Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0000786

Physical Location & Seq

Genomic Coordinates Forward (+)

43946786 .. 43951762

Gene Structure 4977 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000003071

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1917 bp

ATGTCATCACCTATCTCTTACCTCCTTTCAGCTCTTCTCTCACTCTTGTTAGTCAACTTCCATGGAAGCAAAGCTGACTTTGTACCCACAAAAAATTGCCCCATATACAATTGTGGTAATGGCCCTGATTTTCACTACCCTTTTTGGAAAATTGAAGACTCCACCGCCGATCAATATTGTGGTTACCCTGGTTTTGGTCTCAGTTGCTCAGAGTCCGGAGAGCCAATACTAAGTCTCCCAAATAATGACTCCTACTATGTGAAAGACATAAGCTTTATTGATTCCACCATCACCCTTGTTGACATTGACGTCGTCGATCAACAATGCCCTAAGCCAAGACACAGTATGAGTGTAGGCACGCTCCCATTGGATTATTCCCCATTGGATGTGAACCTGAGCTTCTACTTCAACTGCACTTCCTTTCCTGTTCCTCTTATTAAGCCTCCCATAACCTGCTTGGAATTATATGGTACCAAAAAGTCTTATGTTTTCAAGGAGGGAGAGCAGCCAGATGGGTTTGATTGGTCTGAAAGTTGTGAGGAGAATGTGGTGGTGACGGTGATGAAGACTAAGGAGCTTTATATTTTTATTGATGAGTTGACTGGTGATTTTGGAGGGCTTATGAACCAGGGGTTTGTGCTTAACTGGACCACGGCGAAGGAGTGCGCTTCGTGTGAGAGTGGTGGTGGTTTGTGTGGGTACAACCCCACTAAAGCTGATGAGTTTCTCTGCTTCTGCAAATATGGCAATGGCCTATGCAGGAAGAAAGGCCCTCAGTTCAACTGGAGATTGAAGGTTGTCGTAGGTCCTTGCTCGGTTATTGGAACTATAGCTGTAATGTGCTTCATTTTCTTTATATGGCGACGCCGCAACAGAACTCGATATGGTCCATCATCCTATGCATCTCGAAGCATCCATTCTAAAAGCTATTCTAGAAGTGATATTAAGAAGGGAAGTGATACTAAGAAGGGAAGTGCATACCCTGGAGTTCATGTCTTCACTTACAAGGAACTTGAACAAGCAACAAACTATTTCGATTCATCTAAAAAACTTGGTGATGGAGGCTTTGGCACTGTTTACTATGGAAGAGTCCGTGATGGGAGAGCAGTTGCTGTCAAGCGACTATATGAAACCAATTGCAAGAGAGTTGATCAGTTCCTGAATGAAATCAAGATTTTAGCTCGCCTACGCCACCAAAACCTTGTCTTACTCTATGGATGCACCTCTCTTCACAGCCGTGAACTCCTCCTTGTCTACGAATATGCTCCCAATGGAACTCTTGCTAATCATCTTCACAGTGGAAAAGCAAAACCCGGTGCACTGCCATGGCATACTCGAATCAACATTGCCGTAGAAACTGCAAGTGCATTGTCCTATCTTCATGCGTCTGAGATCATCCACCGCGATGTGAAAACCACTAACATTCTCCTCGACAACAATTTCTGTGTCAAAGTAGCAGATTTTGGACTATCTCGTCTCTTTCCCATGGATGTCACCCATGTATCAACTGCTCCACAAGGAACTCCAGGTTATGTCGATCCTGATTATTACCAATGCTACCAGCTTACTACAAAGAGTGATGTCTATGGCTTCGGTGTGGTCCTGGTTGAACTCATATCATCCTTGCCTGCCGTTGATATCACAAGGCATCGACAGGAGATCAATTTGGCGAACATGGCCGTCAACAAGATTCAGAAAAATGCATTGCATGAGCTAGTTGATCCATCCCTGGGGTATGAATCAGACTTAAAAGTAAGAAAAATGATCAATGCAGTGGCGGAATTAGCGTTTCAGTGCCTGCAAAAGACGGACATGAGACCTTCTATGGTTGATGTGGAAAATGAACTAAAGAGGATACAGAGTGATGATTTTAGCAAAGAAATTAAAGGCAGAGGAAATAGATATTTCAGCCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010228 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023052 GO:0031668 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0036211 GO:0042221 GO:0042631 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0104004 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

