RLG00000016430

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000760
Physical Location & Seq
Forward (+)
6587400 .. 6590698
3299 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016430

Sequence Viewer

Length: 1098 bp
ATGTCTTTCTCCAATGTTGAGTCTAACCAGTTGGATGATGGCCTTAACAATGCTCTGTCTGAACCAGCAATCTTGTTTTTGCCTAGACTGGTTAGAGAGCTTGATGCTGCAGCAGTCAAAATTCAAAAGGTTTACAAGAGTTATCGAACTCGAAGAAACCTTGCAGATTGTGCAGTGGTGGCTGAGGAGCTATGGTGGAAAACTTTAGATTCTGCAGCTCTCAAGCAGAGTTCTGTGTCATTCTTCAATGTTGAGAAGCCAGAAACCGCCGTTTCGAGGTGGGCAAGGGCTAGGACTAGAGGTCTAGAGCTGCTAAGGTTTGATGAGAAAGCACAAATGTTAGCGCTTCAACATTGGCTTGAAGCTATTGATCCACACCACCGGTATGGACATAATTTACATTTCTATTATGATTTGTGGTTTGAAAGTGAGAGCAGTCAACCTTTCTTCTACTGGGAAATATGTCTCGAGAAATGCTCGAGGACAGCTCTACAGCGCCAATGCATCGAGTACCTTGGACCGAAAGAAAGGAAATCCCATGAAGTAGTAGTGGAAAATGGCAAGCTAATGTATAAGAAAAGTGGGATGCTTGTGAATAGTAGTGAAGGTTCCAAATCGATATTCGTGCTGAGCACAACAAGGGCTTTGTACGTTGGTCAGAAGAAGAAGGGTCATTTTGACCATTCGAGTTTTCTACCTGGCGGTGCTAGCACAGCTGCTGGAAGATTGGTTGCCCATGATGGGGTTCTTGAGGCCATTTGTCCATACAGTGATCATTACCACCCAACTGAAGAAAACTCCATGGAATTCATCAGCTTCCTCCAAGATAACCATGTCGATCTCACTAATGTCAAGAAAACTGAAGGGAAACTAACAAAGCAAAACTCATTTCAGTCGACGCAATCGGATGGCGCAAACACAACCAATGTCGATGACTTGACCGAGAAGGCACCGATCCCCGCCGTGCGTTCGGAACCAATGTTCACCATGGGCATGCCCTTGCCTTGCAATTGGTCTAGTGGAAATGGAGCCCGAATCGAGTGTGTGCGAGACTACCCTAGTGACCTCCAGACCACAGCACTGGAACAAGTCAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

366

Amino Acids

41.32

Weight (kDa)

6.2

Isoelectric Point (pI)

