FvH4_6g33870

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000760
Physical Location & Seq
Reverse (-)
26810793 .. 26813790
2998 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g33870.t1

Sequence Viewer

Length: 1485 bp
ATGGTGACGCTGACATCTATCAAGAGAAAGAAGGAGATTTCAAGAACAGTAAGCTTTGATAGGAAAACCGATTCAAGCAACACCACCAGATCCAATGGAGTAGTTGAACTGGTTTTAGAAGAATCTGTAAGCTACAAGAAAAGGAAAGCAGGACAACTAAAGCTTGATACTTCAACTTTGCTACACAAGGTAGAAGGTTGTGGTTCTCCACAGACCCCACGTGAGCTTGATGAAGCTGCAATCAAGCTGCAGAAATTTTACAAGAGTTACCGAACTAGACGAAACCTTGCAGATTGTGCTGTGGTTGTTGAGGAGCTATGGTGGAAGGCATTAGACTTTGCTGCACTTAGGCGTAGCTCAGTGTCATTCTTTGAATCTGTTAAATCAGAAACTGCAGTTTCCAGATGGGCAAGAGCAAAGACTAGAGCTGCCAAGGTTGGGAAGGGTTTGTCCAAGGATGAGAAGGCTCAGAAATTAGCACTAAGACATTGGCTTGAGGCTATTGATCCACGACATCGATATGGACACAATCTGCACTTGTATTATGATGTCTGGTTTAATAGCGCGAGCTCTCAACCTTTCTTCTACTGGTTGGATGTTGGAGATGGGAAAGAAGAAAATCTTGAAAAGTGTCCAAGAACGGTTCTACAACGCCAATGCATCAAGTACCTTGGACCGAATGAGAGGGAAACATATGAAGTGATTGTGACCAGTGGGAAGCTTGTATACAGACAAAGTGGGAACCTTGTGACTACTACTGAGGGGTCCAAATGGATCTTTGTTCTCAGTGCATCGAGGATTATGTATGTCGCGGAGAAGAAGAAAGGCTACTTCCAGCACTCTAGTTTTCTATCCGGAGGTGCCACCATTGCAGCAGGGAGATTAGTTGCTTCTGATGGGGTTCTTGAGGCTGTTTGGTGCTACAGTGGTCATTATCGGCCGACAGAAGAACACTTTTTGGAGTTTATCAGCTTCTTAGAGGAGCAACAGGTGGACTTGACAAATGTCAAAAAATATCCAATAGATGATGATATTCCACCTCCATCTACCAATAAAGATATGAACACCCTTGAGGATATCCCATCAGCGAACATTGACCCGAGTACTAATGAAAATGAGCATGCCATTGGCACTGCCATAGAAAGTGATCACAATCAGGACATTGTAGAAGAACCACAGTTTGACTTAGGAAGGGGATTGCCTTGTAAATGGACTACAGGAGCTGGTCCTCGAATTGGATGTGTGAGAGACTACCCCGCACAGCTCCAATTTCAAGCACTTGAGCAAGTAAATCTGTCACCTAGAATCAAAGTAGAACGCCCTGCAATCAATAATACCCCAGTGCCTTCACCAAGACCTAGTCCCAACTTCCACTTATCACCTAGACTTGCATATATGGGACTTCCTAGCCCAAGAAGATTAAATAATTTAAGTCCTGCCAACTCCCCACTAGATCTGTCAGCAACTAAACCCCATTGTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

495

Amino Acids

55.74

Weight (kDa)

8.88

Isoelectric Point (pI)

