RH7CG077800

Wall-associated receptor kinase C-terminal

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
OG0000786
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG077800.1

Sequence Viewer

Length: 1248 bp
ATGTCATCACCTATCTCTTACCTCCTTGCAGCTCTTCTCTCACTCTTGTTATTCAACTTCCATGGAGGCAAAGCCAACTTTGTACCCACAACAAATTGCTCCATATACAATTGTGGTAAAGGCCCTGATTTTCACTACCCTTTTTGGAAAATTGAAGACTCCACCGCCGATCAATATTGTGGCTACCCTGGTTTTGGTCTCAATTGCTCAGAGTCCGGAAAGCCAATACTCAGTCTCCCAAATAATGACTCCTATTATGTGAAAGACATAAACTTTACTGACTCCACCATCACCCTTGTTTACATCGACGTCGTCGATCAACAATGCCCTAGGGCAAGACACAGTATCAGTGTAGGCACGCTCCCATTGGATTATTCCCCATTGGATATGAACCTGAGCTTCTACTTCAACTGCACTTCCTTTCCTGATCCTTTTAAGCCTCCCAAAACCTGCTCGGGATTAGATGGTACCATAAAGTCTTATGTAATCACTGAGGGAGAGCAGCCACGTTGGTTTGAGTGGTCTGAAAGTTGTGAGGAGAATGTGGTGGTGACGGTGATGAAGACTGAGGAGCTTTATATTTTTATTGGTGAGTTGACTGGTGATTTTGGAGAGCTTATGAAGCAGGGGTTTGTGCTTAACTGGACCACGGCGAAGGAGTGCGCTTCGTGTGAGAGTGGTGGTGGTTTGTGTGGGTACAAGTACAACCCCACTAAAGCTGATGAGTTTCTCTGCTTCCGCAAACATAGTGATGGCCTACGCGAGAAGAAAGGCCCTAAGCTCAACCGGAGATTGAAGGTTGTCTTAGGCCTTTGCTCGGTTATTGGAACTATAGCTGTAATGTGCTTAATTTTCTTTATATGGCGACGCCGCAACAGAAATCGATATGGTCCATCATCCTACGCATCTCGAATCATCTATTCTAAAAGCTATTCCAGAAGTGATACTGAGAAGGAAAGTGCATACACTGGAGTTCATGTATTCACCTACAATGAACTTGAACAAGCAACAAACTATTTCGATTCATCTAAAGAACTTGGTGGTGGAGGCTTTGGCAGAGTTTACTATGGTAAACTAATATTCAACGATTTTCTATCTTCAAGATCACAAAGTTGTGTTTTAACCATTATAATACGAACCTCGTTCATTATATATGGTTTCCTCAAACAGGAAAAGTCCGTGATGGGCGAGCAGTTGCTGTCAAGCGACTATATGAAACCAATTGCAGGAGAGTTGAGCAGTTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind WAK_assoc

Protein Analysis

415

Amino Acids

46.68

Weight (kDa)

6.54

Isoelectric Point (pI)

