Rh2CG423400

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000760
Physical Location & Seq
Reverse (-)
57761656 .. 57764167
2512 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG423400.1

Sequence Viewer

Length: 1074 bp
ATGTCAAGAACAGTTAGTTTTGAGAACCCCGATTCAAGCAACACCAACAGATCCGATGGCCTAGATACATTGGTTTTTGAAAAATCTGTATGCTACAAGAAAAGGAAAGCAGGACAACTAAAGCTCGATACTTCAACTTTGCTACCCAAGCTAGAAGGTTGTGTTTCTCCACAGACCCCACGCGAGCTTGATGAAGCTGCAATCAAGCTGCAGAAATTTTACAAGAGTTACCGAACTAGACGAAACCTTGCAGATTGTGCTGTTGTTGTCGAGGAGCTATGTGTCAAATGCATTGTGAGACAGAATGAGAGGGAAACATATGAAGTGATAGTGGCAAGTGGGAAGCTTGTATACAGACAAAGTAGCAACCTTGTGACTACTACTGAGGGTTCCAAATGGATCTTTGTTCTCAGTGCATCGAGGATTATGTATGTTGCGGAAAAGAAGAAAGGCTATTTCCAGCACTCCAGTTTTCTATCCGGAGGTGCCACAATTGCAGCGGGGAGATTAGTTGCTTCTGATGGGGTTCTTGAGGCTGTATGGTGCTACAGTGGTCATTATCGCCCGACAGAAGAGCACTTTTTGGAGTTCATTAGCTTCTTAGAGGAGCAACAGGTGGACTTGACAAATGTCAAAAAACATCCTATAGATGATGATATTCCACCTTCAGAATCTACCAGTAAAGATATGAGCACCCTTGAGGATATCCCATCGGCAAACATTGAGACGAGTACTAATGAAAATGAGCGTGCCGTTGACGCTTCCATAGTAAGTGATGACAATCAAGACATTGTGGAAGCACCAAAATTTGACTCGGGATCAGGGGGATTGCCTTGCAAATGGACTACAGGAGCTGGCCCTCGAATCGGATGTGTGAGAGACTACCCCGCACGGCTGCAATTTCAGGCACTTGAGCAAGTCAATCTGTCACCAAGAATCAAACCAGAACGCACTGCAAGCAATAACACCCCAGTGCCTTCACCAAGACCTAGTCCCAAGTTCCACTTATCACCTAGACTTGCATATATGGGACTTCCTAGCCCCAGAAGATTGCATAATTTGACTCCTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

357

Amino Acids

39.75

Weight (kDa)

7.0

Isoelectric Point (pI)

