Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005665.1

Orthogroup ID

OG0000786

Physical Location & Seq

Genomic Coordinates Forward (+)

69297 .. 76042

Gene Structure 6746 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005665.1_g000020.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

atgtcatcacctatctcttatcttcttgcagctcttctctcactcttgttattcaactttcatggaagcaaagcccactttgtaccctcaacaaattgccccatatacaattgcggtaatgatctgaagtttcactaccctttttggaaaattgaagactccaccgccgatcaatattgtggttaccctggttttggtctcaattgctcagagtctggagagcccatactgagtctcccaaataatgatttctactatgtgaaagacataaactttactgattccaccatcacccttgttaacattgacgtcgtcggtcaacaatggcctaagccaagacacagtatgagtgtaggcacgctcccattggattattcgccattggatgtgaacctgagcttctacttcaactgcacttcctttcctggtccttttaagcctcccaaaacctgcttgggaatatggggtaccaaaaagttttacgttttcacagagggaaatgaaccagatgggtttgattggtctgaaagttgtgaggagaaggtggtggtgacggtgatgaagactgaggagctttctattatcattgatgagttgactggtgatgattttggagagcttatgaagcaggggtttgtgcttaactggaccacggcgaaggagtgcgcttcgtgtgagagtggtggtggtttctgtgggtacaactccactaaagctgatgagtttctctgcttccacaaatatagtgatggcctacgcgagaagaaaggccctaagctcaaccggagattgaaggttgtcataggcctttgctcggttattggaactatagctgtaatgtgcttcattttttttatatggcgacgccgcaacagaaatcgatatggtccatcatcctacgcatctcgaatcatctattctaaaagctattccagaagtgatactgagaagggaagtgcatacactggagttcatgtattcacctacaatgaacttgaacaagcaacaaactatttcgattcatctaaagaacttggtggtggaggctttggcagagtttactatggaaaagtccgtgatgggcgagcagttgctgtcaagcgactatatgaaaccaattgcaggagagttgagcagttcctgaatgaaattgagattttagctcgcctacgccaccgaaaccttgtgttactctatggatgcacctctcgtcacagccgtgaactcctccttgtctacgaatatgttcccaatggaactcttgctgatcatcttcatggtggaaaagcaaaacccggtgcactgccatggcatactcgaatcaacattgccgtagaaactgcaagtgcattgtcctatcttcatgcgtctgagatcatccaccgtgacgtgaaaaccactaacattcttcttgacaacaatttctgtgtcaaagtagcagattttggactatctcgtctcttgcccacggatgtcacccatgtatcaactgctccacaaggaactccaggttatgttgatcctgattataaccaatgctaccagcttactatgaagagtgatgtctatagcttcggtgtggtcctggttgaactcatatcatccttgcctgctgttgatatcacaaggcatcgacaggagatcaatttatcaagcatggctatcaacaagattcagaaacatgcattgcatgagctagtggatccatccctggggtatgaatcggactttaaagtaagaaaaatgatcaatgcagtggcggaattagcgtttcagtgcctgcaaaatgagaccgacatgagaccttctatggttgatgtggaaaatgaactaaagaggatacagagtgatgattttagtaaagaaaaggcagaggaaattgatatttcagctgatgatgttgtgctgttaaagagtggtcctttgccaccttcaccagattctgtgacaataaattgggttagcatgtcttcaacaccaaatgatagcactgcttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010228 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023052 GO:0031668 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0036211 GO:0042221 GO:0042631 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0104004 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

665

Amino Acids

74.64

Weight (kDa)

5.91

Isoelectric Point (pI)