43.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 33 - 100 5e-17 Wall-associated receptor kinase galacturonan-binding
WAK_assoc PF14380 156 - 247 2.5e-15 Wall-associated receptor kinase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1130
AatII GACGTC 1 cut(s) 312
Acc36I ACCTGC 1 cut(s) 458
Acc65I GGTACC 1 cut(s) 467
AccB1I GGYRCC 1 cut(s) 467
AccII CGCG 1 cut(s) 762
AccIII TCCGGA 1 cut(s) 215
AciI CCGC 3 cut(s) 165, 739, 871
AclWI GGATC 1 cut(s) 422
AcyI GRCGYC 2 cut(s) 309, 868
AfaI GTAC 4 cut(s) 84, 469, 698, 704
AfiI CCNNNNNNNGG 4 cut(s) 194, 817, 1168, 1226
AgsI TTSAA 7 cut(s) 55, 155, 409, 796, 1001, 1084, 1101
AjnI CCWGG 1 cut(s) 187
AluBI AGCT 8 cut(s) 32, 399, 574, 616, 719, 781, 836, 930
AluI AGCT 8 cut(s) 32, 399, 574, 616, 719, 781, 836, 930
Alw26I GTCTC 2 cut(s) 203, 239
AlwI GGATC 1 cut(s) 422
AlwNI CAGNNNCTG 2 cut(s) 1198, 1245
Ama87I CYCGRG 1 cut(s) 454
Aor13HI TCCGGA 1 cut(s) 215
AoxI GGCC 4 cut(s) 121, 754, 772, 808
ApeKI GCWGC 2 cut(s) 29, 502
Asp718I GGTACC 1 cut(s) 467
AspA2I CCTAGG 1 cut(s) 329
AspLEI GCGC 1 cut(s) 665
AspS9I GGNCC 4 cut(s) 122, 645, 773, 890
AsuHPI GGTGA 6 cut(s) 283, 562, 568, 602, 614, 976
AvaI CYCGRG 1 cut(s) 454
AvaII GGWCC 2 cut(s) 645, 890
AvrII CCTAGG 1 cut(s) 329
BanI GGYRCC 1 cut(s) 467
BbsI GAAGAC 2 cut(s) 162, 569
BbvI GCAGC 2 cut(s) 41, 514
BccI CCATC 5 cut(s) 296, 458, 746, 901, 1177
BceAI ACGGC 1 cut(s) 666
BciT130I CCWGG 1 cut(s) 189
BcoDI GTCTC 2 cut(s) 203, 239
BfaI CTAG 1 cut(s) 330
BfmI CTRYAG 1 cut(s) 831
BfuAI ACCTGC 1 cut(s) 458
BisI GCNGC 3 cut(s) 30, 503, 871
BlnI CCTAGG 1 cut(s) 329
BlsI GCNGC 3 cut(s) 31, 504, 872
Bme1390I CCNGG 1 cut(s) 189
Bme18I GGWCC 2 cut(s) 645, 890
BmeT110I CYCGRG 1 cut(s) 454
BmgT120I GGNCC 4 cut(s) 122, 645, 773, 890
BmiI GGNNCC 1 cut(s) 469
BmrFI CCNGG 1 cut(s) 189
BmsI GCATC 1 cut(s) 914
BpiI GAAGAC 2 cut(s) 162, 569
BpmI CTGGAG 1 cut(s) 990
Bpu10I CCTNAGC 2 cut(s) 395, 777
Bsa29I ATCGAT 1 cut(s) 883
BsaHI GRCGYC 2 cut(s) 309, 868
BsaI GGTCTC 1 cut(s) 203
BsaJI CCNNGG 4 cut(s) 61, 187, 329, 648
BsaWI WCCGGW 2 cut(s) 215, 786
BsaXI ACNNNNNCTCC 4 cut(s) 219, 249, 963, 993
Bsc4I CCNNNNNNNGG 4 cut(s) 194, 817, 1168, 1226
Bse1I ACTGG 3 cut(s) 604, 647, 973
BseAI TCCGGA 1 cut(s) 215
BseBI CCWGG 1 cut(s) 189
BseCI ATCGAT 1 cut(s) 883
BseDI CCNNGG 4 cut(s) 61, 187, 329, 648
BseGI GGATG 1 cut(s) 896
