Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000786

Physical Location & Seq

Genomic Coordinates Reverse (-)

6026964 .. 6029632

Gene Structure 2669 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ16604

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGAATCCCTTCCATTTATGTGTTTTTAGTATCATCTTCACAACCATAGTCAGTCTAGCCTTTTCTGTAGACTCTAGCTACTATGAGGCTTGCAAGCCTCAAACATGTGGGAATGGTCCGAATATAAGCTACCCTTTTTGGCTTTCGGATCAACAAGAATCCTATTGTGGCTATCCTAGTTTCAAGCTCGCTTGCAAGGACAAAAATCCAACACTTACTATTTCTGATGATGATTATATCATCAAAGAAATCTTTTACTCAAACCATTCATTTCTCGTGGACAATGGTGCTGTTTATGAAGATGAATGTCCCCTTCCTCTACACAGCTTCAGGCTCGATCGAACACCTTTCAATTATAGTTCCAATCATGTTGATTTTTCCTTGTTCTACAACTGTTCCCAAGAACCTGTGAACAACATGCTTACATATTCTATTACATGTGAAAGCAATTCCACACTTCATTCTTTTGCTACCATTCACAAAGAGGTACTGCAGTACATGAACCGAACATTATTAGACTCGTGCGAGTCTTCGGTTGTTTTACCTTTGGATTATCATGAGGCTGGTGGTGTGAATACCTGGTTGGAAATGAATTATACTGAAATCTTGAAGATGGGGTTCGTTTTGAATTGGACTGCACAAAATTGCAGCAATTGTGAGACGAGCGGTGGGCGCTGTGGATTCGATAACAATGAATTTGTCTGTTTTTGCAGTGATAGACCTCATGAAAAAACCTGTGATGATGGCTCTAAGTTCGACTGGAAATGGAAGGTTGTCGTAGGGATTTGCTCGGTTATTGGAACTATAGCTGTAATGTGCGTCATTTTCTTTATATGGCGACGTCGCAACAGAAATCGATATGGTCCATCATCCTACGCATCTCGAAGCATCTATTCTAAAAGCTATTCCAGAAGTGATACTGAGAAGGGAAGTGCATACCTTGGAGTTCATGTCTTCACCTACAAGGAACTTGAACAAGCAACAAACTATTTCGACTCATCAAAAGAAATTGGGGATGGAGGCTTTGGCACAGTGTACTATGGAAAAGTTCGTGATGGGCGATCAGTTGCTGTCAAGCGTCTTTACGAAACCAATTACAAGAGAGTTGAGCAGTTCATGAATGAAATCGAGATTTTAGCTCGCCTACGCCACCAAAACCTTGTCTTACTCTATGGATGCACCTCTCGTCACAGCCGTGAACTCCTCCTTGTCTATGAATATGTTCCCAATGGAACTCTTGCTGATCATCTTCACGGTGGAAAAGCAAAACCCGGTGCACTGCCATGGCATACTCGAATCAACATTGCCGTAGAAACTGCAAGTGGATTGTCCTATCTTCATGCGTCTGAGATCATCCACCGCGATGTGAAAACCACTAACATTCTCCTTGACAACAATTTCTGTGTCAAAGTAGCAGATTTTGGACTGTCTCGTCTCTTCCCCACGGATGTCACCCATATCTCAACTGCTCCACAAGGAACTCCGGGTTATGTTGATCCCGATTATAACCAATGCTACCAGCTTACTGCGAAGAGTGATGTCTATAGCTTCGGTGTGGTCCTGGTTGAACTCATATCATCCTTGCCTGCTGTTGATATCACAAGGCATCGACATGAGATCAATTTGTCGAACATGGCTATCAACAAAATTCAGAAACATGCATTGCATGAGCTAGTGGATCCATCCCTTGGGTATGAATCAGACTTTAAAGTAAGAAAAATGATCAATGCAGTGGCGGAATTAGCGTTTCAGTGCCTGCAAAGTGAGACTGAAATGAGACCTTCTATGGTTGATGTGGAAAATGAACTAAAGAGGATACAGAGTGATGATTTTAGTAAAGAAAAGGCAGAGGAAATTGATATTTCAGCTGATGATGTTGTGCCGTTAAAGAGTGGTCCTCTGCCACCTTCACCAGATTCTGTGACAATTAATTGGGTTAGCAAGTCTTCAACACCAAATGATAGCACTGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010228 