Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005665.1

Orthogroup ID

OG0000786

Physical Location & Seq

Genomic Coordinates Forward (+)

3782 .. 8741

Gene Structure 4960 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005665.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

atgcctaataatcatcatctcttcctaagatcaccacccatcatcatcatcatcatcatcttcttcttcttcttcttctgggctcgctgcgaagacgatccccaatattacacacggtgcaagcaacctttcaattgtggtaacctcacagacatatcctaccctttctggggaggacccaatcgccccaaacagtgcggtcgcttgggcttcgagctcaccaactgcgaagatgaaactcaatcccctcacatagtaatagaaaagctagaatttcatgtgtccaacatcaacagccaagagctctttcacaccatgacaatcgctcgctccgacctcttggatagtccttgtactgaccacctcgtcaacaccactctcgactacaaccgtttctcttatgtccaaactgttcgcaacctcaccttgtactacggctgcctcttcttcttcttcttctgggctcgcggcgaagacgatccccaatattacacagggtgcaagcaacctttcaattgtggtaacctcacaaacatatcctaccctttctggggaggacccaatcgcccccaagagtgcggtcgcttaggcttcgaactcaccaactgcgaagatgaaactcaatcccctcacatagtaatagaaaagctagaatttcatgtgtccaacatcgacagccaagatcttcttcacaccatgacaatcgctcgctccgacctctgggacagtccttgtactggcctcctcgtcaacaccactctcgactacaaccgtttctcttatgtccaaactgttcgcaacctcaccttgtactacggctgcctccctcaaaacgaatcggtcctcaacaattttacgtgcaaaatagacggcacagctaaggatagaaatatttcgtactacgtggatgattcactctcaagggttgatgttccgggccgacccacatgttctaccaaaatcatagtccccattttttgggagggctttgatgtaatgccagacaatgcaacggaagaagtggaaaaagttttgaagcaagggtttcaggttgagtacagcgcggattgggatctctgtaggtcatgcatgaactctaatggcacctgtggatcgaacgcaacgacggattcgtttctctgcctttgcgggaatcgtcctaacaattctacttgtccaattgttcatgactctaggttcagctggaaattgaaggttgtcgtaggtctttgctcggttattggaactatagccgtaatgtgcttcattttctttatatggcgacgccgcaacagaaatcgatatggtccatcatcctatgcatctcgaagcatctattctaaaagctattccagaagtgatactgagaagggaagtgcataccttggagttcatgtcttcacctacaaggaacttgaacaagcaacaaactatttcgactcctcaaaagaaattggggatggaggctttggcacagtgtactatggaaaagttcgtgatgggcgatcagttgctgtcaagcgtctttacgaaaccaattacaagagagttgagcagttcatgaatgaaatcgagattttagctcgcctacgccaccaaaaccttgtcttactctatggatgcacctctcgtcacagccgtgaactcctccttgtctatgaatatgttcccaacggaactcttgctgatcatcttcaaggtggaaaagcaaaacccggtgcactgccatggcatactcgaatcaacattgccgtagaaactgcaagtgcattgtcctatctccatgcgtctgagatcatccaccgcgatgtgaaaaccactaacattctccttgacaacaatttctgtgtcaaagtagcagattttggactgtctcgtctcttccccacggatgtcacccatatctcaactgctccacaaggaactccgggttatgttgatcccgattataaccaatgctaccagcttactgcgaagagtgatgtctatagcttcggtgtggtcctggttgaactcatatcatccttgcctgctgttgatatcacaaggcatagacatgagatcaatttgtcgaacatggctatcaacaaaattcagaaacatgcattgcatgagctagtggatccatccctcgggtatgaatcagactttaaagtaagaaaaatgatcaatgcagtggcggaattagcgtttcagtgcctgcaaagtgagactgaaatgagaccttctatggttgatgtggaaaatgaactaaagaggatacagagtgatgattttagtaaagaaaaggcagaggaaattgatatttcagctgatgatgttgtgccgttaaagagtggtcctctgccaccttcaccagattctgtgacaataaattgggttagcaagtcttcaacaccaaatgatagcactggttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010228 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023052 GO:0031668 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0036211 GO:0042221 GO:0042631 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061458 GO:0065007 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071462 GO:0071495 GO:0071496 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0104004 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

