Rh3CG098700

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0000760
Physical Location & Seq
Reverse (-)
7757866 .. 7760011
2146 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG098700.1

Sequence Viewer

Length: 1068 bp
ATGTCTTTCTCCAATGTTGAGTCTAACCAGTTGGATGGTGGCCTTGACAATGCTCTGTCTGAACCAGCAATCTTGTTTTTGCCTAGACTGGTTAGAGAGCTTGATGCTGCAGCAGTCAAAATTCAAAAGGTTTACAAGAGTTATCGAACTCGAAGAAACCTTGCAGATTGTGCAGTGGCGGCTGAGGAGCTATGGTGGAGAGATACGTTAGATTCTCCAGCGGGTGCTAAAGAGCTATGGTGGAAAACTTTAGATTCTGCAGCTCTCAAGCAGAGTTCTGTGTCATTCTTCAATGTTGAGAAGTCAGAAACCGCCGTTTCGCGGTGGATTGGAAAAGGTTTGTCTAAGGATGAGAACGCACAAATGTTAGCGCTTCAACATTGGCTTGAAGCTATTGATCCACGCCACCGGTATGGACACAATTTACATTTCTATTATGATTTGTGGTTTGAAAGTGAGAGCAGTCAGCCTTTCTTCTACTGGCTGGATGTTGGAGATGGCAAAGAAATAAATCTCGAGAGATGCTCGAGGACAGCTCTACAGCACCAATGCATCGAGTACCTTGGACCGAAAGAAAGGAAATCCCATGAAGTATTAGTGGAAAATGGCAAGCTAATGTATAAGCAAAGTGGGATGCTTGTGAATAGTAGTGAAGGTTCCAAATCGATATTCGTGCTAAGCACAACAAGGGCTTTGTATGTTGGTCAGAAGAAGGGTCAGTTTGACCATTTGAGTTTTCTATCTGGAGAAAACTCCATGGAATTCATCAGCTTCCTCCAAGATAACCATGTCGATCTCACTAATGTCAAGAGGTGTGCAATTGATGATGACTATCCTTCAATGAAGAAAACTGAAGGGGAACTAACAAAGCAAAACTCATTTAAGTCGACCCAATCGGATGGCGCAAACACATCAAATGTCGATGACTTGACCGAGAAGGCACCGATCCCCGCCGTTCGTTCGGAAGTTAATGATGGCAGTGCAAACCACCAATGTTCACCATGGGCATGCCCTTGCCTTGTCTACTGGAACTGGAGCCCGAATCGGGTGTTTGCGAGACTACCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

355

Amino Acids

40.34

Weight (kDa)

5.78

Isoelectric Point (pI)

