Rh2AG085500

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000760
Physical Location & Seq
Forward (+)
7191052 .. 7192584
1533 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG085500.1

Sequence Viewer

Length: 837 bp
ATGTCTTTCTCCAATGTTGAGTCTAACCAGTTGGATGGTGGCCTTAACAATGCTCTGTCTGAACCAGCAATCTTGTTTTTGCCTAGACTGGTTAGAGAGCTTGATGCTGCAGCAGTCAAAATTCAAAAGGTTTACAAGAGTTATCGAACTCGAAGAAACCTTGCAGATTGTGCAGTGGCGGCTGAGGAGCTATGGTGGAGAGATACGTTAGATTCTCCAGCGGGTGCTAAAGAGCTATGGTGGAAAACTTTAGATTCTGCAGCTCTCAAGCAGAGTTCTGTTCAGAAACCGCCGTTTCGCGGTGGGCAAGGGCTAGCTAGGACTAGAGCTGCTAAGATTGGAAAAGGTTTGTCTAAGGATGAGAAAGCACAAATGTTAGCGCTTCAACATTGGCTTGAAGCTATTGATCCACGCCACCGGTATGGACACAACTTACATTTCTATTATGATTTGTGGTTTGAAAGTGAGAGCAGTCAGCCTTTCTTCTACTGGCTGGATGTTGGAGATGGCAAAGAAATAAATCTCGAGAGATGCTCGAGGACAGCTCTACAGCACCAATGCATCGAGTACCTTGGACCGAAAGAAAGGAAATCCCATGAAGTAGTAGTGGAAAATGGCAAGCTAATGTATAAGCAAAGTGGGATGCTTGTGAATAGTAGTGAAGGTTCCAAATCGATATTCGTGCTAAGCACAACAAGGGCTTTGTATGTTGGTCAGAAGAAGGGTCAGTTTGACCATTTGAGTTTTCTATCTGGAGGTGCTACCACAGCAGCTGGAAGATTGGTTGCCCATGATGGGGTTCTTGAGGAACTAAATTATTCAATGCCCTCGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

278

Amino Acids

31.26

Weight (kDa)

8.81

Isoelectric Point (pI)