48.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 949
AccI GTMKAC 1 cut(s) 896
AciI CCGC 3 cut(s) 267, 702, 960
AclWI GGATC 2 cut(s) 365, 949
AcsI RAATTY 2 cut(s) 120, 806
AcuI CTGAAG 2 cut(s) 810, 882
AfaI GTAC 2 cut(s) 512, 650
AfeI AGCGCT 1 cut(s) 345
AfiI CCNNNNNNNGG 3 cut(s) 276, 741, 742
AgeI ACCGGT 1 cut(s) 381
AgsI TTSAA 5 cut(s) 125, 247, 350, 362, 425
AhdI GACNNNNNGTC 1 cut(s) 300
AjnI CCWGG 1 cut(s) 697
AjuI GAANNNNNNNTTGG 2 cut(s) 605, 637
AloI GAACNNNNNNTCC 2 cut(s) 965, 997
Alw21I GWGCWC 1 cut(s) 635
Alw26I GTCTC 2 cut(s) 470, 1044
AlwI GGATC 2 cut(s) 365, 949
AlwNI CAGNNNCTG 1 cut(s) 719
Ama87I CYCGRG 2 cut(s) 467, 478
Aor51HI AGCGCT 1 cut(s) 345
AoxI GGCC 2 cut(s) 40, 753
ApeKI GCWGC 5 cut(s) 107, 110, 215, 310, 716
ApoI RAATTY 2 cut(s) 120, 806
AsiGI ACCGGT 1 cut(s) 381
AspLEI GCGC 3 cut(s) 346, 498, 914
AspS9I GGNCC 1 cut(s) 518
AsuHPI GGTGA 1 cut(s) 976
AsuNHI GCTAGC 1 cut(s) 707
AvaI CYCGRG 2 cut(s) 467, 478
AvaII GGWCC 1 cut(s) 518
BanI GGYRCC 1 cut(s) 949
BanII GRGCYC 1 cut(s) 1033
Bbv12I GWGCWC 1 cut(s) 635
BbvCI CCTCAGC 1 cut(s) 183
BbvI GCAGC 5 cut(s) 94, 122, 227, 297, 703
BccI CCATC 3 cut(s) 32, 734, 902
BceAI ACGGC 2 cut(s) 254, 947
BcgI CGANNNNNNTGC 2 cut(s) 607, 641
BciT130I CCWGG 1 cut(s) 699
BclI TGATCA 1 cut(s) 772
BcoDI GTCTC 2 cut(s) 470, 1044
BfaI CTAG 7 cut(s) 84, 291, 297, 305, 708, 1017, 1059
BfmI CTRYAG 3 cut(s) 108, 213, 491
BfoI RGCGCY 2 cut(s) 347, 499
BisI GCNGC 5 cut(s) 108, 111, 216, 311, 717
BlpI GCTNAGC 1 cut(s) 629
BlsI GCNGC 5 cut(s) 109, 112, 217, 312, 718
Bme1390I CCNGG 1 cut(s) 699
Bme18I GGWCC 1 cut(s) 518
BmeRI GACNNNNNGTC 1 cut(s) 300
BmeT110I CYCGRG 2 cut(s) 467, 478
BmgT120I GGNCC 1 cut(s) 518
BmiI GGNNCC 4 cut(s) 610, 951, 975, 1030
BmrFI CCNGG 1 cut(s) 699
BmrI ACTGGG 1 cut(s) 463
BmsI GCATC 3 cut(s) 94, 513, 576
BmtI GCTAGC 1 cut(s) 711
BmuI ACTGGG 1 cut(s) 463
BplI GAGNNNNNCTC 4 cut(s) 461, 493, 472, 504
BpmI CTGGAG 1 cut(s) 1052
Bpu10I CCTNAGC 2 cut(s) 183, 314
Bpu1102I GCTNAGC 1 cut(s) 629
BpuEI CTTGAG 2 cut(s) 206, 770
Bsa29I ATCGAT 1 cut(s) 617
BsaJI CCNNGG 3 cut(s) 514, 801, 987
BsaWI WCCGGW 1 cut(s) 381
BsaXI ACNNNNNCTCC 2 cut(s) 179, 209
Bsc4I CCNNNNNNNGG 3 cut(s) 276, 741, 742
Bse118I RCCGGY 1 cut(s) 381
Bse1I ACTGG 4 cut(s) 28, 93, 458, 1086
BseBI CCWGG 1 cut(s) 699
BseCI ATCGAT 1 cut(s) 617
BseDI CCNNGG 3 cut(s) 514, 801, 987
BseGI GGATG 3 cut(s) 40, 591, 913
BseLI CCNNNNNNNGG 3 cut(s) 276, 741, 742
BseMII CTCAG 2 cut(s) 174, 620