BseLI CCNNNNNNNGG 4 cut(s) 194, 817, 1168, 1226
BseMII CTCAG 6 cut(s) 222, 244, 386, 483, 558, 939
BseNI ACTGG 3 cut(s) 604, 647, 973
BseRI GAGGAG 2 cut(s) 551, 584
BseXI GCAGC 2 cut(s) 41, 514
BsgI GTGCAG 1 cut(s) 397
Bsh1236I CGCG 1 cut(s) 762
BshFI GGCC 4 cut(s) 123, 756, 774, 810
BshNI GGYRCC 1 cut(s) 467
BshVI ATCGAT 1 cut(s) 883
BsiHKCI CYCGRG 1 cut(s) 454
BsiSI CCGG 2 cut(s) 216, 787
BslI CCNNNNNNNGG 4 cut(s) 194, 817, 1168, 1226
BsmAI GTCTC 2 cut(s) 203, 239
BsnI GGCC 4 cut(s) 123, 756, 774, 810
Bso31I GGTCTC 1 cut(s) 203
BsoBI CYCGRG 1 cut(s) 454
Bsp13I TCCGGA 1 cut(s) 215
Bsp143I GATC 4 cut(s) 169, 316, 427, 1103
Bsp19I CCATGG 1 cut(s) 61
BspACI CCGC 3 cut(s) 165, 739, 871
BspANI GGCC 4 cut(s) 123, 756, 774, 810
BspCNI CTCAG 6 cut(s) 221, 243, 387, 484, 559, 940
BspDI ATCGAT 1 cut(s) 883
BspEI TCCGGA 1 cut(s) 215
BspFNI CGCG 1 cut(s) 762
BspLI GGNNCC 1 cut(s) 469
BspMI ACCTGC 1 cut(s) 458
BspPI GGATC 1 cut(s) 422
BspQI GCTCTTC 1 cut(s) 39
BspT107I GGYRCC 1 cut(s) 467
BspTNI GGTCTC 1 cut(s) 203
BsrI ACTGG 3 cut(s) 604, 647, 973
BssECI CCNNGG 4 cut(s) 61, 187, 329, 648
BssMI GATC 4 cut(s) 169, 316, 427, 1103
BssNI GRCGYC 2 cut(s) 309, 868
BssT1I CCWWGG 2 cut(s) 61, 329
Bst2UI CCWGG 1 cut(s) 189
Bst4CI ACNGT 2 cut(s) 344, 556
Bst6I CTCTTC 1 cut(s) 39
BstACI GRCGYC 2 cut(s) 309, 868
BstC8I GCNNGC 2 cut(s) 359, 1190
BstDEI CTNAG 8 cut(s) 208, 230, 395, 492, 567, 777, 805, 948
BstDSI CCRYGG 2 cut(s) 61, 648
BstENI CCTNNNNNAGG 1 cut(s) 1166
BstF5I GGATG 1 cut(s) 896
BstFNI CGCG 1 cut(s) 762
BstHHI GCGC 1 cut(s) 665
BstKTI GATC 4 cut(s) 172, 319, 430, 1106
BstMAI GTCTC 2 cut(s) 203, 239
BstMBI GATC 4 cut(s) 169, 316, 427, 1103
BstMWI GCNNNNNNNGC 1 cut(s) 622
BstNI CCWGG 1 cut(s) 189
BstSCI CCNGG 1 cut(s) 187
BstSFI CTRYAG 1 cut(s) 831
BstUI CGCG 1 cut(s) 762
BstV1I GCAGC 2 cut(s) 41, 514
BstV2I GAAGAC 2 cut(s) 162, 569
Bsu15I ATCGAT 1 cut(s) 883
BsuRI GGCC 4 cut(s) 123, 756, 774, 810
BsuTUI ATCGAT 1 cut(s) 883
BtgI CCRYGG 2 cut(s) 61, 648
BtsCI GGATG 1 cut(s) 896
BtsIMutI CAGTG 3 cut(s) 355, 489, 966
BveI ACCTGC 1 cut(s) 458
Cac8I GCNNGC 2 cut(s) 359, 1190
CaiI CAGNNNCTG 2 cut(s) 1198, 1245
CfoI GCGC 1 cut(s) 665
Cfr13I GGNCC 4 cut(s) 122, 645, 773, 890
ClaI ATCGAT 1 cut(s) 883
CseI GACGC 1 cut(s) 876
Csp6I GTAC 4 cut(s) 83, 468, 697, 703
CviAII CATG 2 cut(s) 62, 977
CviQI GTAC 4 cut(s) 83, 468, 697, 703
