Rh2BG444700

Short calmodulin-binding motif containing conserved Ile and Gln residues.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000760
Physical Location & Seq
Reverse (-)
62901171 .. 62907198
6028 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG444700.1

Sequence Viewer

Length: 906 bp
ATGGTGGTCCAATCCTCGGTCTCAGCATGGGTGTATGGGATTGTGTCCAAGAGAACGAAGGTGATGTCAAGAACAGTTAGTTTTGAGAACCCCGACTCAAGCAACACCAACAGATCCGATGGCCTAGATACATTGAATGAGAGGGAAACATATGAAGTGATAGTGGCTAGTGGGAAGCTTGTATACAGACAAAGTGGCAACCTTGTGACTACTACTGAGGGTTGCAAATGGATCTTTGTTCTCAGTGCATCGAGGATTATGTATGTTGCGGAAAAGAAGAAAGGCCATTTCCAGCACTCCAGTTTTCTATCCGGAGGTGCCACAATTGCAGCGGGGAGATTAGTTGCTTCTGATGGGGTTCTTGAGGCTGTATGGTGCTACAGTGGTCATTATCGCCCGACAGAAGAGCACTTTTTGGAGTTCATTAGCTTCTTAGAGGAGCAACAGGTGGACTTGACAAATGTCAAAAAACATCCTATAGATGATGATATTCCACCTTCAGAATCTACCAGTAAAGATACGAGCACCCTTGAGGATATCCCATCGGCAAACATTGAGACGAGTACTAATGAAAATGAGCGTGCCGTTGACGCTTCCATAGTAAGTGATGACAATCAAGACATTGTGGAAGCACCAAAATTTGACTCGGGATCAGGGGGATTGCCTTGCAAATGGACTACAGGAGCTGGTCCTCGAATCGGATGTGTGAGAGACTACCCCACACGGCTGCAATTTCAGGCACTTGAGCAAGTCAATCTGTCACCGAGAATCAAACCAGAACGCACTGCAAGCAATAACACCCCAGTGCCTTCACCAAGACCTAGTCCCAAGTTCCACTTATCACCTAGACTTGCATATATGGGACTTCCTAGCCCCAGAAGATTGCATAATTTGACTCCTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

301

Amino Acids

33.2

Weight (kDa)

6.01

Isoelectric Point (pI)