44.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 485
AccI GTMKAC 1 cut(s) 351
AccII CGCG 1 cut(s) 183
AccIII TCCGGA 1 cut(s) 479
AciI CCGC 3 cut(s) 437, 500, 888
AclWI GGATC 3 cut(s) 45, 407, 826
AcsI RAATTY 2 cut(s) 215, 806
AcuI CTGAAG 1 cut(s) 651
AfaI GTAC 1 cut(s) 733
AfiI CCNNNNNNNGG 1 cut(s) 866
AgsI TTSAA 3 cut(s) 36, 80, 135
AleI CACNNNNGTG 1 cut(s) 971
AluBI AGCT 9 cut(s) 124, 151, 187, 197, 208, 277, 346, 597, 854
AluI AGCT 9 cut(s) 124, 151, 187, 197, 208, 277, 346, 597, 854
Alw21I GWGCWC 2 cut(s) 579, 695
Alw26I GTCTC 3 cut(s) 292, 719, 873
AlwI GGATC 3 cut(s) 45, 407, 826
AlwNI CAGNNNCTG 1 cut(s) 854
Ama87I CYCGRG 1 cut(s) 814
Aor13HI TCCGGA 1 cut(s) 479
AoxI GGCC 2 cut(s) 58, 856
ApeKI GCWGC 4 cut(s) 197, 208, 497, 895
ApoI RAATTY 2 cut(s) 215, 806
AspS9I GGNCC 1 cut(s) 857
AsuHPI GGTGA 3 cut(s) 921, 972, 1002
AvaI CYCGRG 1 cut(s) 814
BaeI ACNNNNGTAYC 2 cut(s) 57, 90
BanI GGYRCC 1 cut(s) 485
BarI GAAGNNNNNNTAC 2 cut(s) 335, 367
Bbv12I GWGCWC 2 cut(s) 579, 695
BbvI GCAGC 4 cut(s) 184, 195, 509, 882
BccI CCATC 3 cut(s) 50, 515, 718
BceAI ACGGC 2 cut(s) 737, 908
BcoDI GTCTC 3 cut(s) 292, 719, 873
BfaI CTAG 6 cut(s) 62, 152, 237, 990, 1014, 1038
BfmI CTRYAG 4 cut(s) 209, 547, 645, 846
BisI GCNGC 4 cut(s) 198, 209, 498, 896
BlsI GCNGC 4 cut(s) 199, 210, 499, 897
BmcAI AGTACT 1 cut(s) 733
BmeT110I CYCGRG 1 cut(s) 814
BmgT120I GGNCC 1 cut(s) 857
BmiI GGNNCC 2 cut(s) 391, 487
BmrI ACTGGG 1 cut(s) 965
BmsI GCATC 1 cut(s) 425
BmuI ACTGGG 1 cut(s) 965
BoxI GACNNNNGTC 1 cut(s) 629
BpmI CTGGAG 1 cut(s) 451
BpuEI CTTGAG 3 cut(s) 551, 719, 932
BsaBI GATNNNNATC 1 cut(s) 780
BsaWI WCCGGW 1 cut(s) 479
Bsc4I CCNNNNNNNGG 1 cut(s) 866
Bse1I ACTGG 3 cut(s) 468, 678, 971
Bse8I GATNNNNATC 1 cut(s) 780
BseAI TCCGGA 1 cut(s) 479
BseGI GGATG 2 cut(s) 640, 875
BseJI GATNNNNATC 1 cut(s) 780
BseLI CCNNNNNNNGG 1 cut(s) 866
BseMII CTCAG 2 cut(s) 375, 424
BseNI ACTGG 3 cut(s) 468, 678, 971
BseRI GAGGAG 3 cut(s) 287, 620, 1056
BseXI GCAGC 4 cut(s) 184, 195, 509, 882
Bsh1236I CGCG 1 cut(s) 183
BshFI GGCC 2 cut(s) 60, 858
BshNI GGYRCC 1 cut(s) 485
BsiHKAI GWGCWC 2 cut(s) 579, 695
BsiHKCI CYCGRG 1 cut(s) 814
BsiSI CCGG 1 cut(s) 480
BslFI GGGAC 2 cut(s) 978, 1044
BslI CCNNNNNNNGG 1 cut(s) 866
BsmAI GTCTC 3 cut(s) 292, 719, 873
BsmBI CGTCTC 1 cut(s) 719
BsmFI GGGAC 2 cut(s) 978, 1044
BsnI GGCC 2 cut(s) 60, 858
BsoBI CYCGRG 1 cut(s) 814
Bsp1286I GDGCHC 2 cut(s) 579, 695
Bsp13I TCCGGA 1 cut(s) 479
Bsp143I GATC 3 cut(s) 50, 399, 818
BspACI CCGC 3 cut(s) 437, 500, 888
BspANI GGCC 2 cut(s) 60, 858
BspCNI CTCAG 2 cut(s) 376, 423