42.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18390 AT1G18390
fragaria_vesca	FvH4_5g11760 FvH4_5g11760 FvH4_5g11790
malus_domestica	MD06G1218900.v1.1 MD06G1219200.v1.1 MD14G1228700.v1.1
prunus_persica	Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1
pyrus_communis	pycom06g19560 pycom06g19580 pycom14g19000
rosa_chinensis	RchiOBHm_Chr7g0185891 RchiOBHm_Chr7g0185941 RchiOBHm_Chr7g0185971 RchiOBHm_Chr7g0186001 RchiOBHm_Chr7g0186021 RchiOBHm_Chr7g0209991 RchiOBHm_Chr7g0210001
rosa_laevigata	RLG00000003071 RLG00000004872 RLG00000004873 RLG00000004875 RLG00000005413
rosa_multiflora	Rmu_co8007212.1_g000001 Rmu_co8076798.1_g000001 Rmu_sc0000194.1_g000013 Rmu_sc0000194.1_g000017 Rmu_sc0000194.1_g000019 Rmu_sc0004509.1_g000017 Rmu_sc0004509.1_g000018 Rmu_sc0005665.1_g000002 Rmu_sc0005665.1_g000004 Rmu_sc0005665.1_g000020 Rmu_sc0005665.1_g000023 Rmu_sc0005665.1_g000035
rosa_roxburghii	Rroxscaffold_1G00039510 Rroxscaffold_3G00248670 Rroxscaffold_3G00257880 Rroxscaffold_3G00268500 Rroxscaffold_3G00268510 Rroxscaffold_3G00268530 Rroxscaffold_3G00268580
rosa_rugosa	Rorug06G0471800 Rorug07G0117900
rosa_samantha	Rh1BG104700 Rh4CG290300 Rh7AG070300 Rh7AG070400 Rh7AG070600 Rh7AG251700 Rh7BG086300 Rh7BG086400 Rh7BG246300 Rh7CG077400 Rh7CG077800 Rh7CG078000 Rh7CG268500 Rh7DG077400 Rh7DG077600 Rh7DG077900 Rh7DG078000 Rh7DG258500
rosa_wichuraiana	Rw7G006440 Rw7G006470 Rw7G006480 Rw7G021370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1530
AasI	GACNNNNNNGTC	1 cut(s)	1455
AatII	GACGTC	1 cut(s)	312
Acc36I	ACCTGC	1 cut(s)	458
Acc65I	GGTACC	1 cut(s)	467
AccB1I	GGYRCC	1 cut(s)	467
AccI	GTMKAC	1 cut(s)	1236
AccII	CGCG	1 cut(s)	759
AciI	CCGC	4 cut(s)	114, 165, 868, 1760
AclWI	GGATC	3 cut(s)	1514, 1697, 1710
AcuI	CTGAAG	1 cut(s)	146
AcyI	GRCGYC	2 cut(s)	309, 865
AfaI	GTAC	3 cut(s)	84, 469, 701
AfiI	CCNNNNNNNGG	4 cut(s)	194, 814, 1122, 1712
AgsI	TTSAA	7 cut(s)	55, 155, 409, 793, 998, 1592, 1974
AjiI	CACGTC	1 cut(s)	1390
AjnI	CCWGG	5 cut(s)	187, 424, 1507, 1584, 1710
AleI	CACNNNNGTG	1 cut(s)	1218
Alw21I	GWGCWC	1 cut(s)	1303
Alw26I	GTCTC	5 cut(s)	203, 239, 1463, 1784, 1795
Alw44I	GTGCAC	1 cut(s)	1299
AlwI	GGATC	3 cut(s)	1514, 1697, 1710
AlwNI	CAGNNNCTG	5 cut(s)	215, 1094, 1141, 1780, 1943
