Rh2DG455100

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000760
Physical Location & Seq
Reverse (-)
65819640 .. 65822528
2889 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG455100.1

Sequence Viewer

Length: 1458 bp
ATGGCGACAATGACATCTATCAGTTTAGTGTCCAAGAGAACGAAGGTGATGTCAAGAACAGTTAGTTTTGAGAACCCCGACTCAAGCAACACCAACAGATCCGATGGCCTAGATACATTGGTTTTTGAAAAATCTGTATGCTACAAGAAAAGGAAAGCAGGGCAACTAAAGCTCGATACTTCAACTTTGCTACCCAAGCTAGAAGGTTGTGTTTCTCTACAGACCCCACGAGAGCTTGATGAAGCTGCAATCAAGCTGCAGAAATTTTACAAGAGTTACCGAACTAGACGAAACCTTGCAGATTGTGCTGTTGTTGTCGAGGAGCTATGGTGGAAGGCATTAGACTTTGCTGCACTTAGGCGGAGCTCTGTCTCATTCTTTGAATCTGTTGAATCAGAAACTGCAGTTTCCAGATGGGCAAGGGCTAAGACTAGAGCTGCCAAGGTTGGGAAGGGTTTGTCCAAGGATGAGAAGGCTCAGAAATTAGCTTTAAGACATTGGCTTGAGGCTATTGATCCACGGCATCGATATGGACATAATCTGCACTTGTATTATGATGTCTGGTTTAATAGTGCGAGCTCTCAACCTTTCTTCTACTGGTTGGATGTTGGAGATGGTAAAGAAGAAAATCTTGAGAAGTGTCCAAGAGCGGATCTTCAACGCCAATGCATCAAGTACCTTGGACCAAATGAGAGGGAAACATATGAAGTGATAGTGGCTAGTGGGAAGCTTGTATACAGACAAAGTGGCAACCTTGTGACTACTACTGAGGGTTGCAAATGGATCTTTGTTCTCAGTGCATCGAGGATTATGTATGTTGCGGAAAAGAAGAAAGGCCATTTCCAGCACTCCAGTTTTCTATCCGGAGGTGCCACAATTGCAGCGGGGAGATTAGTTGCTTCTGATGGGGTTCTTGAGGCTGTATGGTGCTACAGTGGTCATTATCGCCCGACAGAAGAGCACTTTTTGGAGTTCATTAGCTTCTTAGAGGAGCAACAGGTGGACTTGACAAATGTCAAAAAACATCCTATAGATGATGATATTCCACCTTCAGAATCTACCAGTAAAGATACGAGCACCCTTGAGGATATCCCATCGGCAAACATTGAGACGAGTACTAATGAAAATGAGCGTGCCGTTGACGCTTCCATAGTAAGTGATGACAATCAAGACATTGTGGAAGCACCAAAATTTGACTCGGGATCAGGGGGATTGCCTTGCAAATGGACTACAGGAGCTGGTCCTCGAATCGGATGTGTGAGAGACTACCCCACACGGCTGCAATTTCAGGCACTTGAGCAAGTCAATCTGTCACCGAGAATCAAACCAGAACGCACTGCAAGCAATAACACCCCAGTGCCTTCACCAAGACCTAGTCCCAAGTTCCACTTATCACCTAGACTTGCATATATGGGACTTCCTAGCCCCAGAAGATTGCATAATTTGACTCCTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

485

Amino Acids

54.55

Weight (kDa)

8.67

Isoelectric Point (pI)

