Rh6CG181500

monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0000760
Physical Location & Seq
Forward (+)
29045390 .. 29054702
9313 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG181500.1

Sequence Viewer

Length: 576 bp
ATGTTGGGGACAGAAGATTGTAGAGGTAAAAATCAGTTGAAACATAAACCAATGTCGGCTTTTGCTCTGTCTCAACCGGATTTTATGTTTTTGCCTAGACCGGTTAAGGAGCTTAATGATGCAGCAGTCAAAGTTCAGAAGGTTTACAAGAGTTATCGAACTCGAAGAAACCTTGCAGATTGTGCAGTGGTGGCTGAGGAGATTCATTTTTTGTCAAGGAGGATGATGTACTGGGCCGTGGTTTTGGTGAGATATCTATCATTAAGCAAAGTGGAATCTTTGATGGTTTTGCTTAGCAAGCTGGTCTATGGAGACATGACCAAGTATGGAATAGCCAGGCCAAAAGAGGGCCCTTTCTCTATGAAGATCAAGTACGGGAAGTATCCCATCATTGATGTCGGCACCTGTAGTAAGATCAAGTCCGGCGAGATTCAGACTTTCAATTCCCAGGATTTTAAGAATCCACACTTCCAAAGCGATCAAAATCCCTCAATCAAAGGGTATGGAATTCATTACATATCAATCAAATATTCAAACTGTGGGCATATTCATTTGATAGCTGGAGAAGATGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00380 ko01100 map00380 map01100
Pfam Domains
Protein Families
FMO-like K_oxygenase Pyr_redox_3

Protein Analysis

191

Amino Acids

21.82

Weight (kDa)

9.41

Isoelectric Point (pI)