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023052 GO:0031668 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0036211 GO:0042221 GO:0042631 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0104004 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

657

Amino Acids

74.27

Weight (kDa)

5.57

Isoelectric Point (pI)

41.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	31 - 93	7.1e-18	Wall-associated receptor kinase galacturonan-binding
WAK_assoc	PF14380	147 - 240	1.1e-16	Wall-associated receptor kinase C-terminal
Pkinase	PF00069	332 - 599	1.1e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	334 - 603	2.2e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18390 AT1G18390
fragaria_vesca	FvH4_5g11760 FvH4_5g11760 FvH4_5g11790
malus_domestica	MD06G1218900.v1.1 MD06G1219200.v1.1 MD14G1228700.v1.1
prunus_persica	Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1
pyrus_communis	pycom06g19560 pycom06g19580 pycom14g19000
rosa_chinensis	RchiOBHm_Chr7g0185891 RchiOBHm_Chr7g0185941 RchiOBHm_Chr7g0185971 RchiOBHm_Chr7g0186001 RchiOBHm_Chr7g0186021 RchiOBHm_Chr7g0209991 RchiOBHm_Chr7g0210001
rosa_laevigata	RLG00000003071 RLG00000004872 RLG00000004873 RLG00000004875 RLG00000005413
rosa_multiflora	Rmu_co8007212.1_g000001 Rmu_co8076798.1_g000001 Rmu_sc0000194.1_g000013 Rmu_sc0000194.1_g000017 Rmu_sc0000194.1_g000019 Rmu_sc0004509.1_g000017 Rmu_sc0004509.1_g000018 Rmu_sc0005665.1_g000002 Rmu_sc0005665.1_g000004 Rmu_sc0005665.1_g000020 Rmu_sc0005665.1_g000023 Rmu_sc0005665.1_g000035
rosa_roxburghii	Rroxscaffold_1G00039510 Rroxscaffold_3G00248670 Rroxscaffold_3G00257880 Rroxscaffold_3G00268500 Rroxscaffold_3G00268510 Rroxscaffold_3G00268530 Rroxscaffold_3G00268580
rosa_rugosa	Rorug06G0471800 Rorug07G0117900
rosa_samantha	Rh1BG104700 Rh4CG290300 Rh7AG070300 Rh7AG070400 Rh7AG070600 Rh7AG251700 Rh7BG086300 Rh7BG086400 Rh7BG246300 Rh7CG077400 Rh7CG077800 Rh7CG078000 Rh7CG268500 Rh7DG077400 Rh7DG077600 Rh7DG077900 Rh7DG078000 Rh7DG258500
rosa_wichuraiana	Rw7G006440 Rw7G006470 Rw7G006480 Rw7G021370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1506
