pycom15g05350

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
3200940 .. 3201519
580 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g05350.2

Sequence Viewer

Length: 411 bp
ATGGATAGAAATCGCGAAACAGTGCGGATTAGTGAGCTCGATGCTGCAGCAAATAAGATTCAGAAAGTCTATAGGAGTCACCGGATAAGACGTAACCTTTCGGGTTCTGTGGGTCTGGTTGAGGAACAATGTGGTAGGTGCAATGACTTAGGCGTTGCAGCTCCGGAACGAAGCTCAGAGTCCTTAAATATTGAGAAGCAGGAAACTGCTGTGTCACGGTGGCAGCGGGCTCGGACAAGGGCTGCCAAGATAGGGAAGGGTTTGAGCAAGGATGACAGGGCTCAGAAACTAGCTCTGCAACTCTGGCTTGAAGCTGTGAATCTGTGTGCTTCTAATTCAAATCTCTTTAGCTCATCTATTAAATTCGTCGGTTTGGTTCTTGTATTGTGCAAACCTGTTAGAGTTACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

137

Amino Acids

15.15

Weight (kDa)

10.03

Isoelectric Point (pI)

50.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 15
AccIII TCCGGA 1 cut(s) 163
AciI CCGC 2 cut(s) 25, 226
AcsI RAATTY 1 cut(s) 362
AfiI CCNNNNNNNGG 1 cut(s) 252
AgsI TTSAA 2 cut(s) 311, 339
AluBI AGCT 6 cut(s) 37, 161, 174, 293, 314, 351
AluI AGCT 6 cut(s) 37, 161, 174, 293, 314, 351
Alw21I GWGCWC 1 cut(s) 39
Aor13HI TCCGGA 1 cut(s) 163
ApeKI GCWGC 5 cut(s) 44, 47, 158, 223, 242
ApoI RAATTY 1 cut(s) 362
AsuHPI GGTGA 1 cut(s) 71
BanII GRGCYC 3 cut(s) 39, 232, 283
Bbv12I GWGCWC 1 cut(s) 39
BbvI GCAGC 5 cut(s) 31, 59, 170, 229, 235
BcgI CGANNNNNNTGC 2 cut(s) 212, 246
BfaI CTAG 1 cut(s) 290
BfmI CTRYAG 2 cut(s) 45, 70
BisI GCNGC 5 cut(s) 45, 48, 159, 224, 243
BlsI GCNGC 5 cut(s) 46, 49, 160, 225, 244
BmsI GCATC 1 cut(s) 31
BsaBI GATNNNNATC 1 cut(s) 9
BsaWI WCCGGW 2 cut(s) 81, 163
Bsc4I CCNNNNNNNGG 1 cut(s) 252
Bse3DI GCAATG 1 cut(s) 148
Bse8I GATNNNNATC 1 cut(s) 9
BseAI TCCGGA 1 cut(s) 163
BseGI GGATG 1 cut(s) 277
BseJI GATNNNNATC 1 cut(s) 9
BseLI CCNNNNNNNGG 1 cut(s) 252
BseMI GCAATG 1 cut(s) 148
BseMII CTCAG 2 cut(s) 189, 296
BseXI GCAGC 5 cut(s) 31, 59, 170, 229, 235
Bsh1236I CGCG 1 cut(s) 15
BsiHKAI GWGCWC 1 cut(s) 39
BsiSI CCGG 2 cut(s) 82, 164
BslI CCNNNNNNNGG 1 cut(s) 252
Bsp1286I GDGCHC 3 cut(s) 39, 232, 283
Bsp13I TCCGGA 1 cut(s) 163
Bsp68I TCGCGA 1 cut(s) 15
BspACI CCGC 2 cut(s) 25, 226
BspCNI CTCAG 2 cut(s) 188, 295
BspEI TCCGGA 1 cut(s) 163
BspFNI CGCG 1 cut(s) 15
BspMAI CTGCAG 1 cut(s) 49
BsrDI GCAATG 1 cut(s) 148
Bst4CI ACNGT 2 cut(s) 22, 219
BstC8I GCNNGC 1 cut(s) 228
BstDEI CTNAG 3 cut(s) 148, 175, 282
BstF5I GGATG 1 cut(s) 277
BstFNI CGCG 1 cut(s) 15
BstMWI GCNNNNNNNGC 1 cut(s) 304
BstSFI CTRYAG 2 cut(s) 45, 70
BstUI CGCG 1 cut(s) 15
BstV1I GCAGC 5 cut(s) 31, 59, 170, 229, 235
BtsCI GGATG 1 cut(s) 277
BtsIMutI CAGTG 1 cut(s) 27