GUB_WAK_bind Pkinase Pkinase_Tyr WAK_assoc

Protein Analysis

805

Amino Acids

91.58

Weight (kDa)

5.69

Isoelectric Point (pI)

47.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000786)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18390 AT1G18390
fragaria_vesca	FvH4_5g11760 FvH4_5g11760 FvH4_5g11790
malus_domestica	MD06G1218900.v1.1 MD06G1219200.v1.1 MD14G1228700.v1.1
prunus_persica	Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1 Prupe.5G223900_v2.0.a1
pyrus_communis	pycom06g19560 pycom06g19580 pycom14g19000
rosa_chinensis	RchiOBHm_Chr7g0185891 RchiOBHm_Chr7g0185941 RchiOBHm_Chr7g0185971 RchiOBHm_Chr7g0186001 RchiOBHm_Chr7g0186021 RchiOBHm_Chr7g0209991 RchiOBHm_Chr7g0210001
rosa_laevigata	RLG00000003071 RLG00000004872 RLG00000004873 RLG00000004875 RLG00000005413
rosa_multiflora	Rmu_co8007212.1_g000001 Rmu_co8076798.1_g000001 Rmu_sc0000194.1_g000013 Rmu_sc0000194.1_g000017 Rmu_sc0000194.1_g000019 Rmu_sc0004509.1_g000017 Rmu_sc0004509.1_g000018 Rmu_sc0005665.1_g000002 Rmu_sc0005665.1_g000004 Rmu_sc0005665.1_g000020 Rmu_sc0005665.1_g000023 Rmu_sc0005665.1_g000035
rosa_roxburghii	Rroxscaffold_1G00039510 Rroxscaffold_3G00248670 Rroxscaffold_3G00257880 Rroxscaffold_3G00268500 Rroxscaffold_3G00268510 Rroxscaffold_3G00268530 Rroxscaffold_3G00268580
rosa_rugosa	Rorug06G0471800 Rorug07G0117900
rosa_samantha	Rh1BG104700 Rh4CG290300 Rh7AG070300 Rh7AG070400 Rh7AG070600 Rh7AG251700 Rh7BG086300 Rh7BG086400 Rh7BG246300 Rh7CG077400 Rh7CG077800 Rh7CG078000 Rh7CG268500 Rh7DG077400 Rh7DG077600 Rh7DG077900 Rh7DG078000 Rh7DG258500
rosa_wichuraiana	Rw7G006440 Rw7G006470 Rw7G006480 Rw7G021370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1950
AasI	GACNNNNNNGTC	2 cut(s)	365, 1875
AccB1I	GGYRCC	1 cut(s)	1103
AccB7I	CCANNNNNTGG	1 cut(s)	978
AccII	CGCG	3 cut(s)	468, 1064, 1806
AciI	CCGC	8 cut(s)	198, 468, 579, 1064, 1149, 1288, 1804, 2180
AclWI	GGATC	7 cut(s)	92, 473, 1080, 1120, 1934, 2117, 2130
AcsI	RAATTY	3 cut(s)	272, 653, 2091
AcyI	GRCGYC	1 cut(s)	1285
AdeI	CACNNNGTG	2 cut(s)	117, 498
AfaI	GTAC	7 cut(s)	355, 431, 736, 812, 899, 1058, 1481