47.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 860
AccI GTMKAC 1 cut(s) 726
AccII CGCG 2 cut(s) 566, 812
AccIII TCCGGA 1 cut(s) 854
AciI CCGC 2 cut(s) 812, 1257
AclWI GGATC 3 cut(s) 84, 500, 782
AcoI YGGCCR 1 cut(s) 938
AcsI RAATTY 1 cut(s) 254
AcvI CACGTG 1 cut(s) 221
AfaI GTAC 2 cut(s) 668, 1105
AfiI CCNNNNNNNGG 2 cut(s) 438, 1235
AgsI TTSAA 7 cut(s) 42, 75, 107, 174, 374, 626, 1274
Alw21I GWGCWC 1 cut(s) 572
Alw26I GTCTC 1 cut(s) 1242
AlwI GGATC 3 cut(s) 84, 500, 782
AlwNI CAGNNNCTG 2 cut(s) 392, 1223
Ama87I CYCGRG 1 cut(s) 1099
Aor13HI TCCGGA 1 cut(s) 854
AoxI GGCC 1 cut(s) 938
ApeKI GCWGC 5 cut(s) 236, 247, 341, 428, 872
ApoI RAATTY 1 cut(s) 254
AspLEI GCGC 1 cut(s) 566
AspS9I GGNCC 3 cut(s) 674, 765, 1226
AsuHPI GGTGA 4 cut(s) 16, 1290, 1341, 1371
AvaI CYCGRG 1 cut(s) 1099
AvaII GGWCC 3 cut(s) 674, 765, 1226
BanI GGYRCC 1 cut(s) 860
BanII GRGCYC 1 cut(s) 572
BarI GAAGNNNNNNTAC 4 cut(s) 710, 742, 812, 844
BbrPI CACGTG 1 cut(s) 221
Bbv12I GWGCWC 1 cut(s) 572
BbvI GCAGC 5 cut(s) 223, 234, 328, 415, 884
BccI CCATC 5 cut(s) 399, 599, 890, 1051, 1090
BclI TGATCA 1 cut(s) 1147
BcoDI GTCTC 1 cut(s) 1242
BfaI CTAG 8 cut(s) 276, 423, 843, 1302, 1359, 1383, 1407, 1451
BfmI CTRYAG 4 cut(s) 248, 393, 922, 1215
BglII AGATCT 1 cut(s) 1453
BisI GCNGC 5 cut(s) 237, 248, 342, 429, 873
BlsI GCNGC 5 cut(s) 238, 249, 343, 430, 874
BmcAI AGTACT 1 cut(s) 1105
Bme18I GGWCC 3 cut(s) 674, 765, 1226
BmeT110I CYCGRG 1 cut(s) 1099
BmgT120I GGNCC 3 cut(s) 674, 765, 1226
BmiI GGNNCC 3 cut(s) 743, 766, 862
BmrI ACTGGG 1 cut(s) 1334
BmsI GCATC 2 cut(s) 669, 800
BmuI ACTGGG 1 cut(s) 1334
BoxI GACNNNNGTC 1 cut(s) 1004
BpuEI CTTGAG 4 cut(s) 515, 926, 1091, 1301
Bsa29I ATCGAT 1 cut(s) 517
BsaAI YACGTR 1 cut(s) 221
BsaBI GATNNNNATC 1 cut(s) 1152
BsaJI CCNNGG 3 cut(s) 432, 453, 670
BsaWI WCCGGW 1 cut(s) 854
BsaXI ACNNNNNCTCC 2 cut(s) 305, 335
Bsc4I CCNNNNNNNGG 2 cut(s) 438, 1235
Bse1I ACTGG 4 cut(s) 114, 593, 711, 1340
Bse3DI GCAATG 1 cut(s) 867
Bse8I GATNNNNATC 1 cut(s) 1152
BseAI TCCGGA 1 cut(s) 854
BseCI ATCGAT 1 cut(s) 517
BseDI CCNNGG 3 cut(s) 432, 453, 670
BseGI GGATG 3 cut(s) 463, 601, 1244
BseJI GATNNNNATC 1 cut(s) 1152
BseLI CCNNNNNNNGG 2 cut(s) 438, 1235
BseMI GCAATG 1 cut(s) 867
BseMII CTCAG 4 cut(s) 372, 482, 750, 799
BseNI ACTGG 4 cut(s) 114, 593, 711, 1340
BseRI GAGGAG 2 cut(s) 326, 995
BseX3I CGGCCG 1 cut(s) 938
BseXI GCAGC 5 cut(s) 223, 234, 328, 415, 884
BsgI GTGCAG 2 cut(s) 327, 518
Bsh1236I CGCG 2 cut(s) 566, 812
Bsh1285I CGRYCG 1 cut(s) 941