42.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 317
AccI GTMKAC 1 cut(s) 183
AccIII TCCGGA 1 cut(s) 311
AciI CCGC 2 cut(s) 269, 332
AclWI GGATC 3 cut(s) 108, 239, 658
AcsI RAATTY 1 cut(s) 638
AcuI CTGAAG 1 cut(s) 483
AfaI GTAC 1 cut(s) 565
AfiI CCNNNNNNNGG 2 cut(s) 16, 698
AgsI TTSAA 1 cut(s) 136
AleI CACNNNNGTG 1 cut(s) 803
AluBI AGCT 3 cut(s) 178, 429, 686
AluI AGCT 3 cut(s) 178, 429, 686
Alw21I GWGCWC 2 cut(s) 411, 527
Alw26I GTCTC 3 cut(s) 25, 551, 705
AlwI GGATC 3 cut(s) 108, 239, 658
AlwNI CAGNNNCTG 1 cut(s) 686
Ama87I CYCGRG 1 cut(s) 646
Aor13HI TCCGGA 1 cut(s) 311
AoxI GGCC 2 cut(s) 121, 283
ApeKI GCWGC 2 cut(s) 329, 727
ApoI RAATTY 1 cut(s) 638
ArsI GACNNNNNNTTYG 2 cut(s) 50, 82
AspS9I GGNCC 2 cut(s) 7, 689
AsuHPI GGTGA 4 cut(s) 73, 753, 804, 834
AvaI CYCGRG 1 cut(s) 646
AvaII GGWCC 2 cut(s) 7, 689
BanI GGYRCC 1 cut(s) 317
BarI GAAGNNNNNNTAC 2 cut(s) 167, 199
Bbv12I GWGCWC 2 cut(s) 411, 527
BbvI GCAGC 2 cut(s) 341, 714
BccI CCATC 3 cut(s) 113, 347, 550
BceAI ACGGC 2 cut(s) 569, 740
BcoDI GTCTC 3 cut(s) 25, 551, 705
BfaI CTAG 5 cut(s) 125, 168, 822, 846, 870
BfmI CTRYAG 3 cut(s) 379, 477, 678
BisI GCNGC 2 cut(s) 330, 728
BlsI GCNGC 2 cut(s) 331, 729
BmcAI AGTACT 1 cut(s) 565
Bme18I GGWCC 2 cut(s) 7, 689
BmeT110I CYCGRG 1 cut(s) 646
BmgT120I GGNCC 2 cut(s) 7, 689
BmiI GGNNCC 1 cut(s) 319
BmrI ACTGGG 1 cut(s) 797
BmsI GCATC 1 cut(s) 257
BmuI ACTGGG 1 cut(s) 797
BoxI GACNNNNGTC 1 cut(s) 461
BpmI CTGGAG 1 cut(s) 283
BpuEI CTTGAG 4 cut(s) 82, 383, 551, 764
BsaBI GATNNNNATC 1 cut(s) 612
BsaI GGTCTC 1 cut(s) 25
BsaJI CCNNGG 1 cut(s) 15
BsaWI WCCGGW 1 cut(s) 311
Bsc4I CCNNNNNNNGG 2 cut(s) 16, 698
Bse1I ACTGG 3 cut(s) 300, 510, 803
Bse8I GATNNNNATC 1 cut(s) 612
BseAI TCCGGA 1 cut(s) 311
BseDI CCNNGG 1 cut(s) 15
BseGI GGATG 2 cut(s) 472, 707
BseJI GATNNNNATC 1 cut(s) 612
BseLI CCNNNNNNNGG 2 cut(s) 16, 698
BseMII CTCAG 3 cut(s) 36, 207, 256
BseNI ACTGG 3 cut(s) 300, 510, 803
BseRI GAGGAG 2 cut(s) 452, 888
BseXI GCAGC 2 cut(s) 341, 714
BshFI GGCC 2 cut(s) 123, 285
BshNI GGYRCC 1 cut(s) 317
BsiHKAI GWGCWC 2 cut(s) 411, 527
BsiHKCI CYCGRG 1 cut(s) 646
BsiSI CCGG 1 cut(s) 312
BslFI GGGAC 2 cut(s) 810, 876
BslI CCNNNNNNNGG 2 cut(s) 16, 698
BsmAI GTCTC 3 cut(s) 25, 551, 705
BsmBI CGTCTC 1 cut(s) 551
BsmFI GGGAC 2 cut(s) 810, 876
BsnI GGCC 2 cut(s) 123, 285
Bso31I GGTCTC 1 cut(s) 25
BsoBI CYCGRG 1 cut(s) 646
Bsp1286I GDGCHC 2 cut(s) 411, 527
Bsp13I TCCGGA 1 cut(s) 311
Bsp143I GATC 3 cut(s) 113, 231, 650
BspACI CCGC 2 cut(s) 269, 332
BspANI GGCC 2 cut(s) 123, 285
BspCNI CTCAG 3 cut(s) 35, 208, 255
BspEI TCCGGA 1 cut(s) 311
