, 480, 749, 1198
MaeI CTAG 2 cut(s) 1256, 1551
MaeIII GTNAC 4 cut(s) 747, 770, 1033, 1504
MalI GATC 7 cut(s) 646, 828, 935, 1080, 1202, 1263, 1307
MbiI CCGCTC 1 cut(s) 249
MboI GATC 7 cut(s) 644, 826, 933, 1078, 1200, 1261, 1305
MboII GAAGA 7 cut(s) 105, 205, 529, 824, 911, 1012, 1521
MfeI CAATTG 1 cut(s) 235
MflI RGATCY 1 cut(s) 1261
MhlI GDGCHC 1 cut(s) 862
MlyI GAGTC 2 cut(s) 95, 572
MnlI CCTC 9 cut(s) 61, 136, 315, 596, 775, 797, 1389, 1426, 1491
Mph1103I ATGCAT 2 cut(s) 463, 1246
MroXI GAANNNNTTC 1 cut(s) 804
MseI TTAA 2 cut(s) 1290, 1555
MslI CAYNNNNRTG 3 cut(s) 777, 865, 945
MspA1I CMGCKG 1 cut(s) 1451
MspI CCGG 1 cut(s) 855
MspR9I CCNGG 4 cut(s) 163, 855, 1068, 1145
MunI CAATTG 1 cut(s) 235
Mva1269I GAATGC 1 cut(s) 163
MvaI CCWGG 3 cut(s) 163, 1068, 1145
MwoI GCNNNNNNNGC 2 cut(s) 255, 1325
NciI CCSGG 1 cut(s) 855
NcoI CCATGG 1 cut(s) 866
NdeII GATC 7 cut(s) 644, 826, 933, 1078, 1200, 1261, 1305
NlaIV GGNNCC 2 cut(s) 1263, 1337
NmuCI GTSAC 3 cut(s) 770, 1033, 1504
NsiI ATGCAT 2 cut(s) 463, 1246
NspI RCATGY 2 cut(s) 24, 1244
OliI CACNNNNGTG 1 cut(s) 777
PagI TCATGA 3 cut(s) 139, 307, 699
PciI ACATGT 1 cut(s) 20
PcsI WCGNNNNNNNCGW 2 cut(s) 640, 775
PctI GAATGC 1 cut(s) 163
PdmI GAANNNNTTC 1 cut(s) 804
PfeI GAWTC 4 cut(s) 264, 879, 1231, 1499
PkrI GCNGC 2 cut(s) 233, 428
PleI GAGTC 2 cut(s) 95, 572
PpsI GAGTC 2 cut(s) 95, 572
PscI ACATGT 1 cut(s) 20
PsiI TTATAA 1 cut(s) 1089
Psp6I CCWGG 3 cut(s) 161, 1066, 1143
PspGI CCWGG 3 cut(s) 161, 1066, 1143
PspN4I GGNNCC 2 cut(s) 1263, 1337
PspPI GGNCC 3 cut(s) 446, 1141, 1478
PstNI CAGNNNCTG 2 cut(s) 653, 1502
PsuI RGATCY 1 cut(s) 1261
PvuII CAGCTG 1 cut(s) 1451
RsaI GTAC 2 cut(s) 80, 620
RsaNI GTAC 2 cut(s) 79, 619
RseI CAYNNNNRTG 3 cut(s) 777, 865, 945
SaqAI TTAA 2 cut(s) 1290, 1555
SatI GCNGC 2 cut(s) 232, 427
Sau3AI GATC 7 cut(s) 644, 826, 933, 1078, 1200, 1261, 1305
Sau96I GGNCC 3 cut(s) 446, 1141, 1478
SchI GAGTC 2 cut(s) 95, 572
ScrFI CCNGG 4 cut(s) 163, 855, 1068, 1145
SduI GDGCHC 1 cut(s) 862
SfaNI GCATC 4 cut(s) 470, 480, 749, 1198
SfcI CTRYAG 1 cut(s) 387
SinI GGWCC 3 cut(s) 446, 1141, 1478
SmiMI CAYNNNNRTG 3 cut(s) 777, 865, 945
SpeI ACTAGT 1 cut(s) 1550
SsiI CCGC 2 cut(s) 249, 427
SspMI CTAG 2 cut(s) 1256, 1551
StyD4I CCNGG 4 cut(s) 161, 853, 1066, 1143
StyI CCWWGG 2 cut(s) 523, 866
TaaI ACNGT 3 cut(s) 616, 839, 944
TaqI TCGA 7 cut(s) 267, 439, 466, 576, 877, 1077, 1192
TatI WGTACW 2 cut(s) 78, 618
TauI GCSGC 1 cut(s) 429
TfiI GAWTC 4 cut(s) 264, 879, 1231, 1499
Tru1I TTAA 2 cut(s) 1290, 1555
Tru9I TTAA 2 cut(s) 1290, 1555
TscAI CASTG 4 cut(s) 301, 621, 867, 1320
TseFI GTSAC 3 cut(s) 770, 1033, 1504
TseI GCWGC 1 cut(s) 231
Tsp45I GTSAC 3 cut(s) 770, 1033, 1504
TspGWI ACGGA 1 cut(s) 1043
TspRI CASTG 4 cut(s) 301, 621, 867, 1320
VneI GTGCAC 1 cut(s) 858
VpaK11BI GGWCC 3 cut(s) 446, 1141, 1478
XapI RAATTY 1 cut(s) 278
XceI RCATGY 2 cut(s) 24, 1244
XmnI GAANNNNTTC 1 cut(s) 804
XspI CTAG 2 cut(s) 1256, 1551
Zsp2I ATGCAT 2 cut(s) 463, 1246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.