AasI	GACNNNNNNGTC	1 cut(s)	1431
AatII	GACGTC	1 cut(s)	844
AccB7I	CCANNNNNTGG	1 cut(s)	1688
AccBSI	CCGCTC	1 cut(s)	666
AccI	GTMKAC	1 cut(s)	69
AccII	CGCG	1 cut(s)	1362
AciI	CCGC	3 cut(s)	666, 1360, 1736
AclWI	GGATC	4 cut(s)	156, 1490, 1673, 1686
AcsI	RAATTY	2 cut(s)	695, 1647
AcuI	CTGAAG	1 cut(s)	313
AcyI	GRCGYC	1 cut(s)	841
AfaI	GTAC	3 cut(s)	489, 497, 1037
AfiI	CCNNNNNNNGG	1 cut(s)	1688
AflIII	ACRYGT	2 cut(s)	104, 437
AgsI	TTSAA	7 cut(s)	184, 352, 610, 628, 974, 1568, 1950
AjnI	CCWGG	2 cut(s)	578, 1560
AjuI	GAANNNNNNNTTGG	2 cut(s)	566, 598
AleI	CACNNNNGTG	1 cut(s)	1194
Alw21I	GWGCWC	1 cut(s)	1279
Alw26I	GTCTC	5 cut(s)	653, 1434, 1439, 1760, 1771
Alw44I	GTGCAC	1 cut(s)	1275
AlwI	GGATC	4 cut(s)	156, 1490, 1673, 1686
AlwNI	CAGNNNCTG	3 cut(s)	1070, 1756, 1919
ApaLI	GTGCAC	1 cut(s)	1275
ApeKI	GCWGC	1 cut(s)	648
ApoI	RAATTY	2 cut(s)	695, 1647
AseI	ATTAAT	1 cut(s)	1929
Asp700I	GAANNNNTTC	2 cut(s)	8, 1221
AspLEI	GCGC	1 cut(s)	675
AspS9I	GGNCC	4 cut(s)	116, 863, 1558, 1895
AsuC2I	CCSGG	2 cut(s)	1272, 1485
AsuHPI	GGTGA	3 cut(s)	949, 1444, 1902
AvaII	GGWCC	4 cut(s)	116, 863, 1558, 1895
BaeGI	GKGCMC	1 cut(s)	1279
BaeI	ACNNNNGTAYC	2 cut(s)	479, 512
BamHI	GGATCC	1 cut(s)	1678
BauI	CACGAG	2 cut(s)	275, 520
BbsI	GAAGAC	3 cut(s)	522, 946, 1938
Bbv12I	GWGCWC	1 cut(s)	1279
BbvI	GCAGC	1 cut(s)	660
BccI	CCATC	6 cut(s)	607, 737, 874, 1010, 1049, 1690
BceAI	ACGGC	3 cut(s)	1179, 1292, 1867
BciT130I	CCWGG	2 cut(s)	580, 1562
BciVI	GTATCC	1 cut(s)	1809
BclI	TGATCA	2 cut(s)	1243, 1722
BcnI	CCSGG	2 cut(s)	1272, 1485
BcoDI	GTCTC	5 cut(s)	653, 1434, 1439, 1760, 1771
BfaI	CTAG	4 cut(s)	56, 75, 177, 1673
BfmI	CTRYAG	4 cut(s)	66, 491, 804, 1543
BfoI	RGCGCY	1 cut(s)	676
BfuI	GTATCC	1 cut(s)	1809
BisI	GCNGC	1 cut(s)	649
BlsI	GCNGC	1 cut(s)	650
Bme1390I	CCNGG	4 cut(s)	580, 1272, 1485, 1562
Bme18I	GGWCC	4 cut(s)	116, 863, 1558, 1895
BmgT120I	GGNCC	4 cut(s)	116, 863, 1558, 1895
BmiI	GGNNCC	1 cut(s)	1680
BmrFI	CCNGG	4 cut(s)	580, 1272, 1485, 1562
BmsI	GCATC	4 cut(s)	887, 897, 1166, 1615
BpiI	GAAGAC	3 cut(s)	522, 946, 1938
BplI	GAGNNNNNCTC	2 cut(s)	1882, 1914
BpuMI	CCSGG	2 cut(s)	1272, 1485
Bsa29I	ATCGAT	1 cut(s)	856
BsaHI	GRCGYC	1 cut(s)	841
BsaI	GGTCTC	1 cut(s)	1771
BsaJI	CCNNGG	4 cut(s)	940, 1283, 1443, 1687