AoxI	GGCC	4 cut(s)	326, 751, 769, 805
ApaLI	GTGCAC	1 cut(s)	1299
ApeKI	GCWGC	1 cut(s)	29
Asp700I	GAANNNNTTC	1 cut(s)	1245
Asp718I	GGTACC	1 cut(s)	467
AspLEI	GCGC	1 cut(s)	668
AspS9I	GGNCC	6 cut(s)	428, 648, 770, 887, 1582, 1919
AsuC2I	CCSGG	1 cut(s)	1296
AsuHPI	GGTGA	7 cut(s)	283, 562, 568, 614, 973, 1468, 1926
AvaII	GGWCC	5 cut(s)	428, 648, 887, 1582, 1919
BaeGI	GKGCMC	1 cut(s)	1303
BaeI	ACNNNNGTAYC	2 cut(s)	1467, 1500
BamHI	GGATCC	1 cut(s)	1702
BanI	GGYRCC	1 cut(s)	467
BanII	GRGCYC	1 cut(s)	225
BarI	GAAGNNNNNNTAC	2 cut(s)	119, 151
BbsI	GAAGAC	3 cut(s)	162, 569, 1962
Bbv12I	GWGCWC	1 cut(s)	1303
BbvI	GCAGC	1 cut(s)	41
BccI	CCATC	6 cut(s)	296, 503, 743, 898, 1073, 1714
BceAI	ACGGC	3 cut(s)	669, 1203, 1316
BciT130I	CCWGG	5 cut(s)	189, 426, 1509, 1586, 1712
BciVI	GTATCC	1 cut(s)	1833
BclI	TGATCA	2 cut(s)	1267, 1746
BcnI	CCSGG	1 cut(s)	1296
BcoDI	GTCTC	5 cut(s)	203, 239, 1463, 1784, 1795
BfaI	CTAG	1 cut(s)	1697
BfmI	CTRYAG	2 cut(s)	828, 1567
BfuAI	ACCTGC	1 cut(s)	458
BfuI	GTATCC	1 cut(s)	1833
BisI	GCNGC	2 cut(s)	30, 868
BlsI	GCNGC	2 cut(s)	31, 869
Bme1390I	CCNGG	6 cut(s)	189, 426, 1296, 1509, 1586, 1712
Bme18I	GGWCC	5 cut(s)	428, 648, 887, 1582, 1919
BmgBI	CACGTC	1 cut(s)	1390
BmgT120I	GGNCC	6 cut(s)	428, 648, 770, 887, 1582, 1919
BmiI	GGNNCC	2 cut(s)	469, 1704
BmrFI	CCNGG	6 cut(s)	189, 426, 1296, 1509, 1586, 1712
BmsI	GCATC	3 cut(s)	911, 1190, 1639
BpiI	GAAGAC	3 cut(s)	162, 569, 1962
BpmI	CTGGAG	3 cut(s)	237, 987, 1491
Bpu10I	CCTNAGC	3 cut(s)	330, 395, 774
BpuMI	CCSGG	1 cut(s)	1296
Bsa29I	ATCGAT	1 cut(s)	880
BsaHI	GRCGYC	2 cut(s)	309, 865
BsaI	GGTCTC	3 cut(s)	203, 1784, 1795
BsaJI	CCNNGG	6 cut(s)	187, 651, 1307, 1467, 1710, 1711
BsaWI	WCCGGW	1 cut(s)	783
BsaXI	ACNNNNNCTCC	4 cut(s)	219, 249, 960, 990
Bsc4I	CCNNNNNNNGG	4 cut(s)	194, 814, 1122, 1712
Bse1I	ACTGG	3 cut(s)	604, 650, 970
Bse3DI	GCAATG	2 cut(s)	1326, 1685
BseBI	CCWGG	5 cut(s)	189, 426, 1509, 1586, 1712
BseCI	ATCGAT	1 cut(s)	880
BseDI	CCNNGG	6 cut(s)	187, 651, 1307, 1467, 1710, 1711
BseGI	GGATG	7 cut(s)	391, 893, 1205, 1377, 1477, 1601, 1706
BseLI	CCNNNNNNNGG	4 cut(s)	194, 814, 1122, 1712
BseMI	GCAATG	2 cut(s)	1326, 1685
BseMII	CTCAG	6 cut(s)	221, 222, 386, 558, 936, 1362
BseNI	ACTGG	3 cut(s)	604, 650, 970
BseRI	GAGGAG	3 cut(s)	551, 584, 1217
