Rh4CG290300

Enhancer of polycomb-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0000786
Physical Location & Seq
Forward (+)
54897415 .. 54897984
570 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG290300.1

Sequence Viewer

Length: 297 bp
ATGAGGTTGGCGTCGCCGTTTTCTGTGATTAAGAGTTTCGAGTCCGAGTTTGGGACTAAGTCGACTCGGAGACTAGCGACGAGTGAGTCGAGGAAGAGGAAGAGCGCGAGGCCGAGAGTGGTGTTGCTTCGGAATTTGAGGAATGAAATGCCATTGGTGGAGATGAGGAGGACCACGAAGGTGGTGGGATTGGGTGTTGTGACAGGTGGAGTAGGAGGTGGTGCAGCAGCAAGTGGTGGTGGTGAGAAGGTGGTTTTGGTGGTGGTGACCTTGAAACTGCTCTTGGCAAGGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EPL1

Protein Analysis

98

Amino Acids

10.49

Weight (kDa)

11.87

Isoelectric Point (pI)

48.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 85
AccI GTMKAC 1 cut(s) 62
AccII CGCG 1 cut(s) 107
AcsI RAATTY 1 cut(s) 133
AcyI GRCGYC 1 cut(s) 11
AfiI CCNNNNNNNGG 1 cut(s) 51
AgsI TTSAA 1 cut(s) 274
AjuI GAANNNNNNNTTGG 3 cut(s) 239, 266, 271
AleI CACNNNNGTG 1 cut(s) 179
Alw26I GTCTC 1 cut(s) 64
AoxI GGCC 2 cut(s) 110, 290
ApeKI GCWGC 2 cut(s) 224, 227
ApoI RAATTY 1 cut(s) 133
AspLEI GCGC 1 cut(s) 107
AspS9I GGNCC 1 cut(s) 171
AsuHPI GGTGA 2 cut(s) 254, 277
AvaII GGWCC 1 cut(s) 171
BbvI GCAGC 2 cut(s) 236, 239
BcoDI GTCTC 1 cut(s) 64
BfaI CTAG 1 cut(s) 74
BisI GCNGC 2 cut(s) 225, 228
BlsI GCNGC 2 cut(s) 226, 229
Bme18I GGWCC 1 cut(s) 171
BmgT120I GGNCC 1 cut(s) 171
BsaHI GRCGYC 1 cut(s) 11
Bsc4I CCNNNNNNNGG 1 cut(s) 51
BseLI CCNNNNNNNGG 1 cut(s) 51
BseRI GAGGAG 1 cut(s) 181
BseXI GCAGC 2 cut(s) 236, 239
BsgI GTGCAG 1 cut(s) 243
Bsh1236I CGCG 1 cut(s) 107
BshFI GGCC 2 cut(s) 112, 292
BslFI GGGAC 1 cut(s) 67
BslI CCNNNNNNNGG 1 cut(s) 51
BsmAI GTCTC 1 cut(s) 64
BsmFI GGGAC 1 cut(s) 67
BsnI GGCC 2 cut(s) 112, 292
BspANI GGCC 2 cut(s) 112, 292
BspFNI CGCG 1 cut(s) 107
BspQI GCTCTTC 1 cut(s) 95
BssNI GRCGYC 1 cut(s) 11
Bst6I CTCTTC 2 cut(s) 89, 95
BstACI GRCGYC 1 cut(s) 11
BstDEI CTNAG 1 cut(s) 57
BstEII GGTNACC 1 cut(s) 265
BstFNI CGCG 1 cut(s) 107
BstHHI GCGC 1 cut(s) 107
BstMAI GTCTC 1 cut(s) 64
BstPI GGTNACC 1 cut(s) 265
BstUI CGCG 1 cut(s) 107
BstV1I GCAGC 2 cut(s) 236, 239
BstXI CCANNNNNNTGG 1 cut(s) 181
BsuRI GGCC 2 cut(s) 112, 292
CfoI GCGC 1 cut(s) 107
Cfr13I GGNCC 1 cut(s) 171
CviJI RGCY 2 cut(s) 112, 292
CviKI_1 RGCY 2 cut(s) 112, 292
DdeI CTNAG 1 cut(s) 57
DrdI GACNNNNNNGTC 1 cut(s) 85
DseDI GACNNNNNNGTC 1 cut(s) 85