DdeI CTNAG 8 cut(s) 208, 230, 395, 492, 567, 777, 805, 948
DpnI GATC 4 cut(s) 171, 318, 429, 1105
DpnII GATC 4 cut(s) 169, 316, 427, 1103
Eam1104I CTCTTC 1 cut(s) 39
EarI CTCTTC 1 cut(s) 39
Eco130I CCWWGG 2 cut(s) 61, 329
Eco147I AGGCCT 1 cut(s) 810
Eco31I GGTCTC 1 cut(s) 203
Eco47I GGWCC 2 cut(s) 645, 890
Eco88I CYCGRG 1 cut(s) 454
EcoNI CCTNNNNNAGG 1 cut(s) 1166
EcoO109I RGGNCCY 2 cut(s) 122, 773
EcoRII CCWGG 1 cut(s) 187
EcoT14I CCWWGG 2 cut(s) 61, 329
ErhI CCWWGG 2 cut(s) 61, 329
FaeI CATG 2 cut(s) 65, 980
FalI AAGNNNNNCTT 2 cut(s) 788, 820
FatI CATG 2 cut(s) 61, 976
Fnu4HI GCNGC 3 cut(s) 30, 503, 871
FokI GGATG 1 cut(s) 883
Fsp4HI GCNGC 3 cut(s) 30, 503, 871
FspBI CTAG 1 cut(s) 330
GlaI GCGC 1 cut(s) 664
GluI GCNGC 3 cut(s) 30, 503, 871
GsuI CTGGAG 1 cut(s) 990
HaeIII GGCC 4 cut(s) 123, 756, 774, 810
HapII CCGG 2 cut(s) 216, 787
HgaI GACGC 1 cut(s) 876
HhaI GCGC 1 cut(s) 665
Hin1I GRCGYC 2 cut(s) 309, 868
Hin1II CATG 2 cut(s) 65, 980
Hin6I GCGC 1 cut(s) 663
HinP1I GCGC 1 cut(s) 663
HincII GTYRAC 1 cut(s) 597
HindII GTYRAC 1 cut(s) 597
HinfI GANTC 6 cut(s) 158, 212, 248, 281, 912, 1022
HpaII CCGG 2 cut(s) 216, 787
HphI GGTGA 6 cut(s) 283, 562, 568, 602, 614, 976
Hpy166II GTNNAC 4 cut(s) 301, 597, 1063, 1073
Hpy188I TCNGA 2 cut(s) 211, 526
Hpy188III TCNNGA 7 cut(s) 216, 425, 456, 909, 936, 1101, 1245
Hpy8I GTNNAC 4 cut(s) 301, 597, 1063, 1073
Hpy99I CGWCG 4 cut(s) 311, 314, 317, 870
HpyAV CCTTC 3 cut(s) 649, 790, 946
HpyCH4III ACNGT 2 cut(s) 344, 556
HpyCH4IV ACGT 2 cut(s) 309, 508
HpyCH4V TGCA 4 cut(s) 29, 414, 962, 1226
HpyF10VI GCNNNNNNNGC 1 cut(s) 622
HpyF3I CTNAG 8 cut(s) 208, 230, 395, 492, 567, 777, 805, 948
HpySE526I ACGT 2 cut(s) 309, 508
Hsp92I GRCGYC 2 cut(s) 309, 868
Hsp92II CATG 2 cut(s) 65, 980
HspAI GCGC 1 cut(s) 663
Kpn2I TCCGGA 1 cut(s) 215
KpnI GGTACC 1 cut(s) 471
Kzo9I GATC 4 cut(s) 169, 316, 427, 1103
LguI GCTCTTC 1 cut(s) 39
LmnI GCTCC 3 cut(s) 104, 366, 571
Lsp1109I GCAGC 2 cut(s) 41, 514
LweI GCATC 1 cut(s) 914
MaeI CTAG 1 cut(s) 330
MaeII ACGT 2 cut(s) 309, 508
MaeIII GTNAC 1 cut(s) 550
MalI GATC 4 cut(s) 171, 318, 429, 1105
MboI GATC 4 cut(s) 169, 316, 427, 1103
MboII GAAGA 5 cut(s) 26, 167, 574, 778, 1089
MfeI CAATTG 3 cut(s) 109, 202, 1221
MluCI AATT 6 cut(s) 94, 109, 150, 202, 849, 1221
MlyI GAGTC 4 cut(s) 152, 221, 242, 275
MnlI CCTC 9 cut(s) 32, 59, 450, 487, 529, 562, 1040, 1150, 1172