43.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 869
AccBSI CCGCTC 1 cut(s) 650
AccI GTMKAC 1 cut(s) 735
AccIII TCCGGA 1 cut(s) 863
AciI CCGC 4 cut(s) 361, 650, 821, 884
AclWI GGATC 5 cut(s) 93, 509, 660, 791, 1210
AcsI RAATTY 2 cut(s) 263, 1190
AcuI CTGAAG 1 cut(s) 1035
AfaI GTAC 2 cut(s) 677, 1117
AfiI CCNNNNNNNGG 2 cut(s) 447, 1250
AgsI TTSAA 5 cut(s) 128, 183, 383, 392, 659
AleI CACNNNNGTG 1 cut(s) 1355
Alw21I GWGCWC 4 cut(s) 368, 581, 963, 1079
Alw26I GTCTC 3 cut(s) 376, 1103, 1257
AlwI GGATC 5 cut(s) 93, 509, 660, 791, 1210
AlwNI CAGNNNCTG 2 cut(s) 401, 1238
Ama87I CYCGRG 1 cut(s) 1198
Aor13HI TCCGGA 1 cut(s) 863
AoxI GGCC 2 cut(s) 106, 835
ApeKI GCWGC 6 cut(s) 245, 256, 350, 437, 881, 1279
ApoI RAATTY 2 cut(s) 263, 1190
ArsI GACNNNNNNTTYG 2 cut(s) 35, 67
AspS9I GGNCC 2 cut(s) 683, 1241
AsuHPI GGTGA 4 cut(s) 58, 1305, 1356, 1386
AvaI CYCGRG 1 cut(s) 1198
AvaII GGWCC 2 cut(s) 683, 1241
BaeI ACNNNNGTAYC 2 cut(s) 105, 138
BanI GGYRCC 1 cut(s) 869
BanII GRGCYC 2 cut(s) 368, 581
BarI GAAGNNNNNNTAC 2 cut(s) 719, 751
BauI CACGAG 1 cut(s) 228
Bbv12I GWGCWC 4 cut(s) 368, 581, 963, 1079
BbvI GCAGC 6 cut(s) 232, 243, 337, 424, 893, 1266
BccI CCATC 5 cut(s) 98, 408, 608, 899, 1102
BceAI ACGGC 3 cut(s) 536, 1121, 1292
BcoDI GTCTC 3 cut(s) 376, 1103, 1257
BfaI CTAG 8 cut(s) 110, 200, 285, 432, 720, 1374, 1398, 1422
BfmI CTRYAG 6 cut(s) 218, 257, 402, 931, 1029, 1230
BisI GCNGC 6 cut(s) 246, 257, 351, 438, 882, 1280
BlsI GCNGC 6 cut(s) 247, 258, 352, 439, 883, 1281
BmcAI AGTACT 1 cut(s) 1117
Bme18I GGWCC 2 cut(s) 683, 1241
BmeT110I CYCGRG 1 cut(s) 1198
BmgT120I GGNCC 2 cut(s) 683, 1241
BmiI GGNNCC 1 cut(s) 871
BmrI ACTGGG 1 cut(s) 1349
BmsI GCATC 3 cut(s) 532, 678, 809
BmuI ACTGGG 1 cut(s) 1349
BoxI GACNNNNGTC 1 cut(s) 1013
BpmI CTGGAG 1 cut(s) 835
BpuEI CTTGAG 6 cut(s) 67, 524, 653, 935, 1103, 1316
Bsa29I ATCGAT 1 cut(s) 526
BsaBI GATNNNNATC 1 cut(s) 1164
BsaJI CCNNGG 4 cut(s) 441, 462, 518, 679
BsaWI WCCGGW 1 cut(s) 863
BsaXI ACNNNNNCTCC 2 cut(s) 314, 344
Bsc4I CCNNNNNNNGG 2 cut(s) 447, 1250
Bse1I ACTGG 4 cut(s) 602, 852, 1062, 1355
Bse8I GATNNNNATC 1 cut(s) 1164
BseAI TCCGGA 1 cut(s) 863
BseCI ATCGAT 1 cut(s) 526
BseDI CCNNGG 4 cut(s) 441, 462, 518, 679
BseGI GGATG 4 cut(s) 472, 610, 1024, 1259
BseJI GATNNNNATC 1 cut(s) 1164
BseLI CCNNNNNNNGG 2 cut(s) 447, 1250
BseMII CTCAG 3 cut(s) 491, 759, 808
BseNI ACTGG 4 cut(s) 602, 852, 1062, 1355
BseRI GAGGAG 3 cut(s) 335, 1004, 1440
BseXI GCAGC 6 cut(s) 232, 243, 337, 424, 893, 1266