BtuMI TCGCGA 1 cut(s) 15
Cac8I GCNNGC 1 cut(s) 228
DdeI CTNAG 3 cut(s) 148, 175, 282
Ecl136II GAGCTC 1 cut(s) 37
Eco24I GRGCYC 3 cut(s) 39, 232, 283
Eco53kI GAGCTC 1 cut(s) 37
EcoICRI GAGCTC 1 cut(s) 37
EcoT38I GRGCYC 3 cut(s) 39, 232, 283
FaiI YATR 1 cut(s) 72
FauI CCCGC 1 cut(s) 219
Fnu4HI GCNGC 5 cut(s) 45, 48, 159, 224, 243
FokI GGATG 1 cut(s) 284
FriOI GRGCYC 3 cut(s) 39, 232, 283
Fsp4HI GCNGC 5 cut(s) 45, 48, 159, 224, 243
FspBI CTAG 1 cut(s) 290
GluI GCNGC 5 cut(s) 45, 48, 159, 224, 243
HapII CCGG 2 cut(s) 82, 164
HinfI GANTC 4 cut(s) 58, 76, 179, 319
HpaII CCGG 2 cut(s) 82, 164
HphI GGTGA 1 cut(s) 71
Hpy188I TCNGA 4 cut(s) 63, 178, 234, 285
Hpy188III TCNNGA 2 cut(s) 14, 164
Hpy99I CGWCG 1 cut(s) 371
HpyAV CCTTC 1 cut(s) 250
HpyCH4III ACNGT 2 cut(s) 22, 219
HpyCH4IV ACGT 1 cut(s) 91
HpyCH4V TGCA 5 cut(s) 47, 141, 158, 298, 390
HpyF10VI GCNNNNNNNGC 1 cut(s) 304
HpyF3I CTNAG 3 cut(s) 148, 175, 282
HpySE526I ACGT 1 cut(s) 91
Kpn2I TCCGGA 1 cut(s) 163
LmnI GCTCC 1 cut(s) 166
LpnPI CCDG 6 cut(s) 95, 101, 177, 185, 262, 289
Lsp1109I GCAGC 5 cut(s) 31, 59, 170, 229, 235
LweI GCATC 1 cut(s) 31
MaeI CTAG 1 cut(s) 290
MaeII ACGT 1 cut(s) 91
MaeIII GTNAC 4 cut(s) 77, 92, 213, 403
MhlI GDGCHC 3 cut(s) 39, 232, 283
MluCI AATT 2 cut(s) 334, 362
MlyI GAGTC 2 cut(s) 85, 188
MnlI CCTC 1 cut(s) 115
MroI TCCGGA 1 cut(s) 163
MseI TTAA 3 cut(s) 185, 360, 409
MspA1I CMGCKG 1 cut(s) 226
MspI CCGG 2 cut(s) 82, 164
MvnI CGCG 1 cut(s) 15
MwoI GCNNNNNNNGC 1 cut(s) 304
NmuCI GTSAC 2 cut(s) 77, 213
NruI TCGCGA 1 cut(s) 15
PfeI GAWTC 2 cut(s) 58, 319
PkrI GCNGC 5 cut(s) 46, 49, 160, 225, 244
PleI GAGTC 2 cut(s) 84, 187
PpsI GAGTC 2 cut(s) 84, 187
Psp124BI GAGCTC 1 cut(s) 39
PstI CTGCAG 1 cut(s) 49
RruI TCGCGA 1 cut(s) 15
SacI GAGCTC 1 cut(s) 39
SaqAI TTAA 3 cut(s) 185, 360, 409
SatI GCNGC 5 cut(s) 45, 48, 159, 224, 243
SchI GAGTC 2 cut(s) 85, 188
SduI GDGCHC 3 cut(s) 39, 232, 283
SfaNI GCATC 1 cut(s) 31
SfcI CTRYAG 2 cut(s) 45, 70
Sse9I AATT 2 cut(s) 334, 362
SsiI CCGC 2 cut(s) 25, 226
SspI AATATT 1 cut(s) 190
SspMI CTAG 1 cut(s) 290
SstI GAGCTC 1 cut(s) 39
TaaI ACNGT 2 cut(s) 22, 219
TaiI ACGT 1 cut(s) 94
TaqI TCGA 1 cut(s) 39
TasI AATT 2 cut(s) 334, 362
TfiI GAWTC 2 cut(s) 58, 319
Tru1I TTAA 3 cut(s) 185, 360, 409
Tru9I TTAA 3 cut(s) 185, 360, 409
TscAI CASTG 1 cut(s) 27
TseFI GTSAC 2 cut(s) 77, 213
TseI GCWGC 5 cut(s) 44, 47, 158, 223, 242
Tsp45I GTSAC 2 cut(s) 77, 213
TspRI CASTG 1 cut(s) 27
XapI RAATTY 1 cut(s) 362
XspI CTAG 1 cut(s) 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.