47.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 940
AccI GTMKAC 2 cut(s) 887, 1023
AccII CGCG 1 cut(s) 322
AciI CCGC 5 cut(s) 179, 221, 312, 322, 951
AclWI GGATC 2 cut(s) 392, 940
AcsI RAATTY 2 cut(s) 120, 761
AcuI CTGAAG 1 cut(s) 873
AfaI GTAC 1 cut(s) 560
AfeI AGCGCT 1 cut(s) 372
AfiI CCNNNNNNNGG 2 cut(s) 321, 1045
AgeI ACCGGT 1 cut(s) 408
AgsI TTSAA 6 cut(s) 125, 292, 377, 389, 452, 840
AjuI GAANNNNNNNTTGG 2 cut(s) 653, 685
AluBI AGCT 8 cut(s) 100, 190, 235, 263, 392, 536, 613, 771
AluI AGCT 8 cut(s) 100, 190, 235, 263, 392, 536, 613, 771
Alw26I GTCTC 1 cut(s) 1051
AlwI GGATC 2 cut(s) 392, 940
Ama87I CYCGRG 2 cut(s) 515, 526
Aor51HI AGCGCT 1 cut(s) 372
AoxI GGCC 1 cut(s) 40
ApeKI GCWGC 3 cut(s) 107, 110, 260
ApoI RAATTY 2 cut(s) 120, 761
AsiGI ACCGGT 1 cut(s) 408
AspLEI GCGC 2 cut(s) 373, 905
AspS9I GGNCC 1 cut(s) 566
AsuHPI GGTGA 1 cut(s) 990
AvaI CYCGRG 2 cut(s) 515, 526
AvaII GGWCC 1 cut(s) 566
BanI GGYRCC 1 cut(s) 940
BanII GRGCYC 1 cut(s) 1040
BbvCI CCTCAGC 1 cut(s) 183
BbvI GCAGC 3 cut(s) 94, 122, 272
BccI CCATC 4 cut(s) 29, 491, 893, 968
BceAI ACGGC 2 cut(s) 299, 938
BcgI CGANNNNNNTGC 2 cut(s) 655, 689
BcoDI GTCTC 1 cut(s) 1051
BfaI CTAG 2 cut(s) 84, 1066
BfmI CTRYAG 3 cut(s) 108, 258, 539
BfoI RGCGCY 1 cut(s) 374
BisI GCNGC 4 cut(s) 108, 111, 180, 261
BlpI GCTNAGC 1 cut(s) 677
BlsI GCNGC 4 cut(s) 109, 112, 181, 262
Bme18I GGWCC 1 cut(s) 566
BmeT110I CYCGRG 2 cut(s) 515, 526
BmgT120I GGNCC 1 cut(s) 566
BmiI GGNNCC 3 cut(s) 658, 942, 1037
BmsI GCATC 4 cut(s) 94, 512, 561, 624
BplI GAGNNNNNCTC 4 cut(s) 509, 541, 520, 552
BpmI CTGGAG 3 cut(s) 201, 765, 1054
Bpu10I CCTNAGC 1 cut(s) 183
Bpu1102I GCTNAGC 1 cut(s) 677
BpuEI CTTGAG 1 cut(s) 251
Bsa29I ATCGAT 1 cut(s) 665
BsaBI GATNNNNATC 1 cut(s) 831
BsaJI CCNNGG 3 cut(s) 562, 756, 1001
BsaWI WCCGGW 1 cut(s) 408
BsaXI ACNNNNNCTCC 2 cut(s) 179, 209
Bsc4I CCNNNNNNNGG 2 cut(s) 321, 1045
Bse118I RCCGGY 1 cut(s) 408
Bse1I ACTGG 5 cut(s) 28, 93, 485, 1031, 1037
Bse8I GATNNNNATC 1 cut(s) 831
BseCI ATCGAT 1 cut(s) 665
BseDI CCNNGG 3 cut(s) 562, 756, 1001
BseGI GGATG 5 cut(s) 40, 355, 493, 639, 904
BseJI GATNNNNATC 1 cut(s) 831
BseLI CCNNNNNNNGG 2 cut(s) 321, 1045