BspEI TCCGGA 1 cut(s) 479
BspFNI CGCG 1 cut(s) 183
BspLI GGNNCC 2 cut(s) 391, 487
BspMAI CTGCAG 1 cut(s) 213
BspPI GGATC 3 cut(s) 45, 407, 826
BspQI GCTCTTC 1 cut(s) 567
BspT107I GGYRCC 1 cut(s) 485
BsrI ACTGG 3 cut(s) 468, 678, 971
BssMI GATC 3 cut(s) 50, 399, 818
BssNAI GTATAC 1 cut(s) 352
Bst1107I GTATAC 1 cut(s) 352
Bst4CI ACNGT 2 cut(s) 13, 551
Bst6I CTCTTC 1 cut(s) 567
BstAPI GCANNNNNTGC 1 cut(s) 257
BstC8I GCNNGC 4 cut(s) 185, 750, 856, 958
BstDEI CTNAG 4 cut(s) 384, 410, 601, 1071
BstF5I GGATG 2 cut(s) 640, 875
BstFNI CGCG 1 cut(s) 183
BstKTI GATC 3 cut(s) 53, 402, 821
BstMAI GTCTC 3 cut(s) 292, 719, 873
BstMBI GATC 3 cut(s) 50, 399, 818
BstMWI GCNNNNNNNGC 5 cut(s) 148, 257, 494, 758, 957
BstPAI GACNNNNGTC 1 cut(s) 629
BstSFI CTRYAG 4 cut(s) 209, 547, 645, 846
BstUI CGCG 1 cut(s) 183
BstV1I GCAGC 4 cut(s) 184, 195, 509, 882
BstX2I RGATCY 2 cut(s) 50, 399
BstYI RGATCY 2 cut(s) 50, 399
BstZ17I GTATAC 1 cut(s) 352
BsuRI GGCC 2 cut(s) 60, 858
BtsCI GGATG 2 cut(s) 640, 875
BtsI GCAGTG 1 cut(s) 951
BtsIMutI CAGTG 4 cut(s) 418, 556, 951, 978
Cac8I GCNNGC 4 cut(s) 185, 750, 856, 958
CaiI CAGNNNCTG 1 cut(s) 854
Cfr13I GGNCC 1 cut(s) 857
CseI GACGC 1 cut(s) 767
Csp6I GTAC 1 cut(s) 732
CviQI GTAC 1 cut(s) 732
DdeI CTNAG 4 cut(s) 384, 410, 601, 1071
DpnI GATC 3 cut(s) 52, 401, 820
DpnII GATC 3 cut(s) 50, 399, 818
Eam1104I CTCTTC 1 cut(s) 567
EarI CTCTTC 1 cut(s) 567
Eco32I GATATC 1 cut(s) 706
Eco57I CTGAAG 1 cut(s) 651
Eco88I CYCGRG 1 cut(s) 814
EcoRV GATATC 1 cut(s) 706
EcoT22I ATGCAT 1 cut(s) 293
Esp3I CGTCTC 1 cut(s) 719
FalI AAGNNNNNCTT 2 cut(s) 989, 1021
FaqI GGGAC 2 cut(s) 978, 1044
FauI CCCGC 2 cut(s) 493, 895
FauNDI CATATG 1 cut(s) 319
FblI GTMKAC 1 cut(s) 351
Fnu4HI GCNGC 4 cut(s) 198, 209, 498, 896
FokI GGATG 2 cut(s) 627, 882
Fsp4HI GCNGC 4 cut(s) 198, 209, 498, 896
FspBI CTAG 6 cut(s) 62, 152, 237, 990, 1014, 1038
GluI GCNGC 4 cut(s) 198, 209, 498, 896
GsuI CTGGAG 1 cut(s) 451
HaeIII GGCC 2 cut(s) 60, 858
HapII CCGG 1 cut(s) 480
HgaI GACGC 1 cut(s) 767
HincII GTYRAC 1 cut(s) 757
HindII GTYRAC 1 cut(s) 757
HindIII AAGCTT 1 cut(s) 344
HinfI GANTC 6 cut(s) 32, 671, 812, 864, 936, 1063
HpaII CCGG 1 cut(s) 480
HphI GGTGA 3 cut(s) 921, 972, 1002
Hpy166II GTNNAC 3 cut(s) 352, 619, 757
Hpy188I TCNGA 4 cut(s) 55, 520, 670, 869
Hpy188III TCNNGA 5 cut(s) 6, 480, 530, 785, 816
Hpy8I GTNNAC 3 cut(s) 352, 619, 757
HpyAV CCTTC 3 cut(s) 149, 675, 987
HpyCH4III ACNGT 2 cut(s) 13, 551
HpyF10VI GCNNNNNNNGC 5 cut(s) 148, 257, 494, 758, 957
HpyF3I CTNAG 4 cut(s) 384, 410, 601, 1071
Kpn2I TCCGGA 1 cut(s) 479
Kzo9I GATC 3 cut(s) 50, 399, 818