AfiI	CCNNNNNNNGG	8 cut(s)	169, 170, 550, 551, 720, 737, 978, 2132
AflIII	ACRYGT	1 cut(s)	947
AgsI	TTSAA	8 cut(s)	133, 514, 1036, 1213, 1418, 1697, 2012, 2394
AjnI	CCWGG	1 cut(s)	2004
AjuI	GAANNNNNNNTTGG	4 cut(s)	291, 323, 672, 704
AleI	CACNNNNGTG	1 cut(s)	1638
Alw21I	GWGCWC	3 cut(s)	219, 306, 1723
Alw26I	GTCTC	4 cut(s)	1878, 1883, 2204, 2215
Alw44I	GTGCAC	1 cut(s)	1719
AlwI	GGATC	7 cut(s)	92, 473, 1080, 1120, 1934, 2117, 2130
AlwNI	CAGNNNCTG	3 cut(s)	1514, 2200, 2363
Ama87I	CYCGRG	1 cut(s)	2132
AoxI	GGCC	2 cut(s)	739, 937
ApaLI	GTGCAC	1 cut(s)	1719
ApeKI	GCWGC	3 cut(s)	87, 438, 819
ApoI	RAATTY	3 cut(s)	272, 653, 2091
ArsI	GACNNNNNNTTYG	2 cut(s)	951, 983
Asp700I	GAANNNNTTC	2 cut(s)	892, 1665
AspLEI	GCGC	1 cut(s)	1064
AspS9I	GGNCC	7 cut(s)	176, 557, 841, 937, 1307, 2002, 2339
AsuC2I	CCSGG	3 cut(s)	936, 1716, 1929
AsuHPI	GGTGA	8 cut(s)	24, 211, 415, 592, 796, 1393, 1888, 2346
AsuII	TTCGAA	1 cut(s)	594
AvaI	CYCGRG	1 cut(s)	2132
AvaII	GGWCC	6 cut(s)	176, 557, 841, 1307, 2002, 2339
BaeGI	GKGCMC	1 cut(s)	1723
BamHI	GGATCC	1 cut(s)	2122
BanI	GGYRCC	1 cut(s)	1103
BanII	GRGCYC	4 cut(s)	85, 219, 306, 466
BbsI	GAAGAC	4 cut(s)	99, 480, 1390, 2382
Bbv12I	GWGCWC	3 cut(s)	219, 306, 1723
BbvI	GCAGC	3 cut(s)	74, 425, 806
BccI	CCATC	5 cut(s)	47, 1318, 1454, 1493, 2134
BceAI	ACGGC	7 cut(s)	451, 832, 886, 1238, 1623, 1736, 2311
BciT130I	CCWGG	1 cut(s)	2006
BciVI	GTATCC	1 cut(s)	2253
BclI	TGATCA	2 cut(s)	1687, 2166
BcnI	CCSGG	3 cut(s)	936, 1716, 1929
BcoDI	GTCTC	4 cut(s)	1878, 1883, 2204, 2215
BfaI	CTAG	4 cut(s)	269, 650, 1194, 2117
BfmI	CTRYAG	3 cut(s)	1078, 1248, 1987
BfuI	GTATCC	1 cut(s)	2253
BglII	AGATCT	1 cut(s)	682
BisI	GCNGC	5 cut(s)	88, 439, 469, 820, 1288
BlsI	GCNGC	5 cut(s)	89, 440, 470, 821, 1289
Bme1390I	CCNGG	4 cut(s)	936, 1716, 1929, 2006
Bme18I	GGWCC	6 cut(s)	176, 557, 841, 1307, 2002, 2339
BmeT110I	CYCGRG	1 cut(s)	2132
BmgT120I	GGNCC	7 cut(s)	176, 557, 841, 937, 1307, 2002, 2339
BmiI	GGNNCC	4 cut(s)	178, 559, 1105, 2124
BmrFI	CCNGG	4 cut(s)	936, 1716, 1929, 2006
BmsI	GCATC	3 cut(s)	1331, 1341, 1610