BshFI GGCC 1 cut(s) 940
BshNI GGYRCC 1 cut(s) 860
BshVI ATCGAT 1 cut(s) 517
BsiEI CGRYCG 1 cut(s) 941
BsiHKAI GWGCWC 1 cut(s) 572
BsiHKCI CYCGRG 1 cut(s) 1099
BsiSI CCGG 1 cut(s) 855
BslFI GGGAC 2 cut(s) 1347, 1413
BslI CCNNNNNNNGG 2 cut(s) 438, 1235
BsmAI GTCTC 1 cut(s) 1242
BsmFI GGGAC 2 cut(s) 1347, 1413
BsnI GGCC 1 cut(s) 940
BsoBI CYCGRG 1 cut(s) 1099
Bsp1286I GDGCHC 1 cut(s) 572
Bsp13I TCCGGA 1 cut(s) 854
Bsp143I GATC 5 cut(s) 89, 505, 774, 1147, 1453
BspACI CCGC 2 cut(s) 812, 1257
BspANI GGCC 1 cut(s) 940
BspCNI CTCAG 4 cut(s) 371, 481, 751, 798
BspDI ATCGAT 1 cut(s) 517
BspEI TCCGGA 1 cut(s) 854
BspFNI CGCG 2 cut(s) 566, 812
BspLI GGNNCC 3 cut(s) 743, 766, 862
BspMAI CTGCAG 2 cut(s) 252, 397
BspPI GGATC 3 cut(s) 84, 500, 782
BspT107I GGYRCC 1 cut(s) 860
BsrDI GCAATG 1 cut(s) 867
BsrI ACTGG 4 cut(s) 114, 593, 711, 1340
BssECI CCNNGG 3 cut(s) 432, 453, 670
BssMI GATC 5 cut(s) 89, 505, 774, 1147, 1453
BssNAI GTATAC 1 cut(s) 727
BssT1I CCWWGG 3 cut(s) 432, 453, 670
Bst1107I GTATAC 1 cut(s) 727
Bst4CI ACNGT 4 cut(s) 49, 643, 926, 1179
BstAPI GCANNNNNTGC 1 cut(s) 296
BstBAI YACGTR 1 cut(s) 221
BstC8I GCNNGC 2 cut(s) 568, 1122
BstDEI CTNAG 8 cut(s) 347, 358, 468, 482, 759, 785, 976, 1186
BstF5I GGATG 3 cut(s) 463, 601, 1244
BstFNI CGCG 2 cut(s) 566, 812
BstHHI GCGC 1 cut(s) 566
BstKTI GATC 5 cut(s) 92, 508, 777, 1150, 1456
BstMAI GTCTC 1 cut(s) 1242
BstMBI GATC 5 cut(s) 89, 505, 774, 1147, 1453
BstMCI CGRYCG 1 cut(s) 941
BstMWI GCNNNNNNNGC 2 cut(s) 296, 869
BstNSI RCATGY 1 cut(s) 1124
BstPAI GACNNNNGTC 1 cut(s) 1004
BstSFI CTRYAG 4 cut(s) 248, 393, 922, 1215
BstUI CGCG 2 cut(s) 566, 812
BstV1I GCAGC 5 cut(s) 223, 234, 328, 415, 884
BstX2I RGATCY 3 cut(s) 89, 774, 1453
BstYI RGATCY 3 cut(s) 89, 774, 1453
BstZ17I GTATAC 1 cut(s) 727
BstZI CGGCCG 1 cut(s) 938
Bsu15I ATCGAT 1 cut(s) 517
BsuRI GGCC 1 cut(s) 940
BsuTUI ATCGAT 1 cut(s) 517
BtsCI GGATG 3 cut(s) 463, 601, 1244
BtsI GCAGTG 1 cut(s) 1131
BtsIMutI CAGTG 6 cut(s) 366, 718, 793, 931, 1131, 1347
Cac8I GCNNGC 2 cut(s) 568, 1122
CaiI CAGNNNCTG 2 cut(s) 392, 1223
CfoI GCGC 1 cut(s) 566
Cfr13I GGNCC 3 cut(s) 674, 765, 1226
ClaI ATCGAT 1 cut(s) 517
CseI GACGC 1 cut(s) 16
Csp6I GTAC 2 cut(s) 667, 1104
CviAII CATG 1 cut(s) 1121
CviQI GTAC 2 cut(s) 667, 1104
DdeI CTNAG 8 cut(s) 347, 358, 468, 482, 759, 785, 976, 1186
DpnI GATC 5 cut(s) 91, 507, 776, 1149, 1455
DpnII GATC 5 cut(s) 89, 505, 774, 1147, 1453
EaeI YGGCCR 1 cut(s) 938
EagI CGGCCG 1 cut(s) 938
Ecl136II GAGCTC 1 cut(s) 570
EclXI CGGCCG 1 cut(s) 938