28.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 401
AcsI RAATTY 1 cut(s) 507
AfaI GTAC 2 cut(s) 230, 374
AfiI CCNNNNNNNGG 1 cut(s) 347
AgeI ACCGGT 1 cut(s) 100
AgsI TTSAA 3 cut(s) 40, 442, 534
AjnI CCWGG 2 cut(s) 335, 447
AluBI AGCT 3 cut(s) 112, 301, 560
AluI AGCT 3 cut(s) 112, 301, 560
Alw26I GTCTC 2 cut(s) 75, 306
AoxI GGCC 3 cut(s) 234, 338, 349
ApaI GGGCCC 1 cut(s) 353
ApeKI GCWGC 1 cut(s) 122
ApoI RAATTY 1 cut(s) 507
AsiGI ACCGGT 1 cut(s) 100
AspS9I GGNCC 3 cut(s) 234, 349, 350
AsuHPI GGTGA 1 cut(s) 259
BaeGI GKGCMC 1 cut(s) 353
BanI GGYRCC 1 cut(s) 401
BanII GRGCYC 1 cut(s) 353
BarI GAAGNNNNNNTAC 2 cut(s) 356, 388
BbvCI CCTCAGC 1 cut(s) 195
BbvI GCAGC 1 cut(s) 134
BccI CCATC 2 cut(s) 277, 395
BceAI ACGGC 1 cut(s) 221
BciT130I CCWGG 2 cut(s) 337, 449
BciVI GTATCC 1 cut(s) 393
BcoDI GTCTC 2 cut(s) 75, 306
BfaI CTAG 1 cut(s) 96
BfmI CTRYAG 1 cut(s) 406
BfuI GTATCC 1 cut(s) 393
BisI GCNGC 1 cut(s) 123
BlpI GCTNAGC 1 cut(s) 293
BlsI GCNGC 1 cut(s) 124
Bme1390I CCNGG 2 cut(s) 337, 449
BmgT120I GGNCC 3 cut(s) 234, 349, 350
BmiI GGNNCC 2 cut(s) 351, 403
BmrFI CCNGG 2 cut(s) 337, 449
BmrI ACTGGG 1 cut(s) 241
BmsI GCATC 1 cut(s) 109
BmuI ACTGGG 1 cut(s) 241
Bpu10I CCTNAGC 1 cut(s) 195
Bpu1102I GCTNAGC 1 cut(s) 293
BsaBI GATNNNNATC 2 cut(s) 256, 483
BsaJI CCNNGG 2 cut(s) 237, 447
BsaWI WCCGGW 2 cut(s) 76, 100
Bsc4I CCNNNNNNNGG 1 cut(s) 347
Bse118I RCCGGY 1 cut(s) 100
Bse1I ACTGG 1 cut(s) 236
Bse8I GATNNNNATC 2 cut(s) 256, 483
BseBI CCWGG 2 cut(s) 337, 449
BseDI CCNNGG 2 cut(s) 237, 447
BseGI GGATG 1 cut(s) 228
BseJI GATNNNNATC 2 cut(s) 256, 483
BseLI CCNNNNNNNGG 1 cut(s) 347
BseMII CTCAG 1 cut(s) 186
BseNI ACTGG 1 cut(s) 236
BseRI GAGGAG 1 cut(s) 212
BseSI GKGCMC 1 cut(s) 353
BseXI GCAGC 1 cut(s) 134
BsgI GTGCAG 1 cut(s) 204
BshFI GGCC 3 cut(s) 236, 340, 351
BshNI GGYRCC 1 cut(s) 401
BshTI ACCGGT 1 cut(s) 100
BsiSI CCGG 3 cut(s) 77, 101, 423
BslFI GGGAC 1 cut(s) 22
BslI CCNNNNNNNGG 1 cut(s) 347
BsmAI GTCTC 2 cut(s) 75, 306
BsmFI GGGAC 1 cut(s) 22
BsnI GGCC 3 cut(s) 236, 340, 351
Bsp120I GGGCCC 1 cut(s) 349
Bsp1286I GDGCHC 1 cut(s) 353
Bsp143I GATC 3 cut(s) 366, 414, 478
Bsp1720I GCTNAGC 1 cut(s) 293
BspANI GGCC 3 cut(s) 236, 340, 351
BspCNI CTCAG 1 cut(s) 187
BspLI GGNNCC 2 cut(s) 351, 403
BspT107I GGYRCC 1 cut(s) 401
BsrFI RCCGGY 1 cut(s) 100
BsrI ACTGG 1 cut(s) 236
BssAI RCCGGY 1 cut(s) 100
BssECI CCNNGG 2 cut(s) 237, 447
BssMI GATC 3 cut(s) 366, 414, 478
Bst2UI CCWGG 2 cut(s) 337, 449
Bst4CI ACNGT 1 cut(s) 539
BstAPI GCANNNNNTGC 1 cut(s) 182
BstC8I GCNNGC 1 cut(s) 299
BstDEI CTNAG 2 cut(s) 195, 293
BstDSI CCRYGG 1 cut(s) 237
BstF5I GGATG 1 cut(s) 228
BstKTI GATC 3 cut(s) 369, 417, 481
BstMAI GTCTC 2 cut(s) 75, 306
BstMBI GATC 3 cut(s) 366, 414, 478
BstMWI GCNNNNNNNGC 3 cut(s) 182, 191, 298
BstNI CCWGG 2 cut(s) 337, 449
BstSCI CCNGG 2 cut(s) 335, 447
BstSFI CTRYAG 1 cut(s) 406
BstSLI GKGCMC 1 cut(s) 353
BstV1I GCAGC 1 cut(s) 134
BsuI GTATCC 1 cut(s) 393
BsuRI GGCC 3 cut(s) 236, 340, 351
BtgI CCRYGG 1 cut(s) 237
BtsCI GGATG 1 cut(s) 228
BtsI GCAGTG 1 cut(s) 192
BtsIMutI CAGTG 1 cut(s) 192
Cac8I GCNNGC 1 cut(s) 299