45.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 300
AciI CCGC 4 cut(s) 179, 221, 290, 300
AclWI GGATC 1 cut(s) 401
AcsI RAATTY 1 cut(s) 120
AfaI GTAC 1 cut(s) 569
AfeI AGCGCT 1 cut(s) 381
AfiI CCNNNNNNNGG 3 cut(s) 299, 795, 796
AgeI ACCGGT 1 cut(s) 417
AgsI TTSAA 5 cut(s) 125, 386, 398, 461, 822
AjuI GAANNNNNNNTTGG 2 cut(s) 662, 694
AlwI GGATC 1 cut(s) 401
AlwNI CAGNNNCTG 1 cut(s) 773
Ama87I CYCGRG 2 cut(s) 524, 535
Aor51HI AGCGCT 1 cut(s) 381
AoxI GGCC 1 cut(s) 40
ApeKI GCWGC 5 cut(s) 107, 110, 260, 329, 770
ApoI RAATTY 1 cut(s) 120
AsiGI ACCGGT 1 cut(s) 417
AspLEI GCGC 1 cut(s) 382
AspS9I GGNCC 1 cut(s) 575
AsuNHI GCTAGC 1 cut(s) 313
AvaI CYCGRG 2 cut(s) 524, 535
AvaII GGWCC 1 cut(s) 575
BbvCI CCTCAGC 1 cut(s) 183
BbvI GCAGC 5 cut(s) 94, 122, 272, 316, 782
BccI CCATC 3 cut(s) 29, 500, 788
BceAI ACGGC 1 cut(s) 277
BcgI CGANNNNNNTGC 2 cut(s) 664, 698
BfaI CTAG 4 cut(s) 84, 314, 318, 324
BfmI CTRYAG 3 cut(s) 108, 258, 548
BfoI RGCGCY 1 cut(s) 383
BisI GCNGC 6 cut(s) 108, 111, 180, 261, 330, 771
BlpI GCTNAGC 1 cut(s) 686
BlsI GCNGC 6 cut(s) 109, 112, 181, 262, 331, 772
Bme18I GGWCC 1 cut(s) 575
BmeT110I CYCGRG 2 cut(s) 524, 535
BmgT120I GGNCC 1 cut(s) 575
BmiI GGNNCC 1 cut(s) 667
BmsI GCATC 4 cut(s) 94, 521, 570, 633
BmtI GCTAGC 1 cut(s) 317
BplI GAGNNNNNCTC 4 cut(s) 518, 550, 529, 561
BpmI CTGGAG 2 cut(s) 201, 774
Bpu10I CCTNAGC 1 cut(s) 183
Bpu1102I GCTNAGC 1 cut(s) 686
BpuEI CTTGAG 2 cut(s) 251, 824
Bsa29I ATCGAT 1 cut(s) 674
BsaJI CCNNGG 1 cut(s) 571
BsaWI WCCGGW 1 cut(s) 417
BsaXI ACNNNNNCTCC 2 cut(s) 179, 209
Bsc4I CCNNNNNNNGG 3 cut(s) 299, 795, 796
Bse118I RCCGGY 1 cut(s) 417
Bse1I ACTGG 3 cut(s) 28, 93, 494
BseCI ATCGAT 1 cut(s) 674
BseDI CCNNGG 1 cut(s) 571
BseGI GGATG 4 cut(s) 40, 364, 502, 648
BseLI CCNNNNNNNGG 3 cut(s) 299, 795, 796
BseMII CTCAG 1 cut(s) 174
BseNI ACTGG 3 cut(s) 28, 93, 494
BseRI GAGGAG 1 cut(s) 200
BseXI GCAGC 5 cut(s) 94, 122, 272, 316, 782
BsgI GTGCAG 1 cut(s) 192
Bsh1236I CGCG 1 cut(s) 300
BshFI GGCC 1 cut(s) 42
BshTI ACCGGT 1 cut(s) 417
BshVI ATCGAT 1 cut(s) 674
BsiHKCI CYCGRG 2 cut(s) 524, 535
BsiSI CCGG 1 cut(s) 418
BslI CCNNNNNNNGG 3 cut(s) 299, 795, 796
BsnI GGCC 1 cut(s) 42
BsoBI CYCGRG 2 cut(s) 524, 535
Bsp143I GATC 1 cut(s) 406
Bsp1720I GCTNAGC 1 cut(s) 686
BspACI CCGC 4 cut(s) 179, 221, 290, 300
BspANI GGCC 1 cut(s) 42
BspCNI CTCAG 1 cut(s) 175
BspDI ATCGAT 1 cut(s) 674
BspFNI CGCG 1 cut(s) 300
BspLI GGNNCC 1 cut(s) 667