Eco130I CCWWGG 3 cut(s) 432, 453, 670
Eco24I GRGCYC 1 cut(s) 572
Eco32I GATATC 1 cut(s) 1078
Eco47I GGWCC 3 cut(s) 674, 765, 1226
Eco52I CGGCCG 1 cut(s) 938
Eco53kI GAGCTC 1 cut(s) 570
Eco72I CACGTG 1 cut(s) 221
Eco88I CYCGRG 1 cut(s) 1099
EcoICRI GAGCTC 1 cut(s) 570
EcoRV GATATC 1 cut(s) 1078
EcoT14I CCWWGG 3 cut(s) 432, 453, 670
EcoT22I ATGCAT 1 cut(s) 662
EcoT38I GRGCYC 1 cut(s) 572
ErhI CCWWGG 3 cut(s) 432, 453, 670
FaeI CATG 1 cut(s) 1124
FalI AAGNNNNNCTT 2 cut(s) 606, 638
FaqI GGGAC 2 cut(s) 1347, 1413
FatI CATG 1 cut(s) 1120
FauI CCCGC 1 cut(s) 1264
FauNDI CATATG 1 cut(s) 694
FbaI TGATCA 1 cut(s) 1147
FblI GTMKAC 1 cut(s) 726
Fnu4HI GCNGC 5 cut(s) 237, 248, 342, 429, 873
FokI GGATG 3 cut(s) 470, 608, 1251
FriOI GRGCYC 1 cut(s) 572
Fsp4HI GCNGC 5 cut(s) 237, 248, 342, 429, 873
FspBI CTAG 8 cut(s) 276, 423, 843, 1302, 1359, 1383, 1407, 1451
GlaI GCGC 1 cut(s) 565
GluI GCNGC 5 cut(s) 237, 248, 342, 429, 873
HaeIII GGCC 1 cut(s) 940
HapII CCGG 1 cut(s) 855
HgaI GACGC 1 cut(s) 16
HhaI GCGC 1 cut(s) 566
Hin1II CATG 1 cut(s) 1124
Hin6I GCGC 1 cut(s) 564
HinP1I GCGC 1 cut(s) 564
HindIII AAGCTT 3 cut(s) 52, 161, 719
HinfI GANTC 4 cut(s) 71, 122, 374, 1305
HpaII CCGG 1 cut(s) 855
HphI GGTGA 4 cut(s) 16, 1290, 1341, 1371
Hpy166II GTNNAC 2 cut(s) 727, 994
Hpy188I TCNGA 3 cut(s) 388, 471, 895
Hpy188III TCNNGA 7 cut(s) 22, 42, 402, 623, 855, 905, 1157
Hpy8I GTNNAC 2 cut(s) 727, 994
HpyAV CCTTC 7 cut(s) 25, 188, 319, 436, 457, 1185, 1356
HpyCH4III ACNGT 4 cut(s) 49, 643, 926, 1179
HpyCH4IV ACGT 1 cut(s) 220
HpyF10VI GCNNNNNNNGC 2 cut(s) 296, 869
HpyF3I CTNAG 8 cut(s) 347, 358, 468, 482, 759, 785, 976, 1186
HpySE526I ACGT 1 cut(s) 220
Hsp92II CATG 1 cut(s) 1124
HspAI GCGC 1 cut(s) 564
Kpn2I TCCGGA 1 cut(s) 854
Ksp22I TGATCA 1 cut(s) 1147
Kzo9I GATC 5 cut(s) 89, 505, 774, 1147, 1453
LmnI GCTCC 4 cut(s) 313, 982, 1220, 1269
Lsp1109I GCAGC 5 cut(s) 223, 234, 328, 415, 884
LweI GCATC 2 cut(s) 669, 800
MaeI CTAG 8 cut(s) 276, 423, 843, 1302, 1359, 1383, 1407, 1451
MaeII ACGT 1 cut(s) 220
MaeIII GTNAC 5 cut(s) 4, 266, 706, 748, 1296
MalI GATC 5 cut(s) 91, 507, 776, 1149, 1455
MboI GATC 5 cut(s) 89, 505, 774, 1147, 1453
MboII GAAGA 8 cut(s) 131, 574, 626, 829, 832, 959, 1181, 1428
MflI RGATCY 3 cut(s) 89, 774, 1453
MhlI GDGCHC 1 cut(s) 572
MluCI AATT 5 cut(s) 254, 473, 1233, 1268, 1426
MmeI TCCRAC 2 cut(s) 573, 580
Mph1103I ATGCAT 1 cut(s) 662
MroI TCCGGA 1 cut(s) 854
MseI TTAA 5 cut(s) 381, 558, 1421, 1430, 1483
MslI CAYNNNNRTG 1 cut(s) 519
MspI CCGG 1 cut(s) 855