MroI TCCGGA 1 cut(s) 215
MseI TTAA 4 cut(s) 435, 639, 848, 1121
MslI CAYNNNNRTG 1 cut(s) 750
MspI CCGG 2 cut(s) 216, 787
MspR9I CCNGG 1 cut(s) 189
MunI CAATTG 3 cut(s) 109, 202, 1221
MvaI CCWGG 1 cut(s) 189
MvnI CGCG 1 cut(s) 762
MwoI GCNNNNNNNGC 1 cut(s) 622
NcoI CCATGG 1 cut(s) 61
NdeII GATC 4 cut(s) 169, 316, 427, 1103
NlaIII CATG 2 cut(s) 65, 980
NlaIV GGNNCC 1 cut(s) 469
NmuCI GTSAC 1 cut(s) 550
PceI AGGCCT 1 cut(s) 810
PciSI GCTCTTC 1 cut(s) 39
PcsI WCGNNNNNNNCGW 1 cut(s) 312
PfeI GAWTC 2 cut(s) 912, 1022
PflFI GACNNNGTC 1 cut(s) 311
PkrI GCNGC 3 cut(s) 31, 504, 872
PleI GAGTC 4 cut(s) 152, 220, 242, 275
PpsI GAGTC 4 cut(s) 152, 220, 242, 275
PsiI TTATAA 1 cut(s) 1130
Psp6I CCWGG 1 cut(s) 187
PspGI CCWGG 1 cut(s) 187
PspN4I GGNNCC 1 cut(s) 469
PspPI GGNCC 4 cut(s) 122, 645, 773, 890
PstNI CAGNNNCTG 2 cut(s) 1198, 1245
PsyI GACNNNGTC 1 cut(s) 311
RsaI GTAC 4 cut(s) 84, 469, 698, 704
RsaNI GTAC 4 cut(s) 83, 468, 697, 703
RseI CAYNNNNRTG 1 cut(s) 750
SapI GCTCTTC 1 cut(s) 39
SaqAI TTAA 4 cut(s) 435, 639, 848, 1121
SatI GCNGC 3 cut(s) 30, 503, 871
Sau3AI GATC 4 cut(s) 169, 316, 427, 1103
Sau96I GGNCC 4 cut(s) 122, 645, 773, 890
SchI GAGTC 4 cut(s) 152, 221, 242, 275
ScrFI CCNGG 1 cut(s) 189
SfaNI GCATC 1 cut(s) 914
SfcI CTRYAG 1 cut(s) 831
SinI GGWCC 2 cut(s) 645, 890
SmiMI CAYNNNNRTG 1 cut(s) 750
Sse9I AATT 6 cut(s) 94, 109, 150, 202, 849, 1221
SseBI AGGCCT 1 cut(s) 810
SsiI CCGC 3 cut(s) 165, 739, 871
SspI AATATT 2 cut(s) 176, 1080
SspMI CTAG 1 cut(s) 330
StuI AGGCCT 1 cut(s) 810
StyD4I CCNGG 1 cut(s) 187
StyI CCWWGG 2 cut(s) 61, 329
TaaI ACNGT 2 cut(s) 344, 556
TaiI ACGT 2 cut(s) 312, 511
TaqI TCGA 5 cut(s) 306, 315, 883, 910, 1020
TasI AATT 6 cut(s) 94, 109, 150, 202, 849, 1221
TatI WGTACW 1 cut(s) 702
TauI GCSGC 1 cut(s) 873
TfiI GAWTC 2 cut(s) 912, 1022
Tru1I TTAA 4 cut(s) 435, 639, 848, 1121
Tru9I TTAA 4 cut(s) 435, 639, 848, 1121
TscAI CASTG 3 cut(s) 355, 496, 973
TseFI GTSAC 1 cut(s) 550
TseI GCWGC 2 cut(s) 29, 502
Tsp45I GTSAC 1 cut(s) 550
TspDTI ATGAA 8 cut(s) 404, 575, 635, 965, 1008, 1014, 1135, 1229
TspGWI ACGGA 1 cut(s) 1168
TspRI CASTG 3 cut(s) 355, 496, 973
Tth111I GACNNNGTC 1 cut(s) 311
VpaK11BI GGWCC 2 cut(s) 645, 890
XagI CCTNNNNNAGG 1 cut(s) 1166
XmaJI CCTAGG 1 cut(s) 329
XspI CTAG 1 cut(s) 330
ZraI GACGTC 1 cut(s) 310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.