BseSI	GKGCMC	1 cut(s)	1303
BseXI	GCAGC	1 cut(s)	41
BsgI	GTGCAG	1 cut(s)	397
Bsh1236I	CGCG	1 cut(s)	759
BshFI	GGCC	4 cut(s)	328, 753, 771, 807
BshNI	GGYRCC	1 cut(s)	467
BshVI	ATCGAT	1 cut(s)	880
BsiHKAI	GWGCWC	1 cut(s)	1303
BsiSI	CCGG	2 cut(s)	784, 1296
BslI	CCNNNNNNNGG	4 cut(s)	194, 814, 1122, 1712
BsmAI	GTCTC	5 cut(s)	203, 239, 1463, 1784, 1795
BsmBI	CGTCTC	1 cut(s)	1463
BsnI	GGCC	4 cut(s)	328, 753, 771, 807
Bso31I	GGTCTC	3 cut(s)	203, 1784, 1795
Bsp1286I	GDGCHC	2 cut(s)	225, 1303
Bsp143I	GATC	8 cut(s)	121, 169, 1267, 1374, 1519, 1641, 1702, 1746
Bsp19I	CCATGG	1 cut(s)	1307
BspACI	CCGC	4 cut(s)	114, 165, 868, 1760
BspANI	GGCC	4 cut(s)	328, 753, 771, 807
BspCNI	CTCAG	6 cut(s)	221, 222, 387, 559, 937, 1363
BspDI	ATCGAT	1 cut(s)	880
BspFNI	CGCG	1 cut(s)	759
BspLI	GGNNCC	2 cut(s)	469, 1704
BspMI	ACCTGC	1 cut(s)	458
BspPI	GGATC	3 cut(s)	1514, 1697, 1710
BspQI	GCTCTTC	1 cut(s)	39
BspT107I	GGYRCC	1 cut(s)	467
BspTNI	GGTCTC	3 cut(s)	203, 1784, 1795
BsrDI	GCAATG	2 cut(s)	1326, 1685
BsrI	ACTGG	3 cut(s)	604, 650, 970
BssECI	CCNNGG	6 cut(s)	187, 651, 1307, 1467, 1710, 1711
BssMI	GATC	8 cut(s)	121, 169, 1267, 1374, 1519, 1641, 1702, 1746
BssNI	GRCGYC	2 cut(s)	309, 865
BssT1I	CCWWGG	1 cut(s)	1307
Bst2UI	CCWGG	5 cut(s)	189, 426, 1509, 1586, 1712
Bst4CI	ACNGT	3 cut(s)	344, 556, 1385
Bst6I	CTCTTC	2 cut(s)	39, 1550
BstACI	GRCGYC	2 cut(s)	309, 865
BstC8I	GCNNGC	5 cut(s)	359, 1086, 1165, 1611, 1781
BstDEI	CTNAG	8 cut(s)	208, 230, 330, 395, 567, 774, 945, 1371
BstDSI	CCRYGG	3 cut(s)	651, 1307, 1467
BstEII	GGTNACC	1 cut(s)	182
BstF5I	GGATG	7 cut(s)	391, 893, 1205, 1377, 1477, 1601, 1706
BstFNI	CGCG	1 cut(s)	759
BstHHI	GCGC	1 cut(s)	668
BstKTI	GATC	8 cut(s)	124, 172, 1270, 1377, 1522, 1644, 1705, 1749
BstMAI	GTCTC	5 cut(s)	203, 239, 1463, 1784, 1795
BstMBI	GATC	8 cut(s)	121, 169, 1267, 1374, 1519, 1641, 1702, 1746
BstMWI	GCNNNNNNNGC	2 cut(s)	625, 1766
BstNI	CCWGG	5 cut(s)	189, 426, 1509, 1586, 1712
BstNSI	RCATGY	2 cut(s)	1685, 1969
BstPI	GGTNACC	1 cut(s)	182
BstSCI	CCNGG	6 cut(s)	187, 424, 1294, 1507, 1584, 1710
BstSFI	CTRYAG	2 cut(s)	828, 1567
BstSLI	GKGCMC	1 cut(s)	1303
BstUI	CGCG	1 cut(s)	759
BstV1I	GCAGC	1 cut(s)	41
BstV2I	GAAGAC	3 cut(s)	162, 569, 1962
BstX2I	RGATCY	1 cut(s)	1702
BstYI	RGATCY	1 cut(s)	1702