BpiI	GAAGAC	4 cut(s)	99, 480, 1390, 2382
BplI	GAGNNNNNCTC	2 cut(s)	2326, 2358
Bpu10I	CCTNAGC	2 cut(s)	586, 879
Bpu14I	TTCGAA	1 cut(s)	594
BpuEI	CTTGAG	1 cut(s)	904
BpuMI	CCSGG	3 cut(s)	936, 1716, 1929
Bsa29I	ATCGAT	1 cut(s)	1300
BsaAI	YACGTR	2 cut(s)	858, 904
BsaBI	GATNNNNATC	1 cut(s)	1071
BsaHI	GRCGYC	1 cut(s)	1285
BsaI	GGTCTC	1 cut(s)	2215
BsaJI	CCNNGG	4 cut(s)	1384, 1727, 1887, 2131
BsaXI	ACNNNNNCTCC	2 cut(s)	1380, 1410
Bsc4I	CCNNNNNNNGG	8 cut(s)	169, 170, 550, 551, 720, 737, 978, 2132
Bse1I	ACTGG	2 cut(s)	742, 2416
Bse3DI	GCAATG	2 cut(s)	1746, 2105
Bse8I	GATNNNNATC	1 cut(s)	1071
BseBI	CCWGG	1 cut(s)	2006
BseCI	ATCGAT	1 cut(s)	1300
BseDI	CCNNGG	4 cut(s)	1384, 1727, 1887, 2131
BseGI	GGATG	8 cut(s)	913, 1313, 1465, 1625, 1797, 1897, 2021, 2126
BseJI	GATNNNNATC	1 cut(s)	1071
BseLI	CCNNNNNNNGG	8 cut(s)	169, 170, 550, 551, 720, 737, 978, 2132
BseMI	GCAATG	2 cut(s)	1746, 2105
BseMII	CTCAG	2 cut(s)	1356, 1782
BseNI	ACTGG	2 cut(s)	742, 2416
BseRI	GAGGAG	3 cut(s)	734, 1432, 1637
BseSI	GKGCMC	1 cut(s)	1723
BseXI	GCAGC	3 cut(s)	74, 425, 806
Bsh1236I	CGCG	3 cut(s)	468, 1064, 1806
Bsh1285I	CGRYCG	2 cut(s)	202, 583
BshFI	GGCC	2 cut(s)	741, 939
BshNI	GGYRCC	1 cut(s)	1103
BshVI	ATCGAT	1 cut(s)	1300
BsiEI	CGRYCG	2 cut(s)	202, 583
BsiHKAI	GWGCWC	3 cut(s)	219, 306, 1723
BsiHKCI	CYCGRG	1 cut(s)	2132
BsiSI	CCGG	3 cut(s)	935, 1716, 1928
BslFI	GGGAC	2 cut(s)	737, 953
BslI	CCNNNNNNNGG	8 cut(s)	169, 170, 550, 551, 720, 737, 978, 2132
BsmAI	GTCTC	4 cut(s)	1878, 1883, 2204, 2215
BsmBI	CGTCTC	1 cut(s)	1883
BsmFI	GGGAC	2 cut(s)	737, 953
BsnI	GGCC	2 cut(s)	741, 939
Bso31I	GGTCTC	1 cut(s)	2215
BsoBI	CYCGRG	1 cut(s)	2132
Bsp119I	TTCGAA	1 cut(s)	594
Bsp1286I	GDGCHC	5 cut(s)	85, 219, 306, 466, 1723
Bsp19I	CCATGG	1 cut(s)	1727
BspACI	CCGC	8 cut(s)	198, 468, 579, 1064, 1149, 1288, 1804, 2180
BspANI	GGCC	2 cut(s)	741, 939
BspCNI	CTCAG	2 cut(s)	1357, 1783
BspDI	ATCGAT	1 cut(s)	1300
BspFNI	CGCG	3 cut(s)	468, 1064, 1806
BspHI	TCATGA	2 cut(s)	1186, 1560
BspLI	GGNNCC	4 cut(s)	178, 559, 1105, 2124
BspPI	GGATC	7 cut(s)	92, 473, 1080, 1120, 1934, 2117, 2130
BspT104I	TTCGAA	1 cut(s)	594