Eam1104I CTCTTC 2 cut(s) 89, 95
EarI CTCTTC 2 cut(s) 89, 95
Eco147I AGGCCT 1 cut(s) 292
Eco47I GGWCC 1 cut(s) 171
Eco91I GGTNACC 1 cut(s) 265
EcoO65I GGTNACC 1 cut(s) 265
FaqI GGGAC 1 cut(s) 67
FblI GTMKAC 1 cut(s) 62
Fnu4HI GCNGC 2 cut(s) 225, 228
Fsp4HI GCNGC 2 cut(s) 225, 228
FspBI CTAG 1 cut(s) 74
GlaI GCGC 1 cut(s) 106
GluI GCNGC 2 cut(s) 225, 228
HaeIII GGCC 2 cut(s) 112, 292
HhaI GCGC 1 cut(s) 107
Hin1I GRCGYC 1 cut(s) 11
Hin6I GCGC 1 cut(s) 105
HinP1I GCGC 1 cut(s) 105
HincII GTYRAC 1 cut(s) 63
HindII GTYRAC 1 cut(s) 63
HinfI GANTC 3 cut(s) 41, 64, 86
HphI GGTGA 2 cut(s) 254, 277
Hpy166II GTNNAC 1 cut(s) 63
Hpy188I TCNGA 3 cut(s) 46, 69, 132
Hpy8I GTNNAC 1 cut(s) 63
Hpy99I CGWCG 2 cut(s) 16, 82
HpyAV CCTTC 2 cut(s) 172, 241
HpyCH4V TGCA 1 cut(s) 224
HpyF3I CTNAG 1 cut(s) 57
Hsp92I GRCGYC 1 cut(s) 11
HspAI GCGC 1 cut(s) 105
LguI GCTCTTC 1 cut(s) 95
LpnPI CCDG 1 cut(s) 189
Lsp1109I GCAGC 2 cut(s) 236, 239
MaeI CTAG 1 cut(s) 74
MaeIII GTNAC 2 cut(s) 199, 265
MboII GAAGA 2 cut(s) 106, 112
MluCI AATT 1 cut(s) 133
MlyI GAGTC 3 cut(s) 50, 58, 95
MnlI CCTC 7 cut(s) 84, 90, 102, 132, 159, 162, 209
MseI TTAA 1 cut(s) 30
MslI CAYNNNNRTG 1 cut(s) 179
MvnI CGCG 1 cut(s) 107
NmeAIII GCCGAG 1 cut(s) 138
NmuCI GTSAC 2 cut(s) 199, 265
OliI CACNNNNGTG 1 cut(s) 179
PceI AGGCCT 1 cut(s) 292
PciSI GCTCTTC 1 cut(s) 95
PcsI WCGNNNNNNNCGW 1 cut(s) 86
PflFI GACNNNGTC 1 cut(s) 58
PkrI GCNGC 2 cut(s) 226, 229
PleI GAGTC 3 cut(s) 49, 58, 94
PpsI GAGTC 3 cut(s) 49, 58, 94
PspEI GGTNACC 1 cut(s) 265
PspPI GGNCC 1 cut(s) 171
PsyI GACNNNGTC 1 cut(s) 58
RseI CAYNNNNRTG 1 cut(s) 179
SalI GTCGAC 1 cut(s) 61
SapI GCTCTTC 1 cut(s) 95
SaqAI TTAA 1 cut(s) 30
SatI GCNGC 2 cut(s) 225, 228
Sau96I GGNCC 1 cut(s) 171
SchI GAGTC 3 cut(s) 50, 58, 95
SetI ASST 6 cut(s) 8, 183, 208, 220, 252, 272
SinI GGWCC 1 cut(s) 171
SmiMI CAYNNNNRTG 1 cut(s) 179
Sse9I AATT 1 cut(s) 133
SseBI AGGCCT 1 cut(s) 292
SspMI CTAG 1 cut(s) 74
StuI AGGCCT 1 cut(s) 292
TaqI TCGA 3 cut(s) 39, 62, 89
TasI AATT 1 cut(s) 133
Tru1I TTAA 1 cut(s) 30
Tru9I TTAA 1 cut(s) 30
TseFI GTSAC 2 cut(s) 199, 265
TseI GCWGC 2 cut(s) 224, 227
Tsp45I GTSAC 2 cut(s) 199, 265
TspDTI ATGAA 1 cut(s) 159
Tth111I GACNNNGTC 1 cut(s) 58
VpaK11BI GGWCC 1 cut(s) 171
XapI RAATTY 1 cut(s) 133
XcmI CCANNNNNNNNNTGG 1 cut(s) 181
XmiI GTMKAC 1 cut(s) 62
XspI CTAG 1 cut(s) 74
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.