Bsu15I	ATCGAT	1 cut(s)	880
BsuI	GTATCC	1 cut(s)	1833
BsuRI	GGCC	4 cut(s)	328, 753, 771, 807
BsuTUI	ATCGAT	1 cut(s)	880
BtgI	CCRYGG	3 cut(s)	651, 1307, 1467
BtrI	CACGTC	1 cut(s)	1390
BtsCI	GGATG	7 cut(s)	391, 893, 1205, 1377, 1477, 1601, 1706
BtsI	GCAGTG	3 cut(s)	1301, 1761, 1989
BtsIMutI	CAGTG	5 cut(s)	963, 1301, 1761, 1781, 1989
BveI	ACCTGC	1 cut(s)	458
Cac8I	GCNNGC	5 cut(s)	359, 1086, 1165, 1611, 1781
CaiI	CAGNNNCTG	5 cut(s)	215, 1094, 1141, 1780, 1943
CfoI	GCGC	1 cut(s)	668
Cfr13I	GGNCC	6 cut(s)	428, 648, 770, 887, 1582, 1919
ClaI	ATCGAT	1 cut(s)	880
CseI	GACGC	2 cut(s)	873, 1356
Csp6I	GTAC	3 cut(s)	83, 468, 700
CviQI	GTAC	3 cut(s)	83, 468, 700
DdeI	CTNAG	8 cut(s)	208, 230, 330, 395, 567, 774, 945, 1371
DpnI	GATC	8 cut(s)	123, 171, 1269, 1376, 1521, 1643, 1704, 1748
DpnII	GATC	8 cut(s)	121, 169, 1267, 1374, 1519, 1641, 1702, 1746
DraI	TTTAAA	1 cut(s)	1732
DrdI	GACNNNNNNGTC	1 cut(s)	1455
DseDI	GACNNNNNNGTC	1 cut(s)	1455
Eam1104I	CTCTTC	2 cut(s)	39, 1550
EarI	CTCTTC	2 cut(s)	39, 1550
EciI	GGCGGA	1 cut(s)	1775
Eco130I	CCWWGG	1 cut(s)	1307
Eco147I	AGGCCT	1 cut(s)	807
Eco24I	GRGCYC	1 cut(s)	225
Eco31I	GGTCTC	3 cut(s)	203, 1784, 1795
Eco32I	GATATC	1 cut(s)	1621
Eco47I	GGWCC	5 cut(s)	428, 648, 887, 1582, 1919
Eco57I	CTGAAG	1 cut(s)	146
Eco91I	GGTNACC	1 cut(s)	182
EcoO109I	RGGNCCY	1 cut(s)	770
EcoO65I	GGTNACC	1 cut(s)	182
EcoRII	CCWGG	5 cut(s)	187, 424, 1507, 1584, 1710
EcoRV	GATATC	1 cut(s)	1621
EcoT14I	CCWWGG	1 cut(s)	1307
EcoT22I	ATGCAT	1 cut(s)	1687
EcoT38I	GRGCYC	1 cut(s)	225
ErhI	CCWWGG	1 cut(s)	1307
Esp3I	CGTCTC	1 cut(s)	1463
FbaI	TGATCA	2 cut(s)	1267, 1746
FblI	GTMKAC	1 cut(s)	1236
Fnu4HI	GCNGC	2 cut(s)	30, 868
FokI	GGATG	7 cut(s)	398, 880, 1212, 1364, 1484, 1588, 1693
FriOI	GRGCYC	1 cut(s)	225
Fsp4HI	GCNGC	2 cut(s)	30, 868
FspBI	CTAG	1 cut(s)	1697
GlaI	GCGC	1 cut(s)	667
GluI	GCNGC	2 cut(s)	30, 868
GsuI	CTGGAG	3 cut(s)	237, 987, 1491
HaeIII	GGCC	4 cut(s)	328, 753, 771, 807
HapII	CCGG	2 cut(s)	784, 1296
HgaI	GACGC	2 cut(s)	873, 1356
HhaI	GCGC	1 cut(s)	668
Hin1I	GRCGYC	2 cut(s)	309, 865
Hin6I	GCGC	1 cut(s)	666
HinP1I	GCGC	1 cut(s)	666
HincII	GTYRAC	3 cut(s)	301, 320, 597
HindII	GTYRAC	3 cut(s)	301, 320, 597
HpaI	GTTAAC	1 cut(s)	301
HpaII	CCGG	2 cut(s)	784, 1296