BsaXI	ACNNNNNCTCC	2 cut(s)	936, 966
Bsc4I	CCNNNNNNNGG	1 cut(s)	1688
Bse1I	ACTGG	2 cut(s)	764, 1972
Bse3DI	GCAATG	2 cut(s)	1302, 1661
BseBI	CCWGG	2 cut(s)	580, 1562
BseCI	ATCGAT	1 cut(s)	856
BseDI	CCNNGG	4 cut(s)	940, 1283, 1443, 1687
BseGI	GGATG	7 cut(s)	869, 1021, 1181, 1353, 1453, 1577, 1682
BseLI	CCNNNNNNNGG	1 cut(s)	1688
BseMI	GCAATG	2 cut(s)	1302, 1661
BseMII	CTCAG	2 cut(s)	912, 1338
BseNI	ACTGG	2 cut(s)	764, 1972
BseRI	GAGGAG	1 cut(s)	1193
BseSI	GKGCMC	1 cut(s)	1279
BseXI	GCAGC	1 cut(s)	660
BsgI	GTGCAG	1 cut(s)	621
Bsh1236I	CGCG	1 cut(s)	1362
Bsh1285I	CGRYCG	1 cut(s)	340
BshVI	ATCGAT	1 cut(s)	856
BsiEI	CGRYCG	1 cut(s)	340
BsiHKAI	GWGCWC	1 cut(s)	1279
BsiSI	CCGG	2 cut(s)	1272, 1484
BslFI	GGGAC	1 cut(s)	294
BslI	CCNNNNNNNGG	1 cut(s)	1688
BsmAI	GTCTC	5 cut(s)	653, 1434, 1439, 1760, 1771
BsmBI	CGTCTC	2 cut(s)	653, 1439
BsmFI	GGGAC	1 cut(s)	294
Bso31I	GGTCTC	1 cut(s)	1771
Bsp1286I	GDGCHC	1 cut(s)	1279
Bsp143I	GATC	9 cut(s)	148, 337, 1061, 1243, 1350, 1495, 1617, 1678, 1722
Bsp19I	CCATGG	1 cut(s)	1283
BspACI	CCGC	3 cut(s)	666, 1360, 1736
BspCNI	CTCAG	2 cut(s)	913, 1339
BspDI	ATCGAT	1 cut(s)	856
BspFNI	CGCG	1 cut(s)	1362
BspHI	TCATGA	3 cut(s)	556, 724, 1116
BspLI	GGNNCC	1 cut(s)	1680
BspMAI	CTGCAG	1 cut(s)	495
BspPI	GGATC	4 cut(s)	156, 1490, 1673, 1686
BspTNI	GGTCTC	1 cut(s)	1771
BsrBI	CCGCTC	1 cut(s)	666
BsrDI	GCAATG	2 cut(s)	1302, 1661
BsrI	ACTGG	2 cut(s)	764, 1972
BssECI	CCNNGG	4 cut(s)	940, 1283, 1443, 1687
BssMI	GATC	9 cut(s)	148, 337, 1061, 1243, 1350, 1495, 1617, 1678, 1722
BssNI	GRCGYC	1 cut(s)	841
BssSI	CACGAG	2 cut(s)	275, 520
BssT1I	CCWWGG	3 cut(s)	940, 1283, 1687
Bst2BI	CACGAG	2 cut(s)	275, 520
Bst2UI	CCWGG	2 cut(s)	580, 1562
Bst4CI	ACNGT	4 cut(s)	395, 1033, 1256, 1428
Bst6I	CTCTTC	2 cut(s)	1442, 1526
BstACI	GRCGYC	1 cut(s)	841
BstC8I	GCNNGC	7 cut(s)	91, 95, 189, 193, 1141, 1587, 1757
BstDEI	CTNAG	3 cut(s)	750, 921, 1347
BstDSI	CCRYGG	2 cut(s)	1283, 1443
BstF5I	GGATG	7 cut(s)	869, 1021, 1181, 1353, 1453, 1577, 1682
BstFNI	CGCG	1 cut(s)	1362
BstH2I	RGCGCY	1 cut(s)	676
BstHHI	GCGC	1 cut(s)	675
BstKTI	GATC	9 cut(s)	151, 340, 1064, 1246, 1353, 1498, 1620, 1681, 1725
BstMAI	GTCTC	5 cut(s)	653, 1434, 1439, 1760, 1771