BsgI GTGCAG 2 cut(s) 336, 527
BshFI GGCC 2 cut(s) 108, 837
BshNI GGYRCC 1 cut(s) 869
BshVI ATCGAT 1 cut(s) 526
BsiHKAI GWGCWC 4 cut(s) 368, 581, 963, 1079
BsiHKCI CYCGRG 1 cut(s) 1198
BsiSI CCGG 1 cut(s) 864
BslFI GGGAC 2 cut(s) 1362, 1428
BslI CCNNNNNNNGG 2 cut(s) 447, 1250
BsmAI GTCTC 3 cut(s) 376, 1103, 1257
BsmBI CGTCTC 1 cut(s) 1103
BsmFI GGGAC 2 cut(s) 1362, 1428
BsnI GGCC 2 cut(s) 108, 837
BsoBI CYCGRG 1 cut(s) 1198
Bsp1286I GDGCHC 4 cut(s) 368, 581, 963, 1079
Bsp13I TCCGGA 1 cut(s) 863
Bsp143I GATC 5 cut(s) 98, 514, 652, 783, 1202
BspACI CCGC 4 cut(s) 361, 650, 821, 884
BspANI GGCC 2 cut(s) 108, 837
BspCNI CTCAG 3 cut(s) 490, 760, 807
BspDI ATCGAT 1 cut(s) 526
BspEI TCCGGA 1 cut(s) 863
BspLI GGNNCC 1 cut(s) 871
BspMAI CTGCAG 2 cut(s) 261, 406
BspPI GGATC 5 cut(s) 93, 509, 660, 791, 1210
BspQI GCTCTTC 1 cut(s) 951
BspT107I GGYRCC 1 cut(s) 869
BsrBI CCGCTC 1 cut(s) 650
BsrI ACTGG 4 cut(s) 602, 852, 1062, 1355
BssECI CCNNGG 4 cut(s) 441, 462, 518, 679
BssMI GATC 5 cut(s) 98, 514, 652, 783, 1202
BssNAI GTATAC 1 cut(s) 736
BssSI CACGAG 1 cut(s) 228
BssT1I CCWWGG 3 cut(s) 441, 462, 679
Bst1107I GTATAC 1 cut(s) 736
Bst2BI CACGAG 1 cut(s) 228
Bst4CI ACNGT 2 cut(s) 61, 935
Bst6I CTCTTC 1 cut(s) 951
BstAPI GCANNNNNTGC 1 cut(s) 305
BstC8I GCNNGC 3 cut(s) 577, 1134, 1342
BstDEI CTNAG 7 cut(s) 356, 426, 477, 768, 794, 985, 1455
BstDSI CCRYGG 1 cut(s) 518
BstF5I GGATG 4 cut(s) 472, 610, 1024, 1259
BstKTI GATC 5 cut(s) 101, 517, 655, 786, 1205
BstMAI GTCTC 3 cut(s) 376, 1103, 1257
BstMBI GATC 5 cut(s) 98, 514, 652, 783, 1202
BstMWI GCNNNNNNNGC 6 cut(s) 169, 196, 305, 878, 1142, 1341
BstPAI GACNNNNGTC 1 cut(s) 1013
BstSFI CTRYAG 6 cut(s) 218, 257, 402, 931, 1029, 1230
BstV1I GCAGC 6 cut(s) 232, 243, 337, 424, 893, 1266
BstX2I RGATCY 3 cut(s) 98, 652, 783
BstYI RGATCY 3 cut(s) 98, 652, 783
BstZ17I GTATAC 1 cut(s) 736
Bsu15I ATCGAT 1 cut(s) 526
BsuRI GGCC 2 cut(s) 108, 837
BsuTUI ATCGAT 1 cut(s) 526
BtgI CCRYGG 1 cut(s) 518
BtsCI GGATG 4 cut(s) 472, 610, 1024, 1259
BtsI GCAGTG 1 cut(s) 1335
BtsIMutI CAGTG 4 cut(s) 802, 940, 1335, 1362
Cac8I GCNNGC 3 cut(s) 577, 1134, 1342
CaiI CAGNNNCTG 2 cut(s) 401, 1238
Cfr13I GGNCC 2 cut(s) 683, 1241
ClaI ATCGAT 1 cut(s) 526
CseI GACGC 1 cut(s) 1151
Csp6I GTAC 2 cut(s) 676, 1116
CviQI GTAC 2 cut(s) 676, 1116
DdeI CTNAG 7 cut(s) 356, 426, 477, 768, 794, 985, 1455
DpnI GATC 5 cut(s) 100, 516, 654, 785, 1204
DpnII GATC 5 cut(s) 98, 514, 652, 783, 1202
Eam1104I CTCTTC 1 cut(s) 951
EarI CTCTTC 1 cut(s) 951