BspMAI CTGCAG 2 cut(s) 112, 262
BspOI GCTAGC 1 cut(s) 317
BspPI GGATC 1 cut(s) 401
BsrFI RCCGGY 1 cut(s) 417
BsrI ACTGG 3 cut(s) 28, 93, 494
BssAI RCCGGY 1 cut(s) 417
BssECI CCNNGG 1 cut(s) 571
BssMI GATC 1 cut(s) 406
BssT1I CCWWGG 1 cut(s) 571
BstAPI GCANNNNNTGC 1 cut(s) 170
BstC8I GCNNGC 2 cut(s) 315, 620
BstDEI CTNAG 4 cut(s) 183, 333, 354, 686
BstF5I GGATG 4 cut(s) 40, 364, 502, 648
BstFNI CGCG 1 cut(s) 300
BstH2I RGCGCY 1 cut(s) 383
BstHHI GCGC 1 cut(s) 382
BstKTI GATC 1 cut(s) 409
BstMBI GATC 1 cut(s) 406
BstMWI GCNNNNNNNGC 3 cut(s) 170, 179, 767
BstSFI CTRYAG 3 cut(s) 108, 258, 548
BstUI CGCG 1 cut(s) 300
BstV1I GCAGC 5 cut(s) 94, 122, 272, 316, 782
BstXI CCANNNNNNTGG 2 cut(s) 35, 422
Bsu15I ATCGAT 1 cut(s) 674
BsuRI GGCC 1 cut(s) 42
BsuTUI ATCGAT 1 cut(s) 674
BtsCI GGATG 4 cut(s) 40, 364, 502, 648
BtsI GCAGTG 1 cut(s) 180
BtsIMutI CAGTG 1 cut(s) 180
Cac8I GCNNGC 2 cut(s) 315, 620
CaiI CAGNNNCTG 1 cut(s) 773
CfoI GCGC 1 cut(s) 382
Cfr10I RCCGGY 1 cut(s) 417
Cfr13I GGNCC 1 cut(s) 575
ClaI ATCGAT 1 cut(s) 674
Csp6I GTAC 1 cut(s) 568
CspAI ACCGGT 1 cut(s) 417
CviAII CATG 2 cut(s) 596, 791
CviQI GTAC 1 cut(s) 568
DdeI CTNAG 4 cut(s) 183, 333, 354, 686
DpnI GATC 1 cut(s) 408
DpnII GATC 1 cut(s) 406
Eco130I CCWWGG 1 cut(s) 571
Eco47I GGWCC 1 cut(s) 575
Eco47III AGCGCT 1 cut(s) 381
Eco88I CYCGRG 2 cut(s) 524, 535
EcoT14I CCWWGG 1 cut(s) 571
EcoT22I ATGCAT 1 cut(s) 563
ErhI CCWWGG 1 cut(s) 571
FaeI CATG 2 cut(s) 599, 794
FaiI YATR 8 cut(s) 193, 238, 423, 447, 597, 630, 708, 792
FatI CATG 2 cut(s) 595, 790
FauI CCCGC 1 cut(s) 214
Fnu4HI GCNGC 6 cut(s) 108, 111, 180, 261, 330, 771
FokI GGATG 4 cut(s) 47, 371, 509, 655
Fsp4HI GCNGC 6 cut(s) 108, 111, 180, 261, 330, 771
FspBI CTAG 4 cut(s) 84, 314, 318, 324
GlaI GCGC 1 cut(s) 381
GluI GCNGC 6 cut(s) 108, 111, 180, 261, 330, 771
GsuI CTGGAG 2 cut(s) 201, 774
HaeII RGCGCY 1 cut(s) 383
HaeIII GGCC 1 cut(s) 42
HapII CCGG 1 cut(s) 418
HhaI GCGC 1 cut(s) 382
Hin1II CATG 2 cut(s) 599, 794
Hin6I GCGC 1 cut(s) 380
HinP1I GCGC 1 cut(s) 380
HinfI GANTC 3 cut(s) 20, 212, 254
HpaII CCGG 1 cut(s) 418
Hpy166II GTNNAC 1 cut(s) 133
Hpy188I TCNGA 3 cut(s) 61, 285, 717
Hpy188III TCNNGA 4 cut(s) 524, 526, 753, 803
Hpy8I GTNNAC 1 cut(s) 133
HpyAV CCTTC 2 cut(s) 656, 715
HpyCH4IV ACGT 1 cut(s) 206
HpyCH4V TGCA 5 cut(s) 110, 164, 173, 260, 561
HpyF10VI GCNNNNNNNGC 3 cut(s) 170, 179, 767
HpyF3I CTNAG 4 cut(s) 183, 333, 354, 686
HpySE526I ACGT 1 cut(s) 206