639

Amino Acids

71.6

Weight (kDa)

7.93

Isoelectric Point (pI)

34.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	33 - 101	8.8e-17	Wall-associated receptor kinase galacturonan-binding
WAK_assoc	PF14380	152 - 247	3.9e-17	Wall-associated receptor kinase C-terminal
Pkinase	PF00069	346 - 603	2.7e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	348 - 561	6.5e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18390 AT1G18390
fragaria_vesca	FvH4_5g11760 FvH4_5g11760 FvH4_5g11790
malus_domestica	MD06G1218900.v1.1 MD06G1219200.v1.1 MD14G1228700.v1.1
prunus_persica	Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1
pyrus_communis	pycom06g19560 pycom06g19580 pycom14g19000
rosa_chinensis	RchiOBHm_Chr7g0185891 RchiOBHm_Chr7g0185941 RchiOBHm_Chr7g0185971 RchiOBHm_Chr7g0186001 RchiOBHm_Chr7g0186021 RchiOBHm_Chr7g0209991 RchiOBHm_Chr7g0210001
rosa_laevigata	RLG00000003071 RLG00000004872 RLG00000004873 RLG00000004875 RLG00000005413
rosa_multiflora	Rmu_co8007212.1_g000001 Rmu_co8076798.1_g000001 Rmu_sc0000194.1_g000013 Rmu_sc0000194.1_g000017 Rmu_sc0000194.1_g000019 Rmu_sc0004509.1_g000017 Rmu_sc0004509.1_g000018 Rmu_sc0005665.1_g000002 Rmu_sc0005665.1_g000004 Rmu_sc0005665.1_g000020 Rmu_sc0005665.1_g000023 Rmu_sc0005665.1_g000035
rosa_roxburghii	Rroxscaffold_1G00039510 Rroxscaffold_3G00248670 Rroxscaffold_3G00257880 Rroxscaffold_3G00268500 Rroxscaffold_3G00268510 Rroxscaffold_3G00268530 Rroxscaffold_3G00268580
rosa_rugosa	Rorug06G0471800 Rorug07G0117900
rosa_samantha	Rh1BG104700 Rh4CG290300 Rh7AG070300 Rh7AG070400 Rh7AG070600 Rh7AG251700 Rh7BG086300 Rh7BG086400 Rh7BG246300 Rh7CG077400 Rh7CG077800 Rh7CG078000 Rh7CG268500 Rh7DG077400 Rh7DG077600 Rh7DG077900 Rh7DG078000 Rh7DG258500
rosa_wichuraiana	Rw7G006440 Rw7G006470 Rw7G006480 Rw7G021370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	308, 1473
AatII	GACGTC	1 cut(s)	312
Acc36I	ACCTGC	1 cut(s)	461
Acc65I	GGTACC	1 cut(s)	470
AccB1I	GGYRCC	1 cut(s)	470
AccI	GTMKAC	1 cut(s)	1254
AccII	CGCG	1 cut(s)	1404
AccIII	TCCGGA	1 cut(s)	215
AciI	CCGC	4 cut(s)	165, 868, 1402, 1778
AclWI	GGATC	2 cut(s)	1532, 1715
AcoI	YGGCCR	1 cut(s)	1677
AcyI	GRCGYC	2 cut(s)	309, 865
AfaI	GTAC	3 cut(s)	84, 472, 701
AfiI	CCNNNNNNNGG	2 cut(s)	194, 1730
AgsI	TTSAA	7 cut(s)	155, 409, 493, 781, 793, 1016, 1610