BseMII CTCAG 1 cut(s) 174
BseNI ACTGG 5 cut(s) 28, 93, 485, 1031, 1037
BseRI GAGGAG 1 cut(s) 200
BseXI GCAGC 3 cut(s) 94, 122, 272
BsgI GTGCAG 1 cut(s) 192
Bsh1236I CGCG 1 cut(s) 322
BshFI GGCC 1 cut(s) 42
BshNI GGYRCC 1 cut(s) 940
BshTI ACCGGT 1 cut(s) 408
BshVI ATCGAT 1 cut(s) 665
BsiHKCI CYCGRG 2 cut(s) 515, 526
BsiSI CCGG 1 cut(s) 409
BslI CCNNNNNNNGG 2 cut(s) 321, 1045
BsmAI GTCTC 1 cut(s) 1051
BsnI GGCC 1 cut(s) 42
BsoBI CYCGRG 2 cut(s) 515, 526
Bsp1286I GDGCHC 1 cut(s) 1040
Bsp143I GATC 3 cut(s) 397, 793, 945
Bsp1720I GCTNAGC 1 cut(s) 677
Bsp19I CCATGG 2 cut(s) 756, 1001
BspACI CCGC 5 cut(s) 179, 221, 312, 322, 951
BspANI GGCC 1 cut(s) 42
BspCNI CTCAG 1 cut(s) 175
BspDI ATCGAT 1 cut(s) 665
BspFNI CGCG 1 cut(s) 322
BspLI GGNNCC 3 cut(s) 658, 942, 1037
BspMAI CTGCAG 2 cut(s) 112, 262
BspPI GGATC 2 cut(s) 392, 940
BspT107I GGYRCC 1 cut(s) 940
BsrFI RCCGGY 1 cut(s) 408
BsrI ACTGG 5 cut(s) 28, 93, 485, 1031, 1037
BssAI RCCGGY 1 cut(s) 408
BssECI CCNNGG 3 cut(s) 562, 756, 1001
BssMI GATC 3 cut(s) 397, 793, 945
BssT1I CCWWGG 3 cut(s) 562, 756, 1001
BstAPI GCANNNNNTGC 1 cut(s) 170
BstC8I GCNNGC 2 cut(s) 611, 1009
BstDEI CTNAG 3 cut(s) 183, 345, 677
BstDSI CCRYGG 2 cut(s) 756, 1001
BstF5I GGATG 5 cut(s) 40, 355, 493, 639, 904
BstFNI CGCG 1 cut(s) 322
BstH2I RGCGCY 1 cut(s) 374
BstHHI GCGC 2 cut(s) 373, 905
BstKTI GATC 3 cut(s) 400, 796, 948
BstMAI GTCTC 1 cut(s) 1051
BstMBI GATC 3 cut(s) 397, 793, 945
BstMWI GCNNNNNNNGC 2 cut(s) 170, 179
BstNSI RCATGY 1 cut(s) 1011
BstSFI CTRYAG 3 cut(s) 108, 258, 539
BstUI CGCG 1 cut(s) 322
BstV1I GCAGC 3 cut(s) 94, 122, 272
BstXI CCANNNNNNTGG 3 cut(s) 35, 413, 899
Bsu15I ATCGAT 1 cut(s) 665
BsuRI GGCC 1 cut(s) 42
BsuTUI ATCGAT 1 cut(s) 665
BtgI CCRYGG 2 cut(s) 756, 1001
BtsCI GGATG 5 cut(s) 40, 355, 493, 639, 904
BtsI GCAGTG 2 cut(s) 180, 985
BtsIMutI CAGTG 2 cut(s) 180, 985
Cac8I GCNNGC 2 cut(s) 611, 1009
CfoI GCGC 2 cut(s) 373, 905
Cfr10I RCCGGY 1 cut(s) 408
Cfr13I GGNCC 1 cut(s) 566
ClaI ATCGAT 1 cut(s) 665
Csp6I GTAC 1 cut(s) 559
CspAI ACCGGT 1 cut(s) 408
CviAII CATG 5 cut(s) 587, 757, 788, 1002, 1008
CviQI GTAC 1 cut(s) 559
DdeI CTNAG 3 cut(s) 183, 345, 677
DpnI GATC 3 cut(s) 399, 795, 947