BseNI ACTGG 4 cut(s) 28, 93, 458, 1086
BseRI GAGGAG 1 cut(s) 200
BseXI GCAGC 5 cut(s) 94, 122, 227, 297, 703
BsgI GTGCAG 1 cut(s) 192
BshFI GGCC 2 cut(s) 42, 755
BshNI GGYRCC 1 cut(s) 949
BshTI ACCGGT 1 cut(s) 381
BshVI ATCGAT 1 cut(s) 617
BsiHKAI GWGCWC 1 cut(s) 635
BsiHKCI CYCGRG 2 cut(s) 467, 478
BsiSI CCGG 1 cut(s) 382
BslI CCNNNNNNNGG 3 cut(s) 276, 741, 742
BsmAI GTCTC 2 cut(s) 470, 1044
BsnI GGCC 2 cut(s) 42, 755
BsoBI CYCGRG 2 cut(s) 467, 478
Bsp1286I GDGCHC 2 cut(s) 635, 1033
Bsp143I GATC 4 cut(s) 370, 772, 838, 954
Bsp1720I GCTNAGC 1 cut(s) 629
Bsp19I CCATGG 2 cut(s) 801, 987
BspACI CCGC 3 cut(s) 267, 702, 960
BspANI GGCC 2 cut(s) 42, 755
BspCNI CTCAG 2 cut(s) 175, 621
BspDI ATCGAT 1 cut(s) 617
BspLI GGNNCC 4 cut(s) 610, 951, 975, 1030
BspMAI CTGCAG 2 cut(s) 112, 217
BspOI GCTAGC 1 cut(s) 711
BspPI GGATC 2 cut(s) 365, 949
BspT107I GGYRCC 1 cut(s) 949
BsrFI RCCGGY 1 cut(s) 381
BsrI ACTGG 4 cut(s) 28, 93, 458, 1086
BssAI RCCGGY 1 cut(s) 381
BssECI CCNNGG 3 cut(s) 514, 801, 987
BssMI GATC 4 cut(s) 370, 772, 838, 954
BssT1I CCWWGG 3 cut(s) 514, 801, 987
Bst2UI CCWGG 1 cut(s) 699
Bst4CI ACNGT 1 cut(s) 770
BstAPI GCANNNNNTGC 1 cut(s) 170
BstC8I GCNNGC 3 cut(s) 563, 709, 995
BstDEI CTNAG 3 cut(s) 183, 314, 629
BstDSI CCRYGG 2 cut(s) 801, 987
BstF5I GGATG 3 cut(s) 40, 591, 913
BstH2I RGCGCY 2 cut(s) 347, 499
BstHHI GCGC 3 cut(s) 346, 498, 914
BstKTI GATC 4 cut(s) 373, 775, 841, 957
BstMAI GTCTC 2 cut(s) 470, 1044
BstMBI GATC 4 cut(s) 370, 772, 838, 954
BstMWI GCNNNNNNNGC 4 cut(s) 170, 179, 708, 713
BstNI CCWGG 1 cut(s) 699
BstNSI RCATGY 1 cut(s) 997
BstSCI CCNGG 1 cut(s) 697
BstSFI CTRYAG 3 cut(s) 108, 213, 491
BstV1I GCAGC 5 cut(s) 94, 122, 227, 297, 703
BstXI CCANNNNNNTGG 2 cut(s) 386, 1081
Bsu15I ATCGAT 1 cut(s) 617
BsuRI GGCC 2 cut(s) 42, 755
BsuTUI ATCGAT 1 cut(s) 617
BtgI CCRYGG 2 cut(s) 801, 987
BtsCI GGATG 3 cut(s) 40, 591, 913
BtsI GCAGTG 1 cut(s) 180
BtsIMutI CAGTG 3 cut(s) 180, 775, 1079
Cac8I GCNNGC 3 cut(s) 563, 709, 995
CaiI CAGNNNCTG 1 cut(s) 719
CfoI GCGC 3 cut(s) 346, 498, 914
Cfr10I RCCGGY 1 cut(s) 381
Cfr13I GGNCC 1 cut(s) 518
ClaI ATCGAT 1 cut(s) 617
CseI GACGC 1 cut(s) 907
Csp6I GTAC 2 cut(s) 511, 649
CspAI ACCGGT 1 cut(s) 381
CviAII CATG 6 cut(s) 539, 737, 802, 833, 988, 994
CviQI GTAC 2 cut(s) 511, 649
DdeI CTNAG 3 cut(s) 183, 314, 629
DpnI GATC 4 cut(s) 372, 774, 840, 956
DpnII GATC 4 cut(s) 370, 772, 838, 954
DriI GACNNNNNGTC 1 cut(s) 300
Eam1105I GACNNNNNGTC 1 cut(s) 300
Eco130I CCWWGG 3 cut(s) 514, 801, 987