BspT107I	GGYRCC	1 cut(s)	1103
BspTNI	GGTCTC	1 cut(s)	2215
BsrDI	GCAATG	2 cut(s)	1746, 2105
BsrI	ACTGG	2 cut(s)	742, 2416
BssECI	CCNNGG	4 cut(s)	1384, 1727, 1887, 2131
BssNI	GRCGYC	1 cut(s)	1285
BssT1I	CCWWGG	2 cut(s)	1384, 1727
Bst2UI	CCWGG	1 cut(s)	2006
Bst4CI	ACNGT	9 cut(s)	117, 195, 392, 412, 728, 773, 793, 1477, 1872
Bst6I	CTCTTC	4 cut(s)	26, 449, 1886, 1970
BstACI	GRCGYC	1 cut(s)	1285
BstBAI	YACGTR	2 cut(s)	858, 904
BstBI	TTCGAA	1 cut(s)	594
BstC8I	GCNNGC	9 cut(s)	85, 122, 328, 466, 503, 709, 1585, 2031, 2201
BstDEI	CTNAG	5 cut(s)	26, 586, 879, 1365, 1791
BstDSI	CCRYGG	2 cut(s)	1727, 1887
BstEII	GGTNACC	2 cut(s)	140, 521
BstF5I	GGATG	8 cut(s)	913, 1313, 1465, 1625, 1797, 1897, 2021, 2126
BstFNI	CGCG	3 cut(s)	468, 1064, 1806
BstHHI	GCGC	1 cut(s)	1064
BstMAI	GTCTC	4 cut(s)	1878, 1883, 2204, 2215
BstMCI	CGRYCG	2 cut(s)	202, 583
BstMWI	GCNNNNNNNGC	1 cut(s)	2186
BstNI	CCWGG	1 cut(s)	2006
BstNSI	RCATGY	2 cut(s)	951, 2105
BstPI	GGTNACC	2 cut(s)	140, 521
BstSCI	CCNGG	4 cut(s)	934, 1714, 1927, 2004
BstSFI	CTRYAG	3 cut(s)	1078, 1248, 1987
BstSLI	GKGCMC	1 cut(s)	1723
BstUI	CGCG	3 cut(s)	468, 1064, 1806
BstV1I	GCAGC	3 cut(s)	74, 425, 806
BstV2I	GAAGAC	4 cut(s)	99, 480, 1390, 2382
BstX2I	RGATCY	3 cut(s)	682, 1072, 2122
BstYI	RGATCY	3 cut(s)	682, 1072, 2122
Bsu15I	ATCGAT	1 cut(s)	1300
BsuI	GTATCC	1 cut(s)	2253
BsuRI	GGCC	2 cut(s)	741, 939
BsuTUI	ATCGAT	1 cut(s)	1300
BtgI	CCRYGG	2 cut(s)	1727, 1887
BtgZI	GCGATG	1 cut(s)	1821
BtsCI	GGATG	8 cut(s)	913, 1313, 1465, 1625, 1797, 1897, 2021, 2126
BtsI	GCAGTG	2 cut(s)	1721, 2181
BtsIMutI	CAGTG	6 cut(s)	200, 1482, 1721, 2181, 2201, 2409
Cac8I	GCNNGC	9 cut(s)	85, 122, 328, 466, 503, 709, 1585, 2031, 2201
CaiI	CAGNNNCTG	3 cut(s)	1514, 2200, 2363
CciI	TCATGA	2 cut(s)	1186, 1560
CfoI	GCGC	1 cut(s)	1064
Cfr13I	GGNCC	7 cut(s)	176, 557, 841, 937, 1307, 2002, 2339
ClaI	ATCGAT	1 cut(s)	1300
CseI	GACGC	3 cut(s)	1293, 1511, 1776
Csp6I	GTAC	7 cut(s)	354, 430, 735, 811, 898, 1057, 1480
CviQI	GTAC	7 cut(s)	354, 430, 735, 811, 898, 1057, 1480
DdeI	CTNAG	5 cut(s)	26, 586, 879, 1365, 1791
DraI	TTTAAA	1 cut(s)	2152