DpnII GATC 3 cut(s) 397, 793, 945
Eco130I CCWWGG 3 cut(s) 562, 756, 1001
Eco24I GRGCYC 1 cut(s) 1040
Eco47I GGWCC 1 cut(s) 566
Eco47III AGCGCT 1 cut(s) 372
Eco57I CTGAAG 1 cut(s) 873
Eco88I CYCGRG 2 cut(s) 515, 526
EcoRI GAATTC 1 cut(s) 761
EcoT14I CCWWGG 3 cut(s) 562, 756, 1001
EcoT22I ATGCAT 1 cut(s) 554
EcoT38I GRGCYC 1 cut(s) 1040
ErhI CCWWGG 3 cut(s) 562, 756, 1001
FaeI CATG 5 cut(s) 590, 760, 791, 1005, 1011
FatI CATG 5 cut(s) 586, 756, 787, 1001, 1007
FauI CCCGC 2 cut(s) 214, 958
FblI GTMKAC 2 cut(s) 887, 1023
Fnu4HI GCNGC 4 cut(s) 108, 111, 180, 261
FokI GGATG 5 cut(s) 47, 362, 500, 646, 911
FriOI GRGCYC 1 cut(s) 1040
Fsp4HI GCNGC 4 cut(s) 108, 111, 180, 261
FspBI CTAG 2 cut(s) 84, 1066
GlaI GCGC 2 cut(s) 372, 904
GluI GCNGC 4 cut(s) 108, 111, 180, 261
GsuI CTGGAG 3 cut(s) 201, 765, 1054
HaeII RGCGCY 1 cut(s) 374
HaeIII GGCC 1 cut(s) 42
HapII CCGG 1 cut(s) 409
HhaI GCGC 2 cut(s) 373, 905
Hin1II CATG 5 cut(s) 590, 760, 791, 1005, 1011
Hin6I GCGC 2 cut(s) 371, 903
HinP1I GCGC 2 cut(s) 371, 903
HincII GTYRAC 1 cut(s) 888
HindII GTYRAC 1 cut(s) 888
HinfI GANTC 4 cut(s) 20, 212, 254, 1042
HpaII CCGG 1 cut(s) 409
HphI GGTGA 1 cut(s) 990
Hpy166II GTNNAC 4 cut(s) 133, 888, 998, 1024
Hpy188I TCNGA 5 cut(s) 61, 307, 708, 898, 964
Hpy188III TCNNGA 4 cut(s) 515, 517, 744, 808
Hpy8I GTNNAC 4 cut(s) 133, 888, 998, 1024
HpyAV CCTTC 5 cut(s) 647, 706, 846, 848, 931
HpyCH4IV ACGT 1 cut(s) 206
HpyCH4V TGCA 7 cut(s) 110, 164, 173, 260, 552, 818, 983
HpyF10VI GCNNNNNNNGC 2 cut(s) 170, 179
HpyF3I CTNAG 3 cut(s) 183, 345, 677
HpySE526I ACGT 1 cut(s) 206
Hsp92II CATG 5 cut(s) 590, 760, 791, 1005, 1011
HspAI GCGC 2 cut(s) 371, 903
Kzo9I GATC 3 cut(s) 397, 793, 945
LmnI GCTCC 2 cut(s) 187, 1035
Lsp1109I GCAGC 3 cut(s) 94, 122, 272
LweI GCATC 4 cut(s) 94, 512, 561, 624
MaeI CTAG 2 cut(s) 84, 1066
MaeII ACGT 1 cut(s) 206
MalI GATC 3 cut(s) 399, 795, 947
MboI GATC 3 cut(s) 397, 793, 945
MboII GAAGA 5 cut(s) 165, 280, 466, 721, 856
MfeI CAATTG 1 cut(s) 819
MhlI GDGCHC 1 cut(s) 1040
MluCI AATT 4 cut(s) 120, 421, 761, 819
MlyI GAGTC 1 cut(s) 29
MmeI TCCRAC 2 cut(s) 12, 472
MnlI CCTC 4 cut(s) 178, 522, 785, 804
Mph1103I ATGCAT 1 cut(s) 554