Cfr10I RCCGGY 1 cut(s) 100
Cfr13I GGNCC 3 cut(s) 234, 349, 350
Csp6I GTAC 2 cut(s) 229, 373
CspAI ACCGGT 1 cut(s) 100
CviAII CATG 1 cut(s) 316
CviJI RGCY 9 cut(s) 59, 112, 194, 236, 301, 335, 340, 351, 560
CviKI_1 RGCY 9 cut(s) 59, 112, 194, 236, 301, 335, 340, 351, 560
CviQI GTAC 2 cut(s) 229, 373
DdeI CTNAG 2 cut(s) 195, 293
DpnI GATC 3 cut(s) 368, 416, 480
DpnII GATC 3 cut(s) 366, 414, 478
Eco24I GRGCYC 1 cut(s) 353
Eco32I GATATC 1 cut(s) 254
EcoO109I RGGNCCY 2 cut(s) 349, 350
EcoRI GAATTC 1 cut(s) 507
EcoRII CCWGG 2 cut(s) 335, 447
EcoRV GATATC 1 cut(s) 254
EcoT38I GRGCYC 1 cut(s) 353
FaeI CATG 1 cut(s) 319
FaiI YATR 9 cut(s) 45, 86, 309, 317, 327, 362, 504, 518, 546
FaqI GGGAC 1 cut(s) 22
FatI CATG 1 cut(s) 315
Fnu4HI GCNGC 1 cut(s) 123
FokI GGATG 1 cut(s) 235
FriOI GRGCYC 1 cut(s) 353
Fsp4HI GCNGC 1 cut(s) 123
FspBI CTAG 1 cut(s) 96
GluI GCNGC 1 cut(s) 123
HaeIII GGCC 3 cut(s) 236, 340, 351
HapII CCGG 3 cut(s) 77, 101, 423
Hin1II CATG 1 cut(s) 319
HinfI GANTC 4 cut(s) 202, 275, 430, 460
HpaII CCGG 3 cut(s) 77, 101, 423
HphI GGTGA 1 cut(s) 259
Hpy166II GTNNAC 1 cut(s) 145
Hpy188I TCNGA 2 cut(s) 138, 435
Hpy8I GTNNAC 1 cut(s) 145
HpyAV CCTTC 1 cut(s) 133
HpyCH4III ACNGT 1 cut(s) 539
HpyCH4V TGCA 3 cut(s) 122, 176, 185
HpyF10VI GCNNNNNNNGC 3 cut(s) 182, 191, 298
HpyF3I CTNAG 2 cut(s) 195, 293
Hsp92II CATG 1 cut(s) 319
Kzo9I GATC 3 cut(s) 366, 414, 478
LmnI GCTCC 1 cut(s) 109
Lsp1109I GCAGC 1 cut(s) 134
LweI GCATC 1 cut(s) 109
MaeI CTAG 1 cut(s) 96
MalI GATC 3 cut(s) 368, 416, 480
MboI GATC 3 cut(s) 366, 414, 478
MboII GAAGA 3 cut(s) 26, 177, 376
MhlI GDGCHC 1 cut(s) 353
MluCI AATT 2 cut(s) 442, 507
MnlI CCTC 5 cut(s) 17, 190, 213, 340, 499
MseI TTAA 4 cut(s) 105, 114, 263, 456
MspI CCGG 3 cut(s) 77, 101, 423
MspR9I CCNGG 2 cut(s) 337, 449
MvaI CCWGG 2 cut(s) 337, 449
MwoI GCNNNNNNNGC 3 cut(s) 182, 191, 298
NdeII GATC 3 cut(s) 366, 414, 478
NlaIII CATG 1 cut(s) 319
NlaIV GGNNCC 2 cut(s) 351, 403
PfeI GAWTC 4 cut(s) 202, 275, 430, 460
PinAI ACCGGT 1 cut(s) 100
PkrI GCNGC 1 cut(s) 124
Psp6I CCWGG 2 cut(s) 335, 447
PspGI CCWGG 2 cut(s) 335, 447
PspN4I GGNNCC 2 cut(s) 351, 403
PspOMI GGGCCC 1 cut(s) 349
PspPI GGNCC 3 cut(s) 234, 349, 350
RsaI GTAC 2 cut(s) 230, 374
RsaNI GTAC 2 cut(s) 229, 373
SaqAI TTAA 4 cut(s) 105, 114, 263, 456
SatI GCNGC 1 cut(s) 123
Sau3AI GATC 3 cut(s) 366, 414, 478
Sau96I GGNCC 3 cut(s) 234, 349, 350
ScrFI CCNGG 2 cut(s) 337, 449
SduI GDGCHC 1 cut(s) 353
SetI ASST 7 cut(s) 28, 114, 144, 174, 303, 407, 562
SfaNI GCATC 1 cut(s) 109
SfcI CTRYAG 1 cut(s) 406
Sse9I AATT 2 cut(s) 442, 507
SspI AATATT 1 cut(s) 530
SspMI CTAG 1 cut(s) 96
StyD4I CCNGG 2 cut(s) 335, 447
TaaI ACNGT 1 cut(s) 539
TaqI TCGA 2 cut(s) 157, 163
TasI AATT 2 cut(s) 442, 507
TatI WGTACW 1 cut(s) 228
TfiI GAWTC 4 cut(s) 202, 275, 430, 460
Tru1I TTAA 4 cut(s) 105, 114, 263, 456
Tru9I TTAA 4 cut(s) 105, 114, 263, 456
TscAI CASTG 1 cut(s) 192
TseI GCWGC 1 cut(s) 122
TspDTI ATGAA 4 cut(s) 194, 377, 500, 539
TspRI CASTG 1 cut(s) 192
XapI RAATTY 1 cut(s) 507
XspI CTAG 1 cut(s) 96
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.