Hsp92II CATG 2 cut(s) 599, 794
HspAI GCGC 1 cut(s) 380
Kzo9I GATC 1 cut(s) 406
LmnI GCTCC 1 cut(s) 187
LpnPI CCDG 9 cut(s) 41, 74, 78, 231, 431, 475, 479, 738, 759
Lsp1109I GCAGC 5 cut(s) 94, 122, 272, 316, 782
LweI GCATC 4 cut(s) 94, 521, 570, 633
MaeI CTAG 4 cut(s) 84, 314, 318, 324
MaeII ACGT 1 cut(s) 206
MalI GATC 1 cut(s) 408
MboI GATC 1 cut(s) 406
MboII GAAGA 4 cut(s) 165, 475, 730, 789
MluCI AATT 2 cut(s) 120, 814
MlyI GAGTC 1 cut(s) 29
MmeI TCCRAC 2 cut(s) 12, 481
MnlI CCTC 4 cut(s) 178, 531, 749, 799
Mph1103I ATGCAT 1 cut(s) 563
MseI TTAA 1 cut(s) 45
MslI CAYNNNNRTG 1 cut(s) 420
MspA1I CMGCKG 2 cut(s) 221, 773
MspI CCGG 1 cut(s) 418
MvnI CGCG 1 cut(s) 300
MwoI GCNNNNNNNGC 3 cut(s) 170, 179, 767
NdeII GATC 1 cut(s) 406
NheI GCTAGC 1 cut(s) 313
NlaIII CATG 2 cut(s) 599, 794
NlaIV GGNNCC 1 cut(s) 667
NsiI ATGCAT 1 cut(s) 563
PaeR7I CTCGAG 2 cut(s) 524, 535
PfeI GAWTC 2 cut(s) 212, 254
PinAI ACCGGT 1 cut(s) 417
PkrI GCNGC 6 cut(s) 109, 112, 181, 262, 331, 772
PleI GAGTC 1 cut(s) 28
PpsI GAGTC 1 cut(s) 28
PspN4I GGNNCC 1 cut(s) 667
PspPI GGNCC 1 cut(s) 575
PspXI VCTCGAGB 1 cut(s) 535
PsrI GAACNNNNNNTAC 2 cut(s) 649, 681
PstI CTGCAG 2 cut(s) 112, 262
PstNI CAGNNNCTG 1 cut(s) 773
PvuII CAGCTG 1 cut(s) 773
RsaI GTAC 1 cut(s) 569
RsaNI GTAC 1 cut(s) 568
RseI CAYNNNNRTG 1 cut(s) 420
SaqAI TTAA 1 cut(s) 45
SatI GCNGC 6 cut(s) 108, 111, 180, 261, 330, 771
Sau3AI GATC 1 cut(s) 406
Sau96I GGNCC 1 cut(s) 575
SchI GAGTC 1 cut(s) 29
SfaNI GCATC 4 cut(s) 94, 521, 570, 633
SfcI CTRYAG 3 cut(s) 108, 258, 548
Sfr274I CTCGAG 2 cut(s) 524, 535
SinI GGWCC 1 cut(s) 575
SlaI CTCGAG 2 cut(s) 524, 535
SmiMI CAYNNNNRTG 1 cut(s) 420
SmlI CTYRAG 4 cut(s) 266, 524, 535, 803
SmoI CTYRAG 4 cut(s) 266, 524, 535, 803
Sse9I AATT 2 cut(s) 120, 814
SsiI CCGC 4 cut(s) 179, 221, 290, 300
SspMI CTAG 4 cut(s) 84, 314, 318, 324
StyI CCWWGG 1 cut(s) 571
TaiI ACGT 1 cut(s) 209
TaqI TCGA 7 cut(s) 145, 151, 525, 536, 564, 674, 830
TaqII GACCGA 1 cut(s) 592
TasI AATT 2 cut(s) 120, 814
TauI GCSGC 1 cut(s) 182
TfiI GAWTC 2 cut(s) 212, 254
Tru1I TTAA 1 cut(s) 45
Tru9I TTAA 1 cut(s) 45
TscAI CASTG 1 cut(s) 180
TseI GCWGC 5 cut(s) 107, 110, 260, 329, 770
TspDTI ATGAA 1 cut(s) 612
TspRI CASTG 1 cut(s) 180
VpaK11BI GGWCC 1 cut(s) 575
XapI RAATTY 1 cut(s) 120
XcmI CCANNNNNNNNNTGG 1 cut(s) 35
XhoI CTCGAG 2 cut(s) 524, 535
XspI CTAG 4 cut(s) 84, 314, 318, 324
Zsp2I ATGCAT 1 cut(s) 563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.