HphI	GGTGA	7 cut(s)	283, 562, 568, 614, 973, 1468, 1926
Hpy166II	GTNNAC	8 cut(s)	301, 320, 391, 597, 1060, 1223, 1237, 1301
Hpy188I	TCNGA	6 cut(s)	126, 211, 526, 1372, 1677, 1726
Hpy188III	TCNNGA	6 cut(s)	216, 906, 933, 1141, 1412, 1523
Hpy8I	GTNNAC	8 cut(s)	301, 320, 391, 597, 1060, 1223, 1237, 1301
Hpy99I	CGWCG	3 cut(s)	314, 317, 867
HpyAV	CCTTC	6 cut(s)	535, 652, 787, 943, 1815, 1941
HpyCH4III	ACNGT	3 cut(s)	344, 556, 1385
HpyCH4IV	ACGT	3 cut(s)	309, 483, 1389
HpyF10VI	GCNNNNNNNGC	2 cut(s)	625, 1766
HpyF3I	CTNAG	8 cut(s)	208, 230, 330, 395, 567, 774, 945, 1371
HpySE526I	ACGT	3 cut(s)	309, 483, 1389
Hsp92I	GRCGYC	2 cut(s)	309, 865
HspAI	GCGC	1 cut(s)	666
KpnI	GGTACC	1 cut(s)	471
Ksp22I	TGATCA	2 cut(s)	1267, 1746
KspAI	GTTAAC	1 cut(s)	301
Kzo9I	GATC	8 cut(s)	121, 169, 1267, 1374, 1519, 1641, 1702, 1746
LguI	GCTCTTC	1 cut(s)	39
LmnI	GCTCC	3 cut(s)	366, 571, 1498
Lsp1109I	GCAGC	1 cut(s)	41
LweI	GCATC	3 cut(s)	911, 1190, 1639
MaeI	CTAG	1 cut(s)	1697
MaeII	ACGT	3 cut(s)	309, 483, 1389
MaeIII	GTNAC	7 cut(s)	182, 550, 1188, 1211, 1385, 1474, 1945
MalI	GATC	8 cut(s)	123, 171, 1269, 1376, 1521, 1643, 1704, 1748
MboI	GATC	8 cut(s)	121, 169, 1267, 1374, 1519, 1641, 1702, 1746
MfeI	CAATTG	3 cut(s)	109, 202, 1117
MflI	RGATCY	1 cut(s)	1702
MhlI	GDGCHC	2 cut(s)	225, 1303
MlyI	GAGTC	3 cut(s)	152, 221, 241
Mph1103I	ATGCAT	1 cut(s)	1687
MroXI	GAANNNNTTC	1 cut(s)	1245
MseI	TTAA	6 cut(s)	300, 435, 642, 1731, 1910, 1996
MslI	CAYNNNNRTG	3 cut(s)	1218, 1275, 1306
MspA1I	CMGCKG	1 cut(s)	1892
MspI	CCGG	2 cut(s)	784, 1296
MspR9I	CCNGG	6 cut(s)	189, 426, 1296, 1509, 1586, 1712
MunI	CAATTG	3 cut(s)	109, 202, 1117
MvaI	CCWGG	5 cut(s)	189, 426, 1509, 1586, 1712
MvnI	CGCG	1 cut(s)	759
MwoI	GCNNNNNNNGC	2 cut(s)	625, 1766
NciI	CCSGG	1 cut(s)	1296
NcoI	CCATGG	1 cut(s)	1307
NdeII	GATC	8 cut(s)	121, 169, 1267, 1374, 1519, 1641, 1702, 1746
NlaIV	GGNNCC	2 cut(s)	469, 1704
NmuCI	GTSAC	5 cut(s)	550, 1211, 1385, 1474, 1945
NsiI	ATGCAT	1 cut(s)	1687
NspI	RCATGY	2 cut(s)	1685, 1969
OliI	CACNNNNGTG	1 cut(s)	1218
PasI	CCCWGGG	1 cut(s)	1711
PceI	AGGCCT	1 cut(s)	807
PciSI	GCTCTTC	1 cut(s)	39
PcsI	WCGNNNNNNNCGW	1 cut(s)	1216
PdmI	GAANNNNTTC	1 cut(s)	1245
PfeI	GAWTC	7 cut(s)	281, 909, 1019, 1320, 1672, 1721, 1940
PflFI	GACNNNGTC	1 cut(s)	311