LguI GCTCTTC 1 cut(s) 567
LmnI GCTCC 3 cut(s) 274, 607, 851
Lsp1109I GCAGC 4 cut(s) 184, 195, 509, 882
LweI GCATC 1 cut(s) 425
MaeI CTAG 6 cut(s) 62, 152, 237, 990, 1014, 1038
MaeIII GTNAC 3 cut(s) 227, 373, 927
MalI GATC 3 cut(s) 52, 401, 820
MboI GATC 3 cut(s) 50, 399, 818
MboII GAAGA 3 cut(s) 457, 584, 1059
MfeI CAATTG 1 cut(s) 492
MflI RGATCY 2 cut(s) 50, 399
MhlI GDGCHC 2 cut(s) 579, 695
MluCI AATT 5 cut(s) 215, 492, 806, 899, 1057
MlyI GAGTC 2 cut(s) 806, 1057
MnlI CCTC 9 cut(s) 265, 303, 379, 414, 476, 526, 598, 694, 870
Mph1103I ATGCAT 1 cut(s) 293
MroI TCCGGA 1 cut(s) 479
MslI CAYNNNNRTG 1 cut(s) 971
MspA1I CMGCKG 1 cut(s) 500
MspI CCGG 1 cut(s) 480
MunI CAATTG 1 cut(s) 492
MvnI CGCG 1 cut(s) 183
MwoI GCNNNNNNNGC 5 cut(s) 148, 257, 494, 758, 957
NdeI CATATG 1 cut(s) 319
NdeII GATC 3 cut(s) 50, 399, 818
NlaIV GGNNCC 2 cut(s) 391, 487
NmuCI GTSAC 2 cut(s) 373, 927
NsiI ATGCAT 1 cut(s) 293
OliI CACNNNNGTG 1 cut(s) 971
PciSI GCTCTTC 1 cut(s) 567
PfeI GAWTC 4 cut(s) 32, 671, 864, 936
PflFI GACNNNGTC 1 cut(s) 990
PkrI GCNGC 4 cut(s) 199, 210, 499, 897
PleI GAGTC 2 cut(s) 806, 1057
PpsI GAGTC 2 cut(s) 806, 1057
PshAI GACNNNNGTC 1 cut(s) 629
PspN4I GGNNCC 2 cut(s) 391, 487
PspPI GGNCC 1 cut(s) 857
PstI CTGCAG 1 cut(s) 213
PstNI CAGNNNCTG 1 cut(s) 854
PsuI RGATCY 2 cut(s) 50, 399
PsyI GACNNNGTC 1 cut(s) 990
RsaI GTAC 1 cut(s) 733
RsaNI GTAC 1 cut(s) 732
RseI CAYNNNNRTG 1 cut(s) 971
SapI GCTCTTC 1 cut(s) 567
SatI GCNGC 4 cut(s) 198, 209, 498, 896
Sau3AI GATC 3 cut(s) 50, 399, 818
Sau96I GGNCC 1 cut(s) 857
ScaI AGTACT 1 cut(s) 733
SchI GAGTC 2 cut(s) 806, 1057
SduI GDGCHC 2 cut(s) 579, 695
SfaNI GCATC 1 cut(s) 425
SfcI CTRYAG 4 cut(s) 209, 547, 645, 846
SmiMI CAYNNNNRTG 1 cut(s) 971
SmlI CTYRAG 3 cut(s) 530, 698, 911
SmoI CTYRAG 3 cut(s) 530, 698, 911
Sse9I AATT 5 cut(s) 215, 492, 806, 899, 1057
SsiI CCGC 3 cut(s) 437, 500, 888
SspMI CTAG 6 cut(s) 62, 152, 237, 990, 1014, 1038
TaaI ACNGT 2 cut(s) 13, 551
TaqI TCGA 4 cut(s) 126, 270, 419, 862
TasI AATT 5 cut(s) 215, 492, 806, 899, 1057
TatI WGTACW 1 cut(s) 731
TfiI GAWTC 4 cut(s) 32, 671, 864, 936
TscAI CASTG 4 cut(s) 418, 556, 958, 978
TseFI GTSAC 2 cut(s) 373, 927
TseI GCWGC 4 cut(s) 197, 208, 497, 895
Tsp45I GTSAC 2 cut(s) 373, 927
TspDTI ATGAA 4 cut(s) 207, 336, 580, 753
TspRI CASTG 4 cut(s) 418, 556, 958, 978
Tth111I GACNNNGTC 1 cut(s) 990
XapI RAATTY 2 cut(s) 215, 806
XmiI GTMKAC 1 cut(s) 351
XspI CTAG 6 cut(s) 62, 152, 237, 990, 1014, 1038
ZrmI AGTACT 1 cut(s) 733
Zsp2I ATGCAT 1 cut(s) 293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.