Rmu_co8076798.1_g000001

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8076798.1
Physical Location & Seq
Reverse (-)
2 .. 559
558 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8076798.1_g000001.1.cds

Sequence Viewer

Length: 457 bp
atgtgcttcattttttttatatggcgacgccgcaacagaaatcgatatggtccatcatcctacgcatctcgaatcatctattctaaaagctattccagaagtgatactgagaagggaagtgcatacactggagttcatgtattcacctacaatgaacttgaacaagcaacaaactatttcgattcatctaaagaacttggtggtggaggctttggcagagtttactatggaaaagtccgtgatgggcgagcagttgctgtcaagcgactatatgaaaccaattgcaggagagttgagcagttcctgaatgaaattgagattttagctcgcctacgccaccgaaaccttgtgttactctatggatgcacctctcgtcacagccgtgaactcctccttgtctacgaatatgttcccaatggaactcttgctgatcatcttcatggtggaaaagcaaaac

Protein Analysis

152

Amino Acids

17.68

Weight (kDa)

9.76

Isoelectric Point (pI)

48.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 399
AciI CCGC 1 cut(s) 31
AcyI GRCGYC 1 cut(s) 28
AfiI CCNNNNNNNGG 1 cut(s) 285
AgsI TTSAA 1 cut(s) 161
AleI CACNNNNGTG 1 cut(s) 381
AluBI AGCT 2 cut(s) 90, 326
AluI AGCT 2 cut(s) 90, 326
AlwNI CAGNNNCTG 2 cut(s) 257, 304
Asp700I GAANNNNTTC 1 cut(s) 408
AspS9I GGNCC 1 cut(s) 50
AsuHPI GGTGA 1 cut(s) 136
AvaII GGWCC 1 cut(s) 50
BccI CCATC 2 cut(s) 61, 236
BceAI ACGGC 1 cut(s) 366
BclI TGATCA 1 cut(s) 430
BisI GCNGC 1 cut(s) 31
BlsI GCNGC 1 cut(s) 32
Bme18I GGWCC 1 cut(s) 50
BmgT120I GGNCC 1 cut(s) 50
BmsI GCATC 2 cut(s) 74, 353
BpmI CTGGAG 1 cut(s) 150
Bsa29I ATCGAT 1 cut(s) 43
BsaHI GRCGYC 1 cut(s) 28
BsaXI ACNNNNNCTCC 2 cut(s) 123, 153
Bsc4I CCNNNNNNNGG 1 cut(s) 285
Bse1I ACTGG 1 cut(s) 133
BseCI ATCGAT 1 cut(s) 43
BseGI GGATG 2 cut(s) 56, 368
BseLI CCNNNNNNNGG 1 cut(s) 285
BseMII CTCAG 1 cut(s) 99
BseNI ACTGG 1 cut(s) 133
BseRI GAGGAG 1 cut(s) 380
BshVI ATCGAT 1 cut(s) 43
BslI CCNNNNNNNGG 1 cut(s) 285
Bsp143I GATC 1 cut(s) 430
BspACI CCGC 1 cut(s) 31
BspCNI CTCAG 1 cut(s) 100
BspDI ATCGAT 1 cut(s) 43
BsrI ACTGG 1 cut(s) 133
BssMI GATC 1 cut(s) 430
BssNI GRCGYC 1 cut(s) 28
BstACI GRCGYC 1 cut(s) 28
BstC8I GCNNGC 2 cut(s) 249, 328
BstDEI CTNAG 1 cut(s) 108
BstF5I GGATG 2 cut(s) 56, 368
BstKTI GATC 1 cut(s) 433
BstMBI GATC 1 cut(s) 430
Bsu15I ATCGAT 1 cut(s) 43
BsuTUI ATCGAT 1 cut(s) 43
BtsCI GGATG 2 cut(s) 56, 368
BtsIMutI CAGTG 1 cut(s) 126
Cac8I GCNNGC 2 cut(s) 249, 328
CaiI CAGNNNCTG 2 cut(s) 257, 304
Cfr13I GGNCC 1 cut(s) 50