MvnI CGCG 2 cut(s) 566, 812
MwoI GCNNNNNNNGC 2 cut(s) 296, 869
NdeI CATATG 1 cut(s) 694
NdeII GATC 5 cut(s) 89, 505, 774, 1147, 1453
NlaIII CATG 1 cut(s) 1124
NlaIV GGNNCC 3 cut(s) 743, 766, 862
NmuCI GTSAC 4 cut(s) 4, 706, 748, 1296
NsiI ATGCAT 1 cut(s) 662
NspI RCATGY 1 cut(s) 1124
PaeI GCATGC 1 cut(s) 1124
PfeI GAWTC 4 cut(s) 71, 122, 374, 1305
PflFI GACNNNGTC 1 cut(s) 1359
PkrI GCNGC 5 cut(s) 238, 249, 343, 430, 874
PmaCI CACGTG 1 cut(s) 221
PmlI CACGTG 1 cut(s) 221
Ppu21I YACGTR 1 cut(s) 221
PshAI GACNNNNGTC 1 cut(s) 1004
Psp124BI GAGCTC 1 cut(s) 572
PspCI CACGTG 1 cut(s) 221
PspN4I GGNNCC 3 cut(s) 743, 766, 862
PspPI GGNCC 3 cut(s) 674, 765, 1226
PstI CTGCAG 2 cut(s) 252, 397
PstNI CAGNNNCTG 2 cut(s) 392, 1223
PsuI RGATCY 3 cut(s) 89, 774, 1453
PsyI GACNNNGTC 1 cut(s) 1359
RsaI GTAC 2 cut(s) 668, 1105
RsaNI GTAC 2 cut(s) 667, 1104
RseI CAYNNNNRTG 1 cut(s) 519
SacI GAGCTC 1 cut(s) 572
SaqAI TTAA 5 cut(s) 381, 558, 1421, 1430, 1483
SatI GCNGC 5 cut(s) 237, 248, 342, 429, 873
Sau3AI GATC 5 cut(s) 89, 505, 774, 1147, 1453
Sau96I GGNCC 3 cut(s) 674, 765, 1226
ScaI AGTACT 1 cut(s) 1105
SduI GDGCHC 1 cut(s) 572
SfaNI GCATC 2 cut(s) 669, 800
SfcI CTRYAG 4 cut(s) 248, 393, 922, 1215
SinI GGWCC 3 cut(s) 674, 765, 1226
SmiMI CAYNNNNRTG 1 cut(s) 519
SmlI CTYRAG 4 cut(s) 494, 905, 1070, 1280
SmoI CTYRAG 4 cut(s) 494, 905, 1070, 1280
SphI GCATGC 1 cut(s) 1124
Sse9I AATT 5 cut(s) 254, 473, 1233, 1268, 1426
SsiI CCGC 2 cut(s) 812, 1257
SspMI CTAG 8 cut(s) 276, 423, 843, 1302, 1359, 1383, 1407, 1451
SstI GAGCTC 1 cut(s) 572
StyI CCWWGG 3 cut(s) 432, 453, 670
TaaI ACNGT 4 cut(s) 49, 643, 926, 1179
TaiI ACGT 1 cut(s) 223
TaqI TCGA 3 cut(s) 517, 794, 1231
TaqII GACCGA 1 cut(s) 691
TasI AATT 5 cut(s) 254, 473, 1233, 1268, 1426
TatI WGTACW 1 cut(s) 1103
TfiI GAWTC 4 cut(s) 71, 122, 374, 1305
Tru1I TTAA 5 cut(s) 381, 558, 1421, 1430, 1483
Tru9I TTAA 5 cut(s) 381, 558, 1421, 1430, 1483
TscAI CASTG 6 cut(s) 366, 718, 793, 931, 1138, 1347
TseFI GTSAC 4 cut(s) 4, 706, 748, 1296
TseI GCWGC 5 cut(s) 236, 247, 341, 428, 872
Tsp45I GTSAC 4 cut(s) 4, 706, 748, 1296
TspDTI ATGAA 4 cut(s) 246, 711, 1076, 1125
TspRI CASTG 6 cut(s) 366, 718, 793, 931, 1138, 1347
Tth111I GACNNNGTC 1 cut(s) 1359
VpaK11BI GGWCC 3 cut(s) 674, 765, 1226
XapI RAATTY 1 cut(s) 254
XceI RCATGY 1 cut(s) 1124
XmiI GTMKAC 1 cut(s) 726
XspI CTAG 8 cut(s) 276, 423, 843, 1302, 1359, 1383, 1407, 1451
ZrmI AGTACT 1 cut(s) 1105
Zsp2I ATGCAT 1 cut(s) 662
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.