BstMBI	GATC	9 cut(s)	148, 337, 1061, 1243, 1350, 1495, 1617, 1678, 1722
BstMCI	CGRYCG	1 cut(s)	340
BstMWI	GCNNNNNNNGC	2 cut(s)	672, 1742
BstNI	CCWGG	2 cut(s)	580, 1562
BstNSI	RCATGY	4 cut(s)	108, 421, 441, 1661
BstSCI	CCNGG	4 cut(s)	578, 1270, 1483, 1560
BstSFI	CTRYAG	4 cut(s)	66, 491, 804, 1543
BstSLI	GKGCMC	1 cut(s)	1279
BstUI	CGCG	1 cut(s)	1362
BstV1I	GCAGC	1 cut(s)	660
BstV2I	GAAGAC	3 cut(s)	522, 946, 1938
BstX2I	RGATCY	1 cut(s)	1678
BstYI	RGATCY	1 cut(s)	1678
Bsu15I	ATCGAT	1 cut(s)	856
BsuI	GTATCC	1 cut(s)	1809
BsuTUI	ATCGAT	1 cut(s)	856
BtgI	CCRYGG	2 cut(s)	1283, 1443
BtgZI	GCGATG	1 cut(s)	1377
BtsCI	GGATG	7 cut(s)	869, 1021, 1181, 1353, 1453, 1577, 1682
BtsI	GCAGTG	3 cut(s)	718, 1277, 1737
BtsIMutI	CAGTG	6 cut(s)	718, 1038, 1277, 1737, 1757, 1965
Cac8I	GCNNGC	7 cut(s)	91, 95, 189, 193, 1141, 1587, 1757
CaiI	CAGNNNCTG	3 cut(s)	1070, 1756, 1919
CciI	TCATGA	3 cut(s)	556, 724, 1116
CfoI	GCGC	1 cut(s)	675
Cfr13I	GGNCC	4 cut(s)	116, 863, 1558, 1895
ClaI	ATCGAT	1 cut(s)	856
CseI	GACGC	3 cut(s)	808, 1067, 1332
CsiI	ACCWGGT	1 cut(s)	578
Csp6I	GTAC	3 cut(s)	488, 496, 1036
CviQI	GTAC	3 cut(s)	488, 496, 1036
DdeI	CTNAG	3 cut(s)	750, 921, 1347
DpnI	GATC	9 cut(s)	150, 339, 1063, 1245, 1352, 1497, 1619, 1680, 1724
DpnII	GATC	9 cut(s)	148, 337, 1061, 1243, 1350, 1495, 1617, 1678, 1722
DraI	TTTAAA	1 cut(s)	1708
DrdI	GACNNNNNNGTC	1 cut(s)	1431
DseDI	GACNNNNNNGTC	1 cut(s)	1431
Eam1104I	CTCTTC	2 cut(s)	1442, 1526
EarI	CTCTTC	2 cut(s)	1442, 1526
EciI	GGCGGA	1 cut(s)	1751
Eco130I	CCWWGG	3 cut(s)	940, 1283, 1687
Eco31I	GGTCTC	1 cut(s)	1771
Eco32I	GATATC	1 cut(s)	1597
Eco47I	GGWCC	4 cut(s)	116, 863, 1558, 1895
Eco57I	CTGAAG	1 cut(s)	313
EcoRII	CCWGG	2 cut(s)	578, 1560
EcoRV	GATATC	1 cut(s)	1597
EcoT14I	CCWWGG	3 cut(s)	940, 1283, 1687
EcoT22I	ATGCAT	1 cut(s)	1663
ErhI	CCWWGG	3 cut(s)	940, 1283, 1687
Esp3I	CGTCTC	2 cut(s)	653, 1439
FalI	AAGNNNNNCTT	2 cut(s)	118, 150
FaqI	GGGAC	1 cut(s)	294
FbaI	TGATCA	2 cut(s)	1243, 1722
FblI	GTMKAC	1 cut(s)	69
Fnu4HI	GCNGC	1 cut(s)	649
FokI	GGATG	7 cut(s)	856, 1028, 1188, 1340, 1460, 1564, 1669
Fsp4HI	GCNGC	1 cut(s)	649
FspBI	CTAG	4 cut(s)	56, 75, 177, 1673
GlaI	GCGC	1 cut(s)	674
GluI	GCNGC	1 cut(s)	649
HaeII	RGCGCY	1 cut(s)	676
HapII	CCGG	2 cut(s)	1272, 1484
