RchiOBHm_Chr5g0005511

Calmodulin-binding protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
3540346 .. 3548598
8253 bp
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UTR
Exon/CDS
Intron
PRQ28672

Sequence Viewer

Length: 147 bp
ATGATGCAGCAGTCAAAGGAGCTTAATGATGCAGTAGTCAAAGTTCAGAAGGTTTACAAGAGTTATCGAACTCGAAGAAACCTTGCAGATTGTGCAGTGGTGGCTGAGGAGGCGGAGATACTCATTAGATTCTCCGGCTGGTACTAA

Protein Analysis

48

Amino Acids

5.64

Weight (kDa)

8.93

Isoelectric Point (pI)

41.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 113
AfaI GTAC 1 cut(s) 143
AluBI AGCT 1 cut(s) 22
AluI AGCT 1 cut(s) 22
ApeKI GCWGC 1 cut(s) 7
BbvCI CCTCAGC 1 cut(s) 105
BbvI GCAGC 1 cut(s) 19
BisI GCNGC 1 cut(s) 8
BlsI GCNGC 1 cut(s) 9
BmsI GCATC 1 cut(s) 19
Bpu10I CCTNAGC 1 cut(s) 105
BseMII CTCAG 1 cut(s) 96
BseRI GAGGAG 1 cut(s) 122
BseXI GCAGC 1 cut(s) 19
BsgI GTGCAG 1 cut(s) 114
BsiSI CCGG 1 cut(s) 135
BspACI CCGC 1 cut(s) 113
BspCNI CTCAG 1 cut(s) 97
BstAPI GCANNNNNTGC 1 cut(s) 92
BstDEI CTNAG 1 cut(s) 105
BstMWI GCNNNNNNNGC 3 cut(s) 92, 101, 110
BstV1I GCAGC 1 cut(s) 19
BtsI GCAGTG 1 cut(s) 102
BtsIMutI CAGTG 1 cut(s) 102
Csp6I GTAC 1 cut(s) 142
CviJI RGCY 3 cut(s) 22, 104, 138
CviKI_1 RGCY 3 cut(s) 22, 104, 138
CviQI GTAC 1 cut(s) 142
DdeI CTNAG 1 cut(s) 105
EciI GGCGGA 1 cut(s) 128
Fnu4HI GCNGC 1 cut(s) 8
Fsp4HI GCNGC 1 cut(s) 8
GluI GCNGC 1 cut(s) 8
HapII CCGG 1 cut(s) 135
HinfI GANTC 1 cut(s) 129
HpaII CCGG 1 cut(s) 135
Hpy166II GTNNAC 1 cut(s) 55
Hpy188I TCNGA 1 cut(s) 48
Hpy8I GTNNAC 1 cut(s) 55
HpyAV CCTTC 1 cut(s) 43
HpyCH4V TGCA 4 cut(s) 7, 32, 86, 95
HpyF10VI GCNNNNNNNGC 3 cut(s) 92, 101, 110
HpyF3I CTNAG 1 cut(s) 105
LmnI GCTCC 1 cut(s) 19
LpnPI CCDG 1 cut(s) 124
Lsp1109I GCAGC 1 cut(s) 19
LweI GCATC 1 cut(s) 19
MboII GAAGA 1 cut(s) 87
MnlI CCTC 2 cut(s) 100, 103
MseI TTAA 1 cut(s) 24
MspI CCGG 1 cut(s) 135
MwoI GCNNNNNNNGC 3 cut(s) 92, 101, 110
PfeI GAWTC 1 cut(s) 129
PkrI GCNGC 1 cut(s) 9
PsrI GAACNNNNNNTAC 2 cut(s) 27, 59
RsaI GTAC 1 cut(s) 143
RsaNI GTAC 1 cut(s) 142
SaqAI TTAA 1 cut(s) 24
SatI GCNGC 1 cut(s) 8
SetI ASST 3 cut(s) 24, 54, 84
SfaNI GCATC 1 cut(s) 19
SgeI CNNG 3 cut(s) 70, 84, 95
SsiI CCGC 1 cut(s) 113
TaqI TCGA 2 cut(s) 67, 73
TfiI GAWTC 1 cut(s) 129
Tru1I TTAA 1 cut(s) 24
Tru9I TTAA 1 cut(s) 24
TscAI CASTG 1 cut(s) 102
TseI GCWGC 1 cut(s) 7
TspRI CASTG 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.