Eco24I GRGCYC 1 cut(s) 1033
Eco47I GGWCC 1 cut(s) 518
Eco47III AGCGCT 1 cut(s) 345
Eco57I CTGAAG 2 cut(s) 810, 882
Eco88I CYCGRG 2 cut(s) 467, 478
EcoRI GAATTC 1 cut(s) 806
EcoRII CCWGG 1 cut(s) 697
EcoT14I CCWWGG 3 cut(s) 514, 801, 987
EcoT22I ATGCAT 1 cut(s) 506
EcoT38I GRGCYC 1 cut(s) 1033
ErhI CCWWGG 3 cut(s) 514, 801, 987
FaeI CATG 6 cut(s) 542, 740, 805, 836, 991, 997
FatI CATG 6 cut(s) 538, 736, 801, 832, 987, 993
FauI CCCGC 1 cut(s) 967
FbaI TGATCA 1 cut(s) 772
FblI GTMKAC 1 cut(s) 896
Fnu4HI GCNGC 5 cut(s) 108, 111, 216, 311, 717
FokI GGATG 3 cut(s) 47, 598, 920
FriOI GRGCYC 1 cut(s) 1033
Fsp4HI GCNGC 5 cut(s) 108, 111, 216, 311, 717
FspBI CTAG 7 cut(s) 84, 291, 297, 305, 708, 1017, 1059
GlaI GCGC 3 cut(s) 345, 497, 913
GluI GCNGC 5 cut(s) 108, 111, 216, 311, 717
GsuI CTGGAG 1 cut(s) 1052
HaeII RGCGCY 2 cut(s) 347, 499
HaeIII GGCC 2 cut(s) 42, 755
HapII CCGG 1 cut(s) 382
HgaI GACGC 1 cut(s) 907
HhaI GCGC 3 cut(s) 346, 498, 914
Hin1II CATG 6 cut(s) 542, 740, 805, 836, 991, 997
Hin6I GCGC 3 cut(s) 344, 496, 912
HinP1I GCGC 3 cut(s) 344, 496, 912
HincII GTYRAC 2 cut(s) 440, 897
HindII GTYRAC 2 cut(s) 440, 897
HinfI GANTC 3 cut(s) 20, 209, 1035
HpaII CCGG 1 cut(s) 382
HphI GGTGA 1 cut(s) 976
Hpy166II GTNNAC 4 cut(s) 133, 440, 897, 984
Hpy188I TCNGA 4 cut(s) 61, 660, 907, 973
Hpy188III TCNNGA 6 cut(s) 305, 467, 469, 749, 853, 1069
Hpy8I GTNNAC 4 cut(s) 133, 440, 897, 984
Hpy99I CGWCG 1 cut(s) 901
HpyAV CCTTC 4 cut(s) 599, 661, 857, 940
HpyCH4III ACNGT 1 cut(s) 770
HpyCH4IV ACGT 1 cut(s) 651
HpyCH4V TGCA 6 cut(s) 110, 164, 173, 215, 504, 1008
HpyF10VI GCNNNNNNNGC 4 cut(s) 170, 179, 708, 713
HpyF3I CTNAG 3 cut(s) 183, 314, 629
HpySE526I ACGT 1 cut(s) 651
Hsp92II CATG 6 cut(s) 542, 740, 805, 836, 991, 997
HspAI GCGC 3 cut(s) 344, 496, 912
Ksp22I TGATCA 1 cut(s) 772
Kzo9I GATC 4 cut(s) 370, 772, 838, 954
LmnI GCTCC 2 cut(s) 187, 1028
Lsp1109I GCAGC 5 cut(s) 94, 122, 227, 297, 703
LweI GCATC 3 cut(s) 94, 513, 576
MaeI CTAG 7 cut(s) 84, 291, 297, 305, 708, 1017, 1059
MaeII ACGT 1 cut(s) 651
MaeIII GTNAC 1 cut(s) 1061
MalI GATC 4 cut(s) 372, 774, 840, 956
MboI GATC 4 cut(s) 370, 772, 838, 954
MboII GAAGA 7 cut(s) 165, 235, 439, 673, 676, 735, 803
MfeI CAATTG 1 cut(s) 1009
MhlI GDGCHC 2 cut(s) 635, 1033
MluCI AATT 4 cut(s) 120, 394, 806, 1009
MlyI GAGTC 1 cut(s) 29
MmeI TCCRAC 1 cut(s) 12
MnlI CCTC 7 cut(s) 178, 270, 293, 474, 745, 830, 1076
Mph1103I ATGCAT 1 cut(s) 506
MseI TTAA 1 cut(s) 45