AjnI	CCWGG	6 cut(s)	187, 627, 982, 1525, 1602, 1728
AleI	CACNNNNGTG	1 cut(s)	1236
Alw21I	GWGCWC	1 cut(s)	1321
Alw26I	GTCTC	4 cut(s)	203, 239, 1481, 1810
Alw44I	GTGCAC	1 cut(s)	1317
AlwI	GGATC	2 cut(s)	1532, 1715
AlwNI	CAGNNNCTG	3 cut(s)	1112, 1159, 1798
Aor13HI	TCCGGA	1 cut(s)	215
AoxI	GGCC	4 cut(s)	121, 751, 769, 1677
ApaLI	GTGCAC	1 cut(s)	1317
ApeKI	GCWGC	1 cut(s)	505
Asp718I	GGTACC	1 cut(s)	470
AspLEI	GCGC	1 cut(s)	668
AspS9I	GGNCC	6 cut(s)	122, 648, 770, 806, 887, 1600
AsuC2I	CCSGG	1 cut(s)	1314
AsuHPI	GGTGA	6 cut(s)	283, 565, 571, 617, 1067, 1486
AvaII	GGWCC	4 cut(s)	648, 806, 887, 1600
BaeGI	GKGCMC	1 cut(s)	1321
BaeI	ACNNNNGTAYC	2 cut(s)	1485, 1518
BanI	GGYRCC	1 cut(s)	470
BbsI	GAAGAC	3 cut(s)	162, 572, 988
Bbv12I	GWGCWC	1 cut(s)	1321
BbvI	GCAGC	1 cut(s)	517
BccI	CCATC	6 cut(s)	296, 506, 898, 1052, 1091, 1732
BceAI	ACGGC	5 cut(s)	669, 1221, 1334, 1616, 1664
BciT130I	CCWGG	6 cut(s)	189, 629, 984, 1527, 1604, 1730
BciVI	GTATCC	1 cut(s)	1848
BclI	TGATCA	2 cut(s)	1150, 1764
BcnI	CCSGG	1 cut(s)	1314
BcoDI	GTCTC	4 cut(s)	203, 239, 1481, 1810
BfaI	CTAG	2 cut(s)	933, 1715
BfmI	CTRYAG	1 cut(s)	828
BfuAI	ACCTGC	1 cut(s)	461
BfuI	GTATCC	1 cut(s)	1848
BisI	GCNGC	2 cut(s)	506, 868
BlsI	GCNGC	2 cut(s)	507, 869
Bme1390I	CCNGG	7 cut(s)	189, 629, 984, 1314, 1527, 1604, 1730
Bme18I	GGWCC	4 cut(s)	648, 806, 887, 1600
BmgT120I	GGNCC	6 cut(s)	122, 648, 770, 806, 887, 1600
BmiI	GGNNCC	1 cut(s)	472
BmrFI	CCNGG	7 cut(s)	189, 629, 984, 1314, 1527, 1604, 1730
BmsI	GCATC	4 cut(s)	911, 921, 1208, 1657
BpiI	GAAGAC	3 cut(s)	162, 572, 988
BpmI	CTGGAG	3 cut(s)	805, 1005, 1509
Bpu10I	CCTNAGC	2 cut(s)	330, 395
BpuMI	CCSGG	1 cut(s)	1314
BsaHI	GRCGYC	2 cut(s)	309, 865
BsaI	GGTCTC	2 cut(s)	203, 1810
BsaJI	CCNNGG	9 cut(s)	61, 187, 628, 651, 982, 1325, 1485, 1728, 1729
BsaWI	WCCGGW	1 cut(s)	215
BsaXI	ACNNNNNCTCC	4 cut(s)	219, 249, 978, 1008
Bsc4I	CCNNNNNNNGG	2 cut(s)	194, 1730
Bse1I	ACTGG	3 cut(s)	607, 650, 788
Bse3DI	GCAATG	3 cut(s)	754, 1344, 1703
BseAI	TCCGGA	1 cut(s)	215
BseBI	CCWGG	6 cut(s)	189, 629, 984, 1527, 1604, 1730
BseDI	CCNNGG	9 cut(s)	61, 187, 628, 651, 982, 1325, 1485, 1728, 1729
BseGI	GGATG	8 cut(s)	391, 893, 912, 1223, 1395, 1495, 1619, 1724
BseLI	CCNNNNNNNGG	2 cut(s)	194, 1730
BseMI	GCAATG	3 cut(s)	754, 1344, 1703
BseMII	CTCAG	5 cut(s)	214, 222, 386, 788, 1380
BseNI	ACTGG	3 cut(s)	607, 650, 788