PkrI	GCNGC	2 cut(s)	31, 869
PleI	GAGTC	3 cut(s)	152, 220, 240
PpsI	GAGTC	3 cut(s)	152, 220, 240
PsiI	TTATAA	1 cut(s)	1530
Psp6I	CCWGG	5 cut(s)	187, 424, 1507, 1584, 1710
PspEI	GGTNACC	1 cut(s)	182
PspGI	CCWGG	5 cut(s)	187, 424, 1507, 1584, 1710
PspN4I	GGNNCC	2 cut(s)	469, 1704
PspPI	GGNCC	6 cut(s)	428, 648, 770, 887, 1582, 1919
PstNI	CAGNNNCTG	5 cut(s)	215, 1094, 1141, 1780, 1943
PsuI	RGATCY	1 cut(s)	1702
PsyI	GACNNNGTC	1 cut(s)	311
PvuII	CAGCTG	1 cut(s)	1892
RsaI	GTAC	3 cut(s)	84, 469, 701
RsaNI	GTAC	3 cut(s)	83, 468, 700
RseI	CAYNNNNRTG	3 cut(s)	1218, 1275, 1306
SapI	GCTCTTC	1 cut(s)	39
SaqAI	TTAA	6 cut(s)	300, 435, 642, 1731, 1910, 1996
SatI	GCNGC	2 cut(s)	30, 868
Sau3AI	GATC	8 cut(s)	121, 169, 1267, 1374, 1519, 1641, 1702, 1746
Sau96I	GGNCC	6 cut(s)	428, 648, 770, 887, 1582, 1919
SchI	GAGTC	3 cut(s)	152, 221, 241
ScrFI	CCNGG	6 cut(s)	189, 426, 1296, 1509, 1586, 1712
SduI	GDGCHC	2 cut(s)	225, 1303
SfaNI	GCATC	3 cut(s)	911, 1190, 1639
SfcI	CTRYAG	2 cut(s)	828, 1567
SinI	GGWCC	5 cut(s)	428, 648, 887, 1582, 1919
SmiMI	CAYNNNNRTG	3 cut(s)	1218, 1275, 1306
SseBI	AGGCCT	1 cut(s)	807
SsiI	CCGC	4 cut(s)	114, 165, 868, 1760
SspI	AATATT	1 cut(s)	176
SspMI	CTAG	1 cut(s)	1697
StuI	AGGCCT	1 cut(s)	807
StyD4I	CCNGG	6 cut(s)	187, 424, 1294, 1507, 1584, 1710
StyI	CCWWGG	1 cut(s)	1307
TaaI	ACNGT	3 cut(s)	344, 556, 1385
TaiI	ACGT	3 cut(s)	312, 486, 1392
TaqI	TCGA	5 cut(s)	880, 907, 1017, 1318, 1633
TaqII	GACCGA	2 cut(s)	305, 1808
TauI	GCSGC	1 cut(s)	870
TfiI	GAWTC	7 cut(s)	281, 909, 1019, 1320, 1672, 1721, 1940
Tru1I	TTAA	6 cut(s)	300, 435, 642, 1731, 1910, 1996
Tru9I	TTAA	6 cut(s)	300, 435, 642, 1731, 1910, 1996
TscAI	CASTG	5 cut(s)	970, 1308, 1761, 1781, 1996
TseFI	GTSAC	5 cut(s)	550, 1211, 1385, 1474, 1945
TseI	GCWGC	1 cut(s)	29
Tsp45I	GTSAC	5 cut(s)	550, 1211, 1385, 1474, 1945
TspGWI	ACGGA	2 cut(s)	1064, 1484
TspRI	CASTG	5 cut(s)	970, 1308, 1761, 1781, 1996
Tth111I	GACNNNGTC	1 cut(s)	311
VneI	GTGCAC	1 cut(s)	1299
VpaK11BI	GGWCC	5 cut(s)	428, 648, 887, 1582, 1919
XceI	RCATGY	2 cut(s)	1685, 1969
XcmI	CCANNNNNNNNNTGG	1 cut(s)	451
XmiI	GTMKAC	1 cut(s)	1236
XmnI	GAANNNNTTC	1 cut(s)	1245
XspI	CTAG	1 cut(s)	1697
ZraI	GACGTC	1 cut(s)	310
Zsp2I	ATGCAT	1 cut(s)	1687

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.