ClaI ATCGAT 1 cut(s) 43
CseI GACGC 1 cut(s) 36
CviAII CATG 2 cut(s) 137, 440
CviJI RGCY 4 cut(s) 90, 210, 326, 381
CviKI_1 RGCY 4 cut(s) 90, 210, 326, 381
DdeI CTNAG 1 cut(s) 108
DpnI GATC 1 cut(s) 432
DpnII GATC 1 cut(s) 430
Eco47I GGWCC 1 cut(s) 50
FaeI CATG 2 cut(s) 140, 443
FatI CATG 2 cut(s) 136, 439
FbaI TGATCA 1 cut(s) 430
FblI GTMKAC 1 cut(s) 399
Fnu4HI GCNGC 1 cut(s) 31
FokI GGATG 2 cut(s) 43, 375
Fsp4HI GCNGC 1 cut(s) 31
GluI GCNGC 1 cut(s) 31
GsuI CTGGAG 1 cut(s) 150
HgaI GACGC 1 cut(s) 36
Hin1I GRCGYC 1 cut(s) 28
Hin1II CATG 2 cut(s) 140, 443
HinfI GANTC 2 cut(s) 72, 182
HphI GGTGA 1 cut(s) 136
Hpy166II GTNNAC 3 cut(s) 223, 386, 400
Hpy188III TCNNGA 3 cut(s) 69, 96, 304
Hpy8I GTNNAC 3 cut(s) 223, 386, 400
Hpy99I CGWCG 1 cut(s) 30
HpyAV CCTTC 1 cut(s) 106
HpyCH4V TGCA 3 cut(s) 122, 285, 366
HpyF3I CTNAG 1 cut(s) 108
Hsp92I GRCGYC 1 cut(s) 28
Hsp92II CATG 2 cut(s) 140, 443
Ksp22I TGATCA 1 cut(s) 430
Kzo9I GATC 1 cut(s) 430
LpnPI CCDG 4 cut(s) 109, 114, 271, 317
LweI GCATC 2 cut(s) 74, 353
MaeIII GTNAC 2 cut(s) 351, 374
MalI GATC 1 cut(s) 432
MboI GATC 1 cut(s) 430
MboII GAAGA 1 cut(s) 428
MfeI CAATTG 1 cut(s) 280
MluCI AATT 2 cut(s) 280, 312
MnlI CCTC 3 cut(s) 200, 379, 401
MroXI GAANNNNTTC 1 cut(s) 408
MslI CAYNNNNRTG 2 cut(s) 381, 438
MunI CAATTG 1 cut(s) 280
NdeII GATC 1 cut(s) 430
NlaIII CATG 2 cut(s) 140, 443
NmuCI GTSAC 1 cut(s) 374
OliI CACNNNNGTG 1 cut(s) 381
PcsI WCGNNNNNNNCGW 1 cut(s) 379
PdmI GAANNNNTTC 1 cut(s) 408
PfeI GAWTC 2 cut(s) 72, 182
PkrI GCNGC 1 cut(s) 32
PspPI GGNCC 1 cut(s) 50
PstNI CAGNNNCTG 2 cut(s) 257, 304
RseI CAYNNNNRTG 2 cut(s) 381, 438
SatI GCNGC 1 cut(s) 31
Sau3AI GATC 1 cut(s) 430
Sau96I GGNCC 1 cut(s) 50
SetI ASST 5 cut(s) 92, 149, 328, 348, 371
SfaNI GCATC 2 cut(s) 74, 353
SinI GGWCC 1 cut(s) 50
SmiMI CAYNNNNRTG 2 cut(s) 381, 438
Sse9I AATT 2 cut(s) 280, 312
SsiI CCGC 1 cut(s) 31
TaqI TCGA 3 cut(s) 43, 70, 180
TasI AATT 2 cut(s) 280, 312
TauI GCSGC 1 cut(s) 33
TfiI GAWTC 2 cut(s) 72, 182
TscAI CASTG 1 cut(s) 133
TseFI GTSAC 1 cut(s) 374
Tsp45I GTSAC 1 cut(s) 374
TspDTI ATGAA 6 cut(s) 125, 168, 174, 288, 324, 428
TspGWI ACGGA 1 cut(s) 227
TspRI CASTG 1 cut(s) 133
VpaK11BI GGWCC 1 cut(s) 50
XmiI GTMKAC 1 cut(s) 399
XmnI GAANNNNTTC 1 cut(s) 408
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.