BspLI GGNNCC 1 cut(s) 319
BspPI GGATC 3 cut(s) 108, 239, 658
BspQI GCTCTTC 1 cut(s) 399
BspT107I GGYRCC 1 cut(s) 317
BspTNI GGTCTC 1 cut(s) 25
BsrI ACTGG 3 cut(s) 300, 510, 803
BssECI CCNNGG 1 cut(s) 15
BssMI GATC 3 cut(s) 113, 231, 650
BssNAI GTATAC 1 cut(s) 184
Bst1107I GTATAC 1 cut(s) 184
Bst4CI ACNGT 2 cut(s) 76, 383
Bst6I CTCTTC 1 cut(s) 399
BstC8I GCNNGC 2 cut(s) 582, 790
BstDEI CTNAG 5 cut(s) 22, 216, 242, 433, 903
BstF5I GGATG 2 cut(s) 472, 707
BstKTI GATC 3 cut(s) 116, 234, 653
BstMAI GTCTC 3 cut(s) 25, 551, 705
BstMBI GATC 3 cut(s) 113, 231, 650
BstMWI GCNNNNNNNGC 3 cut(s) 326, 590, 789
BstPAI GACNNNNGTC 1 cut(s) 461
BstSFI CTRYAG 3 cut(s) 379, 477, 678
BstV1I GCAGC 2 cut(s) 341, 714
BstX2I RGATCY 2 cut(s) 113, 231
BstYI RGATCY 2 cut(s) 113, 231
BstZ17I GTATAC 1 cut(s) 184
BsuRI GGCC 2 cut(s) 123, 285
BtsCI GGATG 2 cut(s) 472, 707
BtsI GCAGTG 1 cut(s) 783
BtsIMutI CAGTG 4 cut(s) 250, 388, 783, 810
Cac8I GCNNGC 2 cut(s) 582, 790
CaiI CAGNNNCTG 1 cut(s) 686
Cfr13I GGNCC 2 cut(s) 7, 689
CseI GACGC 1 cut(s) 599
Csp6I GTAC 1 cut(s) 564
CviAII CATG 1 cut(s) 27
CviJI RGCY 9 cut(s) 123, 167, 178, 285, 368, 429, 686, 727, 873
CviKI_1 RGCY 9 cut(s) 123, 167, 178, 285, 368, 429, 686, 727, 873
CviQI GTAC 1 cut(s) 564
DdeI CTNAG 5 cut(s) 22, 216, 242, 433, 903
DpnI GATC 3 cut(s) 115, 233, 652
DpnII GATC 3 cut(s) 113, 231, 650
Eam1104I CTCTTC 1 cut(s) 399
EarI CTCTTC 1 cut(s) 399
Eco31I GGTCTC 1 cut(s) 25
Eco32I GATATC 1 cut(s) 538
Eco47I GGWCC 2 cut(s) 7, 689
Eco57I CTGAAG 1 cut(s) 483
Eco88I CYCGRG 1 cut(s) 646
EcoRV GATATC 1 cut(s) 538
Esp3I CGTCTC 1 cut(s) 551
FaeI CATG 1 cut(s) 30
FalI AAGNNNNNCTT 2 cut(s) 821, 853
FaqI GGGAC 2 cut(s) 810, 876
FatI CATG 1 cut(s) 26
FauI CCCGC 1 cut(s) 325
FauNDI CATATG 1 cut(s) 151
FblI GTMKAC 1 cut(s) 183
Fnu4HI GCNGC 2 cut(s) 330, 728
FokI GGATG 2 cut(s) 459, 714
Fsp4HI GCNGC 2 cut(s) 330, 728
FspBI CTAG 5 cut(s) 125, 168, 822, 846, 870
GluI GCNGC 2 cut(s) 330, 728
GsuI CTGGAG 1 cut(s) 283
HaeIII GGCC 2 cut(s) 123, 285
HapII CCGG 1 cut(s) 312
HgaI GACGC 1 cut(s) 599
Hin1II CATG 1 cut(s) 30
HincII GTYRAC 1 cut(s) 589
HindII GTYRAC 1 cut(s) 589
HindIII AAGCTT 1 cut(s) 176
HinfI GANTC 6 cut(s) 95, 503, 644, 696, 768, 895
HpaII CCGG 1 cut(s) 312
HphI GGTGA 4 cut(s) 73, 753, 804, 834
Hpy166II GTNNAC 3 cut(s) 184, 451, 589
Hpy188I TCNGA 4 cut(s) 118, 352, 502, 701
Hpy188III TCNNGA 5 cut(s) 69, 312, 362, 617, 648
Hpy8I GTNNAC 3 cut(s) 184, 451, 589
HpyAV CCTTC 3 cut(s) 52, 507, 819
HpyCH4III ACNGT 2 cut(s) 76, 383
HpyCH4V TGCA 8 cut(s) 225, 248, 329, 669, 730, 788, 854, 886
