Rmu_sc0025366.1_g000002

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0025366.1
OG0000760
Physical Location & Seq
Forward (+)
5495 .. 6184
690 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0025366.1_g000002.1.cds

Sequence Viewer

Length: 594 bp
atggagataatgagattcactaccttgaatgtggattttcttatgatacaaacacatatttctgaggcacatgcattttgttttgacagaacttgtagaatggcgacaatgacatctatcagtttagtgtccaagagaacgaaggtgatgtcaagaacagttagttttgagaaccccgactcaagcaacactaacagatccgatggcctagatacattggtttttgaaaaatctgtatgctacaagaaaaggaaagcagggcaactaaagctcgatacttcaactttgctacccaagctagaaggttgtgtttctctacagaccccacgagagcttgatgaagctgcaatcaagctgcagaaattttacaagagttaccgaactagacgaaaccttgcagattgtgctgttgttgtcgaggagctatggtggaaggcattagactttgctgcacttaggcggagctctgtctcattctttgaatctgttgaatcagaaactgcagtttccagatgggcaagggctaagactagagctgccaaggtgatcttaatttctataacttgcagtaaaagttacttggctttgacatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

197

Amino Acids

22.43

Weight (kDa)

9.48

Isoelectric Point (pI)

41.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 460
AclWI GGATC 1 cut(s) 192
AcsI RAATTY 1 cut(s) 362
AgsI TTSAA 5 cut(s) 28, 227, 282, 482, 491
AluBI AGCT 8 cut(s) 271, 298, 334, 344, 355, 424, 465, 536
AluI AGCT 8 cut(s) 271, 298, 334, 344, 355, 424, 465, 536
Alw21I GWGCWC 1 cut(s) 467
Alw26I GTCTC 1 cut(s) 475
AlwI GGATC 1 cut(s) 192
AlwNI CAGNNNCTG 1 cut(s) 500
AoxI GGCC 1 cut(s) 205
ApeKI GCWGC 4 cut(s) 344, 355, 449, 536
ApoI RAATTY 1 cut(s) 362
ArsI GACNNNNNNTTYG 2 cut(s) 134, 166
AsuHPI GGTGA 2 cut(s) 157, 556
BaeI ACNNNNGTAYC 2 cut(s) 204, 237
BanII GRGCYC 1 cut(s) 467
BauI CACGAG 1 cut(s) 327
Bbv12I GWGCWC 1 cut(s) 467
BbvI GCAGC 4 cut(s) 331, 342, 436, 523
BccI CCATC 2 cut(s) 197, 507
BcoDI GTCTC 1 cut(s) 475
BfaI CTAG 4 cut(s) 209, 299, 384, 531
BfmI CTRYAG 3 cut(s) 317, 356, 501
BisI GCNGC 4 cut(s) 345, 356, 450, 537
BlsI GCNGC 4 cut(s) 346, 357, 451, 538
BpuEI CTTGAG 1 cut(s) 166
BsaJI CCNNGG 1 cut(s) 540
BsaXI ACNNNNNCTCC 2 cut(s) 413, 443
BseDI CCNNGG 1 cut(s) 540
BseMII CTCAG 1 cut(s) 54
BseRI GAGGAG 1 cut(s) 434
BseXI GCAGC 4 cut(s) 331, 342, 436, 523
BsgI GTGCAG 1 cut(s) 435
BshFI GGCC 1 cut(s) 207
BsiHKAI GWGCWC 1 cut(s) 467
BsmAI GTCTC 1 cut(s) 475
BsnI GGCC 1 cut(s) 207
Bsp1286I GDGCHC 1 cut(s) 467
Bsp143I GATC 2 cut(s) 197, 546
BspACI CCGC 1 cut(s) 460
BspANI GGCC 1 cut(s) 207
BspCNI CTCAG 1 cut(s) 55
BspMAI CTGCAG 2 cut(s) 360, 505
BspPI GGATC 1 cut(s) 192
BssECI CCNNGG 1 cut(s) 540
BssMI GATC 2 cut(s) 197, 546
BssSI CACGAG 1 cut(s) 327
BssT1I CCWWGG 1 cut(s) 540
Bst2BI CACGAG 1 cut(s) 327
Bst4CI ACNGT 1 cut(s) 160
BstAPI GCANNNNNTGC 1 cut(s) 404
BstDEI CTNAG 3 cut(s) 63, 455, 525
BstKTI GATC 2 cut(s) 200, 549
BstMAI GTCTC 1 cut(s) 475
BstMBI GATC 2 cut(s) 197, 546
BstMWI GCNNNNNNNGC 3 cut(s) 268, 295, 404
BstNSI RCATGY 1 cut(s) 74
BstSFI CTRYAG 3 cut(s) 317, 356, 501
BstV1I GCAGC 4 cut(s) 331, 342, 436, 523