BseRI	GAGGAG	3 cut(s)	554, 1235, 1418
BseSI	GKGCMC	1 cut(s)	1321
BseXI	GCAGC	1 cut(s)	517
BsgI	GTGCAG	1 cut(s)	397
Bsh1236I	CGCG	1 cut(s)	1404
BshFI	GGCC	4 cut(s)	123, 753, 771, 1679
BshNI	GGYRCC	1 cut(s)	470
BsiHKAI	GWGCWC	1 cut(s)	1321
BsiSI	CCGG	2 cut(s)	216, 1314
BslI	CCNNNNNNNGG	2 cut(s)	194, 1730
BsmAI	GTCTC	4 cut(s)	203, 239, 1481, 1810
BsmBI	CGTCTC	1 cut(s)	1481
BsnI	GGCC	4 cut(s)	123, 753, 771, 1679
Bso31I	GGTCTC	2 cut(s)	203, 1810
Bsp1286I	GDGCHC	1 cut(s)	1321
Bsp13I	TCCGGA	1 cut(s)	215
Bsp143I	GATC	8 cut(s)	169, 316, 1150, 1392, 1537, 1659, 1720, 1764
Bsp19I	CCATGG	3 cut(s)	61, 1325, 1485
BspACI	CCGC	4 cut(s)	165, 868, 1402, 1778
BspANI	GGCC	4 cut(s)	123, 753, 771, 1679
BspCNI	CTCAG	5 cut(s)	213, 221, 387, 787, 1381
BspEI	TCCGGA	1 cut(s)	215
BspFNI	CGCG	1 cut(s)	1404
BspLI	GGNNCC	1 cut(s)	472
BspMI	ACCTGC	1 cut(s)	461
BspPI	GGATC	2 cut(s)	1532, 1715
BspQI	GCTCTTC	1 cut(s)	39
BspT107I	GGYRCC	1 cut(s)	470
BspTNI	GGTCTC	2 cut(s)	203, 1810
BsrDI	GCAATG	3 cut(s)	754, 1344, 1703
BsrI	ACTGG	3 cut(s)	607, 650, 788
BssECI	CCNNGG	9 cut(s)	61, 187, 628, 651, 982, 1325, 1485, 1728, 1729
BssMI	GATC	8 cut(s)	169, 316, 1150, 1392, 1537, 1659, 1720, 1764
BssNI	GRCGYC	2 cut(s)	309, 865
BssT1I	CCWWGG	3 cut(s)	61, 1325, 1485
Bst2UI	CCWGG	6 cut(s)	189, 629, 984, 1527, 1604, 1730
Bst4CI	ACNGT	4 cut(s)	344, 559, 1075, 1298
Bst6I	CTCTTC	3 cut(s)	39, 1081, 1233
BstACI	GRCGYC	2 cut(s)	309, 865
BstC8I	GCNNGC	4 cut(s)	359, 1183, 1629, 1799
BstDEI	CTNAG	9 cut(s)	200, 208, 230, 330, 395, 570, 774, 963, 1389
BstDSI	CCRYGG	4 cut(s)	61, 651, 1325, 1485
BstEII	GGTNACC	1 cut(s)	182
BstF5I	GGATG	8 cut(s)	391, 893, 912, 1223, 1395, 1495, 1619, 1724
BstFNI	CGCG	1 cut(s)	1404
BstHHI	GCGC	1 cut(s)	668
BstKTI	GATC	8 cut(s)	172, 319, 1153, 1395, 1540, 1662, 1723, 1767
BstMAI	GTCTC	4 cut(s)	203, 239, 1481, 1810
BstMBI	GATC	8 cut(s)	169, 316, 1150, 1392, 1537, 1659, 1720, 1764
BstMWI	GCNNNNNNNGC	3 cut(s)	744, 1676, 1784
BstNI	CCWGG	6 cut(s)	189, 629, 984, 1527, 1604, 1730
BstPI	GGTNACC	1 cut(s)	182
BstSCI	CCNGG	7 cut(s)	187, 627, 982, 1312, 1525, 1602, 1728
BstSFI	CTRYAG	1 cut(s)	828
BstSLI	GKGCMC	1 cut(s)	1321
BstUI	CGCG	1 cut(s)	1404
BstV1I	GCAGC	1 cut(s)	517
BstV2I	GAAGAC	3 cut(s)	162, 572, 988
BsuI	GTATCC	1 cut(s)	1848
BsuRI	GGCC	4 cut(s)	123, 753, 771, 1679