HgaI	GACGC	3 cut(s)	808, 1067, 1332
HhaI	GCGC	1 cut(s)	675
Hin1I	GRCGYC	1 cut(s)	841
Hin6I	GCGC	1 cut(s)	673
HinP1I	GCGC	1 cut(s)	673
HpaII	CCGG	2 cut(s)	1272, 1484
HphI	GGTGA	3 cut(s)	949, 1444, 1902
Hpy166II	GTNNAC	6 cut(s)	70, 280, 412, 1036, 1199, 1277
Hpy188I	TCNGA	6 cut(s)	120, 148, 226, 1348, 1653, 1702
Hpy188III	TCNNGA	9 cut(s)	557, 607, 725, 882, 909, 1052, 1117, 1129, 1499
Hpy8I	GTNNAC	6 cut(s)	70, 280, 412, 1036, 1199, 1277
Hpy99I	CGWCG	2 cut(s)	843, 846
HpyAV	CCTTC	6 cut(s)	19, 323, 763, 919, 1791, 1917
HpyCH4III	ACNGT	4 cut(s)	395, 1033, 1256, 1428
HpyCH4IV	ACGT	1 cut(s)	841
HpyF10VI	GCNNNNNNNGC	2 cut(s)	672, 1742
HpyF3I	CTNAG	3 cut(s)	750, 921, 1347
HpySE526I	ACGT	1 cut(s)	841
Hsp92I	GRCGYC	1 cut(s)	841
HspAI	GCGC	1 cut(s)	673
Ksp22I	TGATCA	2 cut(s)	1243, 1722
Kzo9I	GATC	9 cut(s)	148, 337, 1061, 1243, 1350, 1495, 1617, 1678, 1722
LmnI	GCTCC	1 cut(s)	1474
Lsp1109I	GCAGC	1 cut(s)	660
LweI	GCATC	4 cut(s)	887, 897, 1166, 1615
MabI	ACCWGGT	1 cut(s)	578
MaeI	CTAG	4 cut(s)	56, 75, 177, 1673
MaeII	ACGT	1 cut(s)	841
MaeIII	GTNAC	3 cut(s)	1187, 1450, 1921
MalI	GATC	9 cut(s)	150, 339, 1063, 1245, 1352, 1497, 1619, 1680, 1724
MbiI	CCGCTC	1 cut(s)	666
MboI	GATC	9 cut(s)	148, 337, 1061, 1243, 1350, 1495, 1617, 1678, 1722
MfeI	CAATTG	1 cut(s)	652
MflI	RGATCY	1 cut(s)	1678
MhlI	GDGCHC	1 cut(s)	1279
MlyI	GAGTC	4 cut(s)	65, 512, 536, 989
MmeI	TCCRAC	2 cut(s)	233, 564
Mph1103I	ATGCAT	1 cut(s)	1663
MroXI	GAANNNNTTC	2 cut(s)	8, 1221
MseI	TTAA	4 cut(s)	1707, 1886, 1929, 1972
MslI	CAYNNNNRTG	5 cut(s)	18, 1194, 1282, 1362, 1611
MspA1I	CMGCKG	1 cut(s)	1868
MspI	CCGG	2 cut(s)	1272, 1484
MspR9I	CCNGG	4 cut(s)	580, 1272, 1485, 1562
MunI	CAATTG	1 cut(s)	652
MvaI	CCWGG	2 cut(s)	580, 1562
MvnI	CGCG	1 cut(s)	1362
MwoI	GCNNNNNNNGC	2 cut(s)	672, 1742
NciI	CCSGG	2 cut(s)	1272, 1485
NcoI	CCATGG	1 cut(s)	1283
NdeII	GATC	9 cut(s)	148, 337, 1061, 1243, 1350, 1495, 1617, 1678, 1722
NlaIV	GGNNCC	1 cut(s)	1680
NmuCI	GTSAC	3 cut(s)	1187, 1450, 1921
NsiI	ATGCAT	1 cut(s)	1663
NspI	RCATGY	4 cut(s)	108, 421, 441, 1661
OliI	CACNNNNGTG	1 cut(s)	1194
PagI	TCATGA	3 cut(s)	556, 724, 1116
PciI	ACATGT	2 cut(s)	104, 437
PcsI	WCGNNNNNNNCGW	2 cut(s)	1057, 1192
PdmI	GAANNNNTTC	2 cut(s)	8, 1221