MseI TTAA 2 cut(s) 882, 969
MslI CAYNNNNRTG 2 cut(s) 411, 1006
MspA1I CMGCKG 1 cut(s) 221
MspI CCGG 1 cut(s) 409
MunI CAATTG 1 cut(s) 819
MvnI CGCG 1 cut(s) 322
MwoI GCNNNNNNNGC 2 cut(s) 170, 179
NcoI CCATGG 2 cut(s) 756, 1001
NdeII GATC 3 cut(s) 397, 793, 945
NlaIII CATG 5 cut(s) 590, 760, 791, 1005, 1011
NlaIV GGNNCC 3 cut(s) 658, 942, 1037
NsiI ATGCAT 1 cut(s) 554
NspI RCATGY 1 cut(s) 1011
PaeI GCATGC 1 cut(s) 1011
PaeR7I CTCGAG 2 cut(s) 515, 526
PfeI GAWTC 3 cut(s) 212, 254, 1042
PinAI ACCGGT 1 cut(s) 408
PkrI GCNGC 4 cut(s) 109, 112, 181, 262
PleI GAGTC 1 cut(s) 28
PpsI GAGTC 1 cut(s) 28
PspN4I GGNNCC 3 cut(s) 658, 942, 1037
PspPI GGNCC 1 cut(s) 566
PspXI VCTCGAGB 1 cut(s) 526
PsrI GAACNNNNNNTAC 2 cut(s) 640, 672
PstI CTGCAG 2 cut(s) 112, 262
RsaI GTAC 1 cut(s) 560
RsaNI GTAC 1 cut(s) 559
RseI CAYNNNNRTG 2 cut(s) 411, 1006
SalI GTCGAC 1 cut(s) 886
SaqAI TTAA 2 cut(s) 882, 969
SatI GCNGC 4 cut(s) 108, 111, 180, 261
Sau3AI GATC 3 cut(s) 397, 793, 945
Sau96I GGNCC 1 cut(s) 566
SchI GAGTC 1 cut(s) 29
SduI GDGCHC 1 cut(s) 1040
SfaNI GCATC 4 cut(s) 94, 512, 561, 624
SfcI CTRYAG 3 cut(s) 108, 258, 539
Sfr274I CTCGAG 2 cut(s) 515, 526
SinI GGWCC 1 cut(s) 566
SlaI CTCGAG 2 cut(s) 515, 526
SmiMI CAYNNNNRTG 2 cut(s) 411, 1006
SmlI CTYRAG 3 cut(s) 266, 515, 526
SmoI CTYRAG 3 cut(s) 266, 515, 526
SphI GCATGC 1 cut(s) 1011
Sse9I AATT 4 cut(s) 120, 421, 761, 819
SsiI CCGC 5 cut(s) 179, 221, 312, 322, 951
SspMI CTAG 2 cut(s) 84, 1066
StyI CCWWGG 3 cut(s) 562, 756, 1001
TaiI ACGT 1 cut(s) 209
TaqI TCGA 9 cut(s) 145, 151, 516, 527, 555, 665, 792, 887, 921
TaqII GACCGA 2 cut(s) 583, 947
TasI AATT 4 cut(s) 120, 421, 761, 819
TauI GCSGC 1 cut(s) 182
TfiI GAWTC 3 cut(s) 212, 254, 1042
Tru1I TTAA 2 cut(s) 882, 969
Tru9I TTAA 2 cut(s) 882, 969
TscAI CASTG 2 cut(s) 180, 985
TseI GCWGC 3 cut(s) 107, 110, 260
TspDTI ATGAA 3 cut(s) 603, 754, 857
TspRI CASTG 2 cut(s) 180, 985
VpaK11BI GGWCC 1 cut(s) 566
XapI RAATTY 2 cut(s) 120, 761
XceI RCATGY 1 cut(s) 1011
XcmI CCANNNNNNNNNTGG 1 cut(s) 35
XhoI CTCGAG 2 cut(s) 515, 526
XmiI GTMKAC 2 cut(s) 887, 1023
XspI CTAG 2 cut(s) 84, 1066
Zsp2I ATGCAT 1 cut(s) 554
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.