BtgI	CCRYGG	4 cut(s)	61, 651, 1325, 1485
BtgZI	GCGATG	1 cut(s)	1419
BtsCI	GGATG	8 cut(s)	391, 893, 912, 1223, 1395, 1495, 1619, 1724
BtsI	GCAGTG	2 cut(s)	1319, 1779
BtsIMutI	CAGTG	5 cut(s)	1071, 1303, 1319, 1779, 1799
BveI	ACCTGC	1 cut(s)	461
Cac8I	GCNNGC	4 cut(s)	359, 1183, 1629, 1799
CaiI	CAGNNNCTG	3 cut(s)	1112, 1159, 1798
CfoI	GCGC	1 cut(s)	668
Cfr13I	GGNCC	6 cut(s)	122, 648, 770, 806, 887, 1600
CseI	GACGC	2 cut(s)	873, 1374
Csp6I	GTAC	3 cut(s)	83, 471, 700
CviAII	CATG	9 cut(s)	62, 992, 1326, 1382, 1486, 1499, 1675, 1709, 1813
CviQI	GTAC	3 cut(s)	83, 471, 700
DdeI	CTNAG	9 cut(s)	200, 208, 230, 330, 395, 570, 774, 963, 1389
DpnI	GATC	8 cut(s)	171, 318, 1152, 1394, 1539, 1661, 1722, 1766
DpnII	GATC	8 cut(s)	169, 316, 1150, 1392, 1537, 1659, 1720, 1764
DrdI	GACNNNNNNGTC	2 cut(s)	308, 1473
DseDI	GACNNNNNNGTC	2 cut(s)	308, 1473
EaeI	YGGCCR	1 cut(s)	1677
Eam1104I	CTCTTC	3 cut(s)	39, 1081, 1233
EarI	CTCTTC	3 cut(s)	39, 1081, 1233
EciI	GGCGGA	1 cut(s)	1793
Eco130I	CCWWGG	3 cut(s)	61, 1325, 1485
Eco31I	GGTCTC	2 cut(s)	203, 1810
Eco32I	GATATC	1 cut(s)	1639
Eco47I	GGWCC	4 cut(s)	648, 806, 887, 1600
Eco91I	GGTNACC	1 cut(s)	182
EcoO109I	RGGNCCY	2 cut(s)	770, 806
EcoO65I	GGTNACC	1 cut(s)	182
EcoRII	CCWGG	6 cut(s)	187, 627, 982, 1525, 1602, 1728
EcoRV	GATATC	1 cut(s)	1639
EcoT14I	CCWWGG	3 cut(s)	61, 1325, 1485
EcoT22I	ATGCAT	2 cut(s)	904, 1705
ErhI	CCWWGG	3 cut(s)	61, 1325, 1485
Esp3I	CGTCTC	1 cut(s)	1481
FaeI	CATG	9 cut(s)	65, 995, 1329, 1385, 1489, 1502, 1678, 1712, 1816
FatI	CATG	9 cut(s)	61, 991, 1325, 1381, 1485, 1498, 1674, 1708, 1812
FbaI	TGATCA	2 cut(s)	1150, 1764
FblI	GTMKAC	1 cut(s)	1254
Fnu4HI	GCNGC	2 cut(s)	506, 868
FokI	GGATG	8 cut(s)	398, 880, 899, 1230, 1382, 1502, 1606, 1711
Fsp4HI	GCNGC	2 cut(s)	506, 868
FspBI	CTAG	2 cut(s)	933, 1715
GlaI	GCGC	1 cut(s)	667
GluI	GCNGC	2 cut(s)	506, 868
GsuI	CTGGAG	3 cut(s)	805, 1005, 1509
HaeIII	GGCC	4 cut(s)	123, 753, 771, 1679
HapII	CCGG	2 cut(s)	216, 1314
HgaI	GACGC	2 cut(s)	873, 1374
HhaI	GCGC	1 cut(s)	668
Hin1I	GRCGYC	2 cut(s)	309, 865
Hin1II	CATG	9 cut(s)	65, 995, 1329, 1385, 1489, 1502, 1678, 1712, 1816
Hin6I	GCGC	1 cut(s)	666
HinP1I	GCGC	1 cut(s)	666
HincII	GTYRAC	4 cut(s)	55, 301, 600, 1684
HindII	GTYRAC	4 cut(s)	55, 301, 600, 1684
HindIII	AAGCTT	1 cut(s)	271
HinfI	GANTC	9 cut(s)	158, 212, 248, 281, 1037, 1089, 1338, 1690, 1739