MslI CAYNNNNRTG 2 cut(s) 384, 992
MspA1I CMGCKG 1 cut(s) 716
MspI CCGG 1 cut(s) 382
MspR9I CCNGG 1 cut(s) 699
MunI CAATTG 1 cut(s) 1009
MvaI CCWGG 1 cut(s) 699
MwoI GCNNNNNNNGC 4 cut(s) 170, 179, 708, 713
NcoI CCATGG 2 cut(s) 801, 987
NdeII GATC 4 cut(s) 370, 772, 838, 954
NheI GCTAGC 1 cut(s) 707
NlaIII CATG 6 cut(s) 542, 740, 805, 836, 991, 997
NlaIV GGNNCC 4 cut(s) 610, 951, 975, 1030
NmuCI GTSAC 1 cut(s) 1061
NsiI ATGCAT 1 cut(s) 506
NspI RCATGY 1 cut(s) 997
PaeI GCATGC 1 cut(s) 997
PaeR7I CTCGAG 2 cut(s) 467, 478
PfeI GAWTC 2 cut(s) 209, 1035
PinAI ACCGGT 1 cut(s) 381
PkrI GCNGC 5 cut(s) 109, 112, 217, 312, 718
PleI GAGTC 1 cut(s) 28
PpsI GAGTC 1 cut(s) 28
Psp6I CCWGG 1 cut(s) 697
PspGI CCWGG 1 cut(s) 697
PspN4I GGNNCC 4 cut(s) 610, 951, 975, 1030
PspPI GGNCC 1 cut(s) 518
PspXI VCTCGAGB 1 cut(s) 478
PsrI GAACNNNNNNTAC 2 cut(s) 592, 624
PstI CTGCAG 2 cut(s) 112, 217
PstNI CAGNNNCTG 1 cut(s) 719
PvuII CAGCTG 1 cut(s) 716
RsaI GTAC 2 cut(s) 512, 650
RsaNI GTAC 2 cut(s) 511, 649
RseI CAYNNNNRTG 2 cut(s) 384, 992
SalI GTCGAC 1 cut(s) 895
SaqAI TTAA 1 cut(s) 45
SatI GCNGC 5 cut(s) 108, 111, 216, 311, 717
Sau3AI GATC 4 cut(s) 370, 772, 838, 954
Sau96I GGNCC 1 cut(s) 518
SchI GAGTC 1 cut(s) 29
ScrFI CCNGG 1 cut(s) 699
SduI GDGCHC 2 cut(s) 635, 1033
SfaNI GCATC 3 cut(s) 94, 513, 576
SfcI CTRYAG 3 cut(s) 108, 213, 491
Sfr274I CTCGAG 2 cut(s) 467, 478
SinI GGWCC 1 cut(s) 518
SlaI CTCGAG 2 cut(s) 467, 478
SmiMI CAYNNNNRTG 2 cut(s) 384, 992
SmlI CTYRAG 4 cut(s) 221, 467, 478, 749
SmoI CTYRAG 4 cut(s) 221, 467, 478, 749
SphI GCATGC 1 cut(s) 997
Sse9I AATT 4 cut(s) 120, 394, 806, 1009
SsiI CCGC 3 cut(s) 267, 702, 960
SspMI CTAG 7 cut(s) 84, 291, 297, 305, 708, 1017, 1059
StyD4I CCNGG 1 cut(s) 697
StyI CCWWGG 3 cut(s) 514, 801, 987
TaaI ACNGT 1 cut(s) 770
TaiI ACGT 1 cut(s) 654
TaqII GACCGA 2 cut(s) 535, 956
TasI AATT 4 cut(s) 120, 394, 806, 1009
TfiI GAWTC 2 cut(s) 209, 1035
Tru1I TTAA 1 cut(s) 45
Tru9I TTAA 1 cut(s) 45
TscAI CASTG 3 cut(s) 180, 775, 1086
TseFI GTSAC 1 cut(s) 1061
TseI GCWGC 5 cut(s) 107, 110, 215, 310, 716
Tsp45I GTSAC 1 cut(s) 1061
TspDTI ATGAA 2 cut(s) 555, 799
TspRI CASTG 3 cut(s) 180, 775, 1086
VpaK11BI GGWCC 1 cut(s) 518
XapI RAATTY 2 cut(s) 120, 806
XbaI TCTAGA 1 cut(s) 304
XceI RCATGY 1 cut(s) 997
XcmI CCANNNNNNNNNTGG 1 cut(s) 35
XhoI CTCGAG 2 cut(s) 467, 478
XmiI GTMKAC 1 cut(s) 896
XspI CTAG 7 cut(s) 84, 291, 297, 305, 708, 1017, 1059
Zsp2I ATGCAT 1 cut(s) 506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.