DraIII	CACNNNGTG	2 cut(s)	117, 498
DrdI	GACNNNNNNGTC	2 cut(s)	365, 1875
DseDI	GACNNNNNNGTC	2 cut(s)	365, 1875
Eam1104I	CTCTTC	4 cut(s)	26, 449, 1886, 1970
EarI	CTCTTC	4 cut(s)	26, 449, 1886, 1970
EciI	GGCGGA	1 cut(s)	2195
Ecl136II	GAGCTC	2 cut(s)	217, 304
Eco130I	CCWWGG	2 cut(s)	1384, 1727
Eco24I	GRGCYC	4 cut(s)	85, 219, 306, 466
Eco31I	GGTCTC	1 cut(s)	2215
Eco32I	GATATC	1 cut(s)	2041
Eco47I	GGWCC	6 cut(s)	176, 557, 841, 1307, 2002, 2339
Eco53kI	GAGCTC	2 cut(s)	217, 304
Eco88I	CYCGRG	1 cut(s)	2132
Eco91I	GGTNACC	2 cut(s)	140, 521
EcoICRI	GAGCTC	2 cut(s)	217, 304
EcoO109I	RGGNCCY	2 cut(s)	176, 557
EcoO65I	GGTNACC	2 cut(s)	140, 521
EcoRII	CCWGG	1 cut(s)	2004
EcoRV	GATATC	1 cut(s)	2041
EcoT14I	CCWWGG	2 cut(s)	1384, 1727
EcoT22I	ATGCAT	3 cut(s)	1091, 1324, 2107
EcoT38I	GRGCYC	4 cut(s)	85, 219, 306, 466
ErhI	CCWWGG	2 cut(s)	1384, 1727
Esp3I	CGTCTC	1 cut(s)	1883
FalI	AAGNNNNNCTT	2 cut(s)	672, 704
FaqI	GGGAC	2 cut(s)	737, 953
FauI	CCCGC	1 cut(s)	1142
FbaI	TGATCA	2 cut(s)	1687, 2166
Fnu4HI	GCNGC	5 cut(s)	88, 439, 469, 820, 1288
FokI	GGATG	8 cut(s)	920, 1300, 1472, 1632, 1784, 1904, 2008, 2113
FriOI	GRGCYC	4 cut(s)	85, 219, 306, 466
Fsp4HI	GCNGC	5 cut(s)	88, 439, 469, 820, 1288
FspBI	CTAG	4 cut(s)	269, 650, 1194, 2117
GlaI	GCGC	1 cut(s)	1063
GluI	GCNGC	5 cut(s)	88, 439, 469, 820, 1288
HaeIII	GGCC	2 cut(s)	741, 939
HapII	CCGG	3 cut(s)	935, 1716, 1928
HgaI	GACGC	3 cut(s)	1293, 1511, 1776
HhaI	GCGC	1 cut(s)	1064
Hin1I	GRCGYC	1 cut(s)	1285
Hin6I	GCGC	1 cut(s)	1062
HinP1I	GCGC	1 cut(s)	1062
HincII	GTYRAC	2 cut(s)	370, 751
HindII	GTYRAC	2 cut(s)	370, 751
HinfI	GANTC	9 cut(s)	836, 911, 1130, 1153, 1190, 1439, 1740, 2141, 2360
HpaII	CCGG	3 cut(s)	935, 1716, 1928
HphI	GGTGA	8 cut(s)	24, 211, 415, 592, 796, 1393, 1888, 2346
Hpy166II	GTNNAC	5 cut(s)	370, 751, 1480, 1643, 1721
Hpy188I	TCNGA	5 cut(s)	334, 715, 1792, 2097, 2146
Hpy188III	TCNNGA	9 cut(s)	380, 761, 1187, 1326, 1353, 1496, 1561, 1573, 1943
Hpy8I	GTNNAC	5 cut(s)	370, 751, 1480, 1643, 1721
Hpy99I	CGWCG	2 cut(s)	1129, 1287
HpyAV	CCTTC	4 cut(s)	1207, 1363, 2235, 2361