PfeI	GAWTC	6 cut(s)	4, 158, 681, 1296, 1697, 1916
PflMI	CCANNNNNTGG	1 cut(s)	1688
PkrI	GCNGC	1 cut(s)	650
Ple19I	CGATCG	1 cut(s)	340
PleI	GAGTC	4 cut(s)	65, 512, 535, 989
PpsI	GAGTC	4 cut(s)	65, 512, 535, 989
PscI	ACATGT	2 cut(s)	104, 437
PshBI	ATTAAT	1 cut(s)	1929
PsiI	TTATAA	1 cut(s)	1506
Psp6I	CCWGG	2 cut(s)	578, 1560
PspGI	CCWGG	2 cut(s)	578, 1560
PspN4I	GGNNCC	1 cut(s)	1680
PspPI	GGNCC	4 cut(s)	116, 863, 1558, 1895
PstI	CTGCAG	1 cut(s)	495
PstNI	CAGNNNCTG	3 cut(s)	1070, 1756, 1919
PsuI	RGATCY	1 cut(s)	1678
PvuI	CGATCG	1 cut(s)	340
PvuII	CAGCTG	1 cut(s)	1868
RsaI	GTAC	3 cut(s)	489, 497, 1037
RsaNI	GTAC	3 cut(s)	488, 496, 1036
RseI	CAYNNNNRTG	5 cut(s)	18, 1194, 1282, 1362, 1611
SaqAI	TTAA	4 cut(s)	1707, 1886, 1929, 1972
SatI	GCNGC	1 cut(s)	649
Sau3AI	GATC	9 cut(s)	148, 337, 1061, 1243, 1350, 1495, 1617, 1678, 1722
Sau96I	GGNCC	4 cut(s)	116, 863, 1558, 1895
SchI	GAGTC	4 cut(s)	65, 512, 536, 989
ScrFI	CCNGG	4 cut(s)	580, 1272, 1485, 1562
SduI	GDGCHC	1 cut(s)	1279
SexAI	ACCWGGT	1 cut(s)	578
SfaNI	GCATC	4 cut(s)	887, 897, 1166, 1615
SfcI	CTRYAG	4 cut(s)	66, 491, 804, 1543
SinI	GGWCC	4 cut(s)	116, 863, 1558, 1895
SmiMI	CAYNNNNRTG	5 cut(s)	18, 1194, 1282, 1362, 1611
SsiI	CCGC	3 cut(s)	666, 1360, 1736
SspMI	CTAG	4 cut(s)	56, 75, 177, 1673
StyD4I	CCNGG	4 cut(s)	578, 1270, 1483, 1560
StyI	CCWWGG	3 cut(s)	940, 1283, 1687
TaaI	ACNGT	4 cut(s)	395, 1033, 1256, 1428
TaiI	ACGT	1 cut(s)	844
TatI	WGTACW	2 cut(s)	495, 1035
TfiI	GAWTC	6 cut(s)	4, 158, 681, 1296, 1697, 1916
Tru1I	TTAA	4 cut(s)	1707, 1886, 1929, 1972
Tru9I	TTAA	4 cut(s)	1707, 1886, 1929, 1972
TscAI	CASTG	6 cut(s)	718, 1038, 1284, 1737, 1757, 1972
TseFI	GTSAC	3 cut(s)	1187, 1450, 1921
TseI	GCWGC	1 cut(s)	648
Tsp45I	GTSAC	3 cut(s)	1187, 1450, 1921
TspGWI	ACGGA	1 cut(s)	1460
TspRI	CASTG	6 cut(s)	718, 1038, 1284, 1737, 1757, 1972
Van91I	CCANNNNNTGG	1 cut(s)	1688
VneI	GTGCAC	1 cut(s)	1275
VpaK11BI	GGWCC	4 cut(s)	116, 863, 1558, 1895
VspI	ATTAAT	1 cut(s)	1929
XapI	RAATTY	2 cut(s)	695, 1647
XceI	RCATGY	4 cut(s)	108, 421, 441, 1661
XmiI	GTMKAC	1 cut(s)	69
XmnI	GAANNNNTTC	2 cut(s)	8, 1221
XspI	CTAG	4 cut(s)	56, 75, 177, 1673
ZraI	GACGTC	1 cut(s)	842
Zsp2I	ATGCAT	1 cut(s)	1663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.