EciI GGCGGA 1 cut(s) 376
Ecl136II GAGCTC 2 cut(s) 366, 579
Eco130I CCWWGG 3 cut(s) 441, 462, 679
Eco24I GRGCYC 2 cut(s) 368, 581
Eco32I GATATC 1 cut(s) 1090
Eco47I GGWCC 2 cut(s) 683, 1241
Eco53kI GAGCTC 2 cut(s) 366, 579
Eco57I CTGAAG 1 cut(s) 1035
Eco88I CYCGRG 1 cut(s) 1198
EcoICRI GAGCTC 2 cut(s) 366, 579
EcoRV GATATC 1 cut(s) 1090
EcoT14I CCWWGG 3 cut(s) 441, 462, 679
EcoT22I ATGCAT 1 cut(s) 671
EcoT38I GRGCYC 2 cut(s) 368, 581
ErhI CCWWGG 3 cut(s) 441, 462, 679
Esp3I CGTCTC 1 cut(s) 1103
FalI AAGNNNNNCTT 4 cut(s) 615, 647, 1373, 1405
FaqI GGGAC 2 cut(s) 1362, 1428
FauI CCCGC 1 cut(s) 877
FauNDI CATATG 1 cut(s) 703
FblI GTMKAC 1 cut(s) 735
Fnu4HI GCNGC 6 cut(s) 246, 257, 351, 438, 882, 1280
FokI GGATG 4 cut(s) 479, 617, 1011, 1266
FriOI GRGCYC 2 cut(s) 368, 581
Fsp4HI GCNGC 6 cut(s) 246, 257, 351, 438, 882, 1280
FspBI CTAG 8 cut(s) 110, 200, 285, 432, 720, 1374, 1398, 1422
GluI GCNGC 6 cut(s) 246, 257, 351, 438, 882, 1280
GsuI CTGGAG 1 cut(s) 835
HaeIII GGCC 2 cut(s) 108, 837
HapII CCGG 1 cut(s) 864
HgaI GACGC 1 cut(s) 1151
HincII GTYRAC 1 cut(s) 1141
HindII GTYRAC 1 cut(s) 1141
HindIII AAGCTT 1 cut(s) 728
HinfI GANTC 8 cut(s) 80, 383, 392, 1055, 1196, 1248, 1320, 1447
HpaII CCGG 1 cut(s) 864
HphI GGTGA 4 cut(s) 58, 1305, 1356, 1386
Hpy166II GTNNAC 3 cut(s) 736, 1003, 1141
Hpy188I TCNGA 6 cut(s) 103, 397, 480, 904, 1054, 1253
Hpy188III TCNNGA 7 cut(s) 54, 411, 632, 864, 914, 1169, 1200
Hpy8I GTNNAC 3 cut(s) 736, 1003, 1141
HpyAV CCTTC 7 cut(s) 37, 197, 328, 445, 466, 1059, 1371
HpyCH4III ACNGT 2 cut(s) 61, 935
HpyF10VI GCNNNNNNNGC 6 cut(s) 169, 196, 305, 878, 1142, 1341
HpyF3I CTNAG 7 cut(s) 356, 426, 477, 768, 794, 985, 1455
Kpn2I TCCGGA 1 cut(s) 863
Kzo9I GATC 5 cut(s) 98, 514, 652, 783, 1202
LguI GCTCTTC 1 cut(s) 951
LmnI GCTCC 4 cut(s) 322, 363, 991, 1235
Lsp1109I GCAGC 6 cut(s) 232, 243, 337, 424, 893, 1266
LweI GCATC 3 cut(s) 532, 678, 809
MaeI CTAG 8 cut(s) 110, 200, 285, 432, 720, 1374, 1398, 1422
MaeIII GTNAC 3 cut(s) 275, 757, 1311
MalI GATC 5 cut(s) 100, 516, 654, 785, 1204
MbiI CCGCTC 1 cut(s) 650
MboI GATC 5 cut(s) 98, 514, 652, 783, 1202
MboII GAAGA 6 cut(s) 583, 635, 647, 841, 968, 1443
MfeI CAATTG 1 cut(s) 876
MflI RGATCY 3 cut(s) 98, 652, 783
MhlI GDGCHC 4 cut(s) 368, 581, 963, 1079
MluCI AATT 6 cut(s) 263, 482, 876, 1190, 1283, 1441
MlyI GAGTC 3 cut(s) 74, 1190, 1441
MmeI TCCRAC 2 cut(s) 582, 589
Mph1103I ATGCAT 1 cut(s) 671
MroI TCCGGA 1 cut(s) 863
MseI TTAA 2 cut(s) 491, 567