HpyCH4III	ACNGT	9 cut(s)	117, 195, 392, 412, 728, 773, 793, 1477, 1872
HpyCH4IV	ACGT	2 cut(s)	857, 903
HpyF10VI	GCNNNNNNNGC	1 cut(s)	2186
HpyF3I	CTNAG	5 cut(s)	26, 586, 879, 1365, 1791
HpySE526I	ACGT	2 cut(s)	857, 903
Hsp92I	GRCGYC	1 cut(s)	1285
HspAI	GCGC	1 cut(s)	1062
Ksp22I	TGATCA	2 cut(s)	1687, 2166
LmnI	GCTCC	3 cut(s)	335, 716, 1918
Lsp1109I	GCAGC	3 cut(s)	74, 425, 806
LweI	GCATC	3 cut(s)	1331, 1341, 1610
MaeI	CTAG	4 cut(s)	269, 650, 1194, 2117
MaeII	ACGT	2 cut(s)	857, 903
MaeIII	GTNAC	5 cut(s)	140, 521, 1631, 1894, 2365
MfeI	CAATTG	3 cut(s)	133, 514, 1179
MflI	RGATCY	3 cut(s)	682, 1072, 2122
MhlI	GDGCHC	5 cut(s)	85, 219, 306, 466, 1723
MlyI	GAGTC	2 cut(s)	1184, 1433
MmeI	TCCRAC	4 cut(s)	309, 357, 690, 738
Mph1103I	ATGCAT	3 cut(s)	1091, 1324, 2107
MroXI	GAANNNNTTC	2 cut(s)	892, 1665
MseI	TTAA	3 cut(s)	2151, 2330, 2416
MslI	CAYNNNNRTG	4 cut(s)	1638, 1726, 1806, 2055
MspA1I	CMGCKG	2 cut(s)	1203, 2312
MspI	CCGG	3 cut(s)	935, 1716, 1928
MspR9I	CCNGG	4 cut(s)	936, 1716, 1929, 2006
MunI	CAATTG	3 cut(s)	133, 514, 1179
MvaI	CCWGG	1 cut(s)	2006
MvnI	CGCG	3 cut(s)	468, 1064, 1806
MwoI	GCNNNNNNNGC	1 cut(s)	2186
NciI	CCSGG	3 cut(s)	936, 1716, 1929
NcoI	CCATGG	1 cut(s)	1727
NlaIV	GGNNCC	4 cut(s)	178, 559, 1105, 2124
NmuCI	GTSAC	3 cut(s)	1631, 1894, 2365
NsiI	ATGCAT	3 cut(s)	1091, 1324, 2107
NspI	RCATGY	2 cut(s)	951, 2105
NspV	TTCGAA	1 cut(s)	594
OliI	CACNNNNGTG	1 cut(s)	1638
PagI	TCATGA	2 cut(s)	1186, 1560
PciI	ACATGT	1 cut(s)	947
PcsI	WCGNNNNNNNCGW	6 cut(s)	330, 711, 1121, 1130, 1501, 1636
PdmI	GAANNNNTTC	2 cut(s)	892, 1665
PfeI	GAWTC	7 cut(s)	836, 911, 1130, 1153, 1740, 2141, 2360
PflMI	CCANNNNNTGG	1 cut(s)	978
PkrI	GCNGC	5 cut(s)	89, 440, 470, 821, 1289
PleI	GAGTC	2 cut(s)	1184, 1433
PpsI	GAGTC	2 cut(s)	1184, 1433
Ppu21I	YACGTR	2 cut(s)	858, 904
PpuMI	RGGWCCY	2 cut(s)	176, 557
PscI	ACATGT	1 cut(s)	947
PsiI	TTATAA	1 cut(s)	1950
Psp124BI	GAGCTC	2 cut(s)	219, 306
Psp5II	RGGWCCY	2 cut(s)	176, 557
Psp6I	CCWGG	1 cut(s)	2004
PspEI	GGTNACC	2 cut(s)	140, 521
PspGI	CCWGG	1 cut(s)	2004
PspN4I	GGNNCC	4 cut(s)	178, 559, 1105, 2124
PspPI	GGNCC	7 cut(s)	176, 557, 841, 937, 1307, 2002, 2339