HpyF10VI GCNNNNNNNGC 3 cut(s) 326, 590, 789
HpyF3I CTNAG 5 cut(s) 22, 216, 242, 433, 903
Hsp92II CATG 1 cut(s) 30
Kpn2I TCCGGA 1 cut(s) 311
Kzo9I GATC 3 cut(s) 113, 231, 650
LguI GCTCTTC 1 cut(s) 399
LmnI GCTCC 2 cut(s) 439, 683
Lsp1109I GCAGC 2 cut(s) 341, 714
LweI GCATC 1 cut(s) 257
MaeI CTAG 5 cut(s) 125, 168, 822, 846, 870
MaeIII GTNAC 2 cut(s) 205, 759
MalI GATC 3 cut(s) 115, 233, 652
MboI GATC 3 cut(s) 113, 231, 650
MboII GAAGA 3 cut(s) 289, 416, 891
MfeI CAATTG 1 cut(s) 324
MflI RGATCY 2 cut(s) 113, 231
MhlI GDGCHC 2 cut(s) 411, 527
MluCI AATT 4 cut(s) 324, 638, 731, 889
MlyI GAGTC 3 cut(s) 89, 638, 889
MnlI CCTC 9 cut(s) 25, 135, 211, 246, 308, 358, 430, 526, 702
MroI TCCGGA 1 cut(s) 311
MslI CAYNNNNRTG 1 cut(s) 803
MspA1I CMGCKG 1 cut(s) 332
MspI CCGG 1 cut(s) 312
MunI CAATTG 1 cut(s) 324
MwoI GCNNNNNNNGC 3 cut(s) 326, 590, 789
NdeI CATATG 1 cut(s) 151
NdeII GATC 3 cut(s) 113, 231, 650
NlaIII CATG 1 cut(s) 30
NlaIV GGNNCC 1 cut(s) 319
NmuCI GTSAC 2 cut(s) 205, 759
OliI CACNNNNGTG 1 cut(s) 803
PciSI GCTCTTC 1 cut(s) 399
PfeI GAWTC 3 cut(s) 503, 696, 768
PflFI GACNNNGTC 1 cut(s) 822
PkrI GCNGC 2 cut(s) 331, 729
PleI GAGTC 3 cut(s) 89, 638, 889
PpsI GAGTC 3 cut(s) 89, 638, 889
PshAI GACNNNNGTC 1 cut(s) 461
PspN4I GGNNCC 1 cut(s) 319
PspPI GGNCC 2 cut(s) 7, 689
PstNI CAGNNNCTG 1 cut(s) 686
PsuI RGATCY 2 cut(s) 113, 231
PsyI GACNNNGTC 1 cut(s) 822
RsaI GTAC 1 cut(s) 565
RsaNI GTAC 1 cut(s) 564
RseI CAYNNNNRTG 1 cut(s) 803
SapI GCTCTTC 1 cut(s) 399
SatI GCNGC 2 cut(s) 330, 728
Sau3AI GATC 3 cut(s) 113, 231, 650
Sau96I GGNCC 2 cut(s) 7, 689
ScaI AGTACT 1 cut(s) 565
SchI GAGTC 3 cut(s) 89, 638, 889
SduI GDGCHC 2 cut(s) 411, 527
SfaNI GCATC 1 cut(s) 257
SfcI CTRYAG 3 cut(s) 379, 477, 678
SinI GGWCC 2 cut(s) 7, 689
SmiMI CAYNNNNRTG 1 cut(s) 803
SmlI CTYRAG 4 cut(s) 97, 362, 530, 743
SmoI CTYRAG 4 cut(s) 97, 362, 530, 743
Sse9I AATT 4 cut(s) 324, 638, 731, 889
SsiI CCGC 2 cut(s) 269, 332
SspMI CTAG 5 cut(s) 125, 168, 822, 846, 870
TaaI ACNGT 2 cut(s) 76, 383
TaqI TCGA 2 cut(s) 251, 694
TaqII GACCGA 1 cut(s) 7
TasI AATT 4 cut(s) 324, 638, 731, 889
TatI WGTACW 1 cut(s) 563
TfiI GAWTC 3 cut(s) 503, 696, 768
TscAI CASTG 4 cut(s) 250, 388, 790, 810
TseFI GTSAC 2 cut(s) 205, 759
TseI GCWGC 2 cut(s) 329, 727
Tsp45I GTSAC 2 cut(s) 205, 759
TspDTI ATGAA 3 cut(s) 168, 412, 585
TspRI CASTG 4 cut(s) 250, 388, 790, 810
Tth111I GACNNNGTC 1 cut(s) 822
VpaK11BI GGWCC 2 cut(s) 7, 689
XapI RAATTY 1 cut(s) 638
XmiI GTMKAC 1 cut(s) 183
XspI CTAG 5 cut(s) 125, 168, 822, 846, 870
ZrmI AGTACT 1 cut(s) 565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.