BstX2I RGATCY 1 cut(s) 197
BstYI RGATCY 1 cut(s) 197
BsuRI GGCC 1 cut(s) 207
CaiI CAGNNNCTG 1 cut(s) 500
CviAII CATG 2 cut(s) 71, 591
DdeI CTNAG 3 cut(s) 63, 455, 525
DpnI GATC 2 cut(s) 199, 548
DpnII GATC 2 cut(s) 197, 546
EciI GGCGGA 1 cut(s) 475
Ecl136II GAGCTC 1 cut(s) 465
Eco130I CCWWGG 1 cut(s) 540
Eco24I GRGCYC 1 cut(s) 467
Eco53kI GAGCTC 1 cut(s) 465
EcoICRI GAGCTC 1 cut(s) 465
EcoT14I CCWWGG 1 cut(s) 540
EcoT22I ATGCAT 1 cut(s) 76
EcoT38I GRGCYC 1 cut(s) 467
ErhI CCWWGG 1 cut(s) 540
FaeI CATG 2 cut(s) 74, 594
FaiI YATR 7 cut(s) 44, 57, 72, 238, 427, 560, 592
FalI AAGNNNNNCTT 2 cut(s) 533, 565
FatI CATG 2 cut(s) 70, 590
Fnu4HI GCNGC 4 cut(s) 345, 356, 450, 537
FriOI GRGCYC 1 cut(s) 467
Fsp4HI GCNGC 4 cut(s) 345, 356, 450, 537
FspBI CTAG 4 cut(s) 209, 299, 384, 531
GluI GCNGC 4 cut(s) 345, 356, 450, 537
HaeIII GGCC 1 cut(s) 207
Hin1II CATG 2 cut(s) 74, 594
HinfI GANTC 4 cut(s) 15, 179, 482, 491
HphI GGTGA 2 cut(s) 157, 556
Hpy188I TCNGA 3 cut(s) 64, 202, 496
Hpy188III TCNNGA 2 cut(s) 153, 510
HpyAV CCTTC 3 cut(s) 136, 296, 427
HpyCH4III ACNGT 1 cut(s) 160
HpyCH4V TGCA 7 cut(s) 74, 347, 358, 398, 452, 503, 567
HpyF10VI GCNNNNNNNGC 3 cut(s) 268, 295, 404
HpyF3I CTNAG 3 cut(s) 63, 455, 525
Hsp92II CATG 2 cut(s) 74, 594
Kzo9I GATC 2 cut(s) 197, 546
LmnI GCTCC 2 cut(s) 421, 462
LpnPI CCDG 2 cut(s) 243, 523
Lsp1109I GCAGC 4 cut(s) 331, 342, 436, 523
MaeI CTAG 4 cut(s) 209, 299, 384, 531
MaeIII GTNAC 2 cut(s) 374, 575
MalI GATC 2 cut(s) 199, 548
MboI GATC 2 cut(s) 197, 546
MflI RGATCY 1 cut(s) 197
MhlI GDGCHC 1 cut(s) 467
MluCI AATT 2 cut(s) 362, 552
MlyI GAGTC 1 cut(s) 173
MnlI CCTC 2 cut(s) 58, 412
Mph1103I ATGCAT 1 cut(s) 76
MseI TTAA 1 cut(s) 551
MwoI GCNNNNNNNGC 3 cut(s) 268, 295, 404
NdeII GATC 2 cut(s) 197, 546
NlaIII CATG 2 cut(s) 74, 594
NsiI ATGCAT 1 cut(s) 76
NspI RCATGY 1 cut(s) 74
PfeI GAWTC 3 cut(s) 15, 482, 491
PkrI GCNGC 4 cut(s) 346, 357, 451, 538
PleI GAGTC 1 cut(s) 173
PpsI GAGTC 1 cut(s) 173
Psp124BI GAGCTC 1 cut(s) 467
PstI CTGCAG 2 cut(s) 360, 505
PstNI CAGNNNCTG 1 cut(s) 500
PsuI RGATCY 1 cut(s) 197
SacI GAGCTC 1 cut(s) 467
SaqAI TTAA 1 cut(s) 551
SatI GCNGC 4 cut(s) 345, 356, 450, 537
Sau3AI GATC 2 cut(s) 197, 546
SchI GAGTC 1 cut(s) 173
SduI GDGCHC 1 cut(s) 467
SfcI CTRYAG 3 cut(s) 317, 356, 501
SmlI CTYRAG 1 cut(s) 181
SmoI CTYRAG 1 cut(s) 181
Sse9I AATT 2 cut(s) 362, 552
SsiI CCGC 1 cut(s) 460
SspMI CTAG 4 cut(s) 209, 299, 384, 531
SstI GAGCTC 1 cut(s) 467
StyI CCWWGG 1 cut(s) 540
TaaI ACNGT 1 cut(s) 160
TaqI TCGA 2 cut(s) 273, 417
TasI AATT 2 cut(s) 362, 552
TfiI GAWTC 3 cut(s) 15, 482, 491
Tru1I TTAA 1 cut(s) 551
Tru9I TTAA 1 cut(s) 551
TseI GCWGC 4 cut(s) 344, 355, 449, 536
TspDTI ATGAA 1 cut(s) 354
XapI RAATTY 1 cut(s) 362
XceI RCATGY 1 cut(s) 74
XspI CTAG 4 cut(s) 209, 299, 384, 531
Zsp2I ATGCAT 1 cut(s) 76
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.