PspPPI	RGGWCCY	2 cut(s)	176, 557
PstNI	CAGNNNCTG	3 cut(s)	1514, 2200, 2363
PsuI	RGATCY	3 cut(s)	682, 1072, 2122
PvuII	CAGCTG	2 cut(s)	1203, 2312
RsaI	GTAC	7 cut(s)	355, 431, 736, 812, 899, 1058, 1481
RsaNI	GTAC	7 cut(s)	354, 430, 735, 811, 898, 1057, 1480
RseI	CAYNNNNRTG	4 cut(s)	1638, 1726, 1806, 2055
SacI	GAGCTC	2 cut(s)	219, 306
SaqAI	TTAA	3 cut(s)	2151, 2330, 2416
SatI	GCNGC	5 cut(s)	88, 439, 469, 820, 1288
Sau96I	GGNCC	7 cut(s)	176, 557, 841, 937, 1307, 2002, 2339
SchI	GAGTC	2 cut(s)	1184, 1433
ScrFI	CCNGG	4 cut(s)	936, 1716, 1929, 2006
SduI	GDGCHC	5 cut(s)	85, 219, 306, 466, 1723
SfaNI	GCATC	3 cut(s)	1331, 1341, 1610
SfcI	CTRYAG	3 cut(s)	1078, 1248, 1987
SfuI	TTCGAA	1 cut(s)	594
SinI	GGWCC	6 cut(s)	176, 557, 841, 1307, 2002, 2339
SmiMI	CAYNNNNRTG	4 cut(s)	1638, 1726, 1806, 2055
SmlI	CTYRAG	1 cut(s)	919
SmoI	CTYRAG	1 cut(s)	919
SsiI	CCGC	8 cut(s)	198, 468, 579, 1064, 1149, 1288, 1804, 2180
SspI	AATATT	3 cut(s)	107, 488, 892
SspMI	CTAG	4 cut(s)	269, 650, 1194, 2117
SstI	GAGCTC	2 cut(s)	219, 306
StyD4I	CCNGG	4 cut(s)	934, 1714, 1927, 2004
StyI	CCWWGG	2 cut(s)	1384, 1727
TaaI	ACNGT	9 cut(s)	117, 195, 392, 412, 728, 773, 793, 1477, 1872
TaiI	ACGT	2 cut(s)	860, 906
TaqII	GACCGA	1 cut(s)	829
TatI	WGTACW	6 cut(s)	353, 429, 734, 810, 1056, 1479
TauI	GCSGC	2 cut(s)	471, 1290
TfiI	GAWTC	7 cut(s)	836, 911, 1130, 1153, 1740, 2141, 2360
Tru1I	TTAA	3 cut(s)	2151, 2330, 2416
Tru9I	TTAA	3 cut(s)	2151, 2330, 2416
TscAI	CASTG	6 cut(s)	200, 1482, 1728, 2181, 2201, 2416
TseFI	GTSAC	3 cut(s)	1631, 1894, 2365
TseI	GCWGC	3 cut(s)	87, 438, 819
Tsp45I	GTSAC	3 cut(s)	1631, 1894, 2365
TspGWI	ACGGA	4 cut(s)	1028, 1142, 1689, 1904
TspRI	CASTG	6 cut(s)	200, 1482, 1728, 2181, 2201, 2416
Van91I	CCANNNNNTGG	1 cut(s)	978
VneI	GTGCAC	1 cut(s)	1719
VpaK11BI	GGWCC	6 cut(s)	176, 557, 841, 1307, 2002, 2339
XapI	RAATTY	3 cut(s)	272, 653, 2091
XceI	RCATGY	2 cut(s)	951, 2105
XmnI	GAANNNNTTC	2 cut(s)	892, 1665
XspI	CTAG	4 cut(s)	269, 650, 1194, 2117
Zsp2I	ATGCAT	3 cut(s)	1091, 1324, 2107

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.