HpaII	CCGG	2 cut(s)	216, 1314
HphI	GGTGA	6 cut(s)	283, 565, 571, 617, 1067, 1486
Hpy166II	GTNNAC	9 cut(s)	55, 301, 391, 600, 1078, 1241, 1255, 1319, 1684
Hpy188I	TCNGA	5 cut(s)	211, 529, 1390, 1695, 1744
Hpy188III	TCNNGA	6 cut(s)	216, 906, 933, 1159, 1171, 1541
Hpy8I	GTNNAC	9 cut(s)	55, 301, 391, 600, 1078, 1241, 1255, 1319, 1684
Hpy99I	CGWCG	3 cut(s)	314, 317, 867
HpyAV	CCTTC	5 cut(s)	652, 787, 943, 961, 1830
HpyCH4III	ACNGT	4 cut(s)	344, 559, 1075, 1298
HpyCH4IV	ACGT	1 cut(s)	309
HpyF10VI	GCNNNNNNNGC	3 cut(s)	744, 1676, 1784
HpyF3I	CTNAG	9 cut(s)	200, 208, 230, 330, 395, 570, 774, 963, 1389
HpySE526I	ACGT	1 cut(s)	309
Hsp92I	GRCGYC	2 cut(s)	309, 865
Hsp92II	CATG	9 cut(s)	65, 995, 1329, 1385, 1489, 1502, 1678, 1712, 1816
HspAI	GCGC	1 cut(s)	666
Kpn2I	TCCGGA	1 cut(s)	215
KpnI	GGTACC	1 cut(s)	474
Ksp22I	TGATCA	2 cut(s)	1150, 1764
Kzo9I	GATC	8 cut(s)	169, 316, 1150, 1392, 1537, 1659, 1720, 1764
LguI	GCTCTTC	1 cut(s)	39
LmnI	GCTCC	4 cut(s)	366, 574, 1270, 1516
Lsp1109I	GCAGC	1 cut(s)	517
LweI	GCATC	4 cut(s)	911, 921, 1208, 1657
MaeI	CTAG	2 cut(s)	933, 1715
MaeII	ACGT	1 cut(s)	309
MaeIII	GTNAC	3 cut(s)	182, 553, 1492
MalI	GATC	8 cut(s)	171, 318, 1152, 1394, 1539, 1661, 1722, 1766
MboI	GATC	8 cut(s)	169, 316, 1150, 1392, 1537, 1659, 1720, 1764
MboII	GAAGA	9 cut(s)	26, 167, 577, 775, 988, 1098, 1220, 1283, 1370
MfeI	CAATTG	2 cut(s)	109, 1135
MhlI	GDGCHC	1 cut(s)	1321
MluCI	AATT	9 cut(s)	94, 109, 150, 461, 1135, 1438, 1663, 1781, 1881
MlyI	GAGTC	4 cut(s)	152, 221, 242, 1098
Mph1103I	ATGCAT	2 cut(s)	904, 1705
MroI	TCCGGA	1 cut(s)	215
MseI	TTAA	5 cut(s)	438, 642, 945, 1748, 1884
MslI	CAYNNNNRTG	3 cut(s)	1236, 1324, 1404
MspI	CCGG	2 cut(s)	216, 1314
MspR9I	CCNGG	7 cut(s)	189, 629, 984, 1314, 1527, 1604, 1730
MunI	CAATTG	2 cut(s)	109, 1135
MvaI	CCWGG	6 cut(s)	189, 629, 984, 1527, 1604, 1730
MvnI	CGCG	1 cut(s)	1404
MwoI	GCNNNNNNNGC	3 cut(s)	744, 1676, 1784
NciI	CCSGG	1 cut(s)	1314
NcoI	CCATGG	3 cut(s)	61, 1325, 1485
NdeII	GATC	8 cut(s)	169, 316, 1150, 1392, 1537, 1659, 1720, 1764
NlaIII	CATG	9 cut(s)	65, 995, 1329, 1385, 1489, 1502, 1678, 1712, 1816
NlaIV	GGNNCC	1 cut(s)	472
NmuCI	GTSAC	2 cut(s)	553, 1492
NsiI	ATGCAT	2 cut(s)	904, 1705
OliI	CACNNNNGTG	1 cut(s)	1236
PasI	CCCWGGG	1 cut(s)	1729
PciSI	GCTCTTC	1 cut(s)	39