MslI CAYNNNNRTG 2 cut(s) 528, 1355
MspA1I CMGCKG 1 cut(s) 884
MspI CCGG 1 cut(s) 864
MunI CAATTG 1 cut(s) 876
MwoI GCNNNNNNNGC 6 cut(s) 169, 196, 305, 878, 1142, 1341
NdeI CATATG 1 cut(s) 703
NdeII GATC 5 cut(s) 98, 514, 652, 783, 1202
NlaIV GGNNCC 1 cut(s) 871
NmuCI GTSAC 2 cut(s) 757, 1311
NsiI ATGCAT 1 cut(s) 671
OliI CACNNNNGTG 1 cut(s) 1355
PciSI GCTCTTC 1 cut(s) 951
PfeI GAWTC 5 cut(s) 383, 392, 1055, 1248, 1320
PflFI GACNNNGTC 1 cut(s) 1374
PkrI GCNGC 6 cut(s) 247, 258, 352, 439, 883, 1281
PleI GAGTC 3 cut(s) 74, 1190, 1441
PpsI GAGTC 3 cut(s) 74, 1190, 1441
PshAI GACNNNNGTC 1 cut(s) 1013
Psp124BI GAGCTC 2 cut(s) 368, 581
PspN4I GGNNCC 1 cut(s) 871
PspPI GGNCC 2 cut(s) 683, 1241
PstI CTGCAG 2 cut(s) 261, 406
PstNI CAGNNNCTG 2 cut(s) 401, 1238
PsuI RGATCY 3 cut(s) 98, 652, 783
PsyI GACNNNGTC 1 cut(s) 1374
RsaI GTAC 2 cut(s) 677, 1117
RsaNI GTAC 2 cut(s) 676, 1116
RseI CAYNNNNRTG 2 cut(s) 528, 1355
SacI GAGCTC 2 cut(s) 368, 581
SapI GCTCTTC 1 cut(s) 951
SaqAI TTAA 2 cut(s) 491, 567
SatI GCNGC 6 cut(s) 246, 257, 351, 438, 882, 1280
Sau3AI GATC 5 cut(s) 98, 514, 652, 783, 1202
Sau96I GGNCC 2 cut(s) 683, 1241
ScaI AGTACT 1 cut(s) 1117
SchI GAGTC 3 cut(s) 74, 1190, 1441
SduI GDGCHC 4 cut(s) 368, 581, 963, 1079
SfaNI GCATC 3 cut(s) 532, 678, 809
SfcI CTRYAG 6 cut(s) 218, 257, 402, 931, 1029, 1230
SinI GGWCC 2 cut(s) 683, 1241
SmiMI CAYNNNNRTG 2 cut(s) 528, 1355
SmlI CTYRAG 6 cut(s) 82, 503, 632, 914, 1082, 1295
SmoI CTYRAG 6 cut(s) 82, 503, 632, 914, 1082, 1295
Sse9I AATT 6 cut(s) 263, 482, 876, 1190, 1283, 1441
SsiI CCGC 4 cut(s) 361, 650, 821, 884
SspMI CTAG 8 cut(s) 110, 200, 285, 432, 720, 1374, 1398, 1422
SstI GAGCTC 2 cut(s) 368, 581
StyI CCWWGG 3 cut(s) 441, 462, 679
TaaI ACNGT 2 cut(s) 61, 935
TaqI TCGA 5 cut(s) 174, 318, 526, 803, 1246
TasI AATT 6 cut(s) 263, 482, 876, 1190, 1283, 1441
TatI WGTACW 1 cut(s) 1115
TfiI GAWTC 5 cut(s) 383, 392, 1055, 1248, 1320
Tru1I TTAA 2 cut(s) 491, 567
Tru9I TTAA 2 cut(s) 491, 567
TscAI CASTG 4 cut(s) 802, 940, 1342, 1362
TseFI GTSAC 2 cut(s) 757, 1311
TseI GCWGC 6 cut(s) 245, 256, 350, 437, 881, 1279
Tsp45I GTSAC 2 cut(s) 757, 1311
TspDTI ATGAA 4 cut(s) 255, 720, 964, 1137
TspRI CASTG 4 cut(s) 802, 940, 1342, 1362
Tth111I GACNNNGTC 1 cut(s) 1374
VpaK11BI GGWCC 2 cut(s) 683, 1241
XapI RAATTY 2 cut(s) 263, 1190
XmiI GTMKAC 1 cut(s) 735
XspI CTAG 8 cut(s) 110, 200, 285, 432, 720, 1374, 1398, 1422
ZrmI AGTACT 1 cut(s) 1117
Zsp2I ATGCAT 1 cut(s) 671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.