PfeI	GAWTC	5 cut(s)	281, 1037, 1338, 1690, 1739
PflFI	GACNNNGTC	1 cut(s)	311
PkrI	GCNGC	2 cut(s)	507, 869
PleI	GAGTC	4 cut(s)	152, 220, 242, 1097
PpsI	GAGTC	4 cut(s)	152, 220, 242, 1097
PpuMI	RGGWCCY	1 cut(s)	806
Psp5II	RGGWCCY	1 cut(s)	806
Psp6I	CCWGG	6 cut(s)	187, 627, 982, 1525, 1602, 1728
PspEI	GGTNACC	1 cut(s)	182
PspGI	CCWGG	6 cut(s)	187, 627, 982, 1525, 1602, 1728
PspN4I	GGNNCC	1 cut(s)	472
PspPI	GGNCC	6 cut(s)	122, 648, 770, 806, 887, 1600
PspPPI	RGGWCCY	1 cut(s)	806
PstNI	CAGNNNCTG	3 cut(s)	1112, 1159, 1798
PsyI	GACNNNGTC	1 cut(s)	311
RsaI	GTAC	3 cut(s)	84, 472, 701
RsaNI	GTAC	3 cut(s)	83, 471, 700
RseI	CAYNNNNRTG	3 cut(s)	1236, 1324, 1404
SapI	GCTCTTC	1 cut(s)	39
SaqAI	TTAA	5 cut(s)	438, 642, 945, 1748, 1884
SatI	GCNGC	2 cut(s)	506, 868
Sau3AI	GATC	8 cut(s)	169, 316, 1150, 1392, 1537, 1659, 1720, 1764
Sau96I	GGNCC	6 cut(s)	122, 648, 770, 806, 887, 1600
SchI	GAGTC	4 cut(s)	152, 221, 242, 1098
ScrFI	CCNGG	7 cut(s)	189, 629, 984, 1314, 1527, 1604, 1730
SduI	GDGCHC	1 cut(s)	1321
SfaNI	GCATC	4 cut(s)	911, 921, 1208, 1657
SfcI	CTRYAG	1 cut(s)	828
SinI	GGWCC	4 cut(s)	648, 806, 887, 1600
SmiMI	CAYNNNNRTG	3 cut(s)	1236, 1324, 1404
Sse9I	AATT	9 cut(s)	94, 109, 150, 461, 1135, 1438, 1663, 1781, 1881
SsiI	CCGC	4 cut(s)	165, 868, 1402, 1778
SspI	AATATT	1 cut(s)	176
SspMI	CTAG	2 cut(s)	933, 1715
StyD4I	CCNGG	7 cut(s)	187, 627, 982, 1312, 1525, 1602, 1728
StyI	CCWWGG	3 cut(s)	61, 1325, 1485
TaaI	ACNGT	4 cut(s)	344, 559, 1075, 1298
TaiI	ACGT	1 cut(s)	312
TaqI	TCGA	8 cut(s)	315, 880, 907, 1035, 1336, 1431, 1536, 1651
TasI	AATT	9 cut(s)	94, 109, 150, 461, 1135, 1438, 1663, 1781, 1881
TauI	GCSGC	1 cut(s)	870
TfiI	GAWTC	5 cut(s)	281, 1037, 1338, 1690, 1739
Tru1I	TTAA	5 cut(s)	438, 642, 945, 1748, 1884
Tru9I	TTAA	5 cut(s)	438, 642, 945, 1748, 1884
TscAI	CASTG	5 cut(s)	1078, 1303, 1326, 1779, 1799
TseFI	GTSAC	2 cut(s)	553, 1492
TseI	GCWGC	1 cut(s)	505
Tsp45I	GTSAC	2 cut(s)	553, 1492
TspGWI	ACGGA	2 cut(s)	1082, 1823
TspRI	CASTG	5 cut(s)	1078, 1303, 1326, 1779, 1799
Tth111I	GACNNNGTC	1 cut(s)	311
VneI	GTGCAC	1 cut(s)	1317
VpaK11BI	GGWCC	4 cut(s)	648, 806, 887, 1600
XbaI	TCTAGA	1 cut(s)	932
XcmI	CCANNNNNNNNNTGG	1 cut(s)	454
XmiI	GTMKAC	1 cut(s)	1254
XspI	CTAG	2 cut(s)	933, 1715
ZraI	GACGTC	1 cut(s)	310
Zsp2I	ATGCAT